Guide to the Human Genome
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Name: SEZ6L2 Sequence: fasta or formatted (809aa) NCBI GI: 166235140
Description:

seizure related 6 homolog (mouse)-like 2 isoform 4

Referenced in:

Additional Brain Proteins
Additional Interaction Domain Families

Other entries for this name:
alt prot [910aa] seizure related 6 homolog (mouse)-like 2 isoform 2
alt prot [840aa] seizure related 6 homolog (mouse)-like 2 isoform 3
alt prot [853aa] seizure related 6 homolog (mouse)-like 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         53           2
 C cysteine            3.1         25           1
 D aspartate           4.3         35           2
 E glutamate           7.4         60           3
 F phenylalanine       2.5         20           2
 G glycine            10.0         81           2
 H histidine           2.3         19           2
 I isoleucine          3.1         25           2
 K lysine              1.6         13           1
 L leucine            11.2         91           3
 M methionine          1.1          9           1
 N asparagine          2.3         19           1
 P proline            12.0         97           4
 Q glutamine           3.3         27           1
 R arginine            4.6         37           3
 S serine              6.7         54           2
 T threonine           8.0         65           4
 V valine              5.2         42           2
 W tryptophan          1.5         12           1
 Y tyrosine            3.1         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   seizure related 6 homolog (mouse)-like 2 isoform 4 ... 
SEZ6L2                0.792   seizure related 6 homolog (mouse)-like 2 isoform 1 [H...
SEZ6L2                0.772   seizure related 6 homolog (mouse)-like 2 isoform 3 ...
SEZ6L2                0.772   seizure related 6 homolog (mouse)-like 2 isoform 2 ...
SEZ6                  0.397   seizure related 6 homolog isoform 2 
SEZ6L                 0.390   seizure related 6 homolog (mouse)-like precursor [Ho...
SEZ6                  0.387   seizure related 6 homolog isoform 1 
CSMD1                 0.102   CUB and Sushi multiple domains 1 
CSMD3                 0.101   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.101   CUB and Sushi multiple domains 3 isoform 1 
CSMD2                 0.100   CUB and Sushi multiple domains 2 
CSMD3                 0.100   CUB and Sushi multiple domains 3 isoform 3 
CR1                   0.046   complement receptor 1 isoform S precursor 
CR1                   0.046   complement receptor 1 isoform F precursor 
SVEP1                 0.044   polydom 
CD55                  0.043   decay accelerating factor for complement isoform 2 ...
CD55                  0.043   decay accelerating factor for complement isoform 1 p...
CR1L                  0.040   complement component (3b/4b) receptor 1-like 
SELP                  0.038   selectin P precursor 
CD46                  0.034   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.034   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.034   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.033   CD46 antigen, complement regulatory protein isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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