Guide to the Human Genome
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Name: FOXH1 Sequence: fasta or formatted (365aa) NCBI GI: 4503657
Description:

forkhead box H1

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         30           2
 C cysteine            2.2          8           1
 D aspartate           2.7         10           1
 E glutamate           3.8         14           2
 F phenylalanine       2.2          8           2
 G glycine             9.9         36           2
 H histidine           1.6          6           1
 I isoleucine          2.7         10           2
 K lysine              3.6         13           2
 L leucine             9.9         36           2
 M methionine          0.8          3           1
 N asparagine          2.2          8           1
 P proline            16.4         60           5
 Q glutamine           3.8         14           1
 R arginine            6.8         25           2
 S serine              8.8         32           2
 T threonine           3.6         13           1
 V valine              4.9         18           2
 W tryptophan          3.0         11           1
 Y tyrosine            2.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box H1 
FOXE3                 0.123   forkhead box E3 
FOXD1                 0.111   forkhead box D1 
FOXQ1                 0.110   forkhead box Q1 
FOXC2                 0.107   forkhead box C2 
FOXE1                 0.107   forkhead box E1 
FOXF2                 0.106   forkhead box F2 
FOXD2                 0.106   forkhead box D2 
FOXF1                 0.104   forkhead box F1 
FOXC1                 0.103   forkhead box C1 
FOXA1                 0.102   forkhead box A1 
FOXA3                 0.099   forkhead box A3 
FOXS1                 0.095   forkhead box S1 
FOXI2                 0.094   forkhead box I2 
FOXD3                 0.094   forkhead box D3 
FOXL2                 0.093   forkhead box L2 
FOXA2                 0.093   forkhead box A2 isoform 2 
FOXA2                 0.093   forkhead box A2 isoform 1 
FOXD4L3               0.090   forkhead box D4-like 3 
FOXD4L2               0.090   forkhead box D4-like 2 
FOXD4L5               0.090   forkhead box D4-like 5 
FOXD4L6               0.090   forkhead box D4-like 6 
FOXD4L4               0.090   forkhead box D4-like 4 
FOXI1                 0.089   forkhead box I1 isoform a 
FOXI3                 0.089   forkhead box I3 
FOXD4                 0.089   forkhead box D4 
FOXL1                 0.089   forkhead box L1 
FOXD4L1               0.087   forkhead box D4-like 1 
LOC651986             0.087   PREDICTED: similar to forkhead box L2 
FOXK1                 0.086   forkhead box K1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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