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Search of human proteins with 117938318
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117938318 vacuolar protein sorting 37D [Homo sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117938318 vacuolar protein sorting 37D [Homo sapiens] 503 e-143
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 131 5e-31
gi|13375926 vacuolar protein sorting 37B [Homo sapiens] 127 9e-30
gi|223555921 hepatocellular carcinoma related protein 1 isoform ... 74 1e-13
gi|223555919 hepatocellular carcinoma related protein 1 isoform ... 74 1e-13
gi|47132519 Ras association and pleckstrin homology domains 1 is... 46 4e-05
gi|33356148 formin-like 1 [Homo sapiens] 46 4e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 1e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 1e-04
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 44 1e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 44 1e-04
gi|8922157 proline rich 13 isoform 1 [Homo sapiens] 44 1e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 44 2e-04
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 44 2e-04
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 43 3e-04
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 43 3e-04
gi|41281612 zinc finger protein 828 [Homo sapiens] 43 3e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 4e-04
gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ... 42 5e-04
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ... 42 5e-04
gi|9945318 MAX binding protein [Homo sapiens] 42 5e-04
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 42 5e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 42 7e-04
gi|157168329 formin 1 [Homo sapiens] 41 9e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 41 9e-04
gi|40353727 synaptopodin isoform A [Homo sapiens] 41 9e-04
gi|34577114 cytomatrix protein p110 [Homo sapiens] 41 9e-04
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... 41 9e-04
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 41 9e-04
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 41 9e-04
>gi|117938318 vacuolar protein sorting 37D [Homo sapiens]
Length = 251
Score = 503 bits (1296), Expect = e-143
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MYRARAARAGPEPGSPGRFGILSTGQLRDLLQDEPKLDRIVRLSRKFQGLQLEREACLAS 60
MYRARAARAGPEPGSPGRFGILSTGQLRDLLQDEPKLDRIVRLSRKFQGLQLEREACLAS
Sbjct: 1 MYRARAARAGPEPGSPGRFGILSTGQLRDLLQDEPKLDRIVRLSRKFQGLQLEREACLAS 60
Query: 61 NYALAKENLALRPRLEMGRAALAIKYQELREVAENCADKLQRLEESMHRWSPHCALGWLQ 120
NYALAKENLALRPRLEMGRAALAIKYQELREVAENCADKLQRLEESMHRWSPHCALGWLQ
Sbjct: 61 NYALAKENLALRPRLEMGRAALAIKYQELREVAENCADKLQRLEESMHRWSPHCALGWLQ 120
Query: 121 AELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQ 180
AELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQ
Sbjct: 121 AELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQ 180
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS
Sbjct: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
Query: 241 PRPSQPEPPHR 251
PRPSQPEPPHR
Sbjct: 241 PRPSQPEPPHR 251
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 131 bits (330), Expect = 5e-31
Identities = 88/229 (38%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 26 QLRDLLQDEPKLDRIVRLSRKFQGLQLEREACLASNYALAKENLALRPRLEMGRAALAIK 85
+L +L D +D++ S + Q LQLERE LA+N +LA+ NL + LE+ R+ L+ +
Sbjct: 11 ELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPLEISRSNLSDR 70
Query: 86 YQELREVAENCADKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQMEQLLLGEQSLE 145
YQELR++ E C ++ +LE+ P L LQ E + E+E+E E+ L GE LE
Sbjct: 71 YQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEVPLE 130
Query: 146 AFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAAR 205
FL F R L+HLRR + EKLQE++R+ S + A A PP+ P +P G
Sbjct: 131 TFLENFSSMRMLSHLRRVRVEKLQEVVRKPRASQELA--GDAPPPRPPPPVRPVPQGT-- 186
Query: 206 GPPAV-PRSLPPLDSRPVP-PLKGSPGCPLGPA------PLLSPRPSQP 246
PP V + PPL P P P SP P+GP P P SQP
Sbjct: 187 -PPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQP 234
Score = 33.5 bits (75), Expect = 0.18
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 181 PAPTSAADPPK--------SFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGS-PGC 231
PAP P ++PAA + P GAA + RS+PP P P+ S PG
Sbjct: 225 PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGY 284
Query: 232 PLGPAPLLSPRPSQPEP 248
PL SP Q P
Sbjct: 285 PLRGGRAPSPGYPQQSP 301
Score = 31.2 bits (69), Expect = 0.89
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 189 PPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS-PRPSQPE 247
P +P + P + P + LP +P P + P P GPAP P P P
Sbjct: 292 PSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPA 351
Query: 248 PP 249
P
Sbjct: 352 WP 353
Score = 29.3 bits (64), Expect = 3.4
Identities = 24/80 (30%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 176 ERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRS-LPPLDSRPV----PPLKGSPG 230
+RS P P P + L G A P +S P +P P L PG
Sbjct: 263 QRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPG 322
Query: 231 CPLGPAPLLSPRPSQPEPPH 250
P PL P P P PP+
Sbjct: 323 QPQPSVPLQPPYPPGPAPPY 342
>gi|13375926 vacuolar protein sorting 37B [Homo sapiens]
Length = 285
Score = 127 bits (319), Expect = 9e-30
Identities = 84/214 (39%), Positives = 119/214 (55%), Gaps = 6/214 (2%)
Query: 14 GSPGRFGILSTGQLRDLLQDEPKLDRIVRLSRKFQGLQLEREACLASNYALAKENLALRP 73
GS RF LS QL +LL+DE +L +V+ + Q +QL +E LASN +LA+ NL +P
Sbjct: 5 GSEARFAGLSLVQLNELLEDEGQLTEMVQKMEETQNVQLNKEMTLASNRSLAEGNLLYQP 64
Query: 74 RLEMGRAALAIKYQELREVAENCADKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQ 133
+L+ +A L KYQEL+ + E K +L+ S L LQAE + E++ E
Sbjct: 65 QLDTLKARLTQKYQELQVLFEAYQIKKTKLDRQSSSASLETLLALLQAEGAKIEEDTENM 124
Query: 134 MEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQP-APTSAADPPKS 192
E+ L GE L++F+ +Q R LAH+RR + EKLQE++ + +R Q AP P +
Sbjct: 125 AEKFLDGELPLDSFIDVYQSKRKLAHMRRVKIEKLQEMVLKGQRLPQALAPLPPRLPELA 184
Query: 193 FPAAAVLPTGAARGPPAV-PRSLPPLDSRPVPPL 225
A P A GPPAV PR +PP P PP+
Sbjct: 185 PTAPLPYPAPEASGPPAVAPRRIPP----PPPPV 214
>gi|223555921 hepatocellular carcinoma related protein 1 isoform 2
[Homo sapiens]
Length = 372
Score = 73.9 bits (180), Expect = 1e-13
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 22 LSTGQLRDLL-QDEPKLDRIVRLSRKFQGLQLEREACLASNYALAKENLALRPRLEMGRA 80
LS QL D+ Q+E L++ + L + Q + +++ + S LA++NL L P LE R
Sbjct: 212 LSVSQLTDMNEQEEVLLEQFLTLPQLKQ-IITDKDDLVKSIEELARKNLLLEPSLEAKRQ 270
Query: 81 ALAIKYQELREVAENCADKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQM----EQ 136
