Guide to the Human Genome
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Search of human proteins with 239749251

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
         (460 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]          957   0.0  
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]          957   0.0  
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]          957   0.0  
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]           822   0.0  
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        64   2e-10
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             62   1e-09
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      60   5e-09
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    60   5e-09
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         60   5e-09
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho...    59   9e-09
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho...    59   9e-09
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho...    59   9e-09
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    59   1e-08
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    58   2e-08
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       58   2e-08
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          58   2e-08
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     58   2e-08
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         58   2e-08
gi|22027541 programmed cell death 7 [Homo sapiens]                     57   4e-08
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    57   5e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni...    57   5e-08
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]      55   1e-07
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     55   2e-07
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     55   2e-07
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    55   2e-07
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    55   2e-07
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       55   2e-07
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       55   2e-07
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    55   2e-07
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                55   2e-07

>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score =  957 bits (2475), Expect = 0.0
 Identities = 460/460 (100%), Positives = 460/460 (100%)

Query: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60
           MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR
Sbjct: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60

Query: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120
           WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN
Sbjct: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120

Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180
           RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK
Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180

Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP 240
           PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP
Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP 240

Query: 241 AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD 300
           AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD
Sbjct: 241 AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD 300

Query: 301 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 360
           RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA
Sbjct: 301 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 360

Query: 361 GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG 420
           GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG
Sbjct: 361 GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG 420

Query: 421 ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460
           ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL
Sbjct: 421 ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460


>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score =  957 bits (2475), Expect = 0.0
 Identities = 460/460 (100%), Positives = 460/460 (100%)

Query: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60
           MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR
Sbjct: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60

Query: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120
           WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN
Sbjct: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120

Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180
           RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK
Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180

Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP 240
           PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP
Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP 240

Query: 241 AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD 300
           AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD
Sbjct: 241 AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD 300

Query: 301 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 360
           RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA
Sbjct: 301 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 360

Query: 361 GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG 420
           GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG
Sbjct: 361 GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG 420

Query: 421 ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460
           ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL
Sbjct: 421 ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460


>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score =  957 bits (2475), Expect = 0.0
 Identities = 460/460 (100%), Positives = 460/460 (100%)

Query: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60
           MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR
Sbjct: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60

Query: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120
           WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN
Sbjct: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120

Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180
           RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK
Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180

Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP 240
           PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP
Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP 240

Query: 241 AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD 300
           AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD
Sbjct: 241 AQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCD 300

Query: 301 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 360
           RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA
Sbjct: 301 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 360

Query: 361 GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG 420
           GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG
Sbjct: 361 GSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSG 420

Query: 421 ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460
           ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL
Sbjct: 421 ISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score =  822 bits (2124), Expect = 0.0
 Identities = 415/480 (86%), Positives = 420/480 (87%), Gaps = 20/480 (4%)

Query: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60
           MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR
Sbjct: 1   MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60

Query: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120
           WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN
Sbjct: 61  WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120

Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180
           RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK
Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180

Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREG----PRGRAESR 236
           PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR       EG    PR R+ + 
Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA 240

Query: 237 GSGPAQ-PAHLPLPGPAHSPAPPAPELREG------RAPGSTAGRRP----RPREPQAAE 285
              PA  P  L     + +   P P    G      RAPG   GR P    R   P  A 
Sbjct: 241 RPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRAR 300

Query: 286 E-----SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 340
           +     SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG
Sbjct: 301 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360

Query: 341 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 400
           PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT
Sbjct: 361 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 420

Query: 401 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460
           RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL
Sbjct: 421 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 480


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 89/323 (27%), Positives = 116/323 (35%), Gaps = 46/323 (14%)

Query: 154 PPRPPPNLQE--GGQRAIFQRPPVYLGNKPTPPRQEGS---FGGRPKSQPPLPQ----ET 204
           PP P P L E  GG        P  L  +P  P  E S       PKS   LPQ    E+
Sbjct: 363 PPAPTPLLAERHGGSPQPLATTP--LSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSES 420

Query: 205 AAPAPQP---------GPTAPPARPPAYESRE---GPRGRAESRGSGPAQPAHLPLP--- 249
           + P+PQP          P +P   P     RE    P  +  S G      +H   P   
Sbjct: 421 SPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRR 480

Query: 250 -GPAHSPAPPAPELREGRAP---GSTAGRRPRPREPQAAEESGCATVGLRRGDC---DRA 302
            G + SPA         R P   G +  R P+ R  ++A+  G +    RRG      R 
Sbjct: 481 MGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540

Query: 303 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPAS-------PPGRRHDEEVGA 355
           G S+   T   G R R  RR R         G   +  PA         P RR       
Sbjct: 541 GWSRSRNTQRRG-RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP 599

Query: 356 AVLRAGSGEGSRRGLQLTPPPRR----VHGALQRFGGGRN-LKSNWMSTTRTPRRSGASG 410
              R+ S   +RRG   +  P R        ++R    R+  + +  S +RTP R G S 
Sbjct: 600 TRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSR 659

Query: 411 PKMVADQTSGISRPPTAGIGTSR 433
            +  A +    SR P    G SR
Sbjct: 660 SRTPARRGRSRSRTPARRSGRSR 682



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 73/276 (26%), Positives = 103/276 (37%), Gaps = 39/276 (14%)

Query: 180 KPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP----PARPPAYESREGPRGRAES 235
           +P+P  +  S G  P +  PL  E    +PQP  T P    P  PP+  S    R     
Sbjct: 349 RPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDR----- 403

Query: 236 RGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP-------REPQAAEESG 288
             S P  P  LP    + S +PP+P+  +     S++   P+P       RE  ++  S 
Sbjct: 404 --SPPKSPEKLPQSSSSES-SPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSK 460

Query: 289 CATVGLRRGD-------CDRAGSSQPPATSGNG-ERCRFCRRR---RRRGGGGEGEGTHA 337
             + G  + D         R G S+ PAT+  G  R R   +R   R R        +  
Sbjct: 461 NRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQ 520

Query: 338 THGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWM 397
             G +  P RR           + S    RRG   +    R H         R+  +   
Sbjct: 521 RWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH--------SRSPATRGR 572

Query: 398 STTRTPRRSGASGPKMVADQTSGISRPPTAGIGTSR 433
           S +RTP R G S  +  A + S  SR PT     SR
Sbjct: 573 SRSRTPARRGRSRSRTPARRRSR-SRTPTRRRSRSR 607



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 80/310 (25%), Positives = 106/310 (34%), Gaps = 61/310 (19%)

Query: 155  PRPPPNLQEGGQ----------RAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQET 204
            PR  P  Q G            RA+ +R      +K   P  EGS       + P    T
Sbjct: 1608 PRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRT 1667

Query: 205  A------APAPQPGPTAPPARPPAYESREGPRG-----RAESRGSGPAQPAHLPLPGPAH 253
            A      +P P+     PP R  +  S E  R      R+ S  S P   +  P P    
Sbjct: 1668 ARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTP-PRHRR 1726

Query: 254  SPAPPAPE-------LREGRAPGS----TAGRR-----PRPREPQAAEESGCATVGLRRG 297
            SP+  +PE        R  R+  S    T  RR     P+PR  Q +             
Sbjct: 1727 SPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTR 1786

Query: 298  DCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAV 357
              DR+GSSQ  +      R R    RRRRGG G    + A    +    RR         
Sbjct: 1787 RRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRR--------- 1837

Query: 358  LRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGP----KM 413
                     RRG   TPP  R   +  R       +S   ++  T RRS +  P    + 
Sbjct: 1838 ---------RRGRSRTPPTSRKR-SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRR 1887

Query: 414  VADQTSGISR 423
               +TS +SR
Sbjct: 1888 SRSRTSPVSR 1897



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 76/357 (21%), Positives = 119/357 (33%), Gaps = 67/357 (18%)

Query: 93   AKGSVPSEGRA-TPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLL 151
            ++   P  GR+ +  L   G  H R  + RG S  +S+  +K + R+   R++   +  +
Sbjct: 692  SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSE--RKNKSRTSQRRSRSNSSPEM 749

Query: 152  ELP------------PRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPP 199
            +              PR     +   +R++    P       TPPR+  S   +PK+   
Sbjct: 750  KKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKA--- 806

Query: 200  LPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPA 259
                                    +SR  PR    S    P Q +  P    +HS + P 
Sbjct: 807  ------------------------KSRTPPRRSRSSSSPPPKQKSKTP-SRQSHSSSSPH 841

Query: 260  PELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGER--C 317
            P+++ G  P     R+     PQA E+S    V  +R  C  + S  P   S    R  C
Sbjct: 842  PKVKSGTPP-----RQGSITSPQANEQS----VTPQRRSCFES-SPDPELKSRTPSRHSC 891

Query: 318  RFCRRRRRRGGGGEGEGTHATHGP-------ASPPGRRHDEEVGAAVLRAGSGEGSRRGL 370
                  R +      +    +  P        SP  R H      +  R  S    RR  
Sbjct: 892  SGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSR 951

Query: 371  QLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASG-----PKMVADQTSGIS 422
             ++P        L R+    +   +      TP R   SG     PK+ A    G S
Sbjct: 952  SVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPS 1008



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 41/177 (23%), Positives = 61/177 (34%), Gaps = 15/177 (8%)

Query: 91   PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALL 150
            P  K +V  EGR  PP P P     R   +   S+ +S     +   S    +    +  
Sbjct: 2584 PAPKEAV-REGR--PPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640

Query: 151  LELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRP-------KSQPPLPQE 203
                    P+  + G +A+   P      KP P  +      +P       +S    P E
Sbjct: 2641 SSSSSSSSPSPAKPGPQAL---PKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVE 2697

Query: 204  TAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAP 260
               P+PQP P    +      SR G RG  +SR     +    P P P    +  +P
Sbjct: 2698 RRRPSPQPSPRDQQSSSSERGSRRGQRG--DSRSPSHKRRRETPSPRPMRHRSSRSP 2752



 Score = 33.5 bits (75), Expect = 0.42
 Identities = 66/286 (23%), Positives = 100/286 (34%), Gaps = 43/286 (15%)

Query: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRG 237
           G  P+P       G  P S+P     T  P+     T  P+ P  YE ++  + + E   
Sbjct: 293 GRSPSPASGRRGEGDAPFSEPGTTS-TQRPSSPETATKQPSSP--YEDKD--KDKKEKSA 347

Query: 238 SGPAQPAHLPLPGPAHSPAPPAPEL--REGRAP------------------GSTAGRRPR 277
           + P+        GP   P  P P L  R G +P                   S    R  
Sbjct: 348 TRPSPSPERSSTGP--EPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSP 405

Query: 278 PREPQAAEESGCA---------TVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGG 328
           P+ P+   +S  +         T   R            PA   + E       + R  G
Sbjct: 406 PKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHG 465

Query: 329 GGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPR-RVHGALQRFG 387
             + + +H +H P+   GR       A   R+ S   ++RG   +  P+ R   + QR+G
Sbjct: 466 RAKRDKSH-SHTPSRRMGRSRSPAT-AKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWG 523

Query: 388 GGRNLKSNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAGIGTSR 433
             R+ +    S  R+P+R G S  +    Q  G SR    G   SR
Sbjct: 524 RSRSPQRRGRS--RSPQRPGWSRSRNT--QRRGRSRSARRGRSHSR 565



 Score = 33.1 bits (74), Expect = 0.54
 Identities = 45/224 (20%), Positives = 74/224 (33%), Gaps = 19/224 (8%)

Query: 197  QPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSG-PAQPAHLPLPGPAHSP 255
            QP   + +++ +     ++  +   +  S       ++S GS  P QP       P+ +P
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTP 2584

Query: 256  APPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGE 315
            AP    +REGR P  T  +R R     ++  S  ++          + SS   ++S +  
Sbjct: 2585 APKEA-VREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2643

Query: 316  RCRFCRRRRRRGGGGEGEGTHATHGPAS----PPGRRHDEEVGAAVLRAGSGEG------ 365
                     +        G  A   PAS    PPG R        +              
Sbjct: 2644 SSSSSPSPAK-------PGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPV 2696

Query: 366  SRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGAS 409
             RR     P PR    +    G  R  + +  S +   RR   S
Sbjct: 2697 ERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPS 2740



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 37/177 (20%), Positives = 53/177 (29%), Gaps = 23/177 (12%)

Query: 181  PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSG- 239
            PTP  +E    GRP    P  ++  + +     ++  +   +  S       + S  S  
Sbjct: 2582 PTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641

Query: 240  ---------PAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCA 290
                     PA+P    LP PA    PP         PG    R PR       +    +
Sbjct: 2642 SSSSSSSPSPAKPGPQALPKPASPKKPP---------PGERRSRSPRKPIDSLRDSRSLS 2692

Query: 291  TVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR 347
               + R    R  S QP              RR +RG             P+  P R
Sbjct: 2693 YSPVER----RRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMR 2745



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 64/262 (24%), Positives = 91/262 (34%), Gaps = 32/262 (12%)

Query: 156  RPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTA 215
            RPPP++   G  A   + P  +           +   R      +P  +AA A       
Sbjct: 2194 RPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASR------IPAASAA-AMNLASAR 2246

Query: 216  PPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRR 275
             PA P A          A+SR   PA  A + L  P  + AP A  L + R P + A   
Sbjct: 2247 TPAIPTAVNL-------ADSRT--PAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNL 2297

Query: 276  PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGT 335
               R P A      A + L        GS  PP  +      R  +        G     
Sbjct: 2298 AGARTPAA-----LAALSL-------TGSGTPPTAANYPSSSRTPQAPASANLVGP-RSA 2344

Query: 336  HATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSN 395
            HAT  P +  G R    +  A L +     +  G  LT  PR    A +R  G  +    
Sbjct: 2345 HAT-APVNIAGSRTAAALAPASLTSARMAPALSGANLT-SPRVPLSAYERVSGRTSPPLL 2402

Query: 396  WMSTTRTPRRSGASGPKMVADQ 417
              + +RTP  S  S  +M +++
Sbjct: 2403 DRARSRTP-PSAPSQSRMTSER 2423


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 48/135 (35%), Positives = 52/135 (38%), Gaps = 29/135 (21%)

Query: 153 LPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQP- 211
           LPP PPP+   GG +    RPP+  GNK           GR    PP+P   A P P P 
Sbjct: 313 LPPPPPPS--RGGNQ--LPRPPIVGGNK-----------GRSGPLPPVPLGIAPPPPTPR 357

Query: 212 -----GPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLP--------GPAHSPAPP 258
                G   PP  PP    R GP         GP  P   P P        GPA  P PP
Sbjct: 358 GPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPP 417

Query: 259 APELREGRAPGSTAG 273
           A     G APG   G
Sbjct: 418 ALVPAGGLAPGGGRG 432


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 92/343 (26%), Positives = 116/343 (33%), Gaps = 59/343 (17%)

Query: 69  NPKRSGDMGKYHAHGH---LRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSA 125
           NP   G  G   A+G      AP FP A+G    +G   PP P      P    ++G + 
Sbjct: 387 NPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTG 446

Query: 126 GTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPR 185
              + G                   + +   P P  +EG + A  +  P  L   P PP 
Sbjct: 447 AKGEPGP------------------VGVQGPPGPAGEEGKRGARGEPGPTGL---PGPPG 485

Query: 186 QEGSFGGR--PKSQPPL-PQETAAPAPQPGPTAPPARP-----PAYESREGPRGRAESRG 237
           + G  G R  P +     P+  A     PGP  P   P     P      G +G   S G
Sbjct: 486 ERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPG 545

Query: 238 SGPAQPAHLPLPGPAHS---PAPPAPELREGRA-PGSTAGRRPRPREPQAAEESGC---- 289
           S P        PGPA     P PP P    G+A      G +    EP  A E G     
Sbjct: 546 S-PGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP 604

Query: 290 ATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR-- 347
             VG   G    AG+  PP  +G           R   G     G     GPA PPG   
Sbjct: 605 GAVG-PAGKDGEAGAQGPPGPAGPA-------GERGEQGPAGSPGFQGLPGPAGPPGEAG 656

