VPS37A 14624

Name: VPS37A	Sequence: fasta or formatted (372aa)		NCBI GI: 223555921
Description: hepatocellular carcinoma related protein 1 isoform 2		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [397aa] hepatocellular carcinoma related protein 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 26 2 C cysteine 0.8 3 1 D aspartate 4.3 16 2 E glutamate 7.5 28 3 F phenylalanine 4.3 16 1 G glycine 3.0 11 2 H histidine 2.7 10 2 I isoleucine 4.0 15 2 K lysine 5.9 22 2 L leucine 11.8 44 3 M methionine 3.0 11 1 N asparagine 3.0 11 2 P proline 8.6 32 2 Q glutamine 6.5 24 3 R arginine 3.2 12 2 S serine 11.8 44 3 T threonine 5.6 21 2 V valine 4.3 16 1 W tryptophan 0.5 2 1 Y tyrosine 2.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatocellular carcinoma related protein 1 isoform ... VPS37A 0.978 hepatocellular carcinoma related protein 1 isoform ... VPS37B 0.088 vacuolar protein sorting 37B VPS37C 0.076 vacuolar protein sorting 37C VPS37D 0.069 vacuolar protein sorting 37D TSG101 0.021 tumor susceptibility gene 101 UBQLN1 0.021 ubiquilin 1 isoform 1 WNK1 0.020 WNK lysine deficient protein kinase 1 POLR2A 0.020 DNA-directed RNA polymerase II A KTN1 0.018 kinectin 1 isoform a KTN1 0.018 kinectin 1 isoform c KTN1 0.018 kinectin 1 isoform a MYO9A 0.018 myosin IXA KIF20B 0.018 M-phase phosphoprotein 1 MYH9 0.017 myosin, heavy polypeptide 9, non-muscle CCDC30 0.017 coiled-coil domain containing 30 TEAD3 0.017 TEA domain family member 3 TRAK2 0.015 trafficking protein, kinesin binding 2 NUP62 0.015 nucleoporin 62kDa NUP62 0.015 nucleoporin 62kDa NUP62 0.015 nucleoporin 62kDa NUP62 0.015 nucleoporin 62kDa MYH13 0.014 myosin, heavy polypeptide 13, skeletal muscle [Homo... CEP250 0.014 centrosomal protein 2 LOC390937 0.014 PREDICTED: similar to hCG2040171 LOC390937 0.014 PREDICTED: similar to hCG2040171 LOC390937 0.014 PREDICTED: similar to hCG2040171 GOLGA8G 0.014 golgi autoantigen, golgin subfamily a, 8G RRBP1 0.014 ribosome binding protein 1 RRBP1 0.014 ribosome binding protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.