+ KY+ L ++ K+QR H S C+ LQA L+ A EAEE+ E
Sbjct: 271 TVLDKYELLTQMKSTFEKKMQR----QHELSESCSASALQARLKVAAHEAEEESDNIAED 326
Query: 137 LLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQP 181
L G+ ++ FL +F R + H RR + EKLQ+ + + P
Sbjct: 327 FLEGKMEIDDFLSSFMEKRTICHCRRAKEEKLQQAIAMHSQFHAP 371
>gi|223555919 hepatocellular carcinoma related protein 1 isoform 1
[Homo sapiens]
Length = 397
Score = 73.9 bits (180), Expect = 1e-13
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 22 LSTGQLRDLL-QDEPKLDRIVRLSRKFQGLQLEREACLASNYALAKENLALRPRLEMGRA 80
LS QL D+ Q+E L++ + L + Q + +++ + S LA++NL L P LE R
Sbjct: 237 LSVSQLTDMNEQEEVLLEQFLTLPQLKQ-IITDKDDLVKSIEELARKNLLLEPSLEAKRQ 295
Query: 81 ALAIKYQELREVAENCADKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQM----EQ 136
+ KY+ L ++ K+QR H S C+ LQA L+ A EAEE+ E
Sbjct: 296 TVLDKYELLTQMKSTFEKKMQR----QHELSESCSASALQARLKVAAHEAEEESDNIAED 351
Query: 137 LLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQP 181
L G+ ++ FL +F R + H RR + EKLQ+ + + P
Sbjct: 352 FLEGKMEIDDFLSSFMEKRTICHCRRAKEEKLQQAIAMHSQFHAP 396
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 45.8 bits (107), Expect = 4e-05
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 181 PAPTSAADPPKSFPAAAVL---PTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAP 237
P P A PP++ P V PT P V ++ PP + PVPP K P P P
Sbjct: 766 PPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIP 825
Query: 238 LLSPRPSQPEPP 249
P P P PP
Sbjct: 826 PSPPTPPVPVPP 837
Score = 35.8 bits (81), Expect = 0.036
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 177 RSAQPAPTSAADPPK---SFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPL 233
++A P PT P K +FPA+ + P+ P P +LP S P P PL
Sbjct: 800 QAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKP----PPSPL 855
Query: 234 GPAP-----LLSPRPSQPEPP 249
P P + S P P PP
Sbjct: 856 SPVPSVVKQIASQFPPPPTPP 876
Score = 30.8 bits (68), Expect = 1.2
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 12/91 (13%)
Query: 147 FLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARG 206
F A++RG L + + E + P ++ PP S V P A++
Sbjct: 577 FSEAWKRGTQLEESSKARMESMNR------------PYTSLVPPLSPQPKIVTPYTASQP 624
Query: 207 PPAVPRSLPPLDSRPVPPLKGSPGCPLGPAP 237
P +P PP P PP P P AP
Sbjct: 625 SPPLPPPPPPPPPPPPPPPPPPPPLPSQSAP 655
Score = 30.4 bits (67), Expect = 1.5
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 181 PAPTSAADPPK---SFPAAA----VLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPL 233
PAP PPK + PA V P PP +PP +P P P P
Sbjct: 770 PAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPP 829
Query: 234 GPAPLLSPRPSQPE 247
P P+ P P+ P+
Sbjct: 830 TP-PVPVPPPTLPK 842
Score = 30.0 bits (66), Expect = 2.0
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 180 QPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSR-----PVPPLKGSPGCPLG 234
+P P + A P+S PA P P PP P PP P P
Sbjct: 884 KPVPANVA--PQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPP 941
Query: 235 PAPLLSPRPSQPEPP 249
P P SP P + P
Sbjct: 942 PPPTASPTPDKSGSP 956
Score = 29.6 bits (65), Expect = 2.6
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 14/75 (18%)
Query: 183 PTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLK---------GSPGCPL 233
P PP P +A+ A P++P+ S P PPLK +P P
Sbjct: 710 PPPPPPPPPPTPGSAMAQLKPAPCAPSLPQF-----SAPPPPLKIHQVQHITQVAPPTPP 764
Query: 234 GPAPLLSPRPSQPEP 248
P P+ +P P Q P
Sbjct: 765 PPPPIPAPLPPQAPP 779
Score = 28.9 bits (63), Expect = 4.4
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 214 LPPLDSRP---VPPLKGSPGCPLGPAPLLSPRPSQPEPP 249
+PPL +P P P PL P P P P P PP
Sbjct: 606 VPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPP 644
Score = 28.9 bits (63), Expect = 4.4
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 194 PAAAVLPTGAARGPPAVPRS--LPPLDSRPVPPLKGSPGCPLGPAPLLS--PRPSQPEPP 249
P V+ + + + VP + +PP P PP GS L PAP P+ S P PP
Sbjct: 687 PTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPP 746
Score = 28.9 bits (63), Expect = 4.4
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P+P PP+S + V P PA P PP S P P GSPG S
Sbjct: 912 PSPDFPPPPPES---SLVFPPPPPSPVPAPPPPPPPTAS-PTPDKSGSPGKKTSKTS--S 965
Query: 241 PRPSQPEP 248
P +P P
Sbjct: 966 PGGKKPPP 973
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 45.8 bits (107), Expect = 4e-05
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAP 237
+A+PAP +A PP P LP+ PP+ P PPL P PP P PL P
Sbjct: 533 AAEPAPGAAPPPPPPLPG---LPS-PQEAPPSAPPQAPPLPGSPEPP----PAPPL-PGD 583
Query: 238 LLSPRPSQPEPP 249
L P P P PP
Sbjct: 584 LPPPPPPPPPPP 595
Score = 39.3 bits (90), Expect = 0.003
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAV-----PRSLPPLDSRPVPPLKGSPGCPLGP 235
P + + P PAA P A PP + P+ PP PPL GSP P P
Sbjct: 519 PGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAP 578
Query: 236 APLLSPRPSQPEPP 249
PL P P PP
Sbjct: 579 -PLPGDLPPPPPPP 591
Score = 35.8 bits (81), Expect = 0.036
Identities = 42/166 (25%), Positives = 52/166 (31%), Gaps = 36/166 (21%)
Query: 119 LQAELEEAEQEA----EEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAE-------- 166
L L +AE E+ E +QL + LE F A+ RR
Sbjct: 411 LTERLRDAENESMAKIAELEKQLSQARKELETLRERFSESTAMGASRRPPEPEKAPPAAP 470
Query: 167 --------KLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLD 218
K++EL + P A + P A P+G P VP P D
Sbjct: 471 TRPSALELKVEELEEKGLIRILRGPGDAVSI-EILPVAVATPSGGDAPTPGVPTGSPSPD 529
Query: 219 SRPV------------PPLKGSPG---CPLGPAPLLSPRPSQPEPP 249
P PPL G P P P P P PEPP
Sbjct: 530 LAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPP 575
Score = 30.8 bits (68), Expect = 1.2
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 179 AQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPL-GPAP 237
A P P S +PP + P LP PP P PP PVPP P P GP
Sbjct: 565 APPLPGSP-EPPPAPPLPGDLP------PPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPD 617
Query: 238 LLSPRPSQPEP 248
L R S+ P
Sbjct: 618 ALGRRDSELGP 628
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.9 bits (102), Expect = 1e-04
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSL--PPLDSRPVPPLK------GSP 229
++ P SA PP++ P A P A+ PP P +L PPL + P PP SP
Sbjct: 487 ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSP 546
Query: 230 GCPLGPAPLLSPRPSQP 246
L +PL +P P P
Sbjct: 547 SASLPMSPLATPPPQAP 563
Score = 38.5 bits (88), Expect = 0.006
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAAR-----GPPAVPRSLPPLDSRP---VPPLKGSP 229
S Q P+ A PP + PT A PP P + PP + P +PPL+ P
Sbjct: 350 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 409
Query: 230 GCPLGP--APLLSPRPSQP 246