Query: 348 RHDEEVGAAVLRAGSGEGSR--------RGLQLTPPPRRVHGA 382
           +  E+     L A    G+R        RG+Q  P P    GA
Sbjct: 657 KPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGA 699



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 86/338 (25%), Positives = 106/338 (31%), Gaps = 78/338 (23%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPH-----PGDHHPRHRKN-RGP 123
            P   G++G   A G   +   P A G   + GR  PP P      PG   P  ++  +GP
Sbjct: 850  PGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 909

Query: 124  SAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP 183
               T   G+  +                  PP PP    E G        P      P P
Sbjct: 910  RGETGPAGRPGEVG----------------PPGPPGPAGEKGSPGA--DGPAGAPGTPGP 951

Query: 184  PRQEGSFG--GRPKSQ-----PPLPQETAAPAPQ-----------PGPTAPP--ARPPAY 223
                G  G  G P  +     P LP  +  P  Q           PGP  PP  A PP  
Sbjct: 952  QGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 1011

Query: 224  ESREGPRGRAESRG-------------SGPAQPAHLP----LPGPA-----------HSP 255
              REG  G   S G             +GPA P   P     PGP              P
Sbjct: 1012 SGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGP 1071

Query: 256  APPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGE 315
            A PA  +    A G    + PR  + +  E+      G  RG     G   PP + G   
Sbjct: 1072 AGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKG-HRGFSGLQGPPGPPGSPGEQG 1130

Query: 316  RCRFCRRRRRRGGGGEG-----EGTHATHGPASPPGRR 348
                      RG  G       +G +   GP  PPG R
Sbjct: 1131 PSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPR 1168



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 62/244 (25%), Positives = 81/244 (33%), Gaps = 28/244 (11%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP---APQ 210
           P  P P    G   A     P        PP   G+ G + ++ P  P+ +  P     +
Sbjct: 313 PGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGE 372

Query: 211 PGPTAP-----PARPPAYESREGPRGRAESRG--SGPAQPAHLPLPGPAHSPAPPAPELR 263
           PGP  P     PA  P  + + G +G   + G    P  P      GP     PP P+  
Sbjct: 373 PGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGN 432

Query: 264 EGR--APGS--TAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRF 319
            G   APGS    G +  P         G A    +RG     G +  P   G       
Sbjct: 433 SGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPG------- 485

Query: 320 CRRRRRRGGGGEG-EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRR 378
                R G G  G  G     GP  P G R     G A  +   GE  R G    P  + 
Sbjct: 486 ----ERGGPGSRGFPGADGVAGPKGPAGERGSP--GPAGPKGSPGEAGRPGEAGLPGAKG 539

Query: 379 VHGA 382
           + G+
Sbjct: 540 LTGS 543



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 61/215 (28%), Positives = 75/215 (34%), Gaps = 45/215 (20%)

Query: 183 PPRQEGSFGGRPKSQP--PLPQETAAPAP----QPGPTAPP--ARPPAYESREGPRGRAE 234
           PP   G+ G + +S P  P     A  AP    +PGP  P   A PP  + + G +G   
Sbjct: 771 PPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPG 830

Query: 235 SRGS-------GPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEES 287
             G+       GPA PA            PP P    G APG+  G R     P A    
Sbjct: 831 DAGAKGDAGPPGPAGPA-----------GPPGPIGNVG-APGA-KGARGSAGPPGATGFP 877

Query: 288 GCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGE-GTHATHGPASPPG 346
           G A      G    AG   PP  +G           +  G G  GE G     G   PPG
Sbjct: 878 GAAGRVGPPGPSGNAGPPGPPGPAG-----------KEGGKGPRGETGPAGRPGEVGPPG 926

Query: 347 RRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG 381
                  G A  +   G     G   TP P+ + G
Sbjct: 927 -----PPGPAGEKGSPGADGPAGAPGTPGPQGIAG 956



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 51/193 (26%), Positives = 64/193 (33%), Gaps = 44/193 (22%)

Query: 196 SQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSG--PAQPAHLPLPGPAH 253
           S+ P  QET       G T P           GPRG A   G    P QP    LPGP  
Sbjct: 99  SESPTDQETTGVEGPKGDTGP----------RGPRGPAGPPGRDGIPGQPG---LPGPPG 145

Query: 254 SPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGN 313
            P PP P       PG      P+       + +G  +V    G     G   PP   G 
Sbjct: 146 PPGPPGP-------PGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPG- 197

Query: 314 GERCRFCRRRRRRGGGGE-----GEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRR 368
                    +  +G  GE       G     GP  PPG+  D+          +G+  R 
Sbjct: 198 --------PQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDD--------GEAGKPGRP 241

Query: 369 GLQLTPPPRRVHG 381
           G +  P P+   G
Sbjct: 242 GERGPPGPQGARG 254



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 56/208 (26%), Positives = 71/208 (34%), Gaps = 33/208 (15%)

Query: 181 PTPPRQEGSFGGR-PKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSG 239
           P PP   G  G + P  +P  P  +    P+ GP  PP +    +   G  GR   RG  
Sbjct: 190 PGPPGAPGPQGFQGPPGEPGEPGASGPMGPR-GPPGPPGK-NGDDGEAGKPGRPGERGPP 247

Query: 240 PAQPAHLPLPGPAHSPAPPAPE----LREGRAPGSTAGRRPRPREPQAAEESGCATVGLR 295
             Q A   LPG A  P          L   +     AG +  P  P   E      +G R
Sbjct: 248 GPQGAR-GLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSP--GENGAPGQMGPR 304

Query: 296 --RGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEV 353
              G+  R G+  P    GN              G     G     GPA PPG      V
Sbjct: 305 GLPGERGRPGAPGPAGARGN-------------DGATGAAGPPGPTGPAGPPG--FPGAV 349

Query: 354 GAAVLRAGSGEGSRRGLQLTPPPRRVHG 381
           GA       GE   +G + +  P+ V G
Sbjct: 350 GA------KGEAGPQGPRGSEGPQGVRG 371



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 56/199 (28%), Positives = 66/199 (33%), Gaps = 43/199 (21%)

Query: 69   NPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRA-----TPPLPHPGDHHPRHRKNRGP 123
            +P   GD G+    G   AP  P A G V   G++     T P    G   P     RGP
Sbjct: 1029 SPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGA--RGP 1086

Query: 124  SAGTSQLGKKTQCRSLFLR-TKGLCALL-LELPPRPPPNLQEGGQRAIFQRPPVYLGNKP 181
            +      G K +      R  KG      L+ PP PP +  E G             + P
Sbjct: 1087 AGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSG---------ASGP 1137

Query: 182  TPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPA 241
              PR      G P                PGP  PP          GPRGR     +GP 
Sbjct: 1138 AGPRGPPGSAGAPGKD--------GLNGLPGPIGPP----------GPRGRTGD--AGPV 1177

Query: 242  QPAHLPLPGPAHSPAPPAP 260
             P     PGP   P PP P
Sbjct: 1178 GP-----PGPPGPPGPPGP 1191



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 69/263 (26%), Positives = 81/263 (30%), Gaps = 43/263 (16%)

Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP-PARPPAYESREGPRGRAESRG-S 238
           P PP + G  G   K  P  P E   P PQ     P  A  P  +   G  G   ++G +
Sbjct: 223 PGPPGKNGDDGEAGK--PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDA 280

Query: 239 GPAQPAHLP----------------LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQ 282
           GPA P   P                LPG    P  P P    G    + A   P P  P 
Sbjct: 281 GPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGP- 339

Query: 283 AAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPA 342
           A        VG +      AG   P  + G          +  RG  G   G     GPA
Sbjct: 340 AGPPGFPGAVGAK----GEAGPQGPRGSEG---------PQGVRGEPGP-PGPAGAAGPA 385

Query: 343 SPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRT 402
             PG   D + GA       G     G     P  R     Q  GG    K N       
Sbjct: 386 GNPGA--DGQPGAKGANGAPGIAGAPGF----PGARGPSGPQGPGGPPGPKGN-SGEPGA 438

Query: 403 PRRSGASGPKMVADQTSGISRPP 425
           P   G +G K       G+  PP
Sbjct: 439 PGSKGDTGAKGEPGPV-GVQGPP 460


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 50/146 (34%), Positives = 57/146 (39%), Gaps = 29/146 (19%)

Query: 154 PPRPPPNLQEGGQRAIFQRP---PVYLGNKPTPPRQEGSFGGRPKSQPPL-PQETAAPAP 209
           PP PPP  Q      +   P   P   G++P PP     F G+P  QPPL P     P P
Sbjct: 249 PPGPPPPGQ------VLPPPLAGPPNRGDRPPPPVL---FPGQPFGQPPLGPLPPGPPPP 299

Query: 210 QPGPTAPPARPPAYESREGPRGRAESRGSGP-------AQPAHLPLPGPAHSPAPPAPEL 262
            PG   PP  PP  +    P G    R  GP       A P H  LPGP     PPAP +
Sbjct: 300 VPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPH--LPGPPPGAPPPAPHV 357

Query: 263 REGRAPGST-------AGRRPRPREP 281
                P  T         R P P +P
Sbjct: 358 NPAFFPPPTNSGMPTSDSRGPPPTDP 383



 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 61/197 (30%), Positives = 68/197 (34%), Gaps = 24/197 (12%)

Query: 88  PVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRG-----PSAGTSQLGKKTQCRSLFLR 142
           P FP   G  P      PPL  PG   P      G     P AG    G +     LF  
Sbjct: 228 PPFPA--GQTPPR----PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG 281

Query: 143 TKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQ--PPL 200
                  L  LPP PPP +   G       PP     +  PP   G F  RP     PPL
Sbjct: 282 QPFGQPPLGPLPPGPPPPVPGYGP------PPGPPPPQQGPPPPPGPFPPRPPGPLGPPL 335

Query: 201 PQETAAPAPQPGPTAPPARP---PAYESREGPRGR--AESRGSGPAQPAHLPLPGPAHSP 255
                   P P P APP  P   PA+       G   ++SRG  P  P   P P      
Sbjct: 336 TLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDY 395

Query: 256 APPAPELREGRAPGSTA 272
            PP  E+   R P S A
Sbjct: 396 GPPGREMDTARTPLSEA 412



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 33/113 (29%), Positives = 37/113 (32%), Gaps = 25/113 (22%)

Query: 191 GGRPKSQPPLPQETAAPAPQ---PGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHL- 246
           GG P   PP P     P P    PGP  PP  PP  +    P     +RG  P  P    
Sbjct: 224 GGPP---PPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFP 280

Query: 247 ------------------PLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREP 281
                             P+PG    P PP P+      PG    R P P  P
Sbjct: 281 GQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGP 333


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 64/242 (26%), Positives = 85/242 (35%), Gaps = 53/242 (21%)

Query: 153 LPPRPPPNLQEG-----------GQRAIFQRPPVYLGNK-PTPPRQEGSFGGRPKSQPPL 200
           LP  P P   EG           G+ A+     V LG   P PP  +  +GG    +  L
Sbjct: 432 LPQPPAPRAPEGDDFLSLHAESDGEGAL----QVDLGEPAPAPPAADSRWGGLDLRRKIL 487

Query: 201 PQE-------TAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAH 253
            Q        + +PAP P P A    P   +SR   +   E++ +  +     P P    
Sbjct: 488 TQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPA 547

Query: 254 SPAPPAPELREGRAPG----STAGRRPRPREPQAAEESGCATVGLRRGDCDRAGS----- 304
           SP          R PG    S+A RR R R    +      +   RRG   R+ S     
Sbjct: 548 SPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRR 607

Query: 305 ------SQPPATSGNGERCRFCRRRRRRGGGG---------------EGEGTHATHGPAS 343
                 S PPATS +    R   R + R GGG                G+G+     PA 
Sbjct: 608 RRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAPAP 667

Query: 344 PP 345
           PP
Sbjct: 668 PP 669



 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 78/286 (27%), Positives = 97/286 (33%), Gaps = 57/286 (19%)

Query: 191 GGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPG 250
           GGR  +  P P  +A P  QP P  P  R P  E  +     AES G G  Q   + L  
Sbjct: 413 GGR--AARPTPAASATPTAQPLPQPPAPRAP--EGDDFLSLHAESDGEGALQ---VDLGE 465

Query: 251 PAHSPAPPAPELREG-----RAPGSTAGRRPRPREPQAAEESGCATVG------------ 293
           PA  PAPPA + R G     R   +    R R R P  A     A               
Sbjct: 466 PA--PAPPAADSRWGGLDLRRKILTQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRER 523

Query: 294 LRRGDCDRAGSSQ------PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR 347
            R G+   A SS       PPA +   +  +   R R+ G          +   +     
Sbjct: 524 KRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRST 583

Query: 348 RH-----DEEVGAAVLRAGSGEGSRRGLQLTPPP---------RRVHGALQRFGGGRNLK 393
           R      D   G +       +  RR    +PPP         R  H    R GGG   K
Sbjct: 584 RRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKK 643

Query: 394 SNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDR 439
               S +R  +RSG    K  A        PP +G   S  C GDR
Sbjct: 644 KK-RSRSRGEKRSGDGSEKAPA------PAPPPSG---STSC-GDR 678



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 179 NKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTA------PPARPPAYESREGPRGR 232
           ++PT  R      G     PP    +A+ +P P P++      PP  PPA  +   PR  
Sbjct: 167 SRPTCARHLTLGTGDGGPAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFD 226

Query: 233 AESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEE 286
                  P   A+ P P P     P  P    G  P S+AG  P P E +  EE
Sbjct: 227 IYD-PFHPTDEAYSPPPAPEQKYDPFEP---TGSNPSSSAG-TPSPEEEEEEEE 275



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 207 PAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPL----PGPAHSPAPPAPEL 262
           P P P P+  P R  A+  R G     +S  S P    HL L     GPA  PAP +   
Sbjct: 139 PIPLPVPSLLP-RLRAW--RTGKTVSPQSNSSRPTCARHLTLGTGDGGPAPPPAPSSASS 195

Query: 263 REGRAPGSTAGRRPRPREPQA 283
               +P S++   P P  P A
Sbjct: 196 SPSPSPSSSSPSPPPPPPPPA 216



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 173 PPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ---PGPTAPP----ARPPAYES 225
           PP       +P     S    P   PP P   A PAP+     P  P     + PPA E 
Sbjct: 187 PPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPPPAPEQ 246

Query: 226 REGPRGRAESRGSGPAQPAHLPLP 249
           +  P    E  GS P+  A  P P
Sbjct: 247 KYDP---FEPTGSNPSSSAGTPSP 267


>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
            sapiens]
          Length = 1818

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 91/352 (25%), Positives = 111/352 (31%), Gaps = 65/352 (18%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129
            P   G  G+    G    P FP A G   + G A  P P         R +RG    T +
Sbjct: 852  PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK 911

Query: 130  LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP-------PVYLGNKPT 182
             G K                  + PP PP      G +     P       P      P 
Sbjct: 912  PGPKGTSGG-------------DGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPG 958

Query: 183  PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP--------PARPPAYESREGPRGRAE 234
             P Q G  G + K+ PP P     P    G T P        P  PP  +   G  G+  
Sbjct: 959  HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 1018

Query: 235  SRG----------SGPAQ----PAHLPLPGPAHSP---------APPAPELREG-RAPGS 270
            ++G           GPA     P    LPG   +P          PP P    G R    
Sbjct: 1019 AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAG 1078

Query: 271  TAG-----RRPRPREPQA-AEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRR 324
            TAG      RP P+ P   A E G       +G   R G   P    G            
Sbjct: 1079 TAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDG 1138

Query: 325  RRGGGGE-----GEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 371
             +G  GE      +G    +GP  PPG +    VGA  +  G GE   RG Q
Sbjct: 1139 DKGEIGEPGQKGSKGDKGENGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQ 1188



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 71/277 (25%), Positives = 91/277 (32%), Gaps = 45/277 (16%)

Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207
           P  + QE   +AI Q+          P+ L  +P P    GS G + +S  P PQ     
Sbjct: 519 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 578

Query: 208 APQPGPTAPPAR--PPAYESREGPRGRAESRGSG--------PAQPAHLPLPGPAHSPAP 257
              PGPT  P +   P  +   G  G   ++G          P    H    GP   P P
Sbjct: 579 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 638

