Search of human proteins with 239749936

Search of human proteins with 239749936

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749936 PREDICTED: similar to single Ig IL-1R-related
molecule [Homo sapiens]
         (304 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749936 PREDICTED: similar to single Ig IL-1R-related molec...   626   e-180
gi|205277451 single Ig IL-1R-related molecule [Homo sapiens]          413   e-116
gi|205277449 single Ig IL-1R-related molecule [Homo sapiens]          413   e-116
gi|205277445 single Ig IL-1R-related molecule [Homo sapiens]          413   e-116
gi|239754797 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003
gi|239743415 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003
gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo...    36   0.048
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             36   0.048
gi|119220552 sidekick 1 [Homo sapiens]                                 35   0.063
gi|4504655 interleukin 18 receptor 1 precursor [Homo sapiens]          35   0.082
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ...    35   0.082
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            35   0.082
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ...    35   0.082
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            35   0.082
gi|4504661 interleukin 1 receptor accessory protein isoform 1 [H...    35   0.11 
gi|75677365 dynein heavy chain domain 3 [Homo sapiens]                 35   0.11 
gi|31324577 molecule interacting with Rab13 [Homo sapiens]             35   0.11 
gi|142976757 immediate early response 5 [Homo sapiens]                 33   0.24 
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]                       33   0.24 
gi|171543895 ataxin 2 [Homo sapiens]                                   33   0.41 
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]           32   0.70 
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]           32   0.70 
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]           32   0.70 
gi|27894378 chloride intracellular channel 6 [Homo sapiens]            32   0.70 
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]            32   0.91 
gi|209413756 synapsin III isoform IIIg [Homo sapiens]                  32   0.91 
gi|209413752 synapsin III isoform IIIa [Homo sapiens]                  32   0.91 
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa...    31   1.2  
gi|169211554 PREDICTED: hypothetical protein [Homo sapiens]            31   1.2  
gi|239755994 PREDICTED: hypothetical protein [Homo sapiens]            31   1.2  

>gi|239749936 PREDICTED: similar to single Ig IL-1R-related molecule
           [Homo sapiens]
          Length = 304

 Score =  626 bits (1614), Expect = e-180
 Identities = 304/304 (100%), Positives = 304/304 (100%)

Query: 1   MGNRPGVWNVWNQAGFLEEREEIGADAQNLEGGGRSEESPRLWGSGALRAGWAGLATGPR 60
           MGNRPGVWNVWNQAGFLEEREEIGADAQNLEGGGRSEESPRLWGSGALRAGWAGLATGPR
Sbjct: 1   MGNRPGVWNVWNQAGFLEEREEIGADAQNLEGGGRSEESPRLWGSGALRAGWAGLATGPR 60

Query: 61  PVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSGEPSADLLVNLSRCRRLIV 120
           PVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSGEPSADLLVNLSRCRRLIV
Sbjct: 61  PVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSGEPSADLLVNLSRCRRLIV 120

Query: 121 VLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLL 180
           VLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLL
Sbjct: 121 VLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLL 180

Query: 181 LWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDS 240
           LWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDS
Sbjct: 181 LWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDS 240

Query: 241 EVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVS 300
           EVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVS
Sbjct: 241 EVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVS 300

Query: 301 KDDM 304
           KDDM
Sbjct: 301 KDDM 304


>gi|205277451 single Ig IL-1R-related molecule [Homo sapiens]
          Length = 410

 Score =  413 bits (1062), Expect = e-116
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 103 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 162
           EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP
Sbjct: 209 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 268

Query: 163 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 222
           AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK
Sbjct: 269 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 328

Query: 223 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 282
           DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS
Sbjct: 329 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 388

Query: 283 DLGSRNYSARTDFYCLVSKDDM 304
           DLGSRNYSARTDFYCLVSKDDM
Sbjct: 389 DLGSRNYSARTDFYCLVSKDDM 410


>gi|205277449 single Ig IL-1R-related molecule [Homo sapiens]
          Length = 410

 Score =  413 bits (1062), Expect = e-116
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 103 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 162
           EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP
Sbjct: 209 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 268

Query: 163 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 222
           AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK
Sbjct: 269 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 328

Query: 223 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 282
           DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS
Sbjct: 329 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 388

Query: 283 DLGSRNYSARTDFYCLVSKDDM 304
           DLGSRNYSARTDFYCLVSKDDM
Sbjct: 389 DLGSRNYSARTDFYCLVSKDDM 410


>gi|205277445 single Ig IL-1R-related molecule [Homo sapiens]
          Length = 410

 Score =  413 bits (1062), Expect = e-116
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 103 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 162
           EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP
Sbjct: 209 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 268

Query: 163 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 222
           AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK
Sbjct: 269 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 328

Query: 223 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 282
           DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS
Sbjct: 329 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 388

Query: 283 DLGSRNYSARTDFYCLVSKDDM 304
           DLGSRNYSARTDFYCLVSKDDM
Sbjct: 389 DLGSRNYSARTDFYCLVSKDDM 410


>gi|239754797 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/88 (40%), Positives = 41/88 (46%), Gaps = 17/88 (19%)

Query: 16  FLEEREEIGADAQNLE----GGGRSEESPRLWGSGALRAGWAGLATGPR-PVRQRLPGSS 70
           FLEE E   A A+ L     GGG+ E  P   G+ A   G AGL  GPR P    LPG  
Sbjct: 91  FLEEGE---APARRLSERRRGGGKEESRP---GTAAAPGGRAGLYGGPRGPHHVSLPGLP 144

Query: 71  AASSASLGRRAGRW--AAPPPPGASPRS 96
            A +     R G W   APP P A P +
Sbjct: 145 TARA----HRPGAWPELAPPRPRARPHA 168


>gi|239743415 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/88 (40%), Positives = 41/88 (46%), Gaps = 17/88 (19%)

Query: 16  FLEEREEIGADAQNLE----GGGRSEESPRLWGSGALRAGWAGLATGPR-PVRQRLPGSS 70
           FLEE E   A A+ L     GGG+ E  P   G+ A   G AGL  GPR P    LPG  
Sbjct: 91  FLEEGE---APARRLSERRRGGGKEESRP---GTAAAPGGRAGLYGGPRGPHHVSLPGLP 144

Query: 71  AASSASLGRRAGRW--AAPPPPGASPRS 96
            A +     R G W   APP P A P +
Sbjct: 145 TARA----HRPGAWPELAPPRPRARPHA 168


>gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo
           sapiens]
          Length = 738

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 42  LW--GSGALRAGWAGLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQ 99
           LW  G G+ R G       PR  R R PG  AA +A  G  A R     PPG   R    
Sbjct: 92  LWARGPGSCRCGAFAGPGAPRLPRARFPGGPAA-AAWAGDEAWRRGPAAPPGDKGRLRPA 150

Query: 100 VSGEPSADLLVNLSRCRRLIVVLSDAFLS 128
            +G P A  L+ L+   R  +  +  FL+
Sbjct: 151 AAGLPEARKLLGLAYPERRRLAAAVGFLT 179


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 26/77 (33%), Positives = 34/77 (44%)

Query: 20  REEIGADAQNLEGGGRSEESPRLWGSGALRAGWAGLATGPRPVRQRLPGSSAASSASLGR 79
           R++  A A      G+   SPR   S   R G A    G R  R+R    S +S+++  R
Sbjct: 346 RDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRR 405

Query: 80  RAGRWAAPPPPGASPRS 96
           R  R   P PP  S RS
Sbjct: 406 RGRRRPRPAPPRGSSRS 422


>gi|119220552 sidekick 1 [Homo sapiens]
          Length = 2213

 Score = 35.4 bits (80), Expect = 0.063
 Identities = 30/82 (36%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 24 GADAQNLEGGGRSEESPRLWGSGALRAGWAGLAT-------GPRPVRQRL-PGSSAASSA 75
          GA      GGG   E P   G G  R    G A        GP P R R  P +S   +A
Sbjct: 4  GARPSAAGGGGGGAEPPERAGPGRPRGSPPGRARPSLAPRPGPEPSRPRAAPETSGGDTA 63

Query: 76 SLGRRAGRWAAPPPPGASPRSW 97
            GR  GR AA   PG   R W
Sbjct: 64 GAGRCGGRRAAKLGPGR--RGW 83


>gi|4504655 interleukin 18 receptor 1 precursor [Homo sapiens]
          Length = 541

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 112 LSRCRRLIVVLSDAFLSRAWCSHSFREGLCR-LLELTRRPIFITFEGQRRDPAHP-ALRL 169
           + + RRLI+VLS +++S     +    GL   L+E   + I I F         P +L+L
Sbjct: 433 IEKSRRLIIVLSKSYMSNE-VRYELESGLHEALVERKIKIILIEFTPVTDFTFLPQSLKL 491

Query: 170 LRQHRHLVTLLLWRPG-SVTPSSDFWKEVQLALPRKVQYRPVEGDPQ 215
           L+ HR    +L W+   S++ +S FWK +   +P K   +P   +P+
Sbjct: 492 LKSHR----VLKWKADKSLSYNSRFWKNLLYLMPAKT-VKPGRDEPE 533


>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
           sapiens]
          Length = 594

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 30/93 (32%), Positives = 32/93 (34%), Gaps = 29/93 (31%)

Query: 41  RLWGSGALRAG------------WAGLATGPRPVRQRLP--------------GSSAASS 74
           R WG GA R              W G A  PRP R  LP                +AA  
Sbjct: 459 RGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQR 518

Query: 75  ASLGRRAGRWAAPPP---PGASPRSWQQVSGEP 104
             LG R G+    PP   PG  PR      GEP
Sbjct: 519 TELGGRVGKGPGAPPSALPGPRPRPDSLSPGEP 551


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 34  GRSEESPRLWGSGALRAG-WA-GLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPG 91
           GRS+ SP + G+   + G W  G  + P P  QRL       S       GR +APP  G
Sbjct: 108 GRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHG 167

Query: 92  ASPRSWQQVSGEP 104
             P+S+++ S  P
Sbjct: 168 PHPQSFRRPSAHP 180


>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
           sapiens]
          Length = 594

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 30/93 (32%), Positives = 32/93 (34%), Gaps = 29/93 (31%)

Query: 41  RLWGSGALRAG------------WAGLATGPRPVRQRLP--------------GSSAASS 74
           R WG GA R              W G A  PRP R  LP                +AA  
Sbjct: 459 RGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQR 518

Query: 75  ASLGRRAGRWAAPPP---PGASPRSWQQVSGEP 104
             LG R G+    PP   PG  PR      GEP
Sbjct: 519 TELGGRVGKGPGAPPSALPGPRPRPDSLSPGEP 551


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 34  GRSEESPRLWGSGALRAG-WA-GLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPG 91
           GRS+ SP + G+   + G W  G  + P P  QRL       S       GR +APP  G
Sbjct: 108 GRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHG 167

Query: 92  ASPRSWQQVSGEP 104
             P+S+++ S  P
Sbjct: 168 PHPQSFRRPSAHP 180


>gi|4504661 interleukin 1 receptor accessory protein isoform 1 [Homo
           sapiens]
          Length = 570

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 112 LSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLR 171
           + + RRL+VVLS  ++ +   + +  E    L  +  R        Q +      ++ L+
Sbjct: 458 IQKSRRLLVVLSPNYVLQG--TQALLELKAGLENMASRGNINVILVQYKAVKETKVKELK 515

Query: 172 QHRHLVTLLLWR-PGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQ 215
           + + ++T++ W+   S  P   FWK++Q+A+P K   R    D Q
Sbjct: 516 RAKTVLTVIKWKGEKSKYPQGRFWKQLQVAMPVKKSPRRSSSDEQ 560


>gi|75677365 dynein heavy chain domain 3 [Homo sapiens]
          Length = 4427

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 35  RSEESPRLWGSGALRAGWAGLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPGASP 94
           ++E+  RL G G+ +A W+G AT      Q    + A S   L     +   P P    P
Sbjct: 4   KAEKKQRLSGRGSSQASWSGRATRAAVATQEQGNAPAVSEPELQAELPK-EEPEPRLEGP 62

Query: 95  RSWQQVSGEPSADL 108
           ++  + S EP AD+
Sbjct: 63  QAQSEESVEPEADV 76


>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
          Length = 863

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 2   GNRPGVWNVWNQAGFLEEREEIGADAQNLEGGGRSEESPRLWGSGALRAGWAGLATGPRP 61
           G RPG ++   Q    + ++++  DA+++ GGG S  +P   G+ A     +  A    P
Sbjct: 228 GTRPGPFSQPKQ----QHQQQLAEDAKDVPGGGPSSSAPA--GAEADGPKASPEARPQIP 281

Query: 62  VRQRLPGS-------SAASSASLGRRAGRWAAPPPPGASPRS 96
            + R+PG         A       R+A     P PP   PRS
Sbjct: 282 TKPRVPGKLQELASPPAGRPTPAPRKASESTTPAPPTPRPRS 323



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 52  WAGLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPGASP 94
           W G+     P  ++ P   A S++ L   A R +   PP A+P
Sbjct: 463 WYGITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPPSATP 505


>gi|142976757 immediate early response 5 [Homo sapiens]
          Length = 327

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 7/52 (13%)

Query: 53  AGLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSGEP 104
           AG A  P P  Q+ PG  AA     G  AG W  PPPP A+  SW +   +P
Sbjct: 58  AGPAGTPAPPPQQQPGEPAA-----GPPAG-WGEPPPP-AARASWPETEPQP 102


>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
          Length = 1049

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 47  ALRAGWAGLATGPRPVRQRLPG------SSAASSASLGRRAGRWA-APPPPGASPRSWQQ 99
           ++R G++ +A G  P      G      + A  S  + R    W+  PPPPG  P +W+Q
Sbjct: 910 SMRLGFSSMALGGIPAEAAAQGYPAPPPAPAWPSRPVPRSGAHWSHGPPPPGMPPPAWRQ 969

Query: 100 VS 101
            S
Sbjct: 970 PS 971


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 33/101 (32%), Positives = 38/101 (37%), Gaps = 22/101 (21%)

Query: 50  AGWAGLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSGEPSADLL 109
           A W G  +  RP R+   G   A+           AAPPPPG  P   +Q S  PSA   
Sbjct: 23  ARWPGWRSLQRPARRSGRGGGGAAPGPYPS-----AAPPPPGPGPPPSRQ-SSPPSA--- 73

Query: 110 VNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRP 150
                        SD F S      +FR G  RLL L   P
Sbjct: 74  -------------SDCFGSNGNGGGAFRPGSRRLLGLGGPP 101


>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 74  SASLGRRAGRWAAPPPPGASPRSWQQVSGE 103
           +ASL RR  R+ A  PPGASPR WQ   G+
Sbjct: 44  AASLTRRPVRFCARLPPGASPR-WQLCGGD 72


>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 74  SASLGRRAGRWAAPPPPGASPRSWQQVSGE 103
           +ASL RR  R+ A  PPGASPR WQ   G+
Sbjct: 44  AASLTRRPVRFCARLPPGASPR-WQLCGGD 72


>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 74  SASLGRRAGRWAAPPPPGASPRSWQQVSGE 103
           +ASL RR  R+ A  PPGASPR WQ   G+
Sbjct: 44  AASLTRRPVRFCARLPPGASPR-WQLCGGD 72


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 24  GADAQNLEGGGRSEESPRLWGSGALR-AGWAGLATGPRPVRQRLPGSSAASSASLGRRAG 82
           G +A+  EG   +EE+PR  G+ A++ AG  G   GP    +   G+   + A  G   G
Sbjct: 35  GGEAEGPEGSEGAEEAPR--GAAAVKEAGGGGPDRGPEAEARGTRGAHGETEAEEGAPEG 92

Query: 83  RWAAPPPPGASPRSWQQVSG 102
             A  P  G      QQV G
Sbjct: 93  --AEVPQGGEETSGAQQVEG 110


>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 16/60 (26%)

Query: 45  SGALRAGWAGL---------ATGPRPVRQR-----LPGSSAASSASLGRRAGRWAAPPPP 90
           +G LR  W            A   RP RQR     LPGS+AA +   GR A R   PPPP
Sbjct: 78  AGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPAP--GRDALRLPPPPPP 135


>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
          Length = 579

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 57  TGPRPVRQRLPGSSAASS---ASLGRRAGRWAAPPPPGASPRSWQ----QVSGEPSADLL 109
           T P P+R   P   +A S   A LG + G+    PPP   PR  Q    Q SG PS   L
Sbjct: 401 TAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRL 460


>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
          Length = 580

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 57  TGPRPVRQRLPGSSAASS---ASLGRRAGRWAAPPPPGASPRSWQ----QVSGEPSADLL 109
           T P P+R   P   +A S   A LG + G+    PPP   PR  Q    Q SG PS   L
Sbjct: 402 TAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRL 461


>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
           sapiens]
          Length = 756

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 33  GGRSEESPRLW--GSGALRAGWAGLATGPRPVRQ---RLPGSSAASSASLGRRAGRWAAP 87
           GG   +SP L     GA   G A  + GP P  +   R PG SA    S  R  G+ A+P
Sbjct: 46  GGPDPQSPGLDEPAPGAAADGGARWSAGPAPGLEGGPRDPGPSAPPPRSGPR--GQLASP 103

Query: 88  PPPGASPRS 96
             PG  PRS
Sbjct: 104 DAPGPGPRS 112


>gi|169211554 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 115

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 54  GLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSGEPSADLLVNLS 113
           G A  P P R+ LP  SAA+  +  R A     P  PGA+ R+  +   EP   LL +L+
Sbjct: 46  GAACSPDPFRKELPPLSAATDTAPSRAA---PCPSTPGAAGRANNK---EPPLPLLADLT 99


>gi|239755994 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 238

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 32  GGGRSE--ESPRLWGSGALRAGWAGLATGPRPVRQRL----PGSSAASSASLGRRAGRWA 85
           GGGR    E PR W +   R    G A G +  R+ L       S   SAS   R  R  
Sbjct: 46  GGGRGVVWEGPRPWEARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQG 105

Query: 86  APPPPGASPR 95
           A PP    PR
Sbjct: 106 ALPPTKTCPR 115


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.136    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,745,322
Number of Sequences: 37866
Number of extensions: 818272
Number of successful extensions: 4117
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 4020
Number of HSP's gapped (non-prelim): 211
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.