P P +PL +P P P
Sbjct: 410 SPPASPPLSPLATPSPQAP 428
Score = 37.7 bits (86), Expect = 0.010
Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 179 AQPAPTSAADPPKSFPAAAVLPTGAARGPPA-VPRSLP--PLDSRPVPPLKGSP--GCPL 233
A P A PP++ PA A P A PPA P P P S P+ PL P P+
Sbjct: 506 AAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPV 565
Query: 234 GPAPLLSPRPSQPEPP 249
APLL PS P P
Sbjct: 566 LAAPLLQVPPSPPASP 581
Score = 36.6 bits (83), Expect = 0.021
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 189 PPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP---VPPLKGSPGCPLGP--APLLSPRP 243
PP S P A P PP P + PP + P PPL+ P P P +P +P P
Sbjct: 442 PPPSPPVQA--PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 499
Query: 244 SQPEP 248
P P
Sbjct: 500 QAPPP 504
Score = 36.2 bits (82), Expect = 0.028
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 179 AQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPL 238
A P + +A PP P + P + PP+ P S PP+ PP + P PL PL
Sbjct: 456 ASPPVSPSATPPSQAPPSLAAPP--LQVPPSPPAS-PPMSPSATPPPQAPP--PLAAPPL 510
Query: 239 LSPRPSQPEPP 249
+P PP
Sbjct: 511 QLAKPPPQAPP 521
Score = 33.9 bits (76), Expect = 0.14
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 171 LLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPG 230
L R RS + T + P +S P+A P A P+ L L V P +
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAA 293
Query: 231 CPLGP---APLLSPRPS 244
LGP +PL +P PS
Sbjct: 294 PALGPLSSSPLATPSPS 310
Score = 33.1 bits (74), Expect = 0.24
Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P A PP++ PA A+ P A PPA P L PL + P P + L AP S
Sbjct: 385 PLSPLATPPPQAPPALALPPLQAPPSPPASP-PLSPL-ATPSPQAPNALAVHLLQAP-FS 441
Query: 241 PRPSQP 246
P PS P
Sbjct: 442 PPPSPP 447
Score = 33.1 bits (74), Expect = 0.24
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P A PP++ P VL + PP+ P S P L + PP G GP L+
Sbjct: 551 PMSPLATPPPQAPP---VLAAPLLQVPPSPPAS-PTLQAPRRPPTPGPDTSVSGPRLTLA 606
Query: 241 PRPSQPEPPHR 251
P P PP R
Sbjct: 607 LAPGPPPPPSR 617
Score = 30.4 bits (67), Expect = 1.5
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P +AA PP AA P +RGP PPL +G+PG PL P
Sbjct: 649 PEGGAAASPPPDAELAACHPAAWSRGP------APPL------AFRGAPGAPLPWPPATG 696
Query: 241 P 241
P
Sbjct: 697 P 697
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.9 bits (102), Expect = 1e-04
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSL--PPLDSRPVPPLK------GSP 229
++ P SA PP++ P A P A+ PP P +L PPL + P PP SP
Sbjct: 448 ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSP 507
Query: 230 GCPLGPAPLLSPRPSQP 246
L +PL +P P P
Sbjct: 508 SASLPMSPLATPPPQAP 524
Score = 38.5 bits (88), Expect = 0.006
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAAR-----GPPAVPRSLPPLDSRP---VPPLKGSP 229
S Q P+ A PP + PT A PP P + PP + P +PPL+ P
Sbjct: 311 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 370
Query: 230 GCPLGP--APLLSPRPSQP 246
P P +PL +P P P
Sbjct: 371 SPPASPPLSPLATPSPQAP 389
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 171 LLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPG 230
L R RS + T + P +S P+A P A P+ L L V P +
Sbjct: 225 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAA 284
Query: 231 CPLGP---APLLSPRPSQPEPP 249
LGP +PL +P PS P P
Sbjct: 285 PALGPLSSSPLATPSPSAPPSP 306
Score = 37.7 bits (86), Expect = 0.010
Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 179 AQPAPTSAADPPKSFPAAAVLPTGAARGPPA-VPRSLP--PLDSRPVPPLKGSP--GCPL 233
A P A PP++ PA A P A PPA P P P S P+ PL P P+
Sbjct: 467 AAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPV 526
Query: 234 GPAPLLSPRPSQPEPP 249
APLL PS P P
Sbjct: 527 LAAPLLQVPPSPPASP 542
Score = 36.6 bits (83), Expect = 0.021
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 189 PPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP---VPPLKGSPGCPLGP--APLLSPRP 243
PP S P A P PP P + PP + P PPL+ P P P +P +P P
Sbjct: 403 PPPSPPVQA--PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 460
Query: 244 SQPEP 248
P P
Sbjct: 461 QAPPP 465
Score = 36.2 bits (82), Expect = 0.028
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 179 AQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPL 238
A P + +A PP P + P + PP+ P S PP+ PP + P PL PL
Sbjct: 417 ASPPVSPSATPPSQAPPSLAAPP--LQVPPSPPAS-PPMSPSATPPPQAPP--PLAAPPL 471
Query: 239 LSPRPSQPEPP 249
+P PP
Sbjct: 472 QLAKPPPQAPP 482
Score = 33.1 bits (74), Expect = 0.24
Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P A PP++ PA A+ P A PPA P L PL + P P + L AP S
Sbjct: 346 PLSPLATPPPQAPPALALPPLQAPPSPPASP-PLSPL-ATPSPQAPNALAVHLLQAP-FS 402
Query: 241 PRPSQP 246
P PS P
Sbjct: 403 PPPSPP 408
Score = 33.1 bits (74), Expect = 0.24
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P A PP++ P VL + PP+ P S P L + PP G GP L+
Sbjct: 512 PMSPLATPPPQAPP---VLAAPLLQVPPSPPAS-PTLQAPRRPPTPGPDTSVSGPRLTLA 567
Query: 241 PRPSQPEPPHR 251
P P PP R
Sbjct: 568 LAPGPPPPPSR 578
Score = 30.4 bits (67), Expect = 1.5
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P +AA PP AA P +RGP PPL +G+PG PL P
Sbjct: 610 PEGGAAASPPPDAELAACHPAAWSRGP------APPL------AFRGAPGAPLPWPPATG 657
Query: 241 P 241
P
Sbjct: 658 P 658
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 43.9 bits (102), Expect = 1e-04
Identities = 65/237 (27%), Positives = 92/237 (38%), Gaps = 27/237 (11%)
Query: 26 QLRDLLQDEPKLD-RIVRLSRKFQGLQLEREACLASNYALAKENLALRPRLEMGRAALAI 84
+L++L + LD RL R+ LQ + +E L LR RL G A+L +
Sbjct: 1281 ELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEV 1340
Query: 85 KYQELREVAENCADKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQMEQLLLGEQSL 144
QEL +VA+ KLQ +E R LG LEEA ++Q++ + L
Sbjct: 1341 MRQEL-QVAQR---KLQE-QEGEFRTRERRLLG----SLEEARGTEKQQLDHA----RGL 1387
Query: 145 EAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAA 204
E L A + A LR + AE + L + +A +A G
Sbjct: 1388 ELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLG 1447
Query: 205 RGPPAVPRSLPPLDSRPVP------------PLKGSPGC-PLGPAPLLSPRPSQPEP 248
R P PR +P +R P L+ SPG P P P SP +P
Sbjct: 1448 RAPSPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDP 1504
Score = 29.3 bits (64), Expect = 3.4
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 13/128 (10%)
Query: 30 LLQDEPKLDRIV-RLSRKFQGLQ-----LEREACLASNYALAKENLALRPRLEMGRAALA 83
L QD+ L+R+V +L + LQ E+EA +A E L L E+ R L
Sbjct: 748 LAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQ--EVARQGLE 805
Query: 84 IKYQELREVAENCADKLQRLEESMHRWSPHCA-----LGWLQAELEEAEQEAEEQMEQLL 138
+ + E +L L + A L + ELE+A +EA+ Q+E L
Sbjct: 806 GSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALE 865
Query: 139 LGEQSLEA 146