Query: 258 PAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERC 317
           P  +   G       G R  P E       G        G    AG   PP   GN    
Sbjct: 639 PGDDGMRGE--DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 696

Query: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE-EVGAAVLRAGSGEGSRRGLQ----- 371
                  ++G  G  +G     GP  PPG +  + + G A L    G     G +     
Sbjct: 697 GEPGPPGQQGNPGP-QGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGE 755

Query: 372 ---LTPP----------PRRVHGALQRFGGGRNLKSN 395
              L PP          PR V GA     G R LK +
Sbjct: 756 KGALGPPGPQGPIGYPGPRGVKGA----DGVRGLKGS 788



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 63/235 (26%), Positives = 82/235 (34%), Gaps = 47/235 (20%)

Query: 174  PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPAR--------- 219
            P+ L   P PP ++G  G     G P   PP P+    P    GP  PP           
Sbjct: 1208 PIGLQGLPGPPGEKGENGDVGPMGPP--GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGE 1265

Query: 220  -----------PPAYESREGPRG-RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGR- 266
                       PP      GP+G R E   +GP   A     GP  +  PP  +  +G  
Sbjct: 1266 KGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAA-----GPPGAKGPPGDDGPKGNP 1320

Query: 267  APGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRR 325
             P    G    P EP  A + G   VG  +G+    G   PP  SG  G      +R   
Sbjct: 1321 GPVGFPGDPGPPGEPGPAGQDG---VGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPP 1377

Query: 326  RGGGGEG----EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 376
               G EG    +G     G   PPG+      G    +  +G+    GL+  P P
Sbjct: 1378 GAAGAEGRQGEKGAKGEAGAEGPPGK-----TGPVGPQGPAGKPGPEGLRGIPGP 1427



 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 183  PPRQEGSFGGR----PKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS 238
            PP ++G  G R     +  P    +   P P  GP  PP  PP     +GP+G   S  +
Sbjct: 1475 PPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPA-GPLGPPG-PPGLPGPQGPKGNKGS--T 1530

Query: 239  GPA-QPAHLPLPGPAHSPAPP 258
            GPA Q     LPGP  SP PP
Sbjct: 1531 GPAGQKGDSGLPGPPGSPGPP 1551



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 60/237 (25%), Positives = 75/237 (31%), Gaps = 43/237 (18%)

Query: 165 GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--PA 222
           G+ A+ + P + +   P P    G  G      PP  Q    P   PG   PP RP  P 
Sbjct: 441 GEPAVVE-PGMLVEGPPGPAGPAGIMG------PPGLQGPTGPPGDPGDRGPPGRPGLPG 493

Query: 223 YESREGPRG--------------------RAESRGSGPAQPAHLPL---PGPAHSPAPPA 259
            +   GP G                      E++     Q A + L   PGP      P 
Sbjct: 494 ADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPG 553

Query: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCAT--VGLRRGDCDRAGSSQPPATSGNGERC 317
           P    G +        P P+ P+  +     T   G R       G   P      G+R 
Sbjct: 554 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR- 612

Query: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPG----RRHDEEVGAAVLRAGSGEGSRRGL 370
            F       G  G   G     GP  PPG    R  D E+G    R   GE   RGL
Sbjct: 613 GFDGLPGLPGDKGH-RGERGPQGPPGPPGDDGMRGEDGEIGP---RGLPGEAGPRGL 665



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 60/254 (23%), Positives = 78/254 (30%), Gaps = 34/254 (13%)

Query: 188  GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--------PAYESREGPRGRAESRGSG 239
            G  G R +  P  P+  A P   PGP+              P Y  R+GP+G     G  
Sbjct: 814  GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 873

Query: 240  PAQPAH-----LPLPGPAHSPAPPAPE-LREGRAP-------GSTAGRRPRPREPQAAEE 286
             A            PGP     P  P   R  R P       G++ G  P     +   +
Sbjct: 874  GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ 933

Query: 287  SGCATVGL--RRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASP 344
                 VG    +G     G    P   G      F  +    G GG   G     G   P
Sbjct: 934  GPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGV-VGPQGPTGETGP 992

Query: 345  PGRR-HDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG-----ALQRFGGGRNLKSNWMS 398
             G R H    G    +   G   + G +  P P+ + G      L+ F G R L      
Sbjct: 993  IGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLP----G 1048

Query: 399  TTRTPRRSGASGPK 412
                P   G  GP+
Sbjct: 1049 AQGAPGLKGGEGPQ 1062



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 53/214 (24%), Positives = 69/214 (32%), Gaps = 41/214 (19%)

Query: 94   KGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLEL 153
            KG     G+  PP P      P     RGP       G++ +  +     KG        
Sbjct: 1347 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA-----KGEAGA---- 1397

Query: 154  PPRPPPNLQEGGQRAIFQRP-PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212
               PP      G +    +P P  L   P P  ++G  G   +  PP P     P   PG
Sbjct: 1398 -EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPM---GPPGLPG 1453

Query: 213  PTAPPAR--------------PPAYESREGPRGRAESRGS----------GPAQPAHLPL 248
                P                PP  +  +G RG   ++GS          GPA P  L  
Sbjct: 1454 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGP--LGP 1511

Query: 249  PGPAHSPAPPAPELREG-RAPGSTAGRRPRPREP 281
            PGP   P P  P+  +G   P    G    P  P
Sbjct: 1512 PGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPP 1545


>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
            sapiens]
          Length = 1767

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 91/352 (25%), Positives = 111/352 (31%), Gaps = 65/352 (18%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129
            P   G  G+    G    P FP A G   + G A  P P         R +RG    T +
Sbjct: 801  PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK 860

Query: 130  LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP-------PVYLGNKPT 182
             G K                  + PP PP      G +     P       P      P 
Sbjct: 861  PGPKGTSGG-------------DGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPG 907

Query: 183  PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP--------PARPPAYESREGPRGRAE 234
             P Q G  G + K+ PP P     P    G T P        P  PP  +   G  G+  
Sbjct: 908  HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 967

Query: 235  SRG----------SGPAQ----PAHLPLPGPAHSP---------APPAPELREG-RAPGS 270
            ++G           GPA     P    LPG   +P          PP P    G R    
Sbjct: 968  AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAG 1027

Query: 271  TAG-----RRPRPREPQA-AEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRR 324
            TAG      RP P+ P   A E G       +G   R G   P    G            
Sbjct: 1028 TAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDG 1087

Query: 325  RRGGGGE-----GEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 371
             +G  GE      +G    +GP  PPG +    VGA  +  G GE   RG Q
Sbjct: 1088 DKGEIGEPGQKGSKGDKGENGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQ 1137



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 71/277 (25%), Positives = 91/277 (32%), Gaps = 45/277 (16%)

Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207
           P  + QE   +AI Q+          P+ L  +P P    GS G + +S  P PQ     
Sbjct: 468 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 527

Query: 208 APQPGPTAPPAR--PPAYESREGPRGRAESRGSG--------PAQPAHLPLPGPAHSPAP 257
              PGPT  P +   P  +   G  G   ++G          P    H    GP   P P
Sbjct: 528 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 587

Query: 258 PAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERC 317
           P  +   G       G R  P E       G        G    AG   PP   GN    
Sbjct: 588 PGDDGMRGE--DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 645

Query: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE-EVGAAVLRAGSGEGSRRGLQ----- 371
                  ++G  G  +G     GP  PPG +  + + G A L    G     G +     
Sbjct: 646 GEPGPPGQQGNPGP-QGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGE 704

Query: 372 ---LTPP----------PRRVHGALQRFGGGRNLKSN 395
              L PP          PR V GA     G R LK +
Sbjct: 705 KGALGPPGPQGPIGYPGPRGVKGA----DGVRGLKGS 737



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 63/235 (26%), Positives = 82/235 (34%), Gaps = 47/235 (20%)

Query: 174  PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPAR--------- 219
            P+ L   P PP ++G  G     G P   PP P+    P    GP  PP           
Sbjct: 1157 PIGLQGLPGPPGEKGENGDVGPMGPP--GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGE 1214

Query: 220  -----------PPAYESREGPRG-RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGR- 266
                       PP      GP+G R E   +GP   A     GP  +  PP  +  +G  
Sbjct: 1215 KGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAA-----GPPGAKGPPGDDGPKGNP 1269

Query: 267  APGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRR 325
             P    G    P EP  A + G   VG  +G+    G   PP  SG  G      +R   
Sbjct: 1270 GPVGFPGDPGPPGEPGPAGQDG---VGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPP 1326

Query: 326  RGGGGEG----EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 376
               G EG    +G     G   PPG+      G    +  +G+    GL+  P P
Sbjct: 1327 GAAGAEGRQGEKGAKGEAGAEGPPGK-----TGPVGPQGPAGKPGPEGLRGIPGP 1376



 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 183  PPRQEGSFGGR----PKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS 238
            PP ++G  G R     +  P    +   P P  GP  PP  PP     +GP+G   S  +
Sbjct: 1424 PPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPA-GPLGPPG-PPGLPGPQGPKGNKGS--T 1479

Query: 239  GPA-QPAHLPLPGPAHSPAPP 258
            GPA Q     LPGP  SP PP
Sbjct: 1480 GPAGQKGDSGLPGPPGSPGPP 1500



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 60/237 (25%), Positives = 75/237 (31%), Gaps = 43/237 (18%)

Query: 165 GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--PA 222
           G+ A+ + P + +   P P    G  G      PP  Q    P   PG   PP RP  P 
Sbjct: 390 GEPAVVE-PGMLVEGPPGPAGPAGIMG------PPGLQGPTGPPGDPGDRGPPGRPGLPG 442

Query: 223 YESREGPRG--------------------RAESRGSGPAQPAHLPL---PGPAHSPAPPA 259
            +   GP G                      E++     Q A + L   PGP      P 
Sbjct: 443 ADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPG 502

Query: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCAT--VGLRRGDCDRAGSSQPPATSGNGERC 317
           P    G +        P P+ P+  +     T   G R       G   P      G+R 
Sbjct: 503 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR- 561

Query: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPG----RRHDEEVGAAVLRAGSGEGSRRGL 370
            F       G  G   G     GP  PPG    R  D E+G    R   GE   RGL
Sbjct: 562 GFDGLPGLPGDKGH-RGERGPQGPPGPPGDDGMRGEDGEIGP---RGLPGEAGPRGL 614



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 60/254 (23%), Positives = 78/254 (30%), Gaps = 34/254 (13%)

Query: 188  GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--------PAYESREGPRGRAESRGSG 239
            G  G R +  P  P+  A P   PGP+              P Y  R+GP+G     G  
Sbjct: 763  GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 822

Query: 240  PAQPAH-----LPLPGPAHSPAPPAPE-LREGRAP-------GSTAGRRPRPREPQAAEE 286
             A            PGP     P  P   R  R P       G++ G  P     +   +
Sbjct: 823  GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ 882

Query: 287  SGCATVGL--RRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASP 344
                 VG    +G     G    P   G      F  +    G GG   G     G   P
Sbjct: 883  GPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGV-VGPQGPTGETGP 941

Query: 345  PGRR-HDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG-----ALQRFGGGRNLKSNWMS 398
             G R H    G    +   G   + G +  P P+ + G      L+ F G R L      
Sbjct: 942  IGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLP----G 997

Query: 399  TTRTPRRSGASGPK 412
                P   G  GP+
Sbjct: 998  AQGAPGLKGGEGPQ 1011



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 53/214 (24%), Positives = 69/214 (32%), Gaps = 41/214 (19%)

Query: 94   KGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLEL 153
            KG     G+  PP P      P     RGP       G++ +  +     KG        
Sbjct: 1296 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA-----KGEAGA---- 1346

Query: 154  PPRPPPNLQEGGQRAIFQRP-PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212
               PP      G +    +P P  L   P P  ++G  G   +  PP P     P   PG
Sbjct: 1347 -EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPM---GPPGLPG 1402

Query: 213  PTAPPAR--------------PPAYESREGPRGRAESRGS----------GPAQPAHLPL 248
                P                PP  +  +G RG   ++GS          GPA P  L  
Sbjct: 1403 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGP--LGP 1460

Query: 249  PGPAHSPAPPAPELREG-RAPGSTAGRRPRPREP 281
            PGP   P P  P+  +G   P    G    P  P
Sbjct: 1461 PGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPP 1494


>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
            sapiens]
          Length = 1806

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 91/352 (25%), Positives = 111/352 (31%), Gaps = 65/352 (18%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129
            P   G  G+    G    P FP A G   + G A  P P         R +RG    T +
Sbjct: 840  PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK 899

Query: 130  LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP-------PVYLGNKPT 182
             G K                  + PP PP      G +     P       P      P 
Sbjct: 900  PGPKGTSGG-------------DGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPG 946

Query: 183  PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP--------PARPPAYESREGPRGRAE 234
             P Q G  G + K+ PP P     P    G T P        P  PP  +   G  G+  
Sbjct: 947  HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 1006

Query: 235  SRG----------SGPAQ----PAHLPLPGPAHSP---------APPAPELREG-RAPGS 270
            ++G           GPA     P    LPG   +P          PP P    G R    
Sbjct: 1007 AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAG 1066

Query: 271  TAG-----RRPRPREPQA-AEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRR 324
            TAG      RP P+ P   A E G       +G   R G   P    G            
Sbjct: 1067 TAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDG 1126

Query: 325  RRGGGGE-----GEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 371
             +G  GE      +G    +GP  PPG +    VGA  +  G GE   RG Q
Sbjct: 1127 DKGEIGEPGQKGSKGDKGENGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQ 1176



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 71/277 (25%), Positives = 91/277 (32%), Gaps = 45/277 (16%)

Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207
           P  + QE   +AI Q+          P+ L  +P P    GS G + +S  P PQ     
Sbjct: 507 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 566

Query: 208 APQPGPTAPPAR--PPAYESREGPRGRAESRGSG--------PAQPAHLPLPGPAHSPAP 257
              PGPT  P +   P  +   G  G   ++G          P    H    GP   P P
Sbjct: 567 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 626

Query: 258 PAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERC 317
           P  +   G       G R  P E       G        G    AG   PP   GN    
Sbjct: 627 PGDDGMRGE--DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 684

Query: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE-EVGAAVLRAGSGEGSRRGLQ----- 371
                  ++G  G  +G     GP  PPG +  + + G A L    G     G +     
Sbjct: 685 GEPGPPGQQGNPGP-QGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGE 743

Query: 372 ---LTPP----------PRRVHGALQRFGGGRNLKSN 395
              L PP          PR V GA     G R LK +
Sbjct: 744 KGALGPPGPQGPIGYPGPRGVKGA----DGVRGLKGS 776



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 63/235 (26%), Positives = 82/235 (34%), Gaps = 47/235 (20%)

Query: 174  PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPAR--------- 219
            P+ L   P PP ++G  G     G P   PP P+    P    GP  PP           
Sbjct: 1196 PIGLQGLPGPPGEKGENGDVGPMGPP--GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGE 1253

Query: 220  -----------PPAYESREGPRG-RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGR- 266
                       PP      GP+G R E   +GP   A     GP  +  PP  +  +G  
Sbjct: 1254 KGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAA-----GPPGAKGPPGDDGPKGNP 1308

Query: 267  APGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRR 325
             P    G    P EP  A + G   VG  +G+    G   PP  SG  G      +R   
Sbjct: 1309 GPVGFPGDPGPPGEPGPAGQDG---VGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPP 1365

Query: 326  RGGGGEG----EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 376
               G EG    +G     G   PPG+      G    +  +G+    GL+  P P
Sbjct: 1366 GAAGAEGRQGEKGAKGEAGAEGPPGK-----TGPVGPQGPAGKPGPEGLRGIPGP 1415



 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 183  PPRQEGSFGGR----PKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS 238
            PP ++G  G R     +  P    +   P P  GP  PP  PP     +GP+G   S  +
Sbjct: 1463 PPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPA-GPLGPPG-PPGLPGPQGPKGNKGS--T 1518

Query: 239  GPA-QPAHLPLPGPAHSPAPP 258
            GPA Q     LPGP  SP PP
Sbjct: 1519 GPAGQKGDSGLPGPPGSPGPP 1539



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 60/237 (25%), Positives = 75/237 (31%), Gaps = 43/237 (18%)

Query: 165 GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--PA 222
           G+ A+ + P + +   P P    G  G      PP  Q    P   PG   PP RP  P 
Sbjct: 429 GEPAVVE-PGMLVEGPPGPAGPAGIMG------PPGLQGPTGPPGDPGDRGPPGRPGLPG 481

Query: 223 YESREGPRG--------------------RAESRGSGPAQPAHLPL---PGPAHSPAPPA 259
            +   GP G                      E++     Q A + L   PGP      P 
Sbjct: 482 ADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPG 541

Query: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCAT--VGLRRGDCDRAGSSQPPATSGNGERC 317
           P    G +        P P+ P+  +     T   G R       G   P      G+R 
Sbjct: 542 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR- 600

Query: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPG----RRHDEEVGAAVLRAGSGEGSRRGL 370
            F       G  G   G     GP  PPG    R  D E+G    R   GE   RGL
Sbjct: 601 GFDGLPGLPGDKGH-RGERGPQGPPGPPGDDGMRGEDGEIGP---RGLPGEAGPRGL 653



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 60/254 (23%), Positives = 78/254 (30%), Gaps = 34/254 (13%)

Query: 188  GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--------PAYESREGPRGRAESRGSG 239
            G  G R +  P  P+  A P   PGP+              P Y  R+GP+G     G  
Sbjct: 802  GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 861

Query: 240  PAQPAH-----LPLPGPAHSPAPPAPE-LREGRAP-------GSTAGRRPRPREPQAAEE 286
             A            PGP     P  P   R  R P       G++ G  P     +   +
Sbjct: 862  GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ 921

Query: 287  SGCATVGL--RRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASP 344
                 VG    +G     G    P   G      F  +    G GG   G     G   P
Sbjct: 922  GPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGV-VGPQGPTGETGP 980

Query: 345  PGRR-HDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG-----ALQRFGGGRNLKSNWMS 398
             G R H    G    +   G   + G +  P P+ + G      L+ F G R L      
Sbjct: 981  IGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLP----G 1036

Query: 399  TTRTPRRSGASGPK 412
                P   G  GP+
Sbjct: 1037 AQGAPGLKGGEGPQ 1050



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 53/214 (24%), Positives = 69/214 (32%), Gaps = 41/214 (19%)

Query: 94   KGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLEL 153
            KG     G+  PP P      P     RGP       G++ +  +     KG        
Sbjct: 1335 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA-----KGEAGA---- 1385

Query: 154  PPRPPPNLQEGGQRAIFQRP-PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212
               PP      G +    +P P  L   P P  ++G  G   +  PP P     P   PG
Sbjct: 1386 -EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPM---GPPGLPG 1441

Query: 213  PTAPPAR--------------PPAYESREGPRGRAESRGS----------GPAQPAHLPL 248
                P                PP  +  +G RG   ++GS          GPA P  L  
Sbjct: 1442 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGP--LGP 1499

Query: 249  PGPAHSPAPPAPELREG-RAPGSTAGRRPRPREP 281
            PGP   P P  P+  +G   P    G    P  P
Sbjct: 1500 PGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPP 1533


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 74/286 (25%), Positives = 107/286 (37%), Gaps = 49/286 (17%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212
           P  PPP   +G +    + PP     KP  P  +G  G +P+  PP P +   P PQ G 
Sbjct: 77  PQGPPP---QGDKSRSPRSPP----GKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGN 127

Query: 213 -PTAPPARPPAYESREGPRG-RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGS 270
            P  PP  PP       P+G ++ S  S P +P   P P   + P  P P   + + P  
Sbjct: 128 RPQGPP--PPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPP 184

Query: 271 TAGRRPR----PREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRR 326
             G++P+    P +PQ     G           D++ SSQ P     G   +        
Sbjct: 185 QGGKKPQGPPPPGKPQGPPPQG-----------DKSRSSQSPPGKPQGPPPQ-------- 225

Query: 327 GGGGEGEGTHATHG-PASPPGRRHDEEVGAAVLRAGSG---EGSRRGLQLTPPPRRVHGA 382
            GG + +G     G P  PP +  ++  G        G   +G  +      PP +  G 
Sbjct: 226 -GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGP 284

Query: 383 LQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAG 428
            Q+   G N +         P++  A      A Q  G  RPP  G
Sbjct: 285 PQQ--EGNNPQGPPPPAGGNPQQPQAP----PAGQPQGPPRPPQGG 324



 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 30/180 (16%)

Query: 171 QRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG--PTAPPARPPAYESREG 228
           +  P  +   P  P  +G  G +P+  PP P +   P PQ G  P  PP  PP       
Sbjct: 26  EESPSLIAGNPQGPSPQG--GNKPQGPPPPPGKPQGPPPQGGNKPQGPP--PPGKPQGPP 81

Query: 229 PRG-RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEES 287
           P+G ++ S  S P +P   P P   + P  P P   + + P    G RP+   P      
Sbjct: 82  PQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPP------ 134

Query: 288 GCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR 347
                             +P      G++ R  R    +  G   +G +   GP  PPG+
Sbjct: 135 ----------------PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK 178



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 33/107 (30%), Positives = 37/107 (34%), Gaps = 27/107 (25%)

Query: 155 PRPPPNLQEGGQRAIFQRPPVYLGNKPT----------PPRQEGSFGGRPKSQPPLPQ-- 202
           P PPP   +G        PP   GNKP           PP Q GS     +S P  PQ  
Sbjct: 233 PPPPPGKPQG--------PPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGP 284

Query: 203 -------ETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQ 242
                      P P  G    P  PPA + +  PR     R S P Q
Sbjct: 285 PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 331


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 47/167 (28%), Positives = 67/167 (40%), Gaps = 20/167 (11%)

Query: 155 PRPPPNLQEG-----GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAP 209
           P PPP   EG     G ++  Q PP + G    PP Q G+   + +  PP P +   P P
Sbjct: 71  PPPPPGKPEGRPPQGGNQS--QGPPPHPGKPERPPPQGGN---QSQGTPPPPGKPERPPP 125

Query: 210 QPGPTAP-PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAP 268
           Q G  +  P  PP    R  P+G  +S+G         P P P     PP  E  + R+ 
Sbjct: 126 QGGNQSHRPPPPPGKPERPPPQGGNQSQG---------PPPHPGKPEGPPPQEGNKSRSA 176

Query: 269 GSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGE 315
            S  G+   P + +  +  G    G  +G     G+ Q P     G+
Sbjct: 177 RSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGK 223



 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 15/134 (11%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGP 213
           P RPPP   +GG ++   RPP   G    PP Q G+    P   PP P +   P PQ G 
Sbjct: 120 PERPPP---QGGNQS--HRPPPPPGKPERPPPQGGNQSQGP---PPHPGKPEGPPPQEGN 171

Query: 214 TAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPA-----HSPAPPAPELREGRAP 268
            +  AR P  +  +GP  +  ++  GP  P     P PA        APPA +  +G  P
Sbjct: 172 KSRSARSPPGKP-QGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGK-PQGPPP 229

Query: 269 GSTAGRRPRPREPQ 282
               GR PRP + Q
Sbjct: 230 PPQGGRPPRPAQGQ 243



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 42/128 (32%), Positives = 51/128 (39%), Gaps = 28/128 (21%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQ-----ETAAPA 208
           P RPPP   +GG ++  Q PP + G    PP QEG+     +S P  PQ     E   P 
Sbjct: 141 PERPPP---QGGNQS--QGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQ 195

Query: 209 PQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAP 268
             P P  P   PPA              G  P QP   P   P   P PP    + GR P
Sbjct: 196 GPPPPGKPQGPPPA--------------GGNPQQPQAPPAGKPQGPPPPP----QGGRPP 237

Query: 269 GSTAGRRP 276
               G++P
Sbjct: 238 RPAQGQQP 245



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 59/229 (25%), Positives = 83/229 (36%), Gaps = 13/229 (5%)

Query: 163 EGGQRAIFQRPPVYL-GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG-PTAPPARP 220
           E     + Q   ++L   KP   R +G  G +P+  PP P +   P PQ G  +  P  P
Sbjct: 17  ESSSEDVSQEESLFLISGKPEGRRPQG--GNQPQRPPPPPGKPQGPPPQGGNQSQGPPPP 74

Query: 221 PAYESREGPRGRAESRG--SGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP 278
           P       P+G  +S+G    P +P   P  G   S   P P  +  R P     +  RP
Sbjct: 75  PGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRP 134

Query: 279 REPQAAEESGCATVGLR-RGDCDRAGSSQ-PPATSGNGERCRFCRRRRRRG----GGGEG 332
             P    E      G + +G     G  + PP   GN  R       + +G     G + 
Sbjct: 135 PPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKP 194

Query: 333 EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG 381
           +G      P  PP    + +   A   AG  +G     Q   PPR   G
Sbjct: 195 QGPPPPGKPQGPPPAGGNPQQPQAP-PAGKPQGPPPPPQGGRPPRPAQG 242



 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 9/94 (9%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGP 213
           P  PPP  QEG +    + PP   G    PP+QEG+   +P+  PP P +   P P  G 
Sbjct: 162 PEGPPP--QEGNKSRSARSPP---GKPQGPPQQEGN---KPQGPPP-PGKPQGPPPAGGN 212

Query: 214 TAPPARPPAYESREGPRGRAESRGSGPAQPAHLP 247
              P  PPA + +  P      R   PAQ    P
Sbjct: 213 PQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQPP 246



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 47/158 (29%), Positives = 56/158 (35%), Gaps = 46/158 (29%)

Query: 70  PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEG--RATPPLPHPGDHHPRHRKNRGPSAGT 127
           P+R    G   +H   R P  P      P +G  ++  P PHPG       K  GP    
Sbjct: 120 PERPPPQGGNQSH---RPPPPPGKPERPPPQGGNQSQGPPPHPG-------KPEGPPP-- 167

Query: 128 SQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQE 187
            Q G K++                    R PP   +G        PP   GNKP  P   
Sbjct: 168 -QEGNKSRSA------------------RSPPGKPQG--------PPQQEGNKPQGPPPP 200

Query: 188 GSFGGRPKS--QPPLPQETAAPAPQPGPTAPP--ARPP 221
           G   G P +   P  PQ   A  PQ GP  PP   RPP
Sbjct: 201 GKPQGPPPAGGNPQQPQAPPAGKPQ-GPPPPPQGGRPP 237


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 94/364 (25%), Positives = 115/364 (31%), Gaps = 87/364 (23%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHP-GDHHPRH-RKNRGPSAGT 127
            P   G  G+    G +  P FP A G     GR TP  P P G   P   R  RGP   T
Sbjct: 870  PGLPGYPGRQGPKGSIGFPGFPGANGE--KGGRGTPGKPGPRGQRGPTGPRGERGPRGIT 927

Query: 128  SQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP---- 183
             + G K                  + P  PP      G     Q P  + G K  P    
Sbjct: 928  GKPGPKGNSGG-------------DGPAGPPGERGPNGP----QGPTGFPGPKGPPGPPG 970

Query: 184  -------PRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP--------PARPPAYESREG 228
                   P Q G  G + K+ PP P     P    G T P        P  PP  +   G
Sbjct: 971  KDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPG 1030

Query: 229  PRGRAESRGS-GPAQ-------------PAHLPLPGPAHS---------PAPPAPELREG 265
              G+  ++G  GPA              P    LPGP  +         P PP P    G
Sbjct: 1031 LAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPG 1090

Query: 266  -RAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRR 324
             R P   AG    P  P      G A      G+    G   P   +G            
Sbjct: 1091 ERGPAGAAGPIGIPGRPGPQGPPGPA------GEKGAPGEKGPQGPAG------------ 1132

Query: 325  RRGGGGEGEGTHATHGPASPPGRRHDE-EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGAL 383
             R G     G     GP  PPG   D+ E+G    +   G+   +G Q  P P    G +
Sbjct: 1133 -RDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD---KGEQGPPGPTGPQGPI 1188

Query: 384  QRFG 387
             + G
Sbjct: 1189 GQPG 1192



 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 75/294 (25%), Positives = 99/294 (33%), Gaps = 46/294 (15%)

Query: 91   PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALL 150
            P  KGS   +G   PP P  G   P  +   GPS    + G + Q        +GL    
Sbjct: 1164 PGQKGSKGDKGEQGPPGP-TGPQGPIGQP--GPSGADGEPGPRGQ--------QGLFGQK 1212

Query: 151  LELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ 210
             +  PR  P              PV L   P PP ++G  G   +  PP P     P+  
Sbjct: 1213 GDEGPRGFPG----------PPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGA 1262

Query: 211  PGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGS 270
            PG   P   P       G  G    +G  P +     LPG    P P      +G +  S
Sbjct: 1263 PGADGPQGPPGGI----GNPGAVGEKGE-PGEAGEPGLPGEGGPPGPKGERGEKGESGPS 1317

Query: 271  TAGRRPRPREPQAAE--ESGCATVGL-----RRGDCDRAGSSQPPATSG-NGERCRFCRR 322
             A   P P+ P   +  +     VG        G+   AG   PP   G +GE       
Sbjct: 1318 GAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGE------- 1370

Query: 323  RRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 376
                 G     G     GP+ PPG+R          R G  +G++    L  PP
Sbjct: 1371 ----PGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGE-KGAKGEAGLEGPP 1419



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 64/263 (24%), Positives = 84/263 (31%), Gaps = 39/263 (14%)

Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207
           P  + QE   +AI Q+          P+ L  +P P    GS G + +     PQ     
Sbjct: 537 PMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGV 596

Query: 208 APQPGPTAPPARPPAYES--------REGPRGRAESRGSG--PAQPAHLPLPGPAHSPAP 257
              PGP   P R     S        + GP+G     G    P +  H   PGP+  P P
Sbjct: 597 QGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGP 656

Query: 258 PAPELREG-------------RAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGS 304
           P  +   G               P    G +  P  P     +G       +G+    G 
Sbjct: 657 PGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGE 716

Query: 305 SQPPATSGNGERCRFCRRRRRRGGGGE-----GEGTHATHGPASPPGRRHDEEVGAAVLR 359
             PP   GN         +   G  GE       G     G   PPG  H  + G    +
Sbjct: 717 PGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPG--HPGKEGPPGEK 774

Query: 360 AGSGEGSRRGLQLTPPPRRVHGA 382
            G G    +G    P PR V GA
Sbjct: 775 GGQGPPGPQGPIGYPGPRGVKGA 797



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 59/203 (29%), Positives = 74/203 (36%), Gaps = 22/203 (10%)

Query: 199 PLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPA--QPAHL----PLP-GP 251
           P    T++P+ + GP  P  +   YE   GPRG    +G  PA  +P  L    P P GP
Sbjct: 419 PYYDPTSSPS-EIGPGMPANQDTIYEGIGGPRGEKGQKGE-PAIIEPGMLIEGPPGPEGP 476

Query: 252 AHSPAPPAPELREGRAPGSTAGRRP--RPREPQAAEESG----CATVGLRRGDCDRAGSS 305
           A  P PP      G+  G    R P  RP  P A    G       +  R G    AGS 
Sbjct: 477 AGLPGPPGTMGPTGQV-GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSK 535

Query: 306 QPPATSGNGERCRFCRRRRRRGGGGEGE-GTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364
            P  ++   +     ++ R    G  G  G     GP  PPG       G        G 
Sbjct: 536 GPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPG-----SGGLKGEPGDVGP 590

Query: 365 GSRRGLQLTPPPRRVHGALQRFG 387
              RG+Q  P P    G   R G
Sbjct: 591 QGPRGVQGPPGPAGKPGRRGRAG 613



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 52/212 (24%), Positives = 69/212 (32%), Gaps = 45/212 (21%)

Query: 181 PTPPRQEGSFGGR----PKSQP--PLPQETAAPAPQPGPTAPPA---------------- 218
           P PP  +G  G      P+  P  P P+    P   PGP  PP                 
Sbjct: 654 PGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGP 713

Query: 219 ----RPPAYESREGPRGRAESRGS----GPAQPAHLP-LPGPAHSPAPPAPELREGRAPG 269
                PP  +   G +G    +G+    G   P   P LPG   +  PP    +EG  PG
Sbjct: 714 QGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPG 772

Query: 270 STAGRRPRPRE-----PQAAEESGCATVGLRRGDCDRAGSSQPPATSGN----GERCRFC 320
              G+ P   +     P      G   +   +G     G    P   G+    G+R    
Sbjct: 773 EKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIG 832

Query: 321 RRRRRRGGGGEGE----GTHATHGPASPPGRR 348
               R   G EG     G +   GP  PPG +
Sbjct: 833 PPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEK 864



 Score = 36.2 bits (82), Expect = 0.064
 Identities = 55/216 (25%), Positives = 74/216 (34%), Gaps = 39/216 (18%)

Query: 91   PVAKGSVPSEGRATPPLP--HPGDHHPRHRKNR-GPSAGTSQLGKKTQCRSLFLRTKGLC 147
            P  KG     G+   P P   PG   P  ++   GP+    + G+K          KG  
Sbjct: 1362 PGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKG--------AKGEA 1413

Query: 148  ALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207
             L  E PP     +  G Q A  +  P  L   P P  ++G  G      PP P      
Sbjct: 1414 GL--EGPPGKTGPI--GPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGL 1469

Query: 208  APQPGPTAPPAR-----------PPAYESREGPRGRAESRGS----------GPAQPAHL 246
                G + P              PP  +  +G RG    +GS          GP+ P  +
Sbjct: 1470 PGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGP--I 1527

Query: 247  PLPGPAHSPAPPAPELREGRA-PGSTAGRRPRPREP 281
              PGP   P PP P+  +G + P    G    P  P
Sbjct: 1528 GPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPP 1563



 Score = 32.3 bits (72), Expect = 0.93
 Identities = 52/196 (26%), Positives = 66/196 (33%), Gaps = 52/196 (26%)

Query: 70   PKRSGDMGKYHAHGH-----LRAPVFPVAKGSVP-SEGRATPPLPHPGDHHPRHRKNRGP 123
            P ++G +G   A G      LR    PV +  +P S G   PP P      P  + + GP
Sbjct: 1419 PGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGP 1478

Query: 124  SAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP 183
                   G+K           GL  L+      PP    E G R +              
Sbjct: 1479 K------GEKGH--------PGLIGLI-----GPPGEQGEKGDRGL-------------- 1505

Query: 184  PRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQP 243
            P  +GS G + +     P     P   PG   PP          GP+G   S  SGP  P
Sbjct: 1506 PGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPP----------GPKGAKGS--SGPTGP 1553

Query: 244  -AHLPLPGPAHSPAPP 258
                  PGP   P PP
Sbjct: 1554 KGEAGHPGPPGPPGPP 1569


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 76/266 (28%), Positives = 91/266 (34%), Gaps = 50/266 (18%)

Query: 146  LCALLLELPPRPPPNLQEGGQRAIFQRPPVYL--GNKPTPPRQ--EGSFGGRPKSQPPLP 201
            LC       PRP P              PVY   G K  P      G  G  P   P LP
Sbjct: 1233 LCQASFTTQPRPEPC-------------PVYCPKGQKGEPGEMGLRGQVG--PPGDPGLP 1277

Query: 202  QETAAPAPQPGPTAPPARP----PAYESREGPRGRAESRGS--GPAQPAHLPLPGPAHSP 255
              T AP PQ  P +  A+     P  + R G  GRA + G+   P       LPGP   P
Sbjct: 1278 GRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDP 1337

Query: 256  APPAPELREGR--APGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGN 313
                P   +G   APG   G    P  P    + G +     RG     G   PP   G 
Sbjct: 1338 GERGPRGPKGEPGAPGQVIGGE-GPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGT 1396

Query: 314  GER-CRFCRRRRRRGGGGEG------------EGTHATHGPASPPGR---RHDEEVGAAV 357
              +  +  R  R   G GEG             G+    GP  PPG+   + D E GA  
Sbjct: 1397 AMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPG 1456

Query: 358  LRAGSGEGSRRGLQLTPPPRRVHGAL 383
            L    G    +G      PR   GA+
Sbjct: 1457 LPGQPGSPGEQG------PRGPPGAI 1476



 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 96/381 (25%), Positives = 117/381 (30%), Gaps = 79/381 (20%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129
            P   GD G+    G    P  P  +G    EG+       PG   PR     GP  G   
Sbjct: 2134 PGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGK-------PGLQGPRGPP--GPVGGHGD 2184

Query: 130  LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQ----EGGQRAIFQRPPVYLGNKPTPPR 185
             G             G   L     P+ P  L+    E G        P      P PP 
Sbjct: 2185 PGPP-----------GAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPG 2233

Query: 186  QEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAH 245
              G  G  P+  P LP        Q G T  P  P     R+G  G+   RGS P  P  
Sbjct: 2234 PSGLVG--PQGSPGLPG-------QVGETGKPGAP----GRDGASGKDGDRGS-PGVPGS 2279

Query: 246  LPLPGPAHSPAPPAPELREGRA-------------PGSTAGRRPRPREPQAAEESGCATV 292
              LPGP      P P    G+A             PG  AG      EP A  + G    
Sbjct: 2280 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAG--DLVGEPGAKGDRGLPGP 2337

Query: 293  GLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEE 352
               +G+  RAG    P   G            +   G  G G   + GP  PPG + D  
Sbjct: 2338 RGEKGEAGRAGEPGDPGEDGQKGA-----PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392

Query: 353  V----GAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGA 408
            +    GA  +    G+   RG    P P           G R L          P R G 
Sbjct: 2393 LPGLPGAPGVVGFPGQTGPRGEMGQPGP----------SGERGLAG-------PPGREGI 2435

Query: 409  SGPKMVADQTSGISRPPTAGI 429
             GP         +  P  +G+
Sbjct: 2436 PGPLGPPGPPGSVGPPGASGL 2456



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 54/205 (26%), Positives = 71/205 (34%), Gaps = 25/205 (12%)

Query: 178  GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP-PAYESREGPRGRAESR 236
            G  P  P ++G  G    S PP P+    P   PGP  PP  P  A +  +G RG     
Sbjct: 1358 GEGPGLPGRKGDPG---PSGPPGPR---GPLGDPGPRGPPGLPGTAMKGDKGDRGERGPP 1411

Query: 237  GSG-----PAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESG--- 288
            G G     P +P    LPG      P  P  ++G    S  G    P +P +  E G   
Sbjct: 1412 GPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRG 1471

Query: 289  -CATVGLR--------RGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATH 339
                +G +         G+    G   PP  +G+        R   +G  G   G     
Sbjct: 1472 PPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGP-PGPTGRQ 1530

Query: 340  GPASPPGRRHDEEVGAAVLRAGSGE 364
            G    PGR  D  V    +    GE
Sbjct: 1531 GEKGEPGRPGDPAVVGPAVAGPKGE 1555



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 67/257 (26%), Positives = 88/257 (34%), Gaps = 52/257 (20%)

Query: 154  PPRPPPNLQEGGQRAIFQRPPVYLGNK-PTPPRQEGSFGGRPKSQ-------PPLPQE-- 203
            PP PP  L + G  A  +  P   G + P  P+ +    G P  +       PP PQ   
Sbjct: 1701 PPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDP 1760

Query: 204  -TAAPAPQPGPTAPPARP--------PAYESREGPRGRAESRGSG-----PAQPAHLPLP 249
                PA + G   PP           P      GP G A   G       P       LP
Sbjct: 1761 GVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLP 1820

Query: 250  GPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPA 309
            GP+  P  P     +G+ PG   G+   P +P    E G      R+G+   +G+S    
Sbjct: 1821 GPSGPPGLPGKPGEDGK-PGLN-GKNGEPGDPG---EDG------RKGEKGDSGASGREG 1869

Query: 310  TSG-NGERCRFCRRRRRRGGGGEG----EGTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364
              G  GER            G  G    +G     GP  PPG+      G    +   GE
Sbjct: 1870 RDGPKGER------------GAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGE 1917

Query: 365  GSRRGLQLTPPPRRVHG 381
               +G Q  P  R + G
Sbjct: 1918 TGSKGEQGLPGERGLRG 1934



 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 59/214 (27%), Positives = 67/214 (31%), Gaps = 30/214 (14%)

Query: 154  PPRPPPNLQEGGQRAIFQRP--PVYLGNKPTPPRQE-GSFG-GRPKSQPPLPQETAAPA- 208
            P  PP      G++    RP  P  +G     P+ E G  G   P+    +  E   P  
Sbjct: 1520 PEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGL 1579

Query: 209  ---PQPGPTAPPAR--PPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELR 263
                 PGP   P    P     R GP G      SGP  P     PG    P P  P  R
Sbjct: 1580 VLPGDPGPKGDPGDRGPIGLTGRAGPPG-----DSGP--PGEKGDPGRPGPPGPVGPRGR 1632

Query: 264  EGRAPGSTAGRRPR--PREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCR 321
            +G   G      P   P  P  A E G       RG     G    P   G         
Sbjct: 1633 DGEV-GEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDG--------- 1682

Query: 322  RRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGA 355
             R    G    +G     GP  PPGR  D   GA
Sbjct: 1683 -RNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGA 1715



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 53/198 (26%), Positives = 64/198 (32%), Gaps = 23/198 (11%)

Query: 198  PPLPQETAAPAPQPGPTAPPARPPAY--ESREGPRGRAESRGSGPAQPAHLP--LPGPAH 253
            PP P   A    +PG    P R        R G RG    +G    Q    P  LPG   
Sbjct: 2026 PPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPG 2085

Query: 254  SPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGN 313
             P PP P++         +G +  P    A  E G        GD    G    P   G+
Sbjct: 2086 PPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPG------SNGDQGPKGDRGVPGIKGD 2139

Query: 314  -------GERCRFCRRRRRRGGGGEGE-GTHATHGPASPPGRRHDE-EVGAAVLRAGSGE 364
                   G+         R   G EG+ G     GP  P G   D    GA  L   +G 
Sbjct: 2140 RGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGP 2199

Query: 365  GSRRGLQLTP----PPRR 378
                GL+  P    PP R
Sbjct: 2200 QGPSGLKGEPGETGPPGR 2217



 Score = 32.3 bits (72), Expect = 0.93
 Identities = 55/220 (25%), Positives = 62/220 (28%), Gaps = 68/220 (30%)

Query: 181  PTPPRQEGSFGGRPKSQPP-------LPQETAAPAPQ--PGPTAPPA------RPP---- 221
            P P R+ G  G   +  PP        P E      +  PGP  PP        PP    
Sbjct: 1972 PVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSG 2031

Query: 222  --------------------AYESREGPRGRAESRG----SGPAQPAHLP-LPGPAHSPA 256
                                    R G RG    +G     G   P  LP  PGP   P 
Sbjct: 2032 LAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPG 2091

Query: 257  P------PAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPAT 310
            P      P P L   + P    G +  P         G   V   +GD    G   P   
Sbjct: 2092 PKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGD---RGEPGPRGQ 2148

Query: 311  SGN----GERCRFCRRRRRRGGGGEGEGTHATHGPASPPG 346
             GN    GER           G    EG     GP  PPG
Sbjct: 2149 DGNPGLPGER-----------GMAGPEGKPGLQGPRGPPG 2177


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 54/198 (27%), Positives = 76/198 (38%), Gaps = 36/198 (18%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212
           P  PPP   +G  ++   R P     KP  P  +G  G +P+  PP P +   P PQ G 
Sbjct: 159 PQGPPP---QGDNKSRSSRSPP---GKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGN 210

Query: 213 -PTAPPARPPAYESREGPRG--RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPG 269
            P  PP  PP       P+G  +++S  S P +P   P P   + P  P P   + + P 
Sbjct: 211 KPQGPP--PPGKPQGPPPQGDNKSQSARSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPP 267

Query: 270 STAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGG 329
              G +P+   P                     G  Q P   G G + R  R    +  G
Sbjct: 268 PQGGNKPQGPPP--------------------PGKPQGPPPQG-GSKSRSSRSPPGKPQG 306

Query: 330 GEGEGTHATHGPASPPGR 347
              +G +   GP  PPG+
Sbjct: 307 PPPQGGNQPQGPPPPPGK 324



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 57/204 (27%), Positives = 76/204 (37%), Gaps = 37/204 (18%)

Query: 148 ALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207
           +L+   P   PP   +GG +   Q PP   G    PP Q G+   +P+  PP P +   P
Sbjct: 30  SLIAGNPQGAPP---QGGNKP--QGPPSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGP 81

Query: 208 APQPG--PTAPPARPPAYESREGPRG-RAESRGSGPAQPAHLPLPGPAHSPAPPAPELRE 264
            PQ G  P  PP  PP       P+G ++ S  S P +P   P  G      PP P    
Sbjct: 82  PPQGGNKPQGPP--PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPP---- 135

Query: 265 GRAPGSTAGRRPR-PREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRR 323
              PG   G  P+   +PQ     G       +GD     S  PP               
Sbjct: 136 ---PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPG-------------- 178

Query: 324 RRRGGGGEGEGTHATHGPASPPGR 347
             +  G   +G +   GP  PPG+
Sbjct: 179 --KPQGPPPQGGNQPQGPPPPPGK 200



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 27/180 (15%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212
           P  PPP      Q A  + PP     KP  P  +G  G +P+  PP P +   P PQ G 
Sbjct: 221 PQGPPPQGDNKSQSA--RSPP----GKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGN 272

Query: 213 -PTAPPARPPAYESREGPRGRAESRGS-GPAQPAHLPLPGPAHSPAPPAPELREGRAPGS 270
            P  PP  PP       P+G ++SR S  P      P P   + P  P P   + + P  
Sbjct: 273 KPQGPP--PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 330

Query: 271 TAGRRPR----PREPQ-------AAEESGCATVGLRRGDCDRAGSS---QPPATSGNGER 316
             G +P+    P +PQ       +   S  +  G  +G   + G++    PP   GN ++
Sbjct: 331 QGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQ 390



 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 55/196 (28%), Positives = 67/196 (34%), Gaps = 20/196 (10%)

Query: 70  PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129
           P   GD     A      P  P  +G    +G   PP    G       K +GP      
Sbjct: 224 PPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 283

Query: 130 LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGS 189
            G   Q  S    ++         P  PPP   +GG +   Q PP   G    PP Q   
Sbjct: 284 QGPPPQGGSKSRSSRSPPGK----PQGPPP---QGGNQP--QGPPPPPGKPQGPPPQ--- 331

Query: 190 FGGRPKSQPPLPQETAAPAPQPGPTA-----PPARPPAYESREG--PRGRAESRGSGPAQ 242
            GG     PP P +   P PQ G  +     PP +P     +EG  P+G     G  P Q
Sbjct: 332 -GGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQ 390

Query: 243 PAHLPLPGPAHSPAPP 258
           P   P   P   P PP
Sbjct: 391 PQAPPAGQPQGPPRPP 406



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 68/276 (24%), Positives = 92/276 (33%), Gaps = 55/276 (19%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKS-QPPLPQETAAPAPQPG 212
           P  PPP   +G +    + PP   G    PP Q    GG      PP P +   P PQ G
Sbjct: 98  PQGPPP---QGDKSRSPRSPP---GKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGG 147

Query: 213 --PTAPPARPPAYESREGPRGRAESRGS-GPAQPAHLPLPGPAHSPAPPAPELREGRAPG 269
             P  PP  PP       P+G  +SR S  P      P P   + P  P P   + + P 
Sbjct: 148 NKPQGPP--PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 205

Query: 270 STAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGG 329
              G +P+   P                     G  Q P   G+  + +  R    +  G
Sbjct: 206 PQGGNKPQGPPP--------------------PGKPQGPPPQGD-NKSQSARSPPGKPQG 244

Query: 330 GEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGG 389
              +G +   GP  PPG+             G         Q  PPP +  G   + GG 
Sbjct: 245 PPPQGGNQPQGPPPPPGKPQ-----------GPPPQGGNKPQGPPPPGKPQGPPPQ-GGS 292

Query: 390 RNLKSNWMSTTRTPRRSGASGPKMVADQTSGISRPP 425
           ++  S      R+P       P    +Q  G   PP
Sbjct: 293 KSRSS------RSPPGKPQGPPPQGGNQPQGPPPPP 322



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 15/77 (19%)

Query: 154 PPRPPPNLQEGGQRAIFQR--------PPVYLGNKPT-PPRQEGSFGGRPKSQPPLPQET 204
           P  PPP   +GG ++   R        PP   GN P  PP   G    +P++ PP  Q  
Sbjct: 345 PQGPPP---QGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA-PPAGQPQ 400

Query: 205 AAPAPQPGPTAPPARPP 221
             P P  G    P+RPP
Sbjct: 401 GPPRPPQG--GRPSRPP 415


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 69/295 (23%), Positives = 106/295 (35%), Gaps = 47/295 (15%)

Query: 54  AADIIARWSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSV-------PSEGRATPP 106
           AAD + +   Q+   N + S D G   +    R     V  G V       PS   +  P
Sbjct: 475 AADSVQQ-RRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSP 533

Query: 107 LPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQ 166
                +  PR R+ R PS   ++  +         R +          P PPP  +    
Sbjct: 534 RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 593

Query: 167 RAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESR 226
           R     PP+     P+PP +      R  S PP P+  A+P+P P      + PP   S 
Sbjct: 594 RRY--SPPIQRRYSPSPPPKR-----RTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS 646

Query: 227 EGPRGRAES------RGSGPAQP---AHLPLPGPAHSPAP-------------------P 258
              + R+ S      +GS P++    A  P P   HSP+P                    
Sbjct: 647 PVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS 706

Query: 259 APELREGRAPGSTAGRR----PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPA 309
           +P+ R+  +P +   RR    P P++ + A      +V         +GS +P A
Sbjct: 707 SPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAA 761



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 32/212 (15%)

Query: 116 RHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPV 175
           RH  +R  S    +  K+T  R    R+           P PPP  +   +R+    PP 
Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRRRRS-----------PSPPPTRR---RRSPSPAPPP 567

Query: 176 YLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP-----APQPGP---TAPPARPPAYESRE 227
                PTPP +  +    P+ + P P+  + P     +P P P   TA P  PP   +  
Sbjct: 568 RRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASP 627

Query: 228 GPRGRAESRGSGPAQPAHLP--------LPGPAHSPAPPAPELREGRAPGSTAGRRPRPR 279
            P  +     S P +    P        L       + P+   RE R+P       P PR
Sbjct: 628 SPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPR 687

Query: 280 EPQAAEESGCATVGLRRGDCDRAGSSQPPATS 311
            P+A + S  +   +RRG        Q P+ S
Sbjct: 688 -PRAPQTSS-SPPPVRRGASSSPQRRQSPSPS 717



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 65/261 (24%), Positives = 93/261 (35%), Gaps = 43/261 (16%)

Query: 156 RPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG--- 212
           RP P  +   +R   + PP  +   P   R       R +S   L   +++ +       
Sbjct: 314 RPSPRRRPSPRR---RTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSP 370

Query: 213 PTAPPAR---PPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPP-APELREGR-- 266
           P  PP R   PP    R  P      R   P+ PA  P P   HSP P  +   R+ R  
Sbjct: 371 PKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPA-TPPPKTRHSPTPQQSNRTRKSRVS 429

Query: 267 -APGSTAGR---------------RPRPREPQAAEESG------CATVGLRRGDCDRAGS 304
            +PG T+G+                P+PR+ + +E          A   +++    R  +
Sbjct: 430 VSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQN 489

Query: 305 SQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGP---ASPPGRRHDEEVGAAVLRAG 361
            Q  + SG+       R +R     GE  G    H P   ASP  R+  +E      R  
Sbjct: 490 QQSSSDSGSSSSSEDERPKRSHVKNGE-VGRRRRHSPSRSASPSPRKRQKETSPRGRRRR 548

Query: 362 SGE----GSRRGLQLTPPPRR 378
           S        RR     PPPRR
Sbjct: 549 SPSPPPTRRRRSPSPAPPPRR 569



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 88/406 (21%), Positives = 131/406 (32%), Gaps = 92/406 (22%)

Query: 98  PSEGRATPP--LPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPP 155
           PS  R TPP  +P P    PRHR++R P        ++    SL   +    +     PP
Sbjct: 321 PSPRRRTPPRRMPPP----PRHRRSRSPVRR-----RRRSSASLSGSSSSSSSSRSRSPP 371

Query: 156 RPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTA 215
           + PP       R   +  P       +PPR+       P + PP P+   +P PQ     
Sbjct: 372 KKPPKRTSSPPRKTRRLSP-----SASPPRRRHR--PSPPATPP-PKTRHSPTPQQSNRT 423

Query: 216 PPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGR--APGSTAG 273
             +R      R    G+         + +  P P P       + E + G+  A  S   
Sbjct: 424 RKSRVSVSPGRTS--GKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQ 481

Query: 274 RRP-RPREPQAAEESGCAT----------------VGLRRGDCDRAGSSQPPA-----TS 311
           RR  R +  Q++ +SG ++                VG RR       +S  P      TS
Sbjct: 482 RRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETS 541

Query: 312 GNGERCRFCR----RRRRRGGGGEGEGTHAT----------------------------- 338
             G R R       RRRR            T                             
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQ 601

Query: 339 --HGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGAL----------QRF 386
             + P+ PP RR          RA      +R +  +PPP++    +          +  
Sbjct: 602 RRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHR 661

Query: 387 GGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAGIGTS 432
            G    +S   + +  P +  +  P+  A QTS  S PP    G S
Sbjct: 662 KGSSPSRSTREARSPQPNKRHSPSPRPRAPQTS--SSPPPVRRGAS 705



 Score = 34.7 bits (78), Expect = 0.19
 Identities = 60/263 (22%), Positives = 84/263 (31%), Gaps = 62/263 (23%)

Query: 179 NKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS 238
           +K     +E S   R +S+ P  +++ +P+P+   ++P  R         PR R +SR  
Sbjct: 152 DKRDKEEKESSREKRERSRSPRRRKSRSPSPRRR-SSPVRRERKRSHSRSPRHRTKSRSP 210

Query: 239 GPA------------------QPA-----------HLPLPGPAHSPAPPAPEL------- 262
            PA                  +P+            +P P P   P  P+PE        
Sbjct: 211 SPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKE 270

Query: 263 REGRAPGS---------TAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSS----QPPA 309
           +E   P S         T  R P    P+    S   +   RR    R   S     PP 
Sbjct: 271 KEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPR 330

Query: 310 TSGNGERCRFCR---RRRRR------GGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 360
                 R R  R   RRRRR      G       + +   P  PP R          L  
Sbjct: 331 RMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSP 390

Query: 361 GSGEGSRR---GLQLTPPPRRVH 380
            +    RR       TPPP+  H
Sbjct: 391 SASPPRRRHRPSPPATPPPKTRH 413



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 184 PRQEGSFGGRPK-----SQPPLPQETAAPAPQ----PGPTAPPAR-------PPAYESRE 227
           P +  S   RP+     S PP  +  A+ +PQ    P P+  P R       P   +   
Sbjct: 678 PNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAA 737

Query: 228 GPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAP 260
            P  ++  R S     +  P P     PAPP+P
Sbjct: 738 SPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSP 770


>gi|22027541 programmed cell death 7 [Homo sapiens]
          Length = 485

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 46/127 (36%), Positives = 53/127 (41%), Gaps = 26/127 (20%)

Query: 155 PRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPT 214
           P PPP           Q PP      P PP    +F       PPLPQ    P P PG +
Sbjct: 12  PGPPPP----------QPPPPAPFGCPPPPLPSPAF------PPPLPQR---PGPFPGAS 52

Query: 215 APPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGR 274
           AP  +PP       PR  AE+   G    A  P+P P     PP P+ R    PG+ AG 
Sbjct: 53  APFLQPPLALQ---PRASAEASRGGGGAGAFYPVPPPPLP--PPPPQCRP--FPGTDAGE 105

Query: 275 RPRPREP 281
           RPRP  P
Sbjct: 106 RPRPPPP 112



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 45/148 (30%), Positives = 54/148 (36%), Gaps = 39/148 (26%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPP---RQEGSFGGR--PKSQPPLPQETAAPA 208
           PP+PPP        A F  PP  L +   PP   ++ G F G   P  QPPL  +  A A
Sbjct: 16  PPQPPPP-------APFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASA 68

Query: 209 ----------------PQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPA 252
                           P P P  PP   P   +  G R R    G GP      P     
Sbjct: 69  EASRGGGGAGAFYPVPPPPLPPPPPQCRPFPGTDAGERPRPPPPGPGPPWSPRWP----- 123

Query: 253 HSPAPPAPELREGRAPGSTAGRRPRPRE 280
            +P PPA  L      G  A +R R R+
Sbjct: 124 EAPPPPADVL------GDAALQRLRDRQ 145


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 93/343 (27%), Positives = 121/343 (35%), Gaps = 48/343 (13%)

Query: 99   SEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPP 158
            + GR  P    PG   P  R++  PS  + +  ++           GL   LL LPP  P
Sbjct: 1505 TSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEEN----------GLP--LLVLPPPAP 1552

Query: 159  PNLQEGGQRAIFQ--RPPVYLGN---KPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGP 213
                E G+    +   PP+   N   KP  P   G     P    P P   A P P   P
Sbjct: 1553 SVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGP--PHPLPDTPAP---ATPLPPVPP 1607

Query: 214  TAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAG 273
             A  A PP  +S        +S  +   Q A    PG  H P PPAP      A  + A 
Sbjct: 1608 PAVAAAPPTLDSTASSLTSYDSEVATLTQGAS-AAPGDPHPPGPPAP------AAPAPAA 1660

Query: 274  RRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGE 333
             +P P +P    +SG   V        R+ S  P  T  +             GGG  G 
Sbjct: 1661 PQPGP-DPPPGTDSGIEEVD------SRSSSDHPLETISSAST---LSSLSAEGGGSAGG 1710

Query: 334  GTHATHGPASPPG--RRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGR- 390
            G  A  G AS P     +   +        S  G     QL  P +    AL   GG R 
Sbjct: 1711 GGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKLRGRALGASGGLRP 1770

Query: 391  ----NLKSNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAGI 429
                 L+     T+ T   +GA    ++A      S PPTAG+
Sbjct: 1771 GPSGGLRDPVTPTSPTVSVTGAGTDGLLA--LRACSGPPTAGV 1811



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 80/298 (26%), Positives = 107/298 (35%), Gaps = 73/298 (24%)

Query: 139  LFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQP 198
            L LR K + A   + P   PP ++       F R     G++  PP    S    P S P
Sbjct: 884  LMLRQKSIGAAEDDRPYLAPPAMK-------FSRSLSVPGSEDIPPPPTTSPPEPPYSTP 936

Query: 199  PLPQETA--APAPQPGPTAP------PARPPA-YESREGPRGRAESRG-----SGPAQPA 244
            P+P  +    P+P+ GP  P      PA  PA ++    P  R  SR      SGP  PA
Sbjct: 937  PVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPA 996

Query: 245  ----------HLPLPGP----AHSPAP-------------------PAPELR--EGRAPG 269
                      H P P P    AH P P                   P P LR   G  P 
Sbjct: 997  HHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPS 1056

Query: 270  STAGRRPRPREPQAAEESGCATVG--LRRGDC-DRAGSS--QPPATSGNGERCRFCRRRR 324
             T G  P P    +A   G ++ G  LR      RA S+    PA SG G +    ++ +
Sbjct: 1057 PTPG-APSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTK 1115

Query: 325  RRGGGGEGEGTHATHGPASP-----------PGRRHDEEVGAAVLRAGSGEGSRRGLQ 371
              G   +G G      P SP           P  ++   +   +++A S   S R  Q
Sbjct: 1116 VEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQ 1173



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 77/300 (25%), Positives = 99/300 (33%), Gaps = 77/300 (25%)

Query: 102  RATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPR-PPPN 160
            R   P P PG   P H  + G   G+SQ               G      +LPPR     
Sbjct: 1051 RGGGPSPTPGAPSPSHHGSAGGGGGSSQ---------------GPALRYFQLPPRAASAA 1095

Query: 161  LQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR- 219
            +    +    ++ P+    K     Q+G  GG P +  P P   A+P P P   AP  + 
Sbjct: 1096 MYVPARSGRGRKGPLVKQTKVEGEPQKG--GGLPPA--PSPTSPASPQPPPAVAAPSEKN 1151

Query: 220  -----------PPAYESREGPRGRAESRGSGPAQP---------AHLPLPGPAHSPAPPA 259
                       P    S    +G + +    P QP            P P PA SP PP+
Sbjct: 1152 SIPIPTIIIKAPSTSSSGRSSQG-SSTEAEPPTQPEPTGGGGGGGSSPSPAPAMSPVPPS 1210

Query: 260  PELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRF 319
            P      +P  T      P       + G A VG  R    R G  Q  A          
Sbjct: 1211 P------SPVPTPASPSGPATLDFTSQFGAALVGAAR----REGGWQNEA---------- 1250

Query: 320  CRRRRR---------RGGGGEGEGTHATHGPASPPGRRHDEEVGAA-----VLRAGSGEG 365
             RRR             GG  G GT A  GP     +  DE + +A     +  AGSG G
Sbjct: 1251 -RRRSTLFLSTDAGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAG 1309



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 55/213 (25%), Positives = 69/213 (32%), Gaps = 49/213 (23%)

Query: 114  HPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP 173
            HP   K   P+   S LG     R   L+         + PPRPP    E          
Sbjct: 1340 HPLTGKALDPA---SPLGLALAARERALKESSEGGGAPQPPPRPPSPRYEAPPPTPHHHS 1396

Query: 174  P---------VYLGNKPTPPRQE----GSFGGRPKSQPPLP--------QETAAPAPQPG 212
            P         ++  + P P R+E       G + KS P  P              AP  G
Sbjct: 1397 PHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVG 1456

Query: 213  P------TAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGR 266
            P      T PPA  P              R + P +P  LPL         P   +  GR
Sbjct: 1457 PLLLQLGTEPPAPHPGVSK--------PWRSAAPEEPERLPLHVRFLENCQPRAPVTSGR 1508

Query: 267  APGSTAG--------RR---PRPREPQAAEESG 288
             P S  G        RR   P P  P+A+EE+G
Sbjct: 1509 GPPSEDGPGVPPPSPRRSVPPSPTSPRASEENG 1541


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 78/296 (26%), Positives = 100/296 (33%), Gaps = 42/296 (14%)

Query: 88   PVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLC 147
            P  P  KG+ P+   ATPP P  G   P  +    P A T    K           KG  
Sbjct: 1071 PATPSLKGA-PTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATP---PHKGAP 1126

Query: 148  ALLLELPPRPPPNL----QEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQ- 202
                  PP P   L     +G        PP   G   TPP +       P + PP P+ 
Sbjct: 1127 TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAP--TTPAATPPSPKG 1184

Query: 203  ETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPEL 262
              A P+P+  PT P A PP   S +G       +G+ P  PA  P P P    A P+P+ 
Sbjct: 1185 GLATPSPKGAPTTPAATPP---SPKGGLATPSPKGA-PTTPAATP-PSPKGGLATPSPK- 1238

Query: 263  REGRAPGSTAGRRPRPR-EPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCR 321
                AP + A   P P+  P      G  T         + G + PP             
Sbjct: 1239 ---GAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPP------------- 1282

Query: 322  RRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPR 377
                     +G    A   P SP G         A     +   S +G   TPPP+
Sbjct: 1283 --------HKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330



 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 69/250 (27%), Positives = 88/250 (35%), Gaps = 45/250 (18%)

Query: 91   PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALL 150
            P  KG+ P+   ATPP P  G   P  +    P A T    K           KG     
Sbjct: 1235 PSPKGA-PTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPH---KGAPNPA 1290

Query: 151  LELPPRPPPNLQEGGQRAIFQRPPVYLGNKP--TPPRQEGSFGGRPKSQPPLPQETAAPA 208
            +  PP P     +GG       PP      P  TPP  +GS G  P    P P     P+
Sbjct: 1291 VVTPPSP-----KGGPAT---SPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPS 1342

Query: 209  PQPGPTAPPARPPAYESREGPRGRAESRGSGP--AQPAH-----LPLPGPAHSPAPPAPE 261
            P+  PT P   P    S+ GP   +   G  P  A P+H     +  P P   PA P+P+
Sbjct: 1343 PKGTPTLPATTP---SSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPK 1399

Query: 262  ----------LREGRAPGSTAGRRPRPREPQAAEESGCAT------VGLRRGDCDRAGSS 305
                      L   +AP +     P  RE  A    G  T      V L++     A   
Sbjct: 1400 GDPTSPAVIPLSPKKAPAT-----PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG 1454

Query: 306  QPPATSGNGE 315
             P   S  G+
Sbjct: 1455 GPATPSSKGD 1464



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 62/239 (25%), Positives = 83/239 (34%), Gaps = 29/239 (12%)

Query: 87   APVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGL 146
            AP+ P A    P  G ATP  PH G           P  G +               KG 
Sbjct: 1102 APMPPAATPPSPKGGLATP--PHKGAPTTPAATPPSPKGGLAT-----------PPPKGA 1148

Query: 147  CALLLELPPRPPPNL----QEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQ 202
                   PP P   L     +G        PP   G   TP  +       P + PP P+
Sbjct: 1149 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP--TTPAATPPSPK 1206

Query: 203  -ETAAPAPQPGPTAPPARPPAYE---SREGPRGRAESRGSGPAQPAHLP-LPGPAHSPAP 257
               A P+P+  PT P A PP+ +   +   P+G   +  + P  P   P  P P  +P P
Sbjct: 1207 GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTP 1266

Query: 258  PA---PELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGN 313
            PA   P L+ G A     G  P P         G       +G      ++ PP+  G+
Sbjct: 1267 PAATPPSLKGGLATPPHKG-APNPAVVTPPSPKGGPATSPPKG-APTPPAATPPSPKGS 1323



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 72/300 (24%), Positives = 99/300 (33%), Gaps = 71/300 (23%)

Query: 88   PVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLC 147
            P  P  KG+ P+   ATPP P  G   P  +    P A T                    
Sbjct: 931  PASPSPKGA-PTPPAATPPSPKGGPATPSPKWAPTPPAAT-------------------- 969

Query: 148  ALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQE-TAA 206
                  PP P     +GG               P  P  +G+    P + PP P+   A 
Sbjct: 970  ------PPSP-----KGG---------------PATPSPKGA-PTPPAATPPSPKGGPAT 1002

Query: 207  PAPQPGPTAPPARPPAYESREG----PRGRAESRGSGP----AQPAHLPLP-GPAHSPAP 257
            P+P+  PT P   PP+ +        P+G +    + P      PA  PLP G   +PA 
Sbjct: 1003 PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA 1062

Query: 258  PAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERC 317
              P  + G A  S  G    P     + + G AT   +       G+  PPA +    + 
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPK-------GAPMPPAATPPSPKG 1115

Query: 318  RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPR 377
                   +      G  T     P SP G         A     +   S +G   TPPP+
Sbjct: 1116 GLATPPHK------GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 65/255 (25%), Positives = 86/255 (33%), Gaps = 37/255 (14%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPS-----EGRATPPLPHPGDHHPRHRKNRGPS 124
            P + G  G     G+L +PV PV    +P      +G    P        P  +    PS
Sbjct: 809  PTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPS 868

Query: 125  AGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNL---QEGGQRAIFQRPPVYLGNKP 181
            A T             L  KG+     E P     NL   +EG      ++ P       
Sbjct: 869  AVTP------------LSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSS 916

Query: 182  TPPRQEGSFGGRPKSQPPLPQETAAPAPQ----PGPTAPPARPPAYESREGPRGRAESRG 237
            +P +   +    PK  P  P    AP P     P P   PA P    +   P     S  
Sbjct: 917  SPKKARAT--PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPK 974

Query: 238  SGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPR-EPQAAEESGCATVGLRR 296
             GPA P+    P P   PA   P  + G A  S  G    P   P + + S  AT   + 
Sbjct: 975  GGPATPSPKGAPTP---PAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPK- 1030

Query: 297  GDCDRAGSSQPPATS 311
                  G+S PPA +
Sbjct: 1031 ------GASTPPAAT 1039



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 79/316 (25%), Positives = 100/316 (31%), Gaps = 54/316 (17%)

Query: 87   APVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGL 146
            AP  P A    P  G ATPP        P+       +   S  G            KG 
Sbjct: 1148 APTTPAATPPSPKGGLATPP--------PKGAPTTPAATPPSPKGGLAT-----PSPKGA 1194

Query: 147  CALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFG-GRPKSQPPLPQETA 205
                   PP P   L     +     P        TPP  +G      PK  P  P  T 
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAA------TPPSPKGGLATPSPKGAPTTPAAT- 1247

Query: 206  APAPQPGPTAPPAR----PPAYESREGPRGRAESRGSGPAQPAHL----PLPGPAHSP-- 255
             P+P+ GP  PP +    PPA        G A     G   PA +    P  GPA SP  
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307

Query: 256  --------APPAPELREGRAPGSTAGRRP--RPREPQAAEESGCATVGLRRG---DCDRA 302
                     PP+P+   G  P   A   P   P  P+        T   + G      + 
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKE 1367

Query: 303  GSSQPPATSGNGERCRFCRRRRRRG---GGGEGEGTHATHGPASPPGRRHDEEVGAAVLR 359
            G + P AT  +           +RG      +G+ T     P SP      +     V R
Sbjct: 1368 GPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSP-----KKAPATPVTR 1422

Query: 360  AGSGEGSRRGLQLTPP 375
             G+   S+    LTPP
Sbjct: 1423 EGAATPSKG--DLTPP 1436



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 11/109 (10%)

Query: 194  PKSQPPLPQETAAPAPQPGPTA--PPA-RPPAYESREGPRG-------RAESRGSGPAQP 243
            PK  P +P    APA      A  PPA  P  Y+    P+         + S    P  P
Sbjct: 1558 PKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPP 1617

Query: 244  AHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATV 292
            A  P P P   PA PAP+      P + +  +  P  P +      ATV
Sbjct: 1618 AVTP-PSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATV 1665



 Score = 32.7 bits (73), Expect = 0.71
 Identities = 44/185 (23%), Positives = 62/185 (33%), Gaps = 31/185 (16%)

Query: 87   APVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGL 146
            AP  P    S P E  ATP               R P A T+ L  K    +L  +   +
Sbjct: 1502 APTLPAVIPSSPKEVPATPS------------SRRDPIAPTATLLSKKTPATLAPKEALI 1549

Query: 147  CALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPL-PQETA 205
               +    P+  P +    +      P     + P P     ++ G P  +  L P    
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPA--TPSSKEASSP-PAVTPSTYKGAPSPKELLIPPAVT 1606

Query: 206  APAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREG 265
            +P+P+  PT P   PP+ E              GPA PA  P   P   P  P+      
Sbjct: 1607 SPSPKEAPTPPAVTPPSPE-------------KGPATPA--PKGTPTSPPVTPSSLKDSP 1651

Query: 266  RAPGS 270
             +P S
Sbjct: 1652 TSPAS 1656



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 54/221 (24%), Positives = 76/221 (34%), Gaps = 28/221 (12%)

Query: 96   SVPSEGRATPPLPHPGDHH--PRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLEL 153
            +VPS  + TP +P P +    P  ++   P A T    K        L    + +   + 
Sbjct: 1554 TVPSP-KKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKE 1612

Query: 154  PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ--- 210
             P PP       ++      P   G   +PP    S    P S   +  +  A  PQ   
Sbjct: 1613 APTPPAVTPPSPEKG--PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASK 1670

Query: 211  -----PGPTA--PPARPPAYES--------REGPRGRAESRGSGPAQP---AHLPLPGPA 252
                  GPTA       PA ES        R+GP+ +  S  S P  P   A     GP 
Sbjct: 1671 GLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPL 1730

Query: 253  H--SPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCAT 291
               +PAP  P  ++             P+ P A  ES  +T
Sbjct: 1731 STVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKAST 1771



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 6/93 (6%)

Query: 181  PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP 240
            P  P  +G     P   PP P+E  AP  Q   ++ P + PA      P G        P
Sbjct: 1456 PATPSSKGD-PTLPAVTPPSPKEPPAP-KQVATSSSPKKAPA---TPAPMGAPTLPAVIP 1510

Query: 241  AQPAHLP-LPGPAHSPAPPAPELREGRAPGSTA 272
            + P  +P  P     P  P   L   + P + A
Sbjct: 1511 SSPKEVPATPSSRRDPIAPTATLLSKKTPATLA 1543



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 11/84 (13%)

Query: 205  AAPAPQPGPTAPPARPPAYESREGPRGRAESRG--SGPAQPAHLPLP--------GPAHS 254
            A P+ +  PT P   PP+ +    P+  A S      PA PA +  P         P   
Sbjct: 1457 ATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEV 1516

Query: 255  PAPPAPELREGRAPGSTAGRRPRP 278
            PA P+   R+  AP +T   +  P
Sbjct: 1517 PATPSSR-RDPIAPTATLLSKKTP 1539


>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
          Length = 1073

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 65/221 (29%), Positives = 82/221 (37%), Gaps = 24/221 (10%)

Query: 152 ELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQP 211
           E  P  PP L   G  ++F          P  P ++G  G   K  P LP E      +P
Sbjct: 323 EAGPAGPPGLP--GTTSLFTP-------HPRMPGEQGPKG--EKGDPGLPGEPGLQG-RP 370

Query: 212 GPTAP--PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSP-APPAPELREGRAP 268
           G   P  P  PP  + +EG  G   + G+ P  P H+  PGP+  P +  AP LR     
Sbjct: 371 GELGPQGPTGPPGAKGQEGAHGAPGAAGN-PGAPGHVGAPGPSGPPGSVGAPGLR----- 424

Query: 269 GSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGG 328
             T G+     E  AA E G       RGD    G   PP    +GE     R      G
Sbjct: 425 -GTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGE--PGLRGSPGLPG 481

Query: 329 GGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRG 369
               +G     G    PG R D  +G A     SG    +G
Sbjct: 482 PLGTKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKG 522



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 50/181 (27%), Positives = 64/181 (35%), Gaps = 28/181 (15%)

Query: 170 FQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--PAYESRE 227
           F  PP   GN P PP  +G  G    + PP  Q +      PGP  P   P  P  E +E
Sbjct: 640 FMGPP---GN-PGPPGADGIAGA---AGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKE 692

Query: 228 GPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEES 287
           G  G+       P  P     PG A  P  P PE    R P    G       P    ES
Sbjct: 693 GRDGK-------PGPPGE---PGKAGEPGLPGPE--GARGPPGFKGHTGDSGAPGPRGES 740

Query: 288 GCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR 347
           G   +  + G   + G + P    G        +  R   G     G+    GP+  PG+
Sbjct: 741 GAMGLPGQEGLPGKDGDTGPTGPQGP-------QGPRGPPGKNGSPGSPGEPGPSGTPGQ 793

Query: 348 R 348
           +
Sbjct: 794 K 794



 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 47/165 (28%), Positives = 54/165 (32%), Gaps = 21/165 (12%)

Query: 184 PRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--PAYESREGPRGRAESRGSGPA 241
           P QEG  G    + P  PQ    P   PG    P  P  P      G +G     GS P 
Sbjct: 746 PGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGS-PG 804

Query: 242 QPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDR 301
            P  L   GP   P       +EG  PG       +P EP    E         RGD   
Sbjct: 805 LPGFLGPRGPPGEPGEKGVPGKEG-VPG-------KPGEPGFKGE---------RGDPGI 847

Query: 302 AGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG 346
            G   PP   G          +   G  G  +G    +GP  PPG
Sbjct: 848 KGDKGPPGGKGQPGDPGIPGHKGHTGLMGP-QGLPGENGPVGPPG 891



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 9/129 (6%)

Query: 158 PPNLQEGGQRAIFQRPPVYLGNKPTP--PRQEGSFGGRPKSQPPLPQETAAPAPQPGPTA 215
           PP +Q    +   + PP   G    P  P +EG  G   K  PP     A     PGP  
Sbjct: 661 PPGIQGSPGK---EGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEG 717

Query: 216 PPARPPAYESREGPRGRAESRGSGPAQ--PAHLPLPGPAHSPAPPAPELREG-RAPGSTA 272
               PP ++   G  G    RG   A   P    LPG      P  P+  +G R P    
Sbjct: 718 ARG-PPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKN 776

Query: 273 GRRPRPREP 281
           G    P EP
Sbjct: 777 GSPGSPGEP 785



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 50/201 (24%), Positives = 66/201 (32%), Gaps = 37/201 (18%)

Query: 185 RQEGSFGGRPKSQPPLPQETAAPAP-QPGPTAPPARP--PAYESREGPRG---------- 231
           R E    G+P  +  + ++  A  P + G    P  P  P     +G +G          
Sbjct: 255 RGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGL 314

Query: 232 ---RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESG 288
              R E   +GPA P  LP      +P P        R PG   G +    +P    E G
Sbjct: 315 KGDRGEKGEAGPAGPPGLPGTTSLFTPHP--------RMPGE-QGPKGEKGDPGLPGEPG 365

Query: 289 CATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRR 348
                 R G+    G + PP   G               G     G     GP+ PPG  
Sbjct: 366 LQG---RPGELGPQGPTGPPGAKGQ----EGAHGAPGAAGNPGAPGHVGAPGPSGPPG-- 416

Query: 349 HDEEVGAAVLRAGSGEGSRRG 369
               VGA  LR   G+   RG
Sbjct: 417 ---SVGAPGLRGTPGKDGERG 434



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 94/376 (25%), Positives = 118/376 (31%), Gaps = 91/376 (24%)

Query: 72  RSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLG 131
           R G+ G+    G   AP FP  +G    +G     L  PG    R  K     AG   L 
Sbjct: 278 RPGEKGEAGLPG---APGFPGVRGEKGDQGEKGE-LGLPGLKGDRGEKGEAGPAGPPGLP 333

Query: 132 KKTQCRSLFLRTKGLCALLLELPPRPPPNLQEG-----GQRAIFQRPPVYLGNKPTPPR- 185
             T   SLF            +P    P  ++G     G+  +  RP       PT P  
Sbjct: 334 GTT---SLFTPHP-------RMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPG 383

Query: 186 ---QEGSFGGRPKS-QPPLPQETAAPAPQ--PGPTAPPAR--PPAYESREGPRGRAESRG 237
              QEG+ G    +  P  P    AP P   PG    P     P  +   G +G A   G
Sbjct: 384 AKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEG 443

Query: 238 S-GPAQPAHLP----LPGPAHSPAPPAPELREGRA---PGSTAGRRPRPREPQAAEESGC 289
           S GP  P   P    LPGP        P LR       P  T G R  P  P +    G 
Sbjct: 444 SPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGD 503

Query: 290 ATVGLRRGDCDRAGSSQPPATSGN-GER-------------------------------- 316
             +G+        G S PP   G+ G R                                
Sbjct: 504 PGIGV----AGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKD 559

Query: 317 -CRFCRR-----------RRRRGGGGEG--EGTHATHGPASPPGRRHDEEV----GAAVL 358
            C  C             +  +G  G+   EGT    G A PPG      +    G+   
Sbjct: 560 VCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGE 619

Query: 359 RAGSGEGSRRGLQLTP 374
           R   GE  ++G Q  P
Sbjct: 620 RGADGEVGQKGDQGHP 635


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 39/109 (35%), Positives = 41/109 (37%), Gaps = 5/109 (4%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ--P 211
           PP PPP L  G        PP   G     P    S        PPLP+    P+P   P
Sbjct: 605 PPPPPPPLPGG---VCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLP 661

Query: 212 GPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAP 260
           G TA P  PP   S   P       GS    P   PLPG A  P PP P
Sbjct: 662 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPP 710



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 43/125 (34%), Positives = 46/125 (36%), Gaps = 21/125 (16%)

Query: 157 PPPNLQEG----------GQRAIFQRPPVYLGNK--PTPPRQEGSFGGRPKSQPPLPQET 204
           PPP L EG          G  AI   PP+    +  P PP   GS  G P   PPLP E 
Sbjct: 644 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGS-AGIPPPPPPLPGEA 702

Query: 205 AAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPA-HLPLPGPAHSPAPPAPELR 263
             P P P     P  PP      GP       G  P  P   +P P P     P AP L 
Sbjct: 703 GMPPPPPPLPGGPGIPPPPPFPGGP-------GIPPPPPGMGMPPPPPFGFGVPAAPVLP 755

Query: 264 EGRAP 268
            G  P
Sbjct: 756 FGLTP 760



 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 44/144 (30%), Positives = 48/144 (33%), Gaps = 26/144 (18%)

Query: 153 LPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ-- 210
           +PP PP      G       PP   G+  TPP         P   PPLP      +P   
Sbjct: 573 VPPAPPLP----GDSGTIIPPPPAPGDSTTPPPPPPP----PPPPPPLPGGVCISSPPSL 624

Query: 211 PGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHL----------PLPGPAHSPAPPAP 260
           PG TA    PP       P       G G   P+ L          PLPG A  P PP P
Sbjct: 625 PGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 684

Query: 261 ELREGRAPGSTAGRRPRPREPQAA 284
                  PGS     P P  P  A
Sbjct: 685 ------LPGSAGIPPPPPPLPGEA 702



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 36/114 (31%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 173 PPVYLGNKPTPPRQE-GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRG 231
           PP      P PP        G     PP P ++  P P P P  PP   P       P  
Sbjct: 564 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSP-- 621

Query: 232 RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREG-------RAPGSTAGRRPRP 278
              S   G A     PL G A    PP P L EG         PG TA   P P
Sbjct: 622 --PSLPGGTAISPPPPLSGDA--TIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 671


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 39/109 (35%), Positives = 41/109 (37%), Gaps = 5/109 (4%)

Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ--P 211
           PP PPP L  G        PP   G     P    S        PPLP+    P+P   P
Sbjct: 614 PPPPPPPLPGG---VCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLP 670

Query: 212 GPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAP 260
           G TA P  PP   S   P       GS    P   PLPG A  P PP P
Sbjct: 671 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPP 719



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 43/125 (34%), Positives = 46/125 (36%), Gaps = 21/125 (16%)

Query: 157 PPPNLQEG----------GQRAIFQRPPVYLGNK--PTPPRQEGSFGGRPKSQPPLPQET 204
           PPP L EG          G  AI   PP+    +  P PP   GS  G P   PPLP E 
Sbjct: 653 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGS-AGIPPPPPPLPGEA 711

Query: 205 AAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPA-HLPLPGPAHSPAPPAPELR 263
             P P P     P  PP      GP       G  P  P   +P P P     P AP L 
Sbjct: 712 GMPPPPPPLPGGPGIPPPPPFPGGP-------GIPPPPPGMGMPPPPPFGFGVPAAPVLP 764

Query: 264 EGRAP 268
            G  P
Sbjct: 765 FGLTP 769



 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 44/144 (30%), Positives = 48/144 (33%), Gaps = 26/144 (18%)

Query: 153 LPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ-- 210
           +PP PP      G       PP   G+  TPP         P   PPLP      +P   
Sbjct: 582 VPPAPPLP----GDSGTIIPPPPAPGDSTTPPPPPPP----PPPPPPLPGGVCISSPPSL 633

Query: 211 PGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHL----------PLPGPAHSPAPPAP 260
           PG TA    PP       P       G G   P+ L          PLPG A  P PP P
Sbjct: 634 PGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 693

Query: 261 ELREGRAPGSTAGRRPRPREPQAA 284
                  PGS     P P  P  A
Sbjct: 694 ------LPGSAGIPPPPPPLPGEA 711



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 36/114 (31%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 173 PPVYLGNKPTPPRQE-GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRG 231
           PP      P PP        G     PP P ++  P P P P  PP   P       P  
Sbjct: 573 PPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSP-- 630

Query: 232 RAESRGSGPAQPAHLPLPGPAHSPAPPAPELREG-------RAPGSTAGRRPRP 278
              S   G A     PL G A    PP P L EG         PG TA   P P
Sbjct: 631 --PSLPGGTAISPPPPLSGDA--TIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 680


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 63/232 (27%), Positives = 79/232 (34%), Gaps = 31/232 (13%)

Query: 91  PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKT-QCRSLFLRTKGL--- 146
           P  +GS P  G   P  P PG   P    NRG + G   + +      S F     L   
Sbjct: 198 PHNRGSPPVPGG--PRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT 255

Query: 147 -CALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETA 205
               L + PP PPP         +  RP ++    P PP Q          +P    +  
Sbjct: 256 PSRALDDKPPPPPP--------PVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP 307

Query: 206 APAPQPGPTAPPARPPAYESR-EGPRGRAESRGSGPAQPAHLPLPGPAHS-PAPPAPELR 263
            P P P    PP  PP+     E PR    +     + P   PLP P  S P PP P  R
Sbjct: 308 PPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTP---PLPSPGRSGPLPPPPSER 364

Query: 264 EGRAPGSTAGRR-PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNG 314
                    GR  P P  P  +          R G   RA  + P   S +G
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVS----------RNGSTSRALPATPQLPSRSG 406



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 93/389 (23%), Positives = 121/389 (31%), Gaps = 100/389 (25%)

Query: 70  PKRSGDMGKYHAHGHLRAPVFPV------AKGSVPSEGRATPPLPHPGDHH--PRHRKNR 121
           PK      + +  G  R P+ P       AK   P  G    P+P PG     P  ++NR
Sbjct: 109 PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNR 168

Query: 122 GPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKP 181
            P                              PPRP     + G +     PPV     P
Sbjct: 169 MP------------------------------PPRP-----DVGSKPDSIPPPV-----P 188

Query: 182 TPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPA 241
           + PR   S     +  PP+P     P+P  GPT PP          G RG A   GS   
Sbjct: 189 STPRPIQS-SPHNRGSPPVPGGPRQPSP--GPTPPPF--------PGNRGTALGGGSIRQ 237

Query: 242 QPAHLPLPGPAHSPAPPAPELR---EGRAPGSTAGRRP---------------RPREPQA 283
            P     P     P PP P      +   P    G RP               +P  P  
Sbjct: 238 SPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST 297

Query: 284 AEESGCATVGLRRGDCDRAGSSQ-PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPA 342
              S  +          R G    PP++SGN E  R  +R            +    GP 
Sbjct: 298 PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357

Query: 343 SPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRT 402
            PP      E     +R   G   R G    PPP   +G+  R            +T + 
Sbjct: 358 PPP----PSERPPPPVRDPPG---RSGPLPPPPPVSRNGSTSR---------ALPATPQL 401

Query: 403 PRRSGASGPK------MVADQTSGISRPP 425
           P RSG   P+      +  D+ S  + PP
Sbjct: 402 PSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 57/208 (27%), Positives = 71/208 (34%), Gaps = 58/208 (27%)

Query: 86  RAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKG 145
           + P  P   G+ PS  R   P P P ++ P       PSA +                  
Sbjct: 263 KPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASS------------------ 304

Query: 146 LCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP--PRQEGSFG---------GRP 194
                 + PP PPP  + G        PP   GN  TP  P++  S           GR 
Sbjct: 305 ------QAPPPPPPPSRPGPPPL----PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354

Query: 195 KSQPPLPQETAAPAPQPGP-TAPPARPPAYESREGPRGRA-------------ESRGSGP 240
              PP P E   P  +  P  + P  PP   SR G   RA             +S  SGP
Sbjct: 355 GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP 414

Query: 241 AQPAHLPLPGP---AHSPAPPAPELREG 265
             P  LP   P   A  P PP+  +R G
Sbjct: 415 RPP--LPPDRPSAGAPPPPPPSTSIRNG 440



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 47/202 (23%), Positives = 68/202 (33%), Gaps = 29/202 (14%)

Query: 191 GGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPG 250
           GG  ++  P  + TA      G + PP  PP      G R  +    S P+ P   P+P 
Sbjct: 101 GGLFQAGMPKLRSTANRDNDSGGSRPPLLPP------GGRSTSAKPFSPPSGPGRFPVPS 154

Query: 251 PAHSPAPPAPELREGRAPGSTAGRRPR------PREPQAAEES--GCATVGLRRGDCDRA 302
           P H   PP P+      P    G +P       P  P+  + S     +  +  G    +
Sbjct: 155 PGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPS 214

Query: 303 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPAS-------PPGRRHDEEVGA 355
               PP   GN        R    GGG   +   ++  P S        P R  D++   
Sbjct: 215 PGPTPPPFPGN--------RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266

Query: 356 AVLRAGSGEGSRRGLQLTPPPR 377
                G+     R     PPP+
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQ 288


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 63/232 (27%), Positives = 79/232 (34%), Gaps = 31/232 (13%)

Query: 91  PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKT-QCRSLFLRTKGL--- 146
           P  +GS P  G   P  P PG   P    NRG + G   + +      S F     L   
Sbjct: 198 PHNRGSPPVPGG--PRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT 255

Query: 147 -CALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETA 205
               L + PP PPP         +  RP ++    P PP Q          +P    +  
Sbjct: 256 PSRALDDKPPPPPP--------PVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP 307

Query: 206 APAPQPGPTAPPARPPAYESR-EGPRGRAESRGSGPAQPAHLPLPGPAHS-PAPPAPELR 263
            P P P    PP  PP+     E PR    +     + P   PLP P  S P PP P  R
Sbjct: 308 PPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTP---PLPSPGRSGPLPPPPSER 364

Query: 264 EGRAPGSTAGRR-PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNG 314
                    GR  P P  P  +          R G   RA  + P   S +G
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVS----------RNGSTSRALPATPQLPSRSG 406



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 93/389 (23%), Positives = 121/389 (31%), Gaps = 100/389 (25%)

Query: 70  PKRSGDMGKYHAHGHLRAPVFPV------AKGSVPSEGRATPPLPHPGDHH--PRHRKNR 121
           PK      + +  G  R P+ P       AK   P  G    P+P PG     P  ++NR
Sbjct: 109 PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNR 168

Query: 122 GPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKP 181
            P                              PPRP     + G +     PPV     P
Sbjct: 169 MP------------------------------PPRP-----DVGSKPDSIPPPV-----P 188

Query: 182 TPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPA 241
           + PR   S     +  PP+P     P+P  GPT PP          G RG A   GS   
Sbjct: 189 STPRPIQS-SPHNRGSPPVPGGPRQPSP--GPTPPPF--------PGNRGTALGGGSIRQ 237

Query: 242 QPAHLPLPGPAHSPAPPAPELR---EGRAPGSTAGRRP---------------RPREPQA 283
            P     P     P PP P      +   P    G RP               +P  P  
Sbjct: 238 SPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST 297

Query: 284 AEESGCATVGLRRGDCDRAGSSQ-PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPA 342
              S  +          R G    PP++SGN E  R  +R            +    GP 
Sbjct: 298 PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357

Query: 343 SPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRT 402
            PP      E     +R   G   R G    PPP   +G+  R            +T + 
Sbjct: 358 PPP----PSERPPPPVRDPPG---RSGPLPPPPPVSRNGSTSR---------ALPATPQL 401

Query: 403 PRRSGASGPK------MVADQTSGISRPP 425
           P RSG   P+      +  D+ S  + PP
Sbjct: 402 PSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 57/208 (27%), Positives = 71/208 (34%), Gaps = 58/208 (27%)

Query: 86  RAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKG 145
           + P  P   G+ PS  R   P P P ++ P       PSA +                  
Sbjct: 263 KPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASS------------------ 304

Query: 146 LCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP--PRQEGSFG---------GRP 194
                 + PP PPP  + G        PP   GN  TP  P++  S           GR 
Sbjct: 305 ------QAPPPPPPPSRPGPPPL----PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354

Query: 195 KSQPPLPQETAAPAPQPGP-TAPPARPPAYESREGPRGRA-------------ESRGSGP 240
              PP P E   P  +  P  + P  PP   SR G   RA             +S  SGP
Sbjct: 355 GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP 414

Query: 241 AQPAHLPLPGP---AHSPAPPAPELREG 265
             P  LP   P   A  P PP+  +R G
Sbjct: 415 RPP--LPPDRPSAGAPPPPPPSTSIRNG 440



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 47/202 (23%), Positives = 68/202 (33%), Gaps = 29/202 (14%)

Query: 191 GGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPG 250
           GG  ++  P  + TA      G + PP  PP      G R  +    S P+ P   P+P 
Sbjct: 101 GGLFQAGMPKLRSTANRDNDSGGSRPPLLPP------GGRSTSAKPFSPPSGPGRFPVPS 154

Query: 251 PAHSPAPPAPELREGRAPGSTAGRRPR------PREPQAAEES--GCATVGLRRGDCDRA 302
           P H   PP P+      P    G +P       P  P+  + S     +  +  G    +
Sbjct: 155 PGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPS 214

Query: 303 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPAS-------PPGRRHDEEVGA 355
               PP   GN        R    GGG   +   ++  P S        P R  D++   
Sbjct: 215 PGPTPPPFPGN--------RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266

Query: 356 AVLRAGSGEGSRRGLQLTPPPR 377
                G+     R     PPP+
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQ 288


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 61/206 (29%), Positives = 78/206 (37%), Gaps = 29/206 (14%)

Query: 123 PSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPT 182
           PS G   LG++T       +  G  A     P   PP    G QR   Q PP  L  +P 
Sbjct: 437 PSPGALPLGRQTS-----QQPAGPPAQQRPPPQGGPPQPGPGPQR---QGPP--LQQRPP 486

Query: 183 PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSG--- 239
           P  Q+   G  P +  PLPQ   +P   P   A  A PP     +G + R  + G G   
Sbjct: 487 PQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPT--QGQGRQSRPVAGGPGAPP 544

Query: 240 ----PAQPAHLPLPGPAH-----SPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCA 290
               PA P+     GP       S + PAP    G  PG    + P  + P  A   G  
Sbjct: 545 AARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPA---GPT 601

Query: 291 TVGLRRGDCDRAG--SSQPPATSGNG 314
               + G   R G  ++Q P  SG G
Sbjct: 602 RQASQAGPVPRTGPPTTQQPRPSGPG 627



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 63/266 (23%), Positives = 89/266 (33%), Gaps = 65/266 (24%)

Query: 182 TPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP----PAYESREGPRGRAESRG 237
           TP       G +   QP  P     P PQ GP  P   P    P  + R  P+G+    G
Sbjct: 436 TPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSG 495

Query: 238 SGPAQPAHLP--LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLR 295
            GP   + LP  LP P  +P  PA    +   P    GR+ RP                 
Sbjct: 496 LGPPAGSPLPQRLPSPTSAPQQPA---SQAAPPTQGQGRQSRP----------------V 536

Query: 296 RGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPA------SPPGRRH 349
            G      +++PPA+             +R+ G  +     +  GPA      +PPG + 
Sbjct: 537 AGGPGAPPAARPPASPS----------PQRQAGPPQATRQTSVSGPAPPKASGAPPGGQ- 585

Query: 350 DEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGAS 409
            +  G      G    +R+  Q  P PR                     TT+ PR SG  
Sbjct: 586 -QRQGPPQKPPGPAGPTRQASQAGPVPR-----------------TGPPTTQQPRPSGPG 627

Query: 410 -----GPKMVADQTSGISRPPTAGIG 430
                 P++    +  +  P TA  G
Sbjct: 628 PAGRPKPQLAQKPSQDVPPPATAAAG 653



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 60/225 (26%), Positives = 83/225 (36%), Gaps = 39/225 (17%)

Query: 91  PVAKGSVPSEG----RATPