Search of human proteins with 239749375

Search of human proteins with 239749375

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749375 PREDICTED: hypothetical protein XP_002347018 [Homo
sapiens]
         (265 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749375 PREDICTED: hypothetical protein XP_002347018 [Homo ...   531   e-151
gi|239743512 PREDICTED: hypothetical protein XP_002342879 [Homo ...   531   e-151
gi|239754838 PREDICTED: hypothetical protein [Homo sapiens]           528   e-150
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]            49   6e-06
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ...    49   6e-06
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ...    49   6e-06
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      47   1e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens]                   46   4e-05
gi|237757308 synaptojanin 1 isoform b [Homo sapiens]                   46   4e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni...    44   1e-04
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ...    44   1e-04
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ...    44   1e-04
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ...    44   1e-04
gi|23510368 homeobox D11 [Homo sapiens]                                44   2e-04
gi|169790811 SHC (Src homology 2 domain containing) transforming...    43   3e-04
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      42   4e-04
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]            42   4e-04
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]            42   4e-04
gi|4557595 forkhead box F2 [Homo sapiens]                              42   4e-04
gi|167234419 thyroid hormone receptor associated protein 3 [Homo...    42   4e-04
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|20070107 orthodenticle homeobox 1 [Homo sapiens]                    41   0.001
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo...    41   0.001
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo...    41   0.001
gi|90819229 cutaneous T-cell lymphoma-associated antigen 1 isofo...    40   0.002
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|38045915 pregnancy-associated plasma protein A preproprotein ...    40   0.003
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003

>gi|239749375 PREDICTED: hypothetical protein XP_002347018 [Homo
           sapiens]
          Length = 265

 Score =  531 bits (1367), Expect = e-151
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL 60
           MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL
Sbjct: 1   MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL 60

Query: 61  RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRG 120
           RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRG
Sbjct: 61  RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRG 120

Query: 121 PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP 180
           PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP
Sbjct: 121 PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP 180

Query: 181 PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK 240
           PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK
Sbjct: 181 PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK 240

Query: 241 GPPTAYHARLPLAVETATDKETSPS 265
           GPPTAYHARLPLAVETATDKETSPS
Sbjct: 241 GPPTAYHARLPLAVETATDKETSPS 265


>gi|239743512 PREDICTED: hypothetical protein XP_002342879 [Homo
           sapiens]
          Length = 265

 Score =  531 bits (1367), Expect = e-151
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL 60
           MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL
Sbjct: 1   MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL 60

Query: 61  RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRG 120
           RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRG
Sbjct: 61  RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRG 120

Query: 121 PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP 180
           PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP
Sbjct: 121 PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP 180

Query: 181 PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK 240
           PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK
Sbjct: 181 PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK 240

Query: 241 GPPTAYHARLPLAVETATDKETSPS 265
           GPPTAYHARLPLAVETATDKETSPS
Sbjct: 241 GPPTAYHARLPLAVETATDKETSPS 265


>gi|239754838 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score =  528 bits (1360), Expect = e-150
 Identities = 264/265 (99%), Positives = 264/265 (99%)

Query: 1   MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL 60
           MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL
Sbjct: 1   MTFLRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRL 60

Query: 61  RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRG 120
           RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGG G
Sbjct: 61  RATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGGG 120

Query: 121 PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP 180
           PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP
Sbjct: 121 PPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLP 180

Query: 181 PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK 240
           PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK
Sbjct: 181 PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK 240

Query: 241 GPPTAYHARLPLAVETATDKETSPS 265
           GPPTAYHARLPLAVETATDKETSPS
Sbjct: 241 GPPTAYHARLPLAVETATDKETSPS 265


>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 294

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 26/124 (20%)

Query: 88  GPFR--APRIFAARPSQPLGQRRGG------GAKGQRGGRGPPNPPAGQ--GSDTGGTKT 137
           G FR  +PR F  RP +P  + R G      G++G+   RG  +PPAG    +   G   
Sbjct: 55  GAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRERRRGSRDPPAGPVARARARGRSA 114

Query: 138 PGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSA-P 196
           PG+   A+ AA  +A+PEA P       P + P+      +LPP R      LGS    P
Sbjct: 115 PGSAQPASGAAGPAAAPEAAP-------PAWDPA------TLPPSRKR--NSLGSSPLHP 159

Query: 197 SRIG 200
            R+G
Sbjct: 160 VRLG 163


>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
           sapiens]
          Length = 315

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 26/124 (20%)

Query: 88  GPFR--APRIFAARPSQPLGQRRGG------GAKGQRGGRGPPNPPAGQ--GSDTGGTKT 137
           G FR  +PR F  RP +P  + R G      G++G+   RG  +PPAG    +   G   
Sbjct: 55  GAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRERRRGSRDPPAGPVARARARGRSA 114

Query: 138 PGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSA-P 196
           PG+   A+ AA  +A+PEA P       P + P+      +LPP R      LGS    P
Sbjct: 115 PGSAQPASGAAGPAAAPEAAP-------PAWDPA------TLPPSRKR--NSLGSSPLHP 159

Query: 197 SRIG 200
            R+G
Sbjct: 160 VRLG 163


>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
           sapiens]
          Length = 315

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 26/124 (20%)

Query: 88  GPFR--APRIFAARPSQPLGQRRGG------GAKGQRGGRGPPNPPAGQ--GSDTGGTKT 137
           G FR  +PR F  RP +P  + R G      G++G+   RG  +PPAG    +   G   
Sbjct: 55  GAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRERRRGSRDPPAGPVARARARGRSA 114

Query: 138 PGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSA-P 196
           PG+   A+ AA  +A+PEA P       P + P+      +LPP R      LGS    P
Sbjct: 115 PGSAQPASGAAGPAAAPEAAP-------PAWDPA------TLPPSRKR--NSLGSSPLHP 159

Query: 197 SRIG 200
            R+G
Sbjct: 160 VRLG 163


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 47/154 (30%), Positives = 54/154 (35%), Gaps = 20/154 (12%)

Query: 100 PSQPLGQRRGGGAKGQRGGRGPPNP-----PAGQGSDTGGTKTPGTTTAAA-AAATGSAS 153
           PS P G     GA G RG  GPP P     P G     G    PG   A   A   G A 
Sbjct: 786 PSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAG 845

Query: 154 PEARP-LVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSS 212
           P   P  +G+  +PG   +  SA    PP     P       A  R+G    S  +    
Sbjct: 846 PAGPPGPIGNVGAPGAKGARGSAG---PPGATGFP------GAAGRVGPPGPSGNAGPPG 896

Query: 213 LKNPIRKEG----FGSLVPGSKEAGAGPPKHKGP 242
              P  KEG     G   P  +    GPP   GP
Sbjct: 897 PPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGP 930



 Score = 38.1 bits (87), Expect = 0.008
 Identities = 46/169 (27%), Positives = 50/169 (29%), Gaps = 35/169 (20%)

Query: 98   ARPSQPLGQRRGGGAKGQRGGRGPPNP-----------PAGQGSDTGGTKTPGTT-TAAA 145
            A P  P+G     GAKG RG  GPP             P G   + G    PG       
Sbjct: 847  AGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGG 906

Query: 146  AAATGSASPEARP-LVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASG 204
                G   P  RP  VG    PG            P      P   G   AP   G    
Sbjct: 907  KGPRGETGPAGRPGEVGPPGPPG------------PAGEKGSPGADGPAGAPGTPGPQGI 954

Query: 205  SRASVVSSLKNPIRKEGFGSLVPGSKEAG----------AGPPKHKGPP 243
            +    V  L     + GF  L   S E G           GPP   GPP
Sbjct: 955  AGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPP 1003



 Score = 37.4 bits (85), Expect = 0.014
 Identities = 46/169 (27%), Positives = 57/169 (33%), Gaps = 35/169 (20%)

Query: 103 PLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPE-ARPLVG 161
           P G+    GA G  G RGPP PP G+  D G    PG          G   P+ AR L G
Sbjct: 204 PPGEPGEPGASGPMGPRGPPGPP-GKNGDDGEAGKPG-----RPGERGPPGPQGARGLPG 257

Query: 162 SCRSPGY----------------GPSLVSADLSLPPRRLA--------IPRQLGSGSAPS 197
           +   PG                 GP+    +   P    A        +P + G   AP 
Sbjct: 258 TAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPG 317

Query: 198 RIGCASGSRASVVS---SLKNPIRKEGFGSLVPGSKEAG-AGPPKHKGP 242
             G      A+  +       P    GF   V    EAG  GP   +GP
Sbjct: 318 PAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGP 366



 Score = 37.4 bits (85), Expect = 0.014
 Identities = 49/179 (27%), Positives = 68/179 (37%), Gaps = 28/179 (15%)

Query: 82  RSKEGLGPFRAPRIFAARPSQ--------PLGQRRGGGAKGQRGGRGPPNP--PAGQGSD 131
           R + G+  F  P+  A  P +        P G     G  G+ G +GPP P  PAG+  +
Sbjct: 574 RGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGE 633

Query: 132 TGGTKTPG-TTTAAAAAATGSA-SPEARPLVGSCRSPGYGPSLVSADLSLP-------PR 182
            G   +PG       A   G A  P  + + G   +P  GPS    +   P       P 
Sbjct: 634 QGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAP--GPSGARGERGFPGERGVQGPP 691

Query: 183 RLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKG 241
             A PR  G+  AP   G    + A      +     +G    +PG + A AG P  KG
Sbjct: 692 GPAGPR--GANGAPGNDGAKGDAGAPGAPGSQGAPGLQG----MPGERGA-AGLPGPKG 743



 Score = 36.2 bits (82), Expect = 0.030
 Identities = 47/170 (27%), Positives = 56/170 (32%), Gaps = 29/170 (17%)

Query: 105  GQRRGGGAKGQRGGRGPPNP--------------PAGQGSDTGGTKTPGTT-TAAAAAAT 149
            G+    GAKG RG  GP  P              PAG+  D G T   G         A 
Sbjct: 1025 GRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGAR 1084

Query: 150  GSASPEA----RPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLG----SGSAPSR--I 199
            G A P+     +   G     G       + L  PP     P + G    SG A  R   
Sbjct: 1085 GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP 1144

Query: 200  GCASGSRASVVSSLKNPIRKEG----FGSLVPGSKEAGAGPPKHKGPPTA 245
            G A       ++ L  PI   G     G   P       GPP   GPP+A
Sbjct: 1145 GSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSA 1194



 Score = 34.7 bits (78), Expect = 0.088
 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 15/90 (16%)

Query: 100  PSQPLGQRRGGGAKGQRGGRGPPNPP--AGQGSDTGGTKTPGTTTAAA----------AA 147
            PS   G++   GA G+RG  GP  PP  AG   ++G    PG   +              
Sbjct: 978  PSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRG 1037

Query: 148  ATGSASPEARPLVGSCRSPG-YGPSLVSAD 176
             TG A P   P  G+  +PG  GP+  S D
Sbjct: 1038 ETGPAGPPGAP--GAPGAPGPVGPAGKSGD 1065



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 36/153 (23%), Positives = 44/153 (28%), Gaps = 12/153 (7%)

Query: 100 PSQPLGQRRGGGAKGQRGGRGPPNPPAGQG----------SDTGGTKTPGTTTAAAAAAT 149
           P  P G+    GA+G+ G  G P PP  +G              G K P     +   A 
Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAG 518

Query: 150 GSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASV 209
              SP      G    PG      S     P  +   P   G    P   G       + 
Sbjct: 519 PKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAG 578

Query: 210 VSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGP 242
           V     P  K   G      +    GPP   GP
Sbjct: 579 VMGFPGP--KGAAGEPGKAGERGVPGPPGAVGP 609



 Score = 33.1 bits (74), Expect = 0.26
 Identities = 43/148 (29%), Positives = 58/148 (39%), Gaps = 27/148 (18%)

Query: 103 PLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGS-ASPEARPLVG 161
           P G R   G  G+RG +GPP P   +G++           A A  A GS  +P  + + G
Sbjct: 672 PSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPG 731

Query: 162 SCRSPGY-GPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKE 220
              + G  GP     D        A P+  G+  +P + G         V  L  PI   
Sbjct: 732 ERGAAGLPGPKGDRGD--------AGPK--GADGSPGKDG---------VRGLTGPIGPP 772

Query: 221 GFGSLVPGSK-EAG----AGPPKHKGPP 243
           G     PG K E+G    AGP   +G P
Sbjct: 773 GPAG-APGDKGESGPSGPAGPTGARGAP 799



 Score = 32.3 bits (72), Expect = 0.44
 Identities = 26/72 (36%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 103 PLGQRRGGGAKGQRGGRGPPNP--PAGQGSDTGGTKTPGTTTAAAAAATGSAS--PEARP 158
           P G R   G +G RG  GPP P   AG   + G    PG   A  A     A   P AR 
Sbjct: 357 PQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARG 416

Query: 159 LVGSCRSPGYGP 170
             G  + PG  P
Sbjct: 417 PSGP-QGPGGPP 427



 Score = 32.0 bits (71), Expect = 0.57
 Identities = 42/166 (25%), Positives = 55/166 (33%), Gaps = 36/166 (21%)

Query: 98  ARPSQPLGQRRGGGAKGQRGGRGP------------PNPPAGQGSD--TGGTKTPGTTTA 143
           A P+ P G+    G  G  G  GP            P P   +G+D  TG    PG T  
Sbjct: 280 AGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGP 339

Query: 144 A-------AAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAP 196
           A       A  A G A P+             GP  V  +   PP         G+  A 
Sbjct: 340 AGPPGFPGAVGAKGEAGPQG-------PRGSEGPQGVRGEPG-PPGPAGAAGPAGNPGAD 391

Query: 197 SRIGCASGSRASVVSSLKNPIRKEGF-GSLVPGSKEAGAGPPKHKG 241
            + G    + A  ++         GF G+  P   +   GPP  KG
Sbjct: 392 GQPGAKGANGAPGIAG------APGFPGARGPSGPQGPGGPPGPKG 431



 Score = 32.0 bits (71), Expect = 0.57
 Identities = 41/144 (28%), Positives = 48/144 (33%), Gaps = 24/144 (16%)

Query: 103 PLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGS 162
           P G +  GG  G +G  G P  P  +G DTG    PG          G A  E +   G+
Sbjct: 417 PSGPQGPGGPPGPKGNSGEPGAPGSKG-DTGAKGEPG--PVGVQGPPGPAGEEGKR--GA 471

Query: 163 CRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGF 222
              PG         L  PP     P   GS   P   G         V+  K P  + G 
Sbjct: 472 RGEPG------PTGLPGPPGERGGP---GSRGFPGADG---------VAGPKGPAGERGS 513

Query: 223 -GSLVPGSKEAGAGPPKHKGPPTA 245
            G   P      AG P   G P A
Sbjct: 514 PGPAGPKGSPGEAGRPGEAGLPGA 537



 Score = 32.0 bits (71), Expect = 0.57
 Identities = 40/146 (27%), Positives = 48/146 (32%), Gaps = 13/146 (8%)

Query: 100 PSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPL 159
           P+ P G     G  G +G  G P  P  QG+  G    PG   AA          +A P 
Sbjct: 693 PAGPRGANGAPGNDGAKGDAGAPGAPGSQGA-PGLQGMPGERGAAGLPGPKGDRGDAGP- 750

Query: 160 VGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRK 219
            G+  SPG            PP     P   G  S PS     +G+R +           
Sbjct: 751 KGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGE-SGPSGPAGPTGARGAPGDR------- 802

Query: 220 EGFGSLVPGSKEAGAGPPKHKGPPTA 245
              G   P      AGPP   G P A
Sbjct: 803 ---GEPGPPGPAGFAGPPGADGQPGA 825



 Score = 29.3 bits (64), Expect = 3.7
 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 100 PSQPLGQRRGGGAKGQRGGRGPPNPPAGQG-SDTGGTKTPGTTTAAAAAATGSAS 153
           P  P G     G  GQ G  GPP PP   G    GG   P  +      +TG  S
Sbjct: 122 PRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGIS 176



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 5/48 (10%)

Query: 97   AARPSQPLGQRRGGGAKGQRGGRGPPNP-----PAGQGSDTGGTKTPG 139
            A+ P+ P G     GA G+ G  G P P     P G+  D G    PG
Sbjct: 1134 ASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPG 1181



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 8/50 (16%)

Query: 100 PSQPLGQRRGGGAKGQRGGRGPPNP--------PAGQGSDTGGTKTPGTT 141
           P    G+    G+KG  G +G P P        PAG+    G    PG T
Sbjct: 429 PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPT 478


>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
          Length = 1612

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 47/166 (28%), Positives = 61/166 (36%), Gaps = 14/166 (8%)

Query: 99   RPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARP 158
            RP  P G R     + + GG G P  P     +    K+PGTT       +   SP+A  
Sbjct: 1164 RPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGRS-QPSPQAG- 1221

Query: 159  LVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIR 218
                    G GP+  S        R  IP + G  SAP     AS  R +  S  K    
Sbjct: 1222 ------LAGPGPAGYST------ARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSET 1269

Query: 219  KEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLPLAVETATDKETSP 264
             +G   L    K   A PP+   PP A   + PL    A   ++ P
Sbjct: 1270 SKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGP 1315


>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
          Length = 1350

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 47/166 (28%), Positives = 61/166 (36%), Gaps = 14/166 (8%)

Query: 99   RPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARP 158
            RP  P G R     + + GG G P  P     +    K+PGTT       +   SP+A  
Sbjct: 1164 RPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGRS-QPSPQAG- 1221

Query: 159  LVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIR 218
                    G GP+  S        R  IP + G  SAP     AS  R +  S  K    
Sbjct: 1222 ------LAGPGPAGYST------ARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSET 1269

Query: 219  KEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLPLAVETATDKETSP 264
             +G   L    K   A PP+   PP A   + PL    A   ++ P
Sbjct: 1270 SKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGP 1315


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 49/181 (27%), Positives = 60/181 (33%), Gaps = 20/181 (11%)

Query: 89   PFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTP----GTTTAA 144
            P  AP   AA P  P G       KG      P  P A   S  GG  TP      TT A
Sbjct: 1191 PKGAPTTPAATPPSPKGGLATPSPKG-----APTTPAATPPSPKGGLATPSPKGAPTTPA 1245

Query: 145  AAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASG 204
            A   +    P   P  G+   P   P  +   L+ PP + A    + +  +P       G
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK-----GG 1300

Query: 205  SRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLPLAVETATDKETSP 264
               S       P       +  P S +   G P  KG PT      P    T T   T+P
Sbjct: 1301 PATSPPKGAPTP------PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354

Query: 265  S 265
            S
Sbjct: 1355 S 1355



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 47/166 (28%), Positives = 61/166 (36%), Gaps = 16/166 (9%)

Query: 89   PFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPP--NPPAGQGSDTGGTKTPGTTTAAAA 146
            P  AP   AA P  P G   G      +G   PP   PP+ +GS        G +T  AA
Sbjct: 982  PKGAPTPPAATPPSPKG---GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAA 1038

Query: 147  AATG-SASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGS 205
                   SP A PL      P   P+  +A L  P    A P   G+ + P+    +   
Sbjct: 1039 TPPSPKGSPAATPL------PKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG 1092

Query: 206  RASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLP 251
              +  S    P+      +  P S + G   P HKG PT   A  P
Sbjct: 1093 GPATPSPKGAPMPP----AATPPSPKGGLATPPHKGAPTTPAATPP 1134



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 50/194 (25%), Positives = 70/194 (36%), Gaps = 29/194 (14%)

Query: 89   PFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKT-PGTTTAAAAA 147
            P  AP   AA P  P G      + G    +G P PPA       GT T P TT ++   
Sbjct: 1306 PKGAPTPPAATPPSPKG------SPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGG 1359

Query: 148  ATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAP----------- 196
             T  +S E      +  S   GP++       P R  AIP   G  ++P           
Sbjct: 1360 PTTPSSKEGPTPPAATPSHKGGPAMTPPS---PKRGPAIPSPKGDPTSPAVIPLSPKKAP 1416

Query: 197  ----SRIGCASGSRASVVSSLKNPIR-KEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLP 251
                +R G A+ S+  +      P+  K+   +  P   + G   P  KG PT      P
Sbjct: 1417 ATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAP---KGGPATPSSKGDPTLPAVTPP 1473

Query: 252  LAVETATDKETSPS 265
               E    K+ + S
Sbjct: 1474 SPKEPPAPKQVATS 1487



 Score = 37.0 bits (84), Expect = 0.018
 Identities = 44/160 (27%), Positives = 54/160 (33%), Gaps = 22/160 (13%)

Query: 89   PFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAA 148
            P  AP   AA P  P G       KG      P  P A   S  GG  TP    A    A
Sbjct: 1145 PKGAPTTPAATPPSPKGGLATPPPKG-----APTTPAATPPSPKGGLATPSPKGAPTTPA 1199

Query: 149  TGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRAS 208
                SP+      +  SP   P+  +A    P   LA P   G+ + P+         A+
Sbjct: 1200 ATPPSPKGGL---ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA---------AT 1247

Query: 209  VVSSLKNPIRKEGFG-----SLVPGSKEAGAGPPKHKGPP 243
              S    P      G     +  P S + G   P HKG P
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAP 1287



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 48/166 (28%), Positives = 58/166 (34%), Gaps = 18/166 (10%)

Query: 89   PFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAA 148
            P  AP   AA P  P    +GG A     G  P  P A   S  GG  TP    A    A
Sbjct: 1099 PKGAPMPPAATPPSP----KGGLATPPHKG-APTTPAATPPSPKGGLATPPPKGAPTTPA 1153

Query: 149  TGSASPEARPLVGSCRSPGYG-PSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRA 207
                SP+     G    P  G P+  +A    P   LA P   G+ + P      + +  
Sbjct: 1154 ATPPSPKG----GLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTP------AATPP 1203

Query: 208  SVVSSLKNPIRKEG--FGSLVPGSKEAGAGPPKHKGPPTAYHARLP 251
            S    L  P  K      +  P S + G   P  KG PT   A  P
Sbjct: 1204 SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1249



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 40/151 (26%), Positives = 54/151 (35%), Gaps = 11/151 (7%)

Query: 111 GAKGQRGGRGPPNPPAGQGSDTGGTKTP----GTTTAAAAAATGSASPEARPLVG-SCRS 165
           G+K        P PP+ +G+ T    TP    G T       T S      P  G +  +
Sbjct: 845 GSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPA 904

Query: 166 PGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGF--- 222
           P   P+L S   S P +  A P   G  ++PS  G  +   A+  S    P         
Sbjct: 905 PKQAPAL-SMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP 963

Query: 223 --GSLVPGSKEAGAGPPKHKGPPTAYHARLP 251
              +  P S + G   P  KG PT   A  P
Sbjct: 964 TPPAATPPSPKGGPATPSPKGAPTPPAATPP 994



 Score = 33.5 bits (75), Expect = 0.20
 Identities = 41/165 (24%), Positives = 55/165 (33%), Gaps = 16/165 (9%)

Query: 89   PFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQG-SDTGGTKTPGTTTAAAAA 147
            P  AP   AA P  P    +GG A      +  P PPA    S  GG  TP    A    
Sbjct: 936  PKGAPTPPAATPPSP----KGGPATPSP--KWAPTPPAATPPSPKGGPATPSPKGAPTPP 989

Query: 148  ATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSA---------PSR 198
            A    SP+  P   S +     P++        P     P+   +  A         P+ 
Sbjct: 990  AATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAA 1049

Query: 199  IGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPP 243
                 G+  +  ++L +P       SL        A PP  KG P
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGP 1094



 Score = 32.0 bits (71), Expect = 0.57
 Identities = 34/131 (25%), Positives = 43/131 (32%), Gaps = 9/131 (6%)

Query: 120  GPPNPPAGQG---SDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCR--SPGYGPSLVS 174
            GP  P   Q    S T  +      T A      S SP+  P   +    SP  GP+  S
Sbjct: 899  GPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS 958

Query: 175  ADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGA 234
               +  P     P   G  + PS  G  +   A+  S    P      G+  P       
Sbjct: 959  PKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTP----PAV 1014

Query: 235  GPPKHKGPPTA 245
             PP  KG P A
Sbjct: 1015 TPPSPKGSPAA 1025


>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
           sapiens]
          Length = 355

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 43/123 (34%), Positives = 49/123 (39%), Gaps = 14/123 (11%)

Query: 67  PRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPA 126
           P SRA R GL  R  R++   GP R  R          G R+ G   G RG        A
Sbjct: 169 PESRAARQGLGGRSARARTRRGPHRTRR--PEPGPHHTGARQAGPLPGTRG----RTRAA 222

Query: 127 GQGSDTGGTK---TPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRR 183
           G GS   G       G+  AAAAA     SP  R  + S RS     SL    L  PP R
Sbjct: 223 GTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS-----SLARPPLRFPPAR 277

Query: 184 LAI 186
            A+
Sbjct: 278 PAL 280


>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
           sapiens]
          Length = 355

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 43/123 (34%), Positives = 49/123 (39%), Gaps = 14/123 (11%)

Query: 67  PRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPA 126
           P SRA R GL  R  R++   GP R  R          G R+ G   G RG        A
Sbjct: 169 PESRAARQGLGGRSARARTRRGPHRTRR--PEPGPHHTGARQAGPLPGTRG----RTRAA 222

Query: 127 GQGSDTGGTK---TPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRR 183
           G GS   G       G+  AAAAA     SP  R  + S RS     SL    L  PP R
Sbjct: 223 GTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS-----SLARPPLRFPPAR 277

Query: 184 LAI 186
            A+
Sbjct: 278 PAL 280


>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
           sapiens]
          Length = 355

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 43/123 (34%), Positives = 49/123 (39%), Gaps = 14/123 (11%)

Query: 67  PRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPA 126
           P SRA R GL  R  R++   GP R  R          G R+ G   G RG        A
Sbjct: 169 PESRAARQGLGGRSARARTRRGPHRTRR--PEPGPHHTGARQAGPLPGTRG----RTRAA 222

Query: 127 GQGSDTGGTK---TPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRR 183
           G GS   G       G+  AAAAA     SP  R  + S RS     SL    L  PP R
Sbjct: 223 GTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS-----SLARPPLRFPPAR 277

Query: 184 LAI 186
            A+
Sbjct: 278 PAL 280


>gi|23510368 homeobox D11 [Homo sapiens]
          Length = 338

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 44/139 (31%), Positives = 52/139 (37%), Gaps = 15/139 (10%)

Query: 108 RGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPG 167
           RGGG  G  GG      P G G   GG   P    AAAAAA  +A+ EA          G
Sbjct: 76  RGGGGGGSAGGGSSGGGPGGGGGGAGG-YAPYYAAAAAAAAAAAAAEEAAMQRELLPPAG 134

Query: 168 YGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSL-- 225
             P ++      P    A P     G      G AS   ++V    +N I  +GF     
Sbjct: 135 RRPDVL---FKAPEPVCAAP-----GPPHGPAGAASNFYSAVG---RNGILPQGFDQFYE 183

Query: 226 -VPGSKEAGAGPPKHKGPP 243
             PG   AG  PP    PP
Sbjct: 184 AAPGPPFAGPQPPPPPAPP 202


>gi|169790811 SHC (Src homology 2 domain containing) transforming
           protein 2 [Homo sapiens]
          Length = 582

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 45/150 (30%), Positives = 56/150 (37%), Gaps = 36/150 (24%)

Query: 117 GGRGPPNPPAGQGSDT-------------------GGTKTPGTTTAAAAAATGSASPEAR 157
           GGR PP PPA    +                    GG    G   A AA A+G A P+  
Sbjct: 6   GGRAPPAPPAPPEPEAPTTFCALLPRMPQWKFAAPGGFLGRGPAAARAAGASGGADPQPE 65

Query: 158 PLVGSCRSPGYGPSLVSADLSLPPRRLAIP-------RQLGSGSAPSRIG---CASGSRA 207
           P       PG  P+L +A L     R A P       R  G+GS  SR G     SG  A
Sbjct: 66  P-----AGPGGVPALAAAVLGACEPRCAAPCPLPALSRCRGAGSRGSRGGRGAAGSGDAA 120

Query: 208 SVVSSLKNP--IRKEGFGSLVPGSKEAGAG 235
           +    ++    I K   G L P ++  G G
Sbjct: 121 AAAEWIRKGSFIHKPAHGWLHPDARVLGPG 150



 Score = 33.1 bits (74), Expect = 0.26
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 93  PRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSA 152
           PR  A  P   L + RG G++G RGGRG     AG G      +     +     A G  
Sbjct: 85  PRCAAPCPLPALSRCRGAGSRGSRGGRG----AAGSGDAAAAAEWIRKGSFIHKPAHGWL 140

Query: 153 SPEARPL 159
            P+AR L
Sbjct: 141 HPDARVL 147


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 52/188 (27%), Positives = 60/188 (31%), Gaps = 40/188 (21%)

Query: 93  PRIFAARPSQPLGQRRGG-----------GAKGQRGGRGPPNPPAGQGS-----DTGGTK 136
           P+  A  P  P G+   G           GA G RGG GPP P  G+G+       G   
Sbjct: 661 PKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAG 720

Query: 137 TPGTTTAAAAAATGSASPEARPLVGSCRSPGY-------GPSLVSADLSLPPRRLAIPRQ 189
           TPG          G  SP  +   G    PG        GP   +  +  PP     P  
Sbjct: 721 TPG-LQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIG-PPGPAGQPGD 778

Query: 190 LGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSL--------------VPGSKEAGAG 235
            G G AP   G A    +        P    GF                  PG K  G G
Sbjct: 779 KGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEG-G 837

Query: 236 PPKHKGPP 243
           PP   GPP
Sbjct: 838 PPGVAGPP 845



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 51/187 (27%), Positives = 65/187 (34%), Gaps = 32/187 (17%)

Query: 87  LGPFRAPRIFAARPSQP--LGQRRGGGAKGQRGGRGPPNPPA--------GQGSDTGGTK 136
           +GP  AP     RP  P   G R   GA+G  G  GPP PP         G   + G   
Sbjct: 299 MGPRGAPGE-RGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAG 357

Query: 137 TPGTTTAAAAAA-------TGSASPEARPLVGSCRSPG----YGPSLVSADLSLPPRRLA 185
           +PG+  A             G+  P   P  G   SPG     GP+ +     L   R  
Sbjct: 358 SPGSNGAPGQRGEPGPQGHAGAQGPPGPP--GINGSPGGKGEMGPAGIPGAPGLMGAR-G 414

Query: 186 IPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSL--VPGS-----KEAGAGPPK 238
            P   G+  AP   G A     +       P  + G   +  VPG+     K+   G P 
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPG 474

Query: 239 HKGPPTA 245
             G P A
Sbjct: 475 ANGLPGA 481



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 40/135 (29%), Positives = 45/135 (33%), Gaps = 25/135 (18%)

Query: 111 GAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGP 170
           G  G+ G +GPP P  G G D G T  PG         TG    E     G    PG   
Sbjct: 609 GKNGETGPQGPPGP-TGPGGDKGDTGPPGPQGLQGLPGTGGPPGEN----GKPGEPG--- 660

Query: 171 SLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSK 230
                D   P      P   G   AP   G    + A        P  + G G   P   
Sbjct: 661 --PKGDAGAP----GAPGGKGDAGAPGERGPPGLAGA--------PGLRGGAGPPGPEGG 706

Query: 231 EAGAGPPKHKGPPTA 245
           +  AGPP   GPP A
Sbjct: 707 KGAAGPP---GPPGA 718



 Score = 35.8 bits (81), Expect = 0.040
 Identities = 41/155 (26%), Positives = 51/155 (32%), Gaps = 24/155 (15%)

Query: 105 GQRRGGGAKGQRGGRGPPNPPAGQGS-----DTGGTKTPGTT-TAAAAAATGSASPEARP 158
           GQR   G +G  G +GPP PP   GS     + G    PG      A    G A     P
Sbjct: 366 GQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAP 425

Query: 159 -LVGSCRSPGY-------GPSLVSADLSLP--PRRLAIPRQLGSGSAPSRIGCASGSRAS 208
            L G    PG        GP     +  +P  P       + GS   P   G    +   
Sbjct: 426 GLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGER 485

Query: 209 VVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPP 243
                + P    G    +PG K    GP   +G P
Sbjct: 486 GAPGFRGPAGPNG----IPGEK----GPAGERGAP 512



 Score = 31.6 bits (70), Expect = 0.75
 Identities = 40/153 (26%), Positives = 49/153 (32%), Gaps = 30/153 (19%)

Query: 101  SQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLV 160
            S P G     G KG  G +GPP  P   G             A    A G A P   P  
Sbjct: 920  SGPKGDAGQPGEKGSPGAQGPPGAPGPLG------------IAGITGARGLAGPPGMP-- 965

Query: 161  GSCRSPG----------YGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVV 210
            G   SPG           G + +S +   PP    +P   G+   P R G  +     + 
Sbjct: 966  GPRGSPGPQGVKGESGKPGANGLSGERG-PPGPQGLPGLAGTAGEPGRDG--NPGSDGLP 1022

Query: 211  SSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPP 243
                +P    G G           G P H GPP
Sbjct: 1023 GRDGSP---GGKGDRGENGSPGAPGAPGHPGPP 1052



 Score = 31.2 bits (69), Expect = 0.98
 Identities = 45/166 (27%), Positives = 55/166 (33%), Gaps = 23/166 (13%)

Query: 100  PSQPLGQRRGGGAKGQRGGRGPPNPP-----AGQGSDTGGTKTPGT--------TTAAAA 146
            P    G+    GA G  G RGPP P      AG   + G    PG+        +     
Sbjct: 973  PQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKG 1032

Query: 147  AATGSASPEARPLVGSCRSPG-YGPSLVSADL--SLPPRRLAIPRQLGSGSAPSRIG--- 200
                + SP A    G    PG  GP+  S D   S P      P   GS  AP   G   
Sbjct: 1033 DRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRG 1092

Query: 201  --CASGSR--ASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGP 242
                +G R  A +      P      GS  P  ++   G P   GP
Sbjct: 1093 DKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGP 1138



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 41/163 (25%), Positives = 50/163 (30%), Gaps = 40/163 (24%)

Query: 103 PLGQRRGGGAKGQRGGRGPPNP--PAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLV 160
           P G     G KG  G RG P P  P G   + G    PG              P  R + 
Sbjct: 493 PAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPG-------------GPGMRGMP 539

Query: 161 GSCRSPGY----GPSLVSADLSLP-----------PRRLAIPRQLGSGSAPSRIGCASGS 205
           GS   PG     GP     +   P           P  +  P   G+  AP + G   G 
Sbjct: 540 GSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGP 599

Query: 206 RASVVSSLKNPIRKEGF-------GSLVPGSKEAGAGPPKHKG 241
                   + P  K G        G   PG  +   GPP  +G
Sbjct: 600 GG---PGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQG 639



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 6/46 (13%)

Query: 105  GQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATG 150
            G+R   G+ G  G  GPP PP   G   GG        AAA A  G
Sbjct: 1170 GERGSEGSPGHPGQPGPPGPPGAPGPCCGG------VGAAAIAGIG 1209



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 42/136 (30%), Positives = 47/136 (34%), Gaps = 33/136 (24%)

Query: 111 GAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGY-G 169
           G  G  GG GP  PP  QG   G   +PG   AA         P AR L G   S G  G
Sbjct: 840 GVAGPPGGSGPAGPPGPQGV-KGERGSPGGPGAA-------GFPGARGLPGPPGSNGNPG 891

Query: 170 PSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGS 229
           P   S      P +   P   G+  AP   G  SG +                    PG 
Sbjct: 892 PPGPSGS----PGKDGPPGPAGNTGAPGSPG-VSGPKGDAGQ---------------PGE 931

Query: 230 KEAGAGPPKHKGPPTA 245
           K    G P  +GPP A
Sbjct: 932 K----GSPGAQGPPGA 943



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 100  PSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPL 159
            P  P G R   G++G  G  G P PP   G+   G    G   AA A   G  +    P 
Sbjct: 1162 PPGPRGNRGERGSEGSPGHPGQPGPPGPPGAP--GPCCGGVGAAAIAGIGGEKAGGFAPY 1219

Query: 160  VG 161
             G
Sbjct: 1220 YG 1221



 Score = 29.3 bits (64), Expect = 3.7
 Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 15/76 (19%)

Query: 97  AARPSQPLGQRRGGGAKGQRGGRGPPNPPA--GQGSDTGGTKTPGTTTAAAAAATGSASP 154
           A  P  P    R    +G +G +G P PP   G+  D G    PG        + GS  P
Sbjct: 86  AVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPG--------SPGSPGP 137

Query: 155 EARPLVGSCRSPGYGP 170
                 G C S   GP
Sbjct: 138 P-----GICESCPTGP 148



 Score = 29.3 bits (64), Expect = 3.7
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 103 PLGQRRGGGAKGQRGGRGPPNPPAGQGSDTG--GTKTPGTTTAAAAAATGSASPEARPLV 160
           P G+    G  G +G  G P  P G+G D G  G + P     A     G+  P      
Sbjct: 649 PPGENGKPGEPGPKGDAGAPGAPGGKG-DAGAPGERGPPGLAGAPGLRGGAGPPGPEGGK 707

Query: 161 GSCRSPG 167
           G+   PG
Sbjct: 708 GAAGPPG 714



 Score = 29.3 bits (64), Expect = 3.7
 Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 105 GQRRGGGAKGQRGGRGPPNPPAGQGS--DTGGTKTPGTTTAAAAAATGSA--SPEARPLV 160
           G   G GA G  G RG P PP   G+    G + +PG       A    A  SP      
Sbjct: 864 GSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPK 923

Query: 161 GSCRSPG 167
           G    PG
Sbjct: 924 GDAGQPG 930



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 103  PLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGS 162
            P+G     G +G+RG  G P  P GQ    G    PG       AA  +        +G 
Sbjct: 1159 PIGPPGPRGNRGERGSEGSPGHP-GQPGPPGPPGAPGPCCGGVGAAAIAG-------IGG 1210

Query: 163  CRSPGYGP 170
             ++ G+ P
Sbjct: 1211 EKAGGFAP 1218



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 97  AARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQG 129
           A  PS P G+    G  G+ G RG P PP  +G
Sbjct: 220 AIGPSGPAGKDGESGRPGRPGERGLPGPPGIKG 252



 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 110 GGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTT-TAAAAAATGSASPEARP 158
           GG  G  G  GPP PP   G+ +G   +PG+          G A P   P
Sbjct: 167 GGLAGYPGPAGPPGPPGPPGT-SGHPGSPGSPGYQGPPGEPGQAGPSGPP 215



 Score = 28.1 bits (61), Expect = 8.3
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 6/65 (9%)

Query: 105  GQRRGGGAKGQRGGRGPPNPPA--GQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGS 162
            G+R   G KG RG  G P  P   G     G   +PG   A      G + P  +   G+
Sbjct: 1098 GERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPG--PAGPRGPVGPSGPPGKD--GT 1153

Query: 163  CRSPG 167
               PG
Sbjct: 1154 SGHPG 1158


>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 52/181 (28%), Positives = 64/181 (35%), Gaps = 16/181 (8%)

Query: 79  RQRRSKEGLGPFRAP---RIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGT 135
           R+ R +EG G  R     R +  RP +   +  G GA   RGG   P    GQG++  G 
Sbjct: 130 RKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAP--RGGAAAPRGWGGQGAERLGV 187

Query: 136 KTPGTTTAAAAAATGSASP----EARPLVGSCRSPGYGPS-------LVSADLSLPPRRL 184
             PG  T AA    G  S      ARP     R P  G         L SA+       L
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247

Query: 185 AIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPPT 244
           A   QL    A  R        A+ VS+   P R    G      +  G       G P+
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPS 307

Query: 245 A 245
           A
Sbjct: 308 A 308



 Score = 35.8 bits (81), Expect = 0.040
 Identities = 72/278 (25%), Positives = 92/278 (33%), Gaps = 49/278 (17%)

Query: 4   LRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRLRAT 63
           LR  + A  L  RP     AG G  +        RP V       G+      + RLR  
Sbjct: 94  LRLASPAGDLPRRP--RPRAGGGRHS-------PRPAV-------GTIFRGGRKGRLREG 137

Query: 64  LLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQ----------------- 106
               R    R G   R +R +  L    APR  AA P    GQ                 
Sbjct: 138 RGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAA 197

Query: 107 -RRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGT---------TTAAAAAATGSASPEA 156
            R GGG     GG   P+PP  +   +G  +   T         T  AA A  G  S   
Sbjct: 198 LRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPH 257

Query: 157 RPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCAS--GSRASVVSSLK 214
             +  S R  G   S+ +A  + P R  A   +   G A  R GCA       S    L+
Sbjct: 258 AAVRNSSRGRGAATSVSAA--ARPTRGGARGHRRADGRA--RGGCAQLRAGTPSAPGGLQ 313

Query: 215 NPIRKEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLPL 252
           +   ++G  +  P    A   P  H    T     LPL
Sbjct: 314 DCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPL 351


>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 52/181 (28%), Positives = 64/181 (35%), Gaps = 16/181 (8%)

Query: 79  RQRRSKEGLGPFRAP---RIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGT 135
           R+ R +EG G  R     R +  RP +   +  G GA   RGG   P    GQG++  G 
Sbjct: 130 RKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAP--RGGAAAPRGWGGQGAERLGV 187

Query: 136 KTPGTTTAAAAAATGSASP----EARPLVGSCRSPGYGPS-------LVSADLSLPPRRL 184
             PG  T AA    G  S      ARP     R P  G         L SA+       L
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247

Query: 185 AIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPPT 244
           A   QL    A  R        A+ VS+   P R    G      +  G       G P+
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPS 307

Query: 245 A 245
           A
Sbjct: 308 A 308



 Score = 35.8 bits (81), Expect = 0.040
 Identities = 72/278 (25%), Positives = 92/278 (33%), Gaps = 49/278 (17%)

Query: 4   LRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRLRAT 63
           LR  + A  L  RP     AG G  +        RP V       G+      + RLR  
Sbjct: 94  LRLASPAGDLPRRP--RPRAGGGRHS-------PRPAV-------GTIFRGGRKGRLREG 137

Query: 64  LLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQ----------------- 106
               R    R G   R +R +  L    APR  AA P    GQ                 
Sbjct: 138 RGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAA 197

Query: 107 -RRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGT---------TTAAAAAATGSASPEA 156
            R GGG     GG   P+PP  +   +G  +   T         T  AA A  G  S   
Sbjct: 198 LRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPH 257

Query: 157 RPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCAS--GSRASVVSSLK 214
             +  S R  G   S+ +A  + P R  A   +   G A  R GCA       S    L+
Sbjct: 258 AAVRNSSRGRGAATSVSAA--ARPTRGGARGHRRADGRA--RGGCAQLRAGTPSAPGGLQ 313

Query: 215 NPIRKEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLPL 252
           +   ++G  +  P    A   P  H    T     LPL
Sbjct: 314 DCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPL 351


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 10/125 (8%)

Query: 149 TGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAI----PRQLGSGSAPSRIGCASG 204
           T    P   PL  +C SP  G +L +A +S PP   A     P    S S+ S   CAS 
Sbjct: 2   TTEGGPPPAPLRRAC-SPVPG-ALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASS 59

Query: 205 SRASVVSSLKNPIRKE----GFGSLVPGSKEAGAGPPKHKGPPTAYHARLPLAVETATDK 260
           S +S  +S  +   K     G G+   G+K+A +G  + + PP +Y A + +A++++  K
Sbjct: 60  SSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSK 119

Query: 261 ETSPS 265
             + S
Sbjct: 120 RLTLS 124



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 221 GFGSL--VPGSKEAGAGPPKHKGPPTAYHARLP 251
           G+G L  +P   +AGAG P H  P   +H  +P
Sbjct: 242 GYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVP 274


>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
           sapiens]
          Length = 955

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 51/174 (29%), Positives = 67/174 (38%), Gaps = 11/174 (6%)

Query: 68  RSRALRSGLS-SRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQR-GGRGPPNPP 125
           RS + RS  + SR   SK      +      +RPSQ  G  +G  AK Q   G    +  
Sbjct: 156 RSSSSRSSSNHSRVESSKRKSAKEKKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDTK 215

Query: 126 AGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSL-PPRRL 184
           A + S      T GT +A+ A+A    SP  R       SP     L S  +    PR  
Sbjct: 216 ASESSKPWPDATYGTGSASRASAVSELSPRER-------SPALKSPLQSVVVRRRSPRPS 268

Query: 185 AIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKE-AGAGPP 237
            +P+     S+ S++G    S A   S         G GSL P  K   G  PP
Sbjct: 269 PVPKPSPPLSSTSQMGSTLPSGAGYQSGTHQGQFDHGSGSLSPSKKSPVGKSPP 322


>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 52/181 (28%), Positives = 64/181 (35%), Gaps = 16/181 (8%)

Query: 79  RQRRSKEGLGPFRAP---RIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQGSDTGGT 135
           R+ R +EG G  R     R +  RP +   +  G GA   RGG   P    GQG++  G 
Sbjct: 130 RKGRLREGRGAVRGSGKRRGWGLRPQRVRSRLAGLGAP--RGGAAAPRGWGGQGAERLGV 187

Query: 136 KTPGTTTAAAAAATGSASP----EARPLVGSCRSPGYGPS-------LVSADLSLPPRRL 184
             PG  T AA    G  S      ARP     R P  G         L SA+       L
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247

Query: 185 AIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHKGPPT 244
           A   QL    A  R        A+ VS+   P R    G      +  G       G P+
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPS 307

Query: 245 A 245
           A
Sbjct: 308 A 308



 Score = 36.2 bits (82), Expect = 0.030
 Identities = 72/278 (25%), Positives = 92/278 (33%), Gaps = 49/278 (17%)

Query: 4   LRSKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRLRAT 63
           LR  + A  L  RP     AG G  +        RP V       G+      + RLR  
Sbjct: 94  LRLASPAGDLPRRP--RPRAGGGRHS-------PRPAV-------GTIFRGGRKGRLREG 137

Query: 64  LLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQ----------------- 106
               R    R G   R +R +  L    APR  AA P    GQ                 
Sbjct: 138 RGAVRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAA 197

Query: 107 -RRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGT---------TTAAAAAATGSASPEA 156
            R GGG     GG   P+PP  +   +G  +   T         T  AA A  G  S   
Sbjct: 198 LRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPH 257

Query: 157 RPLVGSCRSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSRIGCAS--GSRASVVSSLK 214
             +  S R  G   S+ +A  + P R  A   +   G A  R GCA       S    L+
Sbjct: 258 AAVRNSSRGRGAATSVSAA--ARPTRGGARGHRRADGRA--RGGCAQLRAGTPSAPGGLQ 313

Query: 215 NPIRKEGFGSLVPGSKEAGAGPPKHKGPPTAYHARLPL 252
           +   ++G  +  P    A   P  H    T     LPL
Sbjct: 314 DCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPL 351


>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
          Length = 354

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 8/147 (5%)

Query: 106 QRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRS 165
           Q+ G G K +   +         GS++ G  TP   +++A++++ ++S  A P   +   
Sbjct: 97  QQSGSGTKSRPAKKKSSPVRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAG 156

Query: 166 PGYGPSLVSADLSLP-PRRLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPIRKEGFGS 224
            G  P   ++ LS P    +  P  +  GSAP+ +       A   +S           S
Sbjct: 157 LGGNPVAAASSLSTPAASSIWSPASISPGSAPASVSVPEPLAAPSNTSCMQ-------RS 209

Query: 225 LVPGSKEAGAGPPKHKGPPTAYHARLP 251
           +  G+  A A  P   G   +Y    P
Sbjct: 210 VAAGAATAAASYPMSYGQGGSYGQGYP 236



 Score = 31.2 bits (69), Expect = 0.98
 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 18/119 (15%)

Query: 6   SKTSAKTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRLRATLL 65
           S +SA +  A P     AG G   V A S  + P  SS   W  +S++        A++ 
Sbjct: 138 SSSSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSI--WSPASISP---GSAPASVS 192

Query: 66  LPRSRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNP 124
           +P   A  S  S  QR    G           A  S P+   +GG       G+G P P
Sbjct: 193 VPEPLAAPSNTSCMQRSVAAGAA--------TAAASYPMSYGQGGSY-----GQGYPTP 238


>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
           sapiens]
          Length = 870

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 60/238 (25%), Positives = 87/238 (36%), Gaps = 18/238 (7%)

Query: 29  TVWALSPEARPVVSSTGWWEGSSLADQTRNRLRATLLLPRSRALRSGLSSRQRRSKEGLG 88
           T  A + EA P+ +S+     +S  +     L A +      A R    +R R    GL 
Sbjct: 596 TTPASAEEAIPLPASSDSERSASSVEGPGGALYARV------ARREARPARARGEIGGLS 649

Query: 89  PFRAPRIFAARPSQPLGQRRGGGAKGQRG----GRGPPNPPAGQGSDTGGTKTPGTTTAA 144
              +P      P  P  + +     G+      GR P  PP G  +    +K   T +  
Sbjct: 650 LSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDK 709

Query: 145 AAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPP--RRLAIPRQLGSGS---APSRI 199
           +A      SP  R    + R PG      +     PP  R  A PR LG+     +P++ 
Sbjct: 710 SAHTVEHGSPRTRD--PTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKR 767

Query: 200 GCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK-GPPTAYHARLPLAVET 256
             A+   A+ V      + +        G +E  A P K K   P A  AR P A ET
Sbjct: 768 AEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATET 825


>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
           sapiens]
          Length = 865

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 60/238 (25%), Positives = 87/238 (36%), Gaps = 18/238 (7%)

Query: 29  TVWALSPEARPVVSSTGWWEGSSLADQTRNRLRATLLLPRSRALRSGLSSRQRRSKEGLG 88
           T  A + EA P+ +S+     +S  +     L A +      A R    +R R    GL 
Sbjct: 591 TTPASAEEAIPLPASSDSERSASSVEGPGGALYARV------ARREARPARARGEIGGLS 644

Query: 89  PFRAPRIFAARPSQPLGQRRGGGAKGQRG----GRGPPNPPAGQGSDTGGTKTPGTTTAA 144
              +P      P  P  + +     G+      GR P  PP G  +    +K   T +  
Sbjct: 645 LSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDK 704

Query: 145 AAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPP--RRLAIPRQLGSGS---APSRI 199
           +A      SP  R    + R PG      +     PP  R  A PR LG+     +P++ 
Sbjct: 705 SAHTVEHGSPRTRD--PTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKR 762

Query: 200 GCASGSRASVVSSLKNPIRKEGFGSLVPGSKEAGAGPPKHK-GPPTAYHARLPLAVET 256
             A+   A+ V      + +        G +E  A P K K   P A  AR P A ET
Sbjct: 763 AEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATET 820


>gi|90819229 cutaneous T-cell lymphoma-associated antigen 1 isoform
           1 [Homo sapiens]
          Length = 745

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 53/163 (32%), Positives = 67/163 (41%), Gaps = 21/163 (12%)

Query: 108 RGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPG 167
           RGGG    RG RGP NPP  Q +   G  +    T    A +  A P A P     R   
Sbjct: 522 RGGG----RGSRGPGNPPDHQITKERGESSCDRLTDPHRAPS-DAGPLAPPWEQDYRMMF 576

Query: 168 YGPSLVSADLSLPPR----------RLAIPRQLGSGSAPSRIGCASGSRASVVSSLKNPI 217
             P     D +LPP+          RL+ P +L S + PS +    GS  S + S +N  
Sbjct: 577 PPPGQSYPDSALPPQRQDRFYSNCARLSGPAELRSFNMPS-LDKMDGSMPSEMESSRND- 634

Query: 218 RKEGFGSL-VPGSK---EAGAGPPKHKGPPTAYHARLPLAVET 256
            K+  G+L VP S    E  A  P    PP A    L   V+T
Sbjct: 635 TKDNLGNLKVPDSSLPAENEATGPGFVPPPLAPIRGLLFPVDT 677


>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 22/188 (11%)

Query: 11  KTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRLRATLLLPRSR 70
           +T+  + GK+   G   ET+    P+  P+  S                L A  +   + 
Sbjct: 87  RTVTKKEGKLLHLGTAPETL----PDPAPLTDSL---------------LAAPYIFLSAG 127

Query: 71  ALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPA--GQ 128
           A++ G    +    +G GP   PR  A+ P++   Q+R    +  RG RG    P   GQ
Sbjct: 128 AVQKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQ 187

Query: 129 GSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPR 188
           G+   G   P  T A  +  T    P  RPL       G+ P+   +  +  P  L  P 
Sbjct: 188 GAAAVGPTGPRPTGAPPSRRTPPPGPR-RPLRSPHSGSGWTPARPPSPPAGAPEALRPPA 246

Query: 189 QLGSGSAP 196
                 AP
Sbjct: 247 STTRAPAP 254



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 37/118 (31%), Positives = 46/118 (38%), Gaps = 11/118 (9%)

Query: 54  DQTRNRLRATLLLPRSRALRSGLSSRQRRSK--EGLGPFRAPRIFAARPSQ---PLGQRR 108
           D  + R R T    R R  R G      R +    +GP   PR   A PS+   P G RR
Sbjct: 160 DSAQQRRRPTR---RPRGTRGGARRPGVRGQGAAAVGP-TGPRPTGAPPSRRTPPPGPRR 215

Query: 109 GGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSP 166
              +     G  P  PP+         + P +TT A A  T S S  AR L  +  SP
Sbjct: 216 PLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTRAPAPLTLSFS--ARGLAWAGESP 271


>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 22/188 (11%)

Query: 11  KTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRLRATLLLPRSR 70
           +T+  + GK+   G   ET+    P+  P+  S                L A  +   + 
Sbjct: 87  RTVTKKEGKLLHLGTAPETL----PDPAPLTDSL---------------LAAPYIFLSAG 127

Query: 71  ALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPA--GQ 128
           A++ G    +    +G GP   PR  A+ P++   Q+R    +  RG RG    P   GQ
Sbjct: 128 AVQKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQ 187

Query: 129 GSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPR 188
           G+   G   P  T A  +  T    P  RPL       G+ P+   +  +  P  L  P 
Sbjct: 188 GAAAVGPTGPRPTGAPPSRRTPPPGPR-RPLRSPHSGSGWTPARPPSPPAGAPEALRPPA 246

Query: 189 QLGSGSAP 196
                 AP
Sbjct: 247 STTRAPAP 254



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 37/118 (31%), Positives = 46/118 (38%), Gaps = 11/118 (9%)

Query: 54  DQTRNRLRATLLLPRSRALRSGLSSRQRRSK--EGLGPFRAPRIFAARPSQ---PLGQRR 108
           D  + R R T    R R  R G      R +    +GP   PR   A PS+   P G RR
Sbjct: 160 DSAQQRRRPTR---RPRGTRGGARRPGVRGQGAAAVGP-TGPRPTGAPPSRRTPPPGPRR 215

Query: 109 GGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSP 166
              +     G  P  PP+         + P +TT A A  T S S  AR L  +  SP
Sbjct: 216 PLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTRAPAPLTLSFS--ARGLAWAGESP 271


>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 22/188 (11%)

Query: 11  KTLHARPGKMEEAGAGEETVWALSPEARPVVSSTGWWEGSSLADQTRNRLRATLLLPRSR 70
           +T+  + GK+   G   ET+    P+  P+  S                L A  +   + 
Sbjct: 87  RTVTKKEGKLLHLGTAPETL----PDPAPLTDSL---------------LAAPYIFLSAG 127

Query: 71  ALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPA--GQ 128
           A++ G    +    +G GP   PR  A+ P++   Q+R    +  RG RG    P   GQ
Sbjct: 128 AVQKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQ 187

Query: 129 GSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSPGYGPSLVSADLSLPPRRLAIPR 188
           G+   G   P  T A  +  T    P  RPL       G+ P+   +  +  P  L  P 
Sbjct: 188 GAAAVGPTGPRPTGAPPSRRTPPPGPR-RPLRSPHSGSGWTPARPPSPPAGAPEALRPPA 246

Query: 189 QLGSGSAP 196
                 AP
Sbjct: 247 STTRAPAP 254



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 37/118 (31%), Positives = 46/118 (38%), Gaps = 11/118 (9%)

Query: 54  DQTRNRLRATLLLPRSRALRSGLSSRQRRSK--EGLGPFRAPRIFAARPSQ---PLGQRR 108
           D  + R R T    R R  R G      R +    +GP   PR   A PS+   P G RR
Sbjct: 160 DSAQQRRRPTR---RPRGTRGGARRPGVRGQGAAAVGP-TGPRPTGAPPSRRTPPPGPRR 215

Query: 109 GGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRSP 166
              +     G  P  PP+         + P +TT A A  T S S  AR L  +  SP
Sbjct: 216 PLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTRAPAPLTLSFS--ARGLAWAGESP 271


>gi|38045915 pregnancy-associated plasma protein A preproprotein
           [Homo sapiens]
          Length = 1627

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 14/114 (12%)

Query: 69  SRALRSGLSSRQRRSKEGLGPFRAPRIFAARPSQPLGQRRGGGAKGQRGGRGPPNPPAGQ 128
           S AL  GL+ R RR++      R PR  A RP +P         +  RG R  P PP   
Sbjct: 14  SAALGCGLAERPRRAR------RDPR--AGRPPRPAAGPATCATRAARGRRASPPPPPPP 65

Query: 129 GSDTGGTKTP-GTTTAAAAAATGSASPEARPLVGSCRSPGYGPSL-VSADLSLP 180
           G      + P       A  AT   SP +R L  S    G G  L + ADL LP
Sbjct: 66  GGAWEAVRVPRRRQQREARGATEEPSPPSRALYFS----GRGEQLRLRADLELP 115


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 56/204 (27%), Positives = 69/204 (33%), Gaps = 40/204 (19%)

Query: 47  WEGSSLADQTRNRLRATLLLPRSRALRSGLSSRQRRSKEGLGPFRAPRIFA-ARPSQPLG 105
           WEG++ A        A L LP SR L                  R P  F  A P    G
Sbjct: 60  WEGAAWAAGATGVGAALLALPGSRRLG-----------------RVPLTFREASPGPAPG 102

Query: 106 QRRGGGAKGQRGGRGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSCRS 165
             R  G+ G+  G      P+  G      K P     AA     S +      VGSC  
Sbjct: 103 APRARGSCGREPGPRRRRAPSSAG------KRPAAAARAAPPRQRSLARCLPRSVGSCVR 156

Query: 166 PGYGPSL----VSADLSLPPRRLAIPR------QLGSGSAPSRIGCASGSRASVVSSLKN 215
           P  GPSL             RR  +P+      +LGS S P      +GSRA  +S    
Sbjct: 157 PSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPR 216

Query: 216 PIRKE------GFGSLVPGSKEAG 233
             R+       G G  +P S   G
Sbjct: 217 RCRRRAERSPAGHGLPLPRSLSRG 240


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.128    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,305,359
Number of Sequences: 37866
Number of extensions: 804991
Number of successful extensions: 10043
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 756
Number of HSP's that attempted gapping in prelim test: 5631
Number of HSP's gapped (non-prelim): 3919
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.