Guide to the Human Genome
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Name: LOC100132107 Sequence: fasta or formatted (130aa) NCBI GI: 239749383
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {306aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6          6           1
 C cysteine            5.4          7           1
 D aspartate           1.5          2           1
 E glutamate           1.5          2           1
 F phenylalanine       3.1          4           1
 G glycine             1.5          2           1
 H histidine           6.2          8           1
 I isoleucine         16.2         21           1
 K lysine              4.6          6           1
 L leucine             5.4          7           2
 M methionine          3.1          4           1
 N asparagine          0.0          0           0
 P proline             3.8          5           2
 Q glutamine           3.1          4           1
 R arginine            3.8          5           1
 S serine              4.6          6           1
 T threonine           8.5         11           1
 V valine              6.2          8           1
 W tryptophan          0.0          0           0
 Y tyrosine           16.9         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132107          0.427   PREDICTED: hypothetical protein 
LOC100291872          0.310   PREDICTED: hypothetical protein XP_002345798 
LOC100294441          0.310   PREDICTED: hypothetical protein 
LOC100288317          0.306   PREDICTED: hypothetical protein XP_002342505 
LOC100129642          0.298   PREDICTED: hypothetical protein 
LOC100131203          0.294   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.294   PREDICTED: similar to serine/threonine-protein kina...
LOC100132983          0.294   PREDICTED: hypothetical protein 
LOC100129825          0.294   PREDICTED: hypothetical protein 
LOC100134576          0.290   PREDICTED: hypothetical protein 
LOC100131203          0.290   PREDICTED: hypothetical protein 
LOC100133515          0.290   PREDICTED: hypothetical protein 
LOC100134060          0.286   PREDICTED: hypothetical protein 
LOC100133975          0.286   PREDICTED: hypothetical protein, partial 
LOC100128473          0.286   PREDICTED: hypothetical protein 
LOC100132782          0.282   PREDICTED: hypothetical protein 
LOC100134325          0.282   PREDICTED: hypothetical protein 
LOC100133807          0.282   PREDICTED: similar to serine/threonine-protein kina...
LOC100134332          0.278   PREDICTED: hypothetical protein, partial 
LOC100132679          0.275   PREDICTED: hypothetical protein 
LOC100292028          0.275   PREDICTED: hypothetical protein XP_002346286 
LOC100134395          0.275   PREDICTED: hypothetical protein, partial 
LOC100294466          0.275   PREDICTED: hypothetical protein, partial 
LOC100133547          0.275   PREDICTED: hypothetical protein 
LOC100288460          0.275   PREDICTED: hypothetical protein XP_002342485 
LOC100129825          0.271   PREDICTED: hypothetical protein 
LOC100133741          0.271   PREDICTED: hypothetical protein 
LOC100133226          0.271   PREDICTED: hypothetical protein 
LOC100133450          0.267   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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