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Search of human proteins with 239750284
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750284 PREDICTED: hypothetical protein XP_002347343 [Homo
sapiens]
(76 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755782 PREDICTED: hypothetical protein XP_002344710 [Homo ... 164 1e-41
gi|239750284 PREDICTED: hypothetical protein XP_002347343 [Homo ... 164 1e-41
gi|239744593 PREDICTED: hypothetical protein XP_002343230 [Homo ... 164 1e-41
gi|198041734 kinesin light chain 2 isoform 1 [Homo sapiens] 36 0.008
gi|198041731 kinesin light chain 2 isoform 1 [Homo sapiens] 36 0.008
gi|198041728 kinesin light chain 2 isoform 2 [Homo sapiens] 36 0.008
gi|12383062 kinesin light chain 2 isoform 1 [Homo sapiens] 36 0.008
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 35 0.017
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 34 0.022
gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens] 34 0.022
gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens] 34 0.022
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 34 0.022
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 33 0.038
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 33 0.038
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens] 33 0.038
gi|48762934 alpha 2 type I collagen [Homo sapiens] 33 0.065
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 33 0.065
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 33 0.065
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 33 0.065
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 33 0.065
gi|50511941 EMI domain containing 1 [Homo sapiens] 33 0.065
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 32 0.084
gi|11386161 alpha 2 type IX collagen [Homo sapiens] 32 0.084
gi|194353970 alpha-2A-adrenergic receptor [Homo sapiens] 32 0.11
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 32 0.11
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 32 0.11
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 32 0.11
gi|41281612 zinc finger protein 828 [Homo sapiens] 32 0.11
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 32 0.14
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 32 0.14
>gi|239755782 PREDICTED: hypothetical protein XP_002344710 [Homo
sapiens]
Length = 76
Score = 164 bits (416), Expect = 1e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG
Sbjct: 1 MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
Query: 61 WGGPAPPRLPRRPNLL 76
WGGPAPPRLPRRPNLL
Sbjct: 61 WGGPAPPRLPRRPNLL 76
>gi|239750284 PREDICTED: hypothetical protein XP_002347343 [Homo
sapiens]
Length = 76
Score = 164 bits (416), Expect = 1e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG
Sbjct: 1 MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
Query: 61 WGGPAPPRLPRRPNLL 76
WGGPAPPRLPRRPNLL
Sbjct: 61 WGGPAPPRLPRRPNLL 76
>gi|239744593 PREDICTED: hypothetical protein XP_002343230 [Homo
sapiens]
Length = 76
Score = 164 bits (416), Expect = 1e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG
Sbjct: 1 MRTSFPHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
Query: 61 WGGPAPPRLPRRPNLL 76
WGGPAPPRLPRRPNLL
Sbjct: 61 WGGPAPPRLPRRPNLL 76
>gi|198041734 kinesin light chain 2 isoform 1 [Homo sapiens]
Length = 622
Score = 35.8 bits (81), Expect = 0.008
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 8 AGPRRQRGPEGA------RREGSDSPRR-GSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
AGPR + E +GS S RR GS G+L +SS+ L ++GG PQE P
Sbjct: 515 AGPRSESDLEDVGPTAEWNGDGSGSLRRSGSFGKLRDALRRSSEMLVKKLQGGTPQEPPN 574
Query: 61 WGGPAPPRLPRRPNL 75
PR+ R +L
Sbjct: 575 ------PRMKRASSL 583
>gi|198041731 kinesin light chain 2 isoform 1 [Homo sapiens]
Length = 622