+ EA
Sbjct: 866 RAAREKEA 873
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 43.9 bits (102), Expect = 1e-04
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 10/74 (13%)
Query: 177 RSAQPAPTSAADPPKSFPAAAVLPTGAARGPP-AVPRSLPPLDSRPVPPLKGSPGCPLGP 235
R+ + AP +A P + P A P G R PP AV PPL P PP P
Sbjct: 170 RAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPP---------AP 220
Query: 236 APLLSPRPSQPEPP 249
P P QP+PP
Sbjct: 221 PQQQQPPPPQPQPP 234
Score = 37.0 bits (84), Expect = 0.016
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 174 RRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPG-CP 232
R R A A +AA PP P P AA P PR+ + P P PG
Sbjct: 113 RAPRGAPAAAAAAAPPPTPAPPPPPAPVAAA-APARAPRAAAAAATAPPSPGPAQPGPRA 171
Query: 233 LGPAPLLSPRPSQPEPP 249
APL +P P+ PP
Sbjct: 172 QRAAPLAAPPPAPAAPP 188
Score = 37.0 bits (84), Expect = 0.016
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 174 RRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPL 233
R R+A A T+ P + P PP P + PP + P P + P
Sbjct: 147 RAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAA-PPAVAPPAGPRRAPPPAVA 205
Query: 234 GPAPLLSPRPSQPEPPHR 251
P L P P P PP +
Sbjct: 206 AREPPLPPPPQPPAPPQQ 223
Score = 35.8 bits (81), Expect = 0.036
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPT-------GAARGPPAVPRSLPPLDSRPVPPLKGSPG 230
+A P PT A PP + P AA P AA PP+ + P ++ PL P
Sbjct: 124 AAAPPPTPAPPPPPA-PVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPP 182
Query: 231 CPLGPAPLLSPRPSQPEPP 249
P P + P + PP
Sbjct: 183 APAAPPAVAPPAGPRRAPP 201
Score = 35.8 bits (81), Expect = 0.036
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 119 LQAELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQA--EKLQELL---- 172
L+ E EE + E E++ + + G + E+ PA + L R Q+ E+++E
Sbjct: 326 LEKEEEEDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGERGPQSAKERVKEWTPCGP 385
Query: 173 -RRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP-VPPLKGSPG 230
+ ++ PAP S + F AA+ G P S P+ P P L G+ G
Sbjct: 386 HQGQDEGRGPAPGSGTR--QVFSMAAMNKEGGTASVATGPDSPSPVPLPPGKPALPGADG 443
Query: 231 CPLGPAPLLSPRPSQP 246
P G P +PS P
Sbjct: 444 TPFGCPPGRKEKPSDP 459
Score = 30.0 bits (66), Expect = 2.0
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 11/60 (18%)
Query: 179 AQPAPTSAADP---PKSFPAAAVLPTGAARGPP--------AVPRSLPPLDSRPVPPLKG 227
A P P AA P P + P A P AAR PP A P+ P +P PP +G
Sbjct: 178 AAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEG 237
>gi|8922157 proline rich 13 isoform 1 [Homo sapiens]
Length = 148
Score = 43.9 bits (102), Expect = 1e-04
Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 179 AQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGC-PLGPAP 237
A P P + PP P P GA G PA P PP PVP G PGC PLGP P
Sbjct: 27 AHPPPINPPFPPGPCPP----PPGAPHGNPAFPPGGPP---HPVPQ-PGYPGCQPLGPYP 78
Query: 238 LLSPRPSQPEPP 249
P P+ PP
Sbjct: 79 PPYPPPAPGIPP 90
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 43.5 bits (101), Expect = 2e-04
Identities = 34/85 (40%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 175 RERSAQPAPTSAAD------PPKSFPAAAVLPTGAAR----GPPAVPRSLPPLDSRPVPP 224
R R A P P S A PP S P+ AV P R PPA+P S P S P PP
Sbjct: 305 RGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAP---SGPPPP 361
Query: 225 LKGSPGCPLGPAPLLSPRPSQPEPP 249
P LG P+ P P P PP
Sbjct: 362 ----PPSVLGVGPVAPPPPPPPPPP 382
Score = 37.0 bits (84), Expect = 0.016
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP---VPPLKGSPGCPLGPAP 237
P P ++ PP P +R P A P PP SRP VPP + P P
Sbjct: 292 PPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPP--SRPSVAVPPPPPNRMYPPPPPA 349
Query: 238 LLSPRPSQPEPP 249
L S PS P PP
Sbjct: 350 LPSSAPSGPPPP 361
Score = 32.3 bits (72), Expect = 0.40
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 200 PTGAARGPPAVPRSLPPLDSRPVPPL---KGSPGCPLGPAPLLSPRPSQPEPP 249
P + GPP P PP +S P PP +G+P P AP +P P P P
Sbjct: 280 PPPSRGGPPPPPP--PPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRP 330
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 46/179 (25%)
Query: 74 RLEMGRAALAIKY-QELREVAENCADKLQRLEESMHRWSPHCALGWLQAE--LEEAEQEA 130
+++MG+ +L ++ Q + E+ D QR S SP C W + E L++ E+E
Sbjct: 313 KVKMGQLSLGLESGQGQGQHEESWQDVPQRRVGSGQGGSP-C---WKKQEQKLDDEEEEK 368
Query: 131 EEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPP 190
+E+ E+ GE+ E R AE++ + E P PP
Sbjct: 369 KEEEEKDKEGEEKEE----------------RAVAEEMMPAAEKEEAKLPP-------PP 405
Query: 191 KSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLSPRPSQPEPP 249
+ PA P+ P LPP + P PPL P P+ P PL PS P PP
Sbjct: 406 LTPPA------------PSPPPPLPPPSTSPPPPLCPPPPPPVSPPPL----PSPPPPP 448
Score = 35.4 bits (80), Expect = 0.047
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 30/138 (21%)
Query: 141 EQSLEAFLPAF-QRGRALAHLRRTQAEKLQELLRRRERSAQPAPT---SAADPPKSFPAA 196
E+S +PA R R L +Q + + E ++ P PT + PP+ P
Sbjct: 454 EESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTV 513
Query: 197 A-------------VLPTGAARGPPAV----------PRSLPPLDSRPV--PPLKGSPGC 231
A ++P +AR + P P ++ PV PP+ SP
Sbjct: 514 APKSTTFLKNIRQFIMPVVSARSSRVIKTPRRFMDEDPPKPPKVEVSPVLRPPITTSPPV 573
Query: 232 PLGPAPLLSPRPSQPEPP 249
P PAP+ SP P P PP
Sbjct: 574 PQEPAPVPSP-PRAPTPP 590
Score = 31.6 bits (70), Expect = 0.68
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 19/103 (18%)
Query: 149 PAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGP- 207
PA +RG R QA L ELLRR + A AP S A P + + P G GP
Sbjct: 177 PARKRGEEGTE-RMVQA--LTELLRRAQ--APQAPRSRACEPSTPRRSRGRPPGRPAGPC 231
Query: 208 -------------PAVPRSLPPLDSRPVPPLKGSPGCPLGPAP 237
+P+ PP PV GS C GP P
Sbjct: 232 RRKQQAVVVAEAAVTIPKPEPPPPVVPVKHQTGSWKCKEGPGP 274
Score = 30.4 bits (67), Expect = 1.5
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRS--LPPLDSRPVPPLKGSPGCPLGPAPL 238
P P A PP + PA + R P P L +S PP G+P P P
Sbjct: 625 PPPPPAPSPPPA-PATSSRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPEPEPPP 683
Query: 239 LSPRPSQPEP 248
P++PEP
Sbjct: 684 ADDSPAEPEP 693
Score = 28.9 bits (63), Expect = 4.4
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 13/75 (17%)
Query: 177 RSAQPAPTSAADPPKSFPAAAVLPTGAARGPP--AVPRSLPPLDSRPVPPLKGSPGCPLG 234
RS +P+P + PP + + + + R PP +V +L P PP G
Sbjct: 1912 RSRRPSPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELAPP---------G 1962
Query: 235 PAPLLSPRPSQPEPP 249
PAP SP P + P
Sbjct: 1963 PAP--SPPPPEDLGP 1975
Score = 28.1 bits (61), Expect = 7.6
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Query: 180 QPAPTSAADP-PKSFPAAAV-LPTGAARGPPAVPRSLPPLDSRPVP-------PLKGSPG 230
+P SA P P+SF A + +P + P S PL S P P G P
