LOC642515 1201

Name: LOC642515	Sequence: fasta or formatted (288aa)		NCBI GI: 113420954
Description: PREDICTED: similar to NG5 protein		Not currently referenced in the text
Other entries for this name: alt mRNA {288aa} PREDICTED: similar to NG5 protein alt prot {93aa} PREDICTED: similar to NG5 protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.5 39 3 C cysteine 1.0 3 2 D aspartate 2.8 8 1 E glutamate 4.5 13 2 F phenylalanine 3.8 11 1 G glycine 9.0 26 3 H histidine 1.4 4 1 I isoleucine 1.7 5 1 K lysine 2.8 8 1 L leucine 9.7 28 2 M methionine 2.4 7 2 N asparagine 0.3 1 1 P proline 19.8 57 3 Q glutamine 3.1 9 1 R arginine 4.5 13 2 S serine 5.9 17 1 T threonine 3.8 11 1 V valine 6.2 18 3 W tryptophan 0.7 2 1 Y tyrosine 2.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to NG5 protein LOC642515 1.000 PREDICTED: similar to NG5 protein LOC642515 0.277 PREDICTED: similar to NG5 protein PRRT1 0.111 NG5 protein FLJ22184 0.089 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.085 PREDICTED: hypothetical protein LOC80164 NACA 0.084 nascent polypeptide-associated complex alpha subuni... CPSF6 0.080 cleavage and polyadenylation specific factor 6, 68 ... MAPK1IP1L 0.078 MAPK-interacting and spindle-stabilizing protein [Ho... SETD1B 0.073 SET domain containing 1B COL4A5 0.070 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.070 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.070 type IV collagen alpha 5 isoform 3 precursor SF3A2 0.068 splicing factor 3a, subunit 2 FLJ22184 0.068 PREDICTED: hypothetical protein FLJ22184 TAF4 0.068 TBP-associated factor 4 COL18A1 0.064 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.064 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.064 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL5A1 0.063 alpha 1 type V collagen preproprotein RAPH1 0.063 Ras association and pleckstrin homology domains 1 is... MEX3D 0.061 ring finger and KH domain containing 1 COL9A3 0.061 alpha 3 type IX collagen VPS37C 0.061 vacuolar protein sorting 37C CASKIN1 0.059 CASK interacting protein 1 COL9A1 0.057 alpha 1 type IX collagen isoform 1 precursor WIPF2 0.057 WIRE protein WIPF3 0.057 WAS/WASL interacting protein family, member 3 [Homo... COL8A1 0.056 alpha 1 type VIII collagen precursor COL8A1 0.056 alpha 1 type VIII collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.