Score = 35.8 bits (81), Expect = 0.008
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 8 AGPRRQRGPEGA------RREGSDSPRR-GSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
AGPR + E +GS S RR GS G+L +SS+ L ++GG PQE P
Sbjct: 515 AGPRSESDLEDVGPTAEWNGDGSGSLRRSGSFGKLRDALRRSSEMLVKKLQGGTPQEPPN 574
Query: 61 WGGPAPPRLPRRPNL 75
PR+ R +L
Sbjct: 575 ------PRMKRASSL 583
>gi|198041728 kinesin light chain 2 isoform 2 [Homo sapiens]
Length = 545
Score = 35.8 bits (81), Expect = 0.008
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 8 AGPRRQRGPEGA------RREGSDSPRR-GSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
AGPR + E +GS S RR GS G+L +SS+ L ++GG PQE P
Sbjct: 438 AGPRSESDLEDVGPTAEWNGDGSGSLRRSGSFGKLRDALRRSSEMLVKKLQGGTPQEPPN 497
Query: 61 WGGPAPPRLPRRPNL 75
PR+ R +L
Sbjct: 498 ------PRMKRASSL 506
>gi|12383062 kinesin light chain 2 isoform 1 [Homo sapiens]
Length = 622
Score = 35.8 bits (81), Expect = 0.008
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 8 AGPRRQRGPEGA------RREGSDSPRR-GSVGELAPEPNKSSQRLAHPVEGGRPQESPG 60
AGPR + E +GS S RR GS G+L +SS+ L ++GG PQE P
Sbjct: 515 AGPRSESDLEDVGPTAEWNGDGSGSLRRSGSFGKLRDALRRSSEMLVKKLQGGTPQEPPN 574
Query: 61 WGGPAPPRLPRRPNL 75
PR+ R +L
Sbjct: 575 ------PRMKRASSL 583
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 34.7 bits (78), Expect = 0.017
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPA 65
PH G P+G + PR G P P +Q P G+P+ P GG
Sbjct: 178 PHPGKPEGPPPQGGNQSQGPPPRPGKPE--GPPPQGGNQSQGPPPRPGKPEGPPSQGGNK 235
Query: 66 PPRLPRRP 73
P P P
Sbjct: 236 PQGPPPHP 243
Score = 33.1 bits (74), Expect = 0.050
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 16 PEGARREGSDSPRRGSVGELAPE---PNKSSQRLAHPVEGGRPQESPGWGG---PAPPRL 69
PEG R +G + P+R PE P +Q P G+P+ P GG PP
Sbjct: 36 PEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 95
Query: 70 PRRP 73
P +P
Sbjct: 96 PGKP 99
Score = 32.7 bits (73), Expect = 0.065
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGG-- 63
P G R P+G + PR G P P +Q P G+P+ P GG
Sbjct: 52 PPPGKPEGRPPQGGNQSQGPPPRPGKPE--GPPPQGGNQSQGPPPRPGKPEGQPPQGGNQ 109
Query: 64 -PAPPRLPRRP 73
PP P +P
Sbjct: 110 SQGPPPRPGKP 120
Score = 32.3 bits (72), Expect = 0.084
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
Query: 10 PRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG---GPAP 66
P R PEG +G + P+ P P+ + P EG +PQ P G GP P
Sbjct: 219 PPRPGKPEGPPSQGGNKPQ-------GPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPP 271
Query: 67 P 67
P
Sbjct: 272 P 272
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGG-- 63
P G + P+G + PR G P P +Q P G+P+ P GG
Sbjct: 94 PRPGKPEGQPPQGGNQSQGPPPRPGKPE--GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 151
Query: 64 -PAPPRLPRRP 73
PP P +P
Sbjct: 152 SQGPPPRPGKP 162
Score = 30.4 bits (67), Expect = 0.32
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGG-- 63
P G P+G + PR G P P +Q P G+P+ P GG
Sbjct: 136 PRPGKPEGPPPQGGNQSQGPPPRPGKPE--GPPPQGGNQSQGPPPHPGKPEGPPPQGGNQ 193
Query: 64 -PAPPRLPRRP 73
PP P +P
Sbjct: 194 SQGPPPRPGKP 204
Score = 30.0 bits (66), Expect = 0.42
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESP 59
P G + QR P R +G P G+ + P P Q P +GGRP P
Sbjct: 251 PQEGNKPQRPPPPGRPQGPPPPG-GNPQQPLPPPAGKPQGPPPPPQGGRPHRPP 303
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/72 (38%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGR----PQESPGWGGP 64
GPR QRGP G R E RG G+ P+ N A P G R PQ G+ GP
Sbjct: 907 GPRGQRGPTGPRGERGP---RGITGKPGPKGNSGGDGPAGP-PGERGPNGPQGPTGFPGP 962
Query: 65 -APPRLPRRPNL 75
PP P + L
Sbjct: 963 KGPPGPPGKDGL 974
Score = 28.9 bits (63), Expect = 0.93
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 8 AGPRRQRGPEGARREGSDSPRRGSVGELAPE--PNKSS----QRLAHPV-EGGRPQESPG 60
AGP ++G +GA+ E G G + P+ P K + + PV E G P SPG
Sbjct: 1398 AGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP-GSPG 1456
Query: 61 WGGP----APPRLP 70
GP PP LP
Sbjct: 1457 PDGPPGPMGPPGLP 1470
Score = 25.8 bits (55), Expect = 7.9
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPPR 68
GPR + GPEG + G + G G L P K +L P G P G P
Sbjct: 835 GPRGEDGPEGPKGRGGPN---GDPGPLGPPGEKG--KLGVPGLPGYPGRQGPKGSIGFPG 889
Query: 69 LP 70
P
Sbjct: 890 FP 891
>gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]
Length = 654
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPPR 68
GP+ + G +G + + ++ +G GE + ++ P E GRP + G P P
Sbjct: 276 GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQK---GEPGLPG 332
Query: 69 LPRRPNL 75
LP P +
Sbjct: 333 LPGLPGI 339
Score = 25.8 bits (55), Expect = 7.9
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 25/89 (28%)
Query: 8 AGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQ-----RLAHP------------- 49
AGP +RG G R E + G G P+ +K Q R+ P
Sbjct: 122 AGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQL 181
Query: 50 -----VEGGRPQESPGWGGPAPPRLPRRP 73
++G + Q P G P PP PR P
Sbjct: 182 IKRRLIKGDQGQAGPP-GPPGPPG-PRGP 208
>gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens]
Length = 642
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPPR 68
GP+ + G +G + + ++ +G GE + ++ P E GRP + G P P
Sbjct: 276 GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQK---GEPGLPG 332
Query: 69 LPRRPNL 75
LP P +
Sbjct: 333 LPGLPGI 339
Score = 25.8 bits (55), Expect = 7.9
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 25/89 (28%)
Query: 8 AGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQ-----RLAHP------------- 49
AGP +RG G R E + G G P+ +K Q R+ P
Sbjct: 122 AGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQL 181
Query: 50 -----VEGGRPQESPGWGGPAPPRLPRRP 73
++G + Q P G P PP PR P
Sbjct: 182 IKRRLIKGDQGQAGPP-GPPGPPG-PRGP 208
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 34.3 bits (77), Expect = 0.022
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGG-- 63
P G R P+G + P G P P +Q P G+P+ P GG
Sbjct: 73 PPPGKPEGRPPQGGNQSQGPPPHPGKPER--PPPQGGNQSQGTPPPPGKPERPPPQGGNQ 130
Query: 64 ----PAPPRLPRRP 73
P PP P RP
Sbjct: 131 SHRPPPPPGKPERP 144
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 9/67 (13%)
Query: 16 PEGARREGSDSPRRGSVGELAPE---PNKSSQRLAHPVEGGRPQESPGWGG------PAP 66
PEG R +G + P+R P+ P +Q P G+P+ P GG P
Sbjct: 36 PEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPH 95
Query: 67 PRLPRRP 73
P P RP
Sbjct: 96 PGKPERP 102
Score = 31.2 bits (69), Expect = 0.19
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGG-- 63
PH G + P+G + P G P+ S R P G+P+ P GG
Sbjct: 94 PHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHR--PPPPPGKPERPPPQGGNQ 151
Query: 64 -PAPPRLPRRP 73
PP P +P
Sbjct: 152 SQGPPPHPGKP 162
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 33.5 bits (75), Expect = 0.038
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 5 FPHAGPRRQRGPEGARREGSDSPRRGSV-GELAP-EPNKSSQRLAHPVEG-GRPQESPGW 61
F + RR+R G +REG PR G G P EP + RLA G G P P
Sbjct: 415 FENGNYRRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGREPP- 473
Query: 62 GGPAPP 67
PAPP
Sbjct: 474 ASPAPP 479
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 33.5 bits (75), Expect = 0.038
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 5 FPHAGPRRQRGPEGARREGSDSPRRGSV-GELAP-EPNKSSQRLAHPVEG-GRPQESPGW 61
F + RR+R G +REG PR G G P EP + RLA G G P P
Sbjct: 478 FENGNYRRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGREPP- 536
Query: 62 GGPAPP 67
PAPP
Sbjct: 537 ASPAPP 542
>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 387
Score = 33.5 bits (75), Expect = 0.038
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 5 FPHAGPRRQRGPEGARREGSDSPRRGSV-GELAP-EPNKSSQRLAHPVEG-GRPQESPGW 61
F + RR+R G +REG PR G G P EP + RLA G G P P
Sbjct: 182 FENGNYRRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGREPP- 240
Query: 62 GGPAPP 67
PAPP
Sbjct: 241 ASPAPP 246
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 32.7 bits (73), Expect = 0.065
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPPR 68
GPR GP+G R + + +G G + + Q L Q +PG GPA PR
Sbjct: 994 GPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPR 1053
Query: 69 LPRRPN 74
P P+
Sbjct: 1054 GPAGPS 1059
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 8 AGPRRQRGPEGARREGSDSP-----RRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG 62
AGPR +RGP G G+ P RG G P+ NK + V P G
Sbjct: 585 AGPRGERGPPG--ESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLP 642
Query: 63 G 63
G
Sbjct: 643 G 643
Score = 26.9 bits (58), Expect = 3.5
Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNK-SSQRLAHPVEGGRPQESPGWGGPAPP 67
GPR GP GA + RG VGE P +K S P G PQ PG G
Sbjct: 325 GPRGIPGPVGA---AGATGARGLVGEPGPAGSKGESGNKGEPGSAG-PQGPPGPSGEEGK 380
Query: 68 RLP 70
R P
Sbjct: 381 RGP 383
Score = 26.6 bits (57), Expect = 4.6
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 9 GPRRQRGPEG-ARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPP 67
GPR +RGP G R+G D P P P A +G PG G P
Sbjct: 39 GPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGP 98
Query: 68 RLP 70
R P
Sbjct: 99 RGP 101
Score = 26.2 bits (56), Expect = 6.1
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGG-PAP 66
G R GP G R D+ R G G + P S P P PG G P P
Sbjct: 421 GSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGP 479
Score = 25.8 bits (55), Expect = 7.9
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 8/62 (12%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPPR 68
GP RGP G R G G + P + Q H G P G P PP
Sbjct: 1048 GPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQ--GHQGPAGPP------GPPGPPG 1099
Query: 69 LP 70
P
Sbjct: 1100 PP 1101
>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 32.7 bits (73), Expect = 0.065
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 16 PEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPPRLPRRPNL 75
P G GS S +G PE +S + A P + P + PA P+LPRRP
Sbjct: 46 PAGMPGGGSGSDTKGGGSPATPEDPRSPAKPAAPEDPQMPAQ------PALPQLPRRPRT 99
Query: 76 L 76
L
Sbjct: 100 L 100
>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 32.7 bits (73), Expect = 0.065
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 16 PEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPPRLPRRPNL 75
P G GS S +G PE +S + A P + P + PA P+LPRRP
Sbjct: 46 PAGMPGGGSGSDTKGGGSPATPEDPRSPAKPAAPEDPQMPAQ------PALPQLPRRPRT 99
Query: 76 L 76
L
Sbjct: 100 L 100
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 32.7 bits (73), Expect = 0.065
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 9 GPRRQRGPEGARREG--SDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG---- 62
GP P+G +G S SPR P P +Q P G+PQ P G
Sbjct: 91 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 150
Query: 63 -GPAPPRLPRRP 73
GP PP P+ P
Sbjct: 151 QGPPPPGKPQGP 162
Score = 30.8 bits (68), Expect = 0.25
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 10 PRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG-----GP 64
P + +GP S S R P P +Q P G+PQ P G GP
Sbjct: 218 PGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 277
Query: 65 APPRLPRRP 73
PP P+ P
Sbjct: 278 PPPGKPQGP 286
Score = 30.4 bits (67), Expect = 0.32
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 9 GPRRQRGPEGARREGSDSPR--RGSVGE-LAPEPNKSSQRLAHPVEGGRPQESPGWG--- 62
GP P+G +G + R R G+ P P +Q P G+PQ P G
Sbjct: 152 GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 211
Query: 63 --GPAPPRLPRRP 73
GP PP P+ P
Sbjct: 212 PQGPPPPGKPQGP 224
Score = 30.4 bits (67), Expect = 0.32
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 11/72 (15%)
Query: 10 PRRQRGPE---GARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG---- 62
P + +GP G++ S SP G P P +Q P G+PQ P G
Sbjct: 280 PGKPQGPPPQGGSKSRSSRSPPGKPQG---PPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 336
Query: 63 -GPAPPRLPRRP 73
GP PP P+ P
Sbjct: 337 QGPPPPGKPQGP 348
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPA 65
P G + +GP + P +G P P + P G +PQ GP
Sbjct: 40 PPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ------GPP 93
Query: 66 PPRLPRRP 73
PP P+ P
Sbjct: 94 PPGKPQGP 101
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 10 PRRQRGP---EGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESP 59
P + +GP EG +G P G+ + P Q P +GGRP P
Sbjct: 363 PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 32.7 bits (73), Expect = 0.065
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 9 GPRRQRGPEGARREG--SDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG---- 62
GP P+G +G S SPR P P +Q P G+PQ P G
Sbjct: 70 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRP 129
Query: 63 -GPAPPRLPRRP 73
GP PP P+ P
Sbjct: 130 QGPPPPGKPQGP 141
Score = 32.7 bits (73), Expect = 0.065
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 9 GPRRQRGPEGARREG--SDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG---- 62
GP P+G +G S SPR P P +Q P G+PQ P G
Sbjct: 131 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKP 190
Query: 63 -GPAPPRLPRRP 73
GP PP P+ P
Sbjct: 191 QGPPPPGKPQGP 202
Score = 32.3 bits (72), Expect = 0.084
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG--- 62
P G + P+G + S SP G P P +Q P G+PQ P G
Sbjct: 194 PPPGKPQGPPPQGDKSRSSQSPPGKPQG---PPPQGGNQPQGPPPPPGKPQGPPPQGGNK 250
Query: 63 --GPAPPRLPRRP 73
GP PP P+ P
Sbjct: 251 PQGPPPPGKPQGP 263
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 10 PRRQRGP---EGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESP 59
P + +GP EG +G P G+ + P Q P +GGRP P
Sbjct: 278 PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 330
Score = 26.2 bits (56), Expect = 6.1
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 25 DSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG-----GPAPPRLPRRP 73
+SP + P P ++ P G+PQ P G GP PP P+ P
Sbjct: 27 ESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 80
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 32.7 bits (73), Expect = 0.065
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 7 HAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWG 62
H GP GP+G + RG GE P P S+ + P G P E WG
Sbjct: 321 HIGPPGPTGPKGISGHPGEKGERGLRGE--PGPQGSAGQRGEPGPKGDPGEKSHWG 374
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 32.3 bits (72), Expect = 0.084
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPV-----EGGR-PQESPGWG 62
GP+ GP+G R + D G GE P+ + P+ EG R P+ PG
Sbjct: 453 GPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTV 512
Query: 63 GPAPP 67
GP P
Sbjct: 513 GPPGP 517
Score = 32.3 bits (72), Expect = 0.084
Identities = 23/66 (34%), Positives = 26/66 (39%)
Query: 8 AGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAPP 67
AG R GP+G R + D RG G+ Q L P Q S G GP P
Sbjct: 1115 AGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGP 1174
Query: 68 RLPRRP 73
R P P
Sbjct: 1175 RGPPGP 1180
Score = 27.3 bits (59), Expect = 2.7
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 8 AGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGR-PQESPGWGGP-- 64
AGP RGPEG + + ++ G VG P G + P SPG GP
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPVG----SPGLPGAIGTDGTPGAKGPTGSPGTSGPPG 444
Query: 65 --APPRLP 70
PP P
Sbjct: 445 SAGPPGSP 452
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 26/71 (36%)
Query: 9 GPRRQRGPEG----ARREGSDSPR--------RGSVGELAPEPNKSSQRLAHPVEGGRPQ 56
GP RGP G + +EG+ P RGSVGE PE G P
Sbjct: 1170 GPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPE--------------GPPG 1215
Query: 57 ESPGWGGPAPP 67
E G P PP
Sbjct: 1216 EPGPPGPPGPP 1226
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGR--PQESPGWGG 63
GP+ + G G++ E + G++G L P P E GR PQ +PG G
Sbjct: 309 GPKGEVGAPGSKGEAGPTGPMGAMGPLGPR--------GMPGERGRLGPQGAPGQRG 357
>gi|11386161 alpha 2 type IX collagen [Homo sapiens]
Length = 689
Score = 32.3 bits (72), Expect = 0.084
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGG 63
GPR + GP+G + D RG VG+ P+ + + P PQ PG G
Sbjct: 373 GPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKG 427
>gi|194353970 alpha-2A-adrenergic receptor [Homo sapiens]
Length = 465
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 11/68 (16%)
Query: 9 GPRRQRGPEGARREGSDSPRRGSVGELAP-----------EPNKSSQRLAHPVEGGRPQE 57
GP R GP GA E + G+ GE AP E + SS P RP+
Sbjct: 269 GPERSAGPGGAEAEPLPTQLNGAPGEPAPAGPRDTDALDLEESSSSDHAERPPGPRRPER 328
Query: 58 SPGWGGPA 65
P G A
Sbjct: 329 GPRGKGKA 336
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.0 bits (71), Expect = 0.11
Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGR-----PQESPG 60
P PR RG GARR G +VG P P + P G R P G
Sbjct: 168 PTRRPRGTRG--GARRPGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSG 225
Query: 61 WGGPAPPRLP 70
W PP P
Sbjct: 226 WTPARPPSPP 235
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.0 bits (71), Expect = 0.11
Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGR-----PQESPG 60
P PR RG GARR G +VG P P + P G R P G
Sbjct: 168 PTRRPRGTRG--GARRPGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSG 225
Query: 61 WGGPAPPRLP 70
W PP P
Sbjct: 226 WTPARPPSPP 235
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.0 bits (71), Expect = 0.11
Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGR-----PQESPG 60
P PR RG GARR G +VG P P + P G R P G
Sbjct: 168 PTRRPRGTRG--GARRPGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSG 225
Query: 61 WGGPAPPRLP 70
W PP P
Sbjct: 226 WTPARPPSPP 235
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 32.0 bits (71), Expect = 0.11
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 9 GPRRQRGPEGAR--REGSDSPRRGSVGELAPEPNKSSQRLAHPVEGGRPQESPGWGGPAP 66
GP PE + R S PR+ S E +PEP K ++ P SPG P P
Sbjct: 258 GPSPAASPESRKSARTTSPEPRKPSPSE-SPEPWKPFPAVSPEPRRPAPAVSPGSWKPGP 316
Query: 67 PRLPR 71
P PR
Sbjct: 317 PGSPR 321
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 22/84 (26%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRR----------GSVGELAPEPNKSS---------QRL 46
P +GP R P R G P+R GS + P P S+ R
Sbjct: 143 PPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRG 202
Query: 47 AHPVEGGRPQESPGWGGPAPPRLP 70
+ PV GG Q SP GP PP P
Sbjct: 203 SPPVPGGPRQPSP---GPTPPPFP 223
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 22/84 (26%)
Query: 6 PHAGPRRQRGPEGARREGSDSPRR----------GSVGELAPEPNKSS---------QRL 46
P +GP R P R G P+R GS + P P S+ R
Sbjct: 143 PPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRG 202
Query: 47 AHPVEGGRPQESPGWGGPAPPRLP 70
+ PV GG Q SP GP PP P
Sbjct: 203 SPPVPGGPRQPSP---GPTPPPFP 223
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,570,802
Number of Sequences: 37866
Number of extensions: 265042
Number of successful extensions: 2232
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 1770
Number of HSP's gapped (non-prelim): 741
length of query: 76
length of database: 18,247,518
effective HSP length: 48
effective length of query: 28
effective length of database: 16,429,950
effective search space: 460038600
effective search space used: 460038600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.