Sbjct: 1846 RPDSGSAPPPAPRSFSGARIKVPNYSPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVGDPD 1905
Query: 231 CPLGPAPLLSPRPSQPEPP 249
P P P P P PP
Sbjct: 1906 FPAPPRRSRRPSPLAPRPP 1924
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 42.7 bits (99), Expect = 3e-04
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 120 QAELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSA 179
+A++EE+EQ+A E ++ + A Q +A R + ++L+ +++ A
Sbjct: 487 KAKVEESEQKAAEFSKKF-------DEEFTARQEAQAELQKRDEKIKELEAEIQQLRTQA 539
Query: 180 QPAPTSAADPPKSFPAAAVLP-TGAARGPPAVP----RSLPPLDSRPVPPLKGSPGCPLG 234
Q +S+ P PAA LP G PPA P LPP P PPL G G P
Sbjct: 540 QVLSSSSGIPGP--PAAPPLPGVGPPPPPPAPPLPGGAPLPP----PPPPLPGMMGIPPP 593
Query: 235 PAPLLSPRPSQPEPP 249
P P L P PP
Sbjct: 594 PPPPLLFGGPPPPPP 608
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 42.7 bits (99), Expect = 3e-04
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 120 QAELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSA 179
+A++EE+EQ+A E ++ + A Q +A R + ++L+ +++ A
Sbjct: 487 KAKVEESEQKAAEFSKKF-------DEEFTARQEAQAELQKRDEKIKELEAEIQQLRTQA 539
Query: 180 QPAPTSAADPPKSFPAAAVLP-TGAARGPPAVP----RSLPPLDSRPVPPLKGSPGCPLG 234
Q +S+ P PAA LP G PPA P LPP P PPL G G P
Sbjct: 540 QVLSSSSGIPGP--PAAPPLPGVGPPPPPPAPPLPGGAPLPP----PPPPLPGMMGIPPP 593
Query: 235 PAPLLSPRPSQPEPP 249
P P L P PP
Sbjct: 594 PPPPLLFGGPPPPPP 608
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 42.7 bits (99), Expect = 3e-04
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 180 QPAPTSAADPPKSFPAA---------AVLPTGAARGPPAVPR---SLPPLDSRPVPPLKG 227
+P+P+ + +P K FPA AV P GPP PR S P S P P K
Sbjct: 280 KPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKP 339
Query: 228 SPGC---PLGPAPLLSPRPSQPEP 248
+P P P P +SP P +P P
Sbjct: 340 APSVSPGPWKPIPSVSPGPWKPTP 363
Score = 34.3 bits (77), Expect = 0.11
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 32/102 (31%)
Query: 179 AQPAPTSAADPPKSFPAA-----AVLPTGAARGP-PAVPRSL------------------ 214
++PA S+ +PPKS P A +P+ + P P P S+
Sbjct: 177 SKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPET 236
Query: 215 --PPLDSRPVPPLKGSPGCPLGPAPLLSP------RPSQPEP 248
PP S P P+ + P GP+P SP R + PEP
Sbjct: 237 LGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEP 278
Score = 33.5 bits (75), Expect = 0.18
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 170 ELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSP 229
E L S+ +P AA P P+ A P P P S P K P
Sbjct: 235 ETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFP 294
Query: 230 GC---PLGPAPLLSPRPSQPEPP 249
P PAP +SP +P PP
Sbjct: 295 AVSPEPRRPAPAVSPGSWKPGPP 317
Score = 31.6 bits (70), Expect = 0.68
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 180 QPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGP---A 236
Q P ++A+P KS PA ++ G P S P P+ P K PG + P
Sbjct: 115 QKIPCNSAEP-KSIPALSM--ETQKLGSVLSPESPKPTPLTPLEPQK--PGSVVSPELQT 169
Query: 237 PLLSPRPSQ------PEPP 249
PL SP PS+ PEPP
Sbjct: 170 PLPSPEPSKPASVSSPEPP 188
Score = 30.8 bits (68), Expect = 1.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 16/79 (20%)
Query: 177 RSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSR------PVPPLKGSPG 230
+S+ +P+S PP S P GPP + ++ P L PV P PG
Sbjct: 371 KSSSVSPSSWKSPPAS-------PESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPG 423
Query: 231 CPLGP---APLLSPRPSQP 246
PL P +P SP +P
Sbjct: 424 PPLSPEIRSPAGSPELRKP 442
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.4 bits (98), Expect = 4e-04
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 186 AADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP---VPPLKGSPGCPLGP--APLLS 240
A PP++ PA A P PP P + PP + P +PPL+ P P P +PL +
Sbjct: 588 ATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLAT 647
Query: 241 PRPSQP 246
P P P
Sbjct: 648 PSPQAP 653
Score = 38.1 bits (87), Expect = 0.007
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP-VPPLKGSPGCPLGPA 236
++ P SA PP++ P A P PPA P P P VPPL +P + P+
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 237 PLLS-PRPSQPEPP 249
P S P +PP
Sbjct: 772 PPASLPMSPLAKPP 785
Score = 37.4 bits (85), Expect = 0.012
Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPA-VPRSLP--PLDSRPVPPLKGSP--GCPLGP 235
P A PP++ PA A P A PPA P P P S P+ PL P P+
Sbjct: 777 PMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLA 836
Query: 236 APLLSPRPSQPEPP 249
APLL PS P P
Sbjct: 837 APLLQVPPSPPASP 850
Score = 36.6 bits (83), Expect = 0.021
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 189 PPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP---VPPLKGSPGCPLGP--APLLSPRP 243
PP S P A P PP P + PP + P PPL+ P P P +P +P P
Sbjct: 667 PPPSPPVQA--PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 724
Query: 244 SQPEP 248
P P
Sbjct: 725 QAPPP 729
Score = 35.8 bits (81), Expect = 0.036
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 171 LLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPG 230
L R RS + T + P +S P+A P A P+ L L V P +
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAA 293
Query: 231 CPLGP---APLLSPRPS----QPEPP 249
LGP +PL +P PS +P PP
Sbjct: 294 PALGPLSSSPLATPSPSGTKARPVPP 319
Score = 34.7 bits (78), Expect = 0.081
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 155 RALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSL 214
RA AH + + + LQ L + + A P S P A P+G P +
Sbjct: 264 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP------V 317
Query: 215 PPLDSRPVP-PLKGSPGCPLG-PAPLLSPRPSQP 246
PP D+ P P P PL P PL P PS P
Sbjct: 318 PPPDNAATPLPATLPPSPPLATPLPLAPPSPSAP 351
Score = 34.7 bits (78), Expect = 0.081
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 18/89 (20%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRP---VPPLKGSPGCPLG 234
S P S A P + P V P+ A PP P + PP + P PPL+ P P
Sbjct: 686 SPSATPPSQAPPSLAAPPLQVPPSPPA-SPPMSPSATPPPQAPPPLAAPPLQVPPSPPAS 744
Query: 235 PA------------PLLSPRPSQ--PEPP 249
P PLL+ P Q P PP
Sbjct: 745 PPMSPSATPPPRVPPLLAAPPLQVPPSPP 773
Score = 34.7 bits (78), Expect = 0.081
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 183 PTSAADPPKSFPAA--AVLPTGA-ARGPPAVPRSL--PPLDSRPVPPLK------GSPGC 231
P A PP P + A LP A+ PP P +L PPL + P PP SP
Sbjct: 758 PPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 817
Query: 232 PLGPAPLLSPRPSQP 246
L +PL +P P P
Sbjct: 818 SLPMSPLATPPPQAP 832
Score = 33.1 bits (74), Expect = 0.24
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P A PP++ P VL + PP+ P S P L + PP G GP L+
Sbjct: 820 PMSPLATPPPQAPP---VLAAPLLQVPPSPPAS-PTLQAPRRPPTPGPDTSVSGPRLTLA 875
Query: 241 PRPSQPEPPHR 251
P P PP R
Sbjct: 876 LAPGPPPPPSR 886
Score = 31.2 bits (69), Expect = 0.89
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P A PP++ P A+ P A PPA P L PL + P P + L AP S
Sbjct: 610 PLSPLATPPPQAPPXLALPPLQAPPSPPASP-PLSPL-ATPSPQAPNALAVHLLQAP-FS 666
Query: 241 PRPSQP 246
P PS P
Sbjct: 667 PPPSPP 672
Score = 30.8 bits (68), Expect = 1.2
Identities = 29/90 (32%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 161 RRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPP-AVPRSLPPLDS 219
R+ A L L + P+ T A P AA LP PP A P L P
Sbjct: 289 RKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSP 348
Query: 220 RPVPPLKGSPGCPLGPAPLLSPRPSQPEPP 249
P L+ P P P P +P PS PP
Sbjct: 349 SAPPSLQTLPSPPATP-PSQAP-PSMTTPP 376
Score = 30.8 bits (68), Expect = 1.2
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 180 QPAPTSAADPPKSFPAAAVLPTGAA----RGPPAVPRSLPPLDSRPVPPLKGSPGCPLGP 235
Q P+ PP P++ P A PP PPL PP + P L P
Sbjct: 570 QAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPP 629
Query: 236 APLLSPRPSQPEPP 249
L PS P P
Sbjct: 630 ---LQAPPSPPASP 640
Score = 30.4 bits (67), Expect = 1.5
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS 240
P +AA PP AA P +RGP PPL +G+PG PL P
Sbjct: 918 PEGGAAASPPPDAELAACHPAAWSRGP------APPL------AFRGAPGAPLPWPPATG 965
Query: 241 P 241
P
Sbjct: 966 P 966
Score = 28.9 bits (63), Expect = 4.4
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAP 237
S Q P+ A PP P + P A PP++ +++PP+ VP SP P+P
Sbjct: 353 SLQTLPSPPATPPSQAPPSMTTPPMQA--PPSL-QTIPPIQ---VPHSLTSPSLQAPPSP 406
Query: 238 L 238
L
Sbjct: 407 L 407
Score = 28.5 bits (62), Expect = 5.8
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 176 ERSAQPAPTSAADPPKSF--PAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPL 233
E + AP S PP S P LP+ A PP + + PL + P +P CP
Sbjct: 513 ETQSSLAPPSLQTPPASLTTPPLENLPSLA---PPPLQTASAPLTT----PHLETPPCP- 564
Query: 234 GPAPLLSPRPSQPEPP 249
P PL +P PP
Sbjct: 565 APCPLQAPPSPLTTPP 580
>gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4
[Homo sapiens]
Length = 809
Score = 42.0 bits (97), Expect = 5e-04
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 118 WLQA-ELEEAEQEAEEQMEQLLLGEQSLEAFLPA--FQRGRALAHLRRTQAEKLQELLRR 174
W+Q L+E E E E + ++L L +RG + +L + +
Sbjct: 24 WIQGLPLKEEEILPEPGSETPTVASEALAELLHGALLRRGPEMGYLPGSDRDPTLATPPA 83
Query: 175 RERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSL--PPLDSRPVPPLKGSPGCP 232
+ A P+ A +P AV P G P P L PP + P PP SPG P
Sbjct: 84 GQTLAVPSLPRATEPGTGPLTTAVTPNGVRGAGPTAPELLTPPPGTTAPPPPSPASPGPP 143
Query: 233 LGP 235
LGP
Sbjct: 144 LGP 146
>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
[Homo sapiens]
Length = 910
Score = 42.0 bits (97), Expect = 5e-04
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 118 WLQA-ELEEAEQEAEEQMEQLLLGEQSLEAFLPA--FQRGRALAHLRRTQAEKLQELLRR 174
W+Q L+E E E E + ++L L +RG + +L + +
Sbjct: 24 WIQGLPLKEEEILPEPGSETPTVASEALAELLHGALLRRGPEMGYLPGSDRDPTLATPPA 83
Query: 175 RERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSL--PPLDSRPVPPLKGSPGCP 232
+ A P+ A +P AV P G P P L PP + P PP SPG P
Sbjct: 84 GQTLAVPSLPRATEPGTGPLTTAVTPNGVRGAGPTAPELLTPPPGTTAPPPPSPASPGPP 143
Query: 233 LGP 235
LGP
Sbjct: 144 LGP 146
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 42.0 bits (97), Expect = 5e-04
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 125 EAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPT 184
+ +Q A E+ E+L L EQ E ++ +LA L T + + + PAP
Sbjct: 18 QQQQRAREEQERLRL-EQEREQ---EQKKANSLARLAHTLPVEEPRMEAPPLPLSPPAPP 73
Query: 185 SAADPPKSFPAA-AVLPTGAARG-------PPAVPRSLPPLDSRP-VPPLKGSPGCPL-G 234
A PP + PA V+P PP +P + PL P P L G+PG +
Sbjct: 74 PAPPPPLATPAPLTVIPIPVVTNSPQPLPPPPPLPAAAQPLPLAPRQPALVGAPGLSIKE 133
Query: 235 PAPLLSPRPSQPEP 248
PAPL S RP P P
Sbjct: 134 PAPLPS-RPQVPTP 146
Score = 36.2 bits (82), Expect = 0.028
Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 134 MEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSF 193
+E LL + LE QR R R + E+ QE ++ A+ A T + P+
Sbjct: 3 IETLLEAARFLEWQAQQQQRAREEQERLRLEQEREQEQ-KKANSLARLAHTLPVEEPRM- 60
Query: 194 PAAAVLPTGAARGPPAVPRSLP---PLDSRPVPPLKGSPGCPLGPAPLLSPRPSQPEP 248
A LP PPA P L PL P+P + SP PL P P L P +QP P
Sbjct: 61 -EAPPLPLSPPAPPPAPPPPLATPAPLTVIPIPVVTNSPQ-PLPPPPPL-PAAAQPLP 115
Score = 31.2 bits (69), Expect = 0.89
Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 9/153 (5%)
Query: 88 ELREVAENCADKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQMEQLLL--GEQSLE 145
E+ +A QRL E H S + + L + Q ++Q GE +++
Sbjct: 281 EMERLAREKIATQQRLAELKHELSQWMDVLEIDRVLRQTGQPEDDQASTSTASEGEDNID 340
Query: 146 AFLPAFQRGRALAHL-RRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAA 204
+ + G L R Q E L+ L + P P P P + LP
Sbjct: 341 EDMEEDRAGLGPPKLSHRPQPELLKSTLPPPSTTPAPLPPH----PHPHPHSVALPPAHL 396
Query: 205 RGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAP 237
P+ PL + P PP +P L PAP
Sbjct: 397 PVQQQQPQQKTPLPAPPPPP--AAPAQTLVPAP 427
Score = 30.8 bits (68), Expect = 1.2
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 143 SLEAFLPA--FQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLP 200
S+E L A F +A R + ++ L + RE+ + A + A A LP
Sbjct: 2 SIETLLEAARFLEWQAQQQQRAREEQERLRLEQEREQEQKKANSLAR-------LAHTLP 54
Query: 201 TGAAR-GPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLL--SPRPSQPEPP 249
R P +P S P P PPL + P P++ SP+P P PP
Sbjct: 55 VEEPRMEAPPLPLSPPAPPPAPPPPLATPAPLTVIPIPVVTNSPQPLPPPPP 106
Score = 27.7 bits (60), Expect = 9.9
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 115 ALGWLQAELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRR 174
AL ++Q+ L+ E+E E +ME+L + + + QR L H +Q + E+ R
Sbjct: 264 ALRYIQS-LKRKEKEYEHEMERLAREKIATQ------QRLAELKH-ELSQWMDVLEIDRV 315
Query: 175 RERSAQP----APTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPG 230
++ QP A TS A + + A GPP L RP P L S
Sbjct: 316 LRQTGQPEDDQASTSTASEGEDNIDEDMEEDRAGLGPPK-------LSHRPQPELLKS-- 366
Query: 231 CPLGPAPLLSPRPSQPEP-PH 250
P P +P P P P PH
Sbjct: 367 --TLPPPSTTPAPLPPHPHPH 385
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 119 LQAELEEAE-------QEAEEQMEQLLLGEQSLEAFLPAFQRGRA-LAHLRRTQAEKLQE 170
LQ +LE+ E QE EE M+ L ++ LE ++ + +A L +L E
Sbjct: 462 LQQKLEKKERECDAKTQEKEEMMQTLNKMKEKLEKETTEHKQVKQQVADL----TAQLHE 517
Query: 171 LLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPG 230
L RR ++ P S P FP++ PP +P + P P+PP G P
Sbjct: 518 LSRRAVCASIPGGPSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPP--GGPP 575
Query: 231 CPLGPAPL--LSPRPSQP 246
P GP PL + P P P
Sbjct: 576 PPPGPPPLGAIMPPPGAP 593
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 41.6 bits (96), Expect = 7e-04
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 177 RSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAV---PR---SLPPLDSRPVPPLKGSP- 229
+ A P + PK PAA LP GA P A P+ + P L P PP P
Sbjct: 1030 KGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPS 1089
Query: 230 --GCPLGPAPLLSPRPSQPEPP 249
G P P+P +P P PP
Sbjct: 1090 PKGGPATPSPKGAPMPPAATPP 1111
Score = 37.7 bits (86), Expect = 0.010
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 181 PAPTSAADP-PKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPL-KGSPGCPLGPAPL 238
P P + P PK PAA P GA+ P A P S P S PL KG+P P P
Sbjct: 1009 PTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS--PKGSPAATPLPKGAPTTPAATLPS 1066
Query: 239 LSPRPSQP 246
P+ P
Sbjct: 1067 PKGGPATP 1074
Score = 36.2 bits (82), Expect = 0.028
Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 181 PAPTSAADP-PKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLL 239
P P +A P PK PA P GA P A P S P PP KG+P P P
Sbjct: 1080 PTPPAATPPSPKGGPATPS-PKGAPMPPAATPPS--PKGGLATPPHKGAPTTPAATPP-- 1134
Query: 240 SPRPSQPEPP 249
SP+ PP
Sbjct: 1135 SPKGGLATPP 1144
Score = 35.4 bits (80), Expect = 0.047
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRS------LPPLDSRPVPPLKGSP-- 229
S+ P A PK PA+ P GA P A P S P P PP P
Sbjct: 915 SSSPKKARATPAPKGIPASPS-PKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973
Query: 230 -GCPLGPAPLLSPRPSQPEPP 249
G P P+P +P P PP
Sbjct: 974 KGGPATPSPKGAPTPPAATPP 994
Score = 34.3 bits (77), Expect = 0.11
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 186 AADPPKSFPAAAVLPTGAARGPPAV--PRSLPPLDSRPVPPLKGSPGCPLGPAPLLSPRP 243
A P K P AV+ + +G PA P+ P + P KGSPG P P +P P
Sbjct: 1279 ATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGT---PPPKGAPTP 1335
Query: 244 SQPEPP 249
PP
Sbjct: 1336 PAVTPP 1341
Score = 33.9 bits (76), Expect = 0.14
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
Query: 179 AQPAPTSAADPPKSFPA------AAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCP 232
A P+P A P + P A P GA P A P S P PP KG+P P
Sbjct: 1210 ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS--PKGGPATPPPKGAPTPP 1267
Query: 233 LGPAPLLSPRPSQPEPPHR 251
P L + PPH+
Sbjct: 1268 AATPPSL--KGGLATPPHK 1284
Score = 31.2 bits (69), Expect = 0.89
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Query: 178 SAQPAPTSAADPPKS------FPAAAVLPTGAARGPPAVPRSLPPLDS---RPVPPLKGS 228
S + APT A P S P+ PT A PP+ P+ P S P PP
Sbjct: 935 SPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPS-PKGGPATPSPKGAPTPPAATP 993
Query: 229 P---GCPLGPAPLLSPRPSQPEPP 249
P G P P+P +P P PP
Sbjct: 994 PSPKGGPATPSPKGAPTPPAVTPP 1017
Score = 30.8 bits (68), Expect = 1.2
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 182 APTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPV--PPLKGSPGCPLGPAPLL 239
APT+ A P S L T +G P P + PP + PP KG+P P P
Sbjct: 1125 APTTPAATPPSPKGG--LATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1182
Query: 240 SPRPSQPEP 248
+ P P
Sbjct: 1183 KGGLATPSP 1191
Score = 30.8 bits (68), Expect = 1.2
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 182 APTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLSP 241
APT A P S P PAV P P KG+P P P SP
Sbjct: 1263 APTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPP--SP 1320
Query: 242 RPSQPEPP 249
+ S PP
Sbjct: 1321 KGSPGTPP 1328
Score = 30.8 bits (68), Expect = 1.2
Identities = 29/94 (30%), Positives = 33/94 (35%), Gaps = 24/94 (25%)
Query: 181 PAPTSAADP-PKSFPAAAVLPTGAARGPPAVPRS------LPPLDSRPVPPL------KG 227
P P P PK PA + P GA P A P S PP P PP KG
Sbjct: 1287 PNPAVVTPPSPKGGPATSP-PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345
Query: 228 SP----------GCPLGPAPLLSPRPSQPEPPHR 251
+P G P P+ P P P H+
Sbjct: 1346 TPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHK 1379
Score = 30.4 bits (67), Expect = 1.5
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 178 SAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPP----LKGSP-GCP 232
S + AP ++A PK PA T +++G P +P PP P P SP P
Sbjct: 1442 SLKKAPATSA--PKGGPA-----TPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAP 1494
Query: 233 LGPAPLLSPR-----PSQPE 247
PAP+ +P PS P+
Sbjct: 1495 ATPAPMGAPTLPAVIPSSPK 1514
Score = 30.0 bits (66), Expect = 2.0
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 13/78 (16%)
Query: 182 APTSAADPPKSFPAAAVLPTGAARGPPAVPR----------SLPPLDSRPVPPLKGSPGC 231
+P PPK P +V+ + PA P S P +R P KG
Sbjct: 874 SPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKG---I 930
Query: 232 PLGPAPLLSPRPSQPEPP 249
P P+P +P P PP
Sbjct: 931 PASPSPKGAPTPPAATPP 948
Score = 28.1 bits (61), Expect = 7.6
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 19/94 (20%)
Query: 176 ERSAQPAPTSAADPPKSFP-----AAAVLPTGAAR----------GPPAVPRSLPPLDSR 220
+ S P+P++ A P P + LP G A GPP P +L
Sbjct: 63 QASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPM 122
Query: 221 PVPPLKGSP--GCPLGPAPLL--SPRPSQPEPPH 250
P LKG+P PL L S + S PP+
Sbjct: 123 IAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPN 156
Score = 28.1 bits (61), Expect = 7.6
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 175 RERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLG 234
+E A P+ A+ PP AV P+ P +PP + P P +P
Sbjct: 1568 KEAPATPSSKEASSPP------AVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTP 1621
Query: 235 PAPLLSPRPSQPE 247
P+P P P+
Sbjct: 1622 PSPEKGPATPAPK 1634
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 41.2 bits (95), Expect = 9e-04
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 179 AQPAPTSAADPP--KSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPA 236
A P P +A PP P LP ++ GPP P PPL + P PP G P P P
Sbjct: 668 APPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPP-PPLPNSPAPPNPGGPP-PAPPP 725
Query: 237 PLLSPRP 243
P L+P P
Sbjct: 726 PGLAPPP 732
Score = 38.1 bits (87), Expect = 0.007
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 172 LRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPR----SLPPLDSRPVPPLKG 227
L+ E A + PP S P LP+G PA P + PPL P PP
Sbjct: 631 LQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPL 690
Query: 228 SPGCPLGPAPLLSPRP--SQPEPPH 250
P GP P P P + P PP+
Sbjct: 691 PPPSSAGPPPPPPPPPLPNSPAPPN 715
Score = 37.7 bits (86), Expect = 0.010
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 13/93 (13%)
Query: 166 EKLQELLRRRERSAQPAPTSAADPP-------KSFPAAAVLPTGAARG---PPAVPRSLP 215
+ ++ + ++++ P P S PP PA + P A PP P LP
Sbjct: 632 QPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLP 691
Query: 216 PLDSRPVPPLKGSPGCPLGPAPLLSPRPSQPEP 248
P S PP P P PAP P P P P
Sbjct: 692 PPSSAGPPPPPPPPPLPNSPAP---PNPGGPPP 721
Score = 29.6 bits (65), Expect = 2.6
Identities = 26/77 (33%), Positives = 27/77 (35%), Gaps = 14/77 (18%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKG--------SPGCP 232
P P+SA PP P LP A P P PP PP G S CP
Sbjct: 691 PPPSSAGPPPP--PPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFFGLGSSSSQCP 748
Query: 233 LGPAPLLSPRPSQPEPP 249
PA PS P P
Sbjct: 749 RKPA----IEPSCPMKP 761
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 41.2 bits (95), Expect = 9e-04
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 179 AQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPL 238
A+P PT A P P P G AR P P S P+ ++PVP L+GSP PL
Sbjct: 1198 AEPPPTDLAHLPPLPP-----PEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPL 1252
Query: 239 LSPRPSQPE 247
P P PE
Sbjct: 1253 --PGPGSPE 1259
Score = 33.9 bits (76), Expect = 0.14
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCP--LGPAPL 238
P P PK A A LP+G+A PA P +P L PG P LG +P
Sbjct: 1272 PKPPPPPTAPKPVKAVAGLPSGSAGPSPA-----PSPARQPPAALAKPPGTPPSLGASPA 1326
Query: 239 LSPRPSQP 246
P P P
Sbjct: 1327 KPPSPGAP 1334
Score = 32.3 bits (72), Expect = 0.40
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 181 PAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDS-RPVPPLKGSPGCPLGPAPLL 239
P PTS P P + + PP P+ PP + +PV + G P GP+P
Sbjct: 1243 PTPTSKKVPLPG-PGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAP 1301
Query: 240 SPRPSQP 246
SP P
Sbjct: 1302 SPARQPP 1308
Score = 31.6 bits (70), Expect = 0.68
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 21/101 (20%)
Query: 163 TQAEKLQELLRRRERSAQPAPTSAADPPKSF-----PAAAVLPTGAARGPPAVPRSLPPL 217
T+++ ++ + +ER A P P PP S P GPP +P PP
Sbjct: 1143 TESDTVKRRPKAKEREAGPEPP----PPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPA 1198
Query: 218 DSRP--------VPPLKGSPGCPLGPAPLLSPRP--SQPEP 248
+ P +PP +G P P +SP+P +QP P
Sbjct: 1199 EPPPTDLAHLPPLPPPEGEARKPAKPP--VSPKPVLTQPVP 1237
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 41.2 bits (95), Expect = 9e-04
Identities = 36/103 (34%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 162 RTQAEKLQELLRR------RERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLP 215
R + +LQ LL R R +SA P A +P P A P PP PR
Sbjct: 747 RPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRA--PPPPPPPPPPPPRMRS 804
Query: 216 PLDSRP----VP-----PLKGSPGCPLGPAPLLSPRPSQPEPP 249
P +RP VP P+ SP P GP+ SPR P PP
Sbjct: 805 PQPARPGSAAVPGAAFAPIPRSP-LPAGPSSCTSPRSPLPAPP 846
Score = 33.9 bits (76), Expect = 0.14
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 176 ERSAQPA-PTSAADPPKSFPAAAVLPT--GAARGPPAVPRSLPPLDSRPVPPLKGSPGCP 232
ERS P P + A PP A + AAR A PRS + RP P + P P
Sbjct: 734 ERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPP 793
Query: 233 LGPAP---LLSPRPSQP 246
P P + SP+P++P
Sbjct: 794 PPPPPPPRMRSPQPARP 810
Score = 30.8 bits (68), Expect = 1.2
Identities = 30/86 (34%), Positives = 35/86 (40%), Gaps = 16/86 (18%)
Query: 180 QPAPTS--AADP--PKSFPAAAVLPTGAARGPPAVP---RSLPPLDSRP---------VP 223
+PA S AA P P S LP GA PA+P RS P L + P V
Sbjct: 579 EPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVS 638
Query: 224 PLKGSPGCPLGPAPLLSPRPSQPEPP 249
P G P+ P+ SPR Q P
Sbjct: 639 PPYGGDISPVSPSRAWSPRAKQAPRP 664
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 41.2 bits (95), Expect = 9e-04
Identities = 32/147 (21%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 34 EPKLDRIVRLSRKFQGLQLEREACLASNYALAKENLALRPRLEMGRAALAIKYQELREVA 93
+ ++DR++ + ++ + + +++ +A E+L LR + + +K+ + E
Sbjct: 723 QAEVDRLLEILKEVENEKNDKDKKIAE-----LESLTLRHMKDQNKKVANLKHNQQLEKK 777
Query: 94 ENCA--DKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQMEQLLLGEQSLEAFLPAF 151
+N ++++R E+SM S H + L LE+ QE + +L +QSL
Sbjct: 778 KNAQLLEEVRRREDSMADNSQHLQIEELMNALEKTRQELDATKARLASTQQSLA------ 831
Query: 152 QRGRALAHLRRTQAEKLQELLRRRERS 178
++ LA+LR + ++L+E+L ++ +
Sbjct: 832 EKEAHLANLRIERRKQLEEILEMKQEA 858
>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4
[Homo sapiens]
Length = 456
Score = 41.2 bits (95), Expect = 9e-04
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 25/93 (26%)
Query: 180 QPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSR-----PVPPLK-GSPG--- 230
Q +P +AA+PP S P ++LPT G P+ P + PPLD+ P PP + +PG
Sbjct: 66 QESPGAAAEPPPSPPPPSLLPTPVRLGAPSQPPAPPPLDNASHGEPPEPPEQPAAPGTDG 125
Query: 231 ----------------CPLGPAPLLSPRPSQPE 247
PL P+ +++ + + PE
Sbjct: 126 WGLPSGGGGAQDAWLRTPLAPSEMITAQSALPE 158
Score = 35.4 bits (80), Expect = 0.047
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 193 FPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLSPRPSQ-PEPPHR 251
FP A GAA PP P PP P P G+P P P PL + + PEPP +
Sbjct: 61 FPLALQESPGAAAEPPPSP---PPPSLLPTPVRLGAPSQPPAPPPLDNASHGEPPEPPEQ 117
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 41.2 bits (95), Expect = 9e-04
Identities = 52/172 (30%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 80 AALAIKYQELREVAENCADKLQRL--EESMHRWSPHCALGWLQAELEEAEQEAEEQMEQL 137
AA A+K + L V E L L E M + L EE E + + E L
Sbjct: 898 AAAAVKAKHLAAVEERKIKSLVALLVETQMKK------LEIKLRHFEELETIMDREREAL 951
Query: 138 LLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAA 197
Q L A AF + R + + Q++ ++++ QP P A PP S P
Sbjct: 952 EYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQ---QPPP---ALPPGSQP--- 1002
Query: 198 VLPTGAARGPPAVPR-SLPPLDSRPVPPLKGSPGCPLGPAPLLSPRPSQPEP 248
+ PTGAA GPPAV ++ P P P G+P LGP+ + S P
Sbjct: 1003 IPPTGAA-GPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 41.2 bits (95), Expect = 9e-04
Identities = 52/172 (30%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 80 AALAIKYQELREVAENCADKLQRL--EESMHRWSPHCALGWLQAELEEAEQEAEEQMEQL 137
AA A+K + L V E L L E M + L EE E + + E L
Sbjct: 867 AAAAVKAKHLAAVEERKIKSLVALLVETQMKK------LEIKLRHFEELETIMDREREAL 920
Query: 138 LLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAA 197
Q L A AF + R + + Q++ ++++ QP P A PP S P
Sbjct: 921 EYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQ---QPPP---ALPPGSQP--- 971
Query: 198 VLPTGAARGPPAVPR-SLPPLDSRPVPPLKGSPGCPLGPAPLLSPRPSQPEP 248
+ PTGAA GPPAV ++ P P P G+P LGP+ + S P
Sbjct: 972 IPPTGAA-GPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1022
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,129,868
Number of Sequences: 37866
Number of extensions: 729198
Number of successful extensions: 11786
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 1103
Number of HSP's that attempted gapping in prelim test: 7241
Number of HSP's gapped (non-prelim): 4479
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.