Guide to the Human Genome
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Name: LOC729806 Sequence: fasta or formatted (583aa) NCBI GI: 239747658
Description:

PREDICTED: similar to hCG1725380

Not currently referenced in the text

Other entries for this name:
alt mRNA {583aa} PREDICTED: similar to hCG1725380
alt prot {583aa} PREDICTED: similar to hCG1725380
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         24           2
 C cysteine            5.8         34           2
 D aspartate           2.6         15           1
 E glutamate           7.5         44           2
 F phenylalanine       3.6         21           1
 G glycine             5.8         34           2
 H histidine           5.7         33           1
 I isoleucine          4.5         26           3
 K lysine              9.3         54           2
 L leucine             6.9         40           2
 M methionine          0.7          4           1
 N asparagine          4.3         25           1
 P proline             6.3         37           2
 Q glutamine           4.1         24           2
 R arginine            5.5         32           2
 S serine              9.1         53           4
 T threonine           5.1         30           2
 V valine              3.9         23           1
 W tryptophan          2.6         15           1
 Y tyrosine            2.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1725380 
LOC729806             1.000   PREDICTED: similar to hCG1725380 
LOC729806             0.998   PREDICTED: similar to hCG1725380 
ZNF98                 0.434   zinc finger protein 98 
ZNF682                0.430   zinc finger protein 682 isoform 1 
LOC646864             0.430   PREDICTED: similar to hCG36734 
LOC646864             0.430   PREDICTED: similar to hCG36734 
LOC646864             0.430   PREDICTED: similar to hCG36734 
ZNF92                 0.428   zinc finger protein 92 isoform 2 
ZNF680                0.426   zinc finger protein 680 isoform 1 
ZNF430                0.421   zinc finger protein 430 
LOC730110             0.419   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.419   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.419   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF695                0.415   zinc finger protein SBZF3 
ZNF737                0.415   zinc finger protein 737 
ZNF737                0.415   PREDICTED: zinc finger protein 737 
ZNF737                0.415   PREDICTED: zinc finger protein 737 
ZNF737                0.415   PREDICTED: zinc finger protein 737 
ZNF100                0.413   zinc finger protein 100 
ZNF431                0.411   zinc finger protein 431 
ZNF595                0.410   zinc finger protein 595 
ZNF273                0.410   zinc finger protein 273 
ZNF708                0.410   zinc finger protein 708 
ZNF254                0.407   zinc finger protein 254 
ZNF85                 0.406   zinc finger protein 85 
ZNF726                0.406   PREDICTED: zinc finger protein 726 
ZNF726                0.406   PREDICTED: zinc finger protein 726 
ZNF726                0.406   PREDICTED: zinc finger protein 726 
ZNF679                0.405   zinc finger protein 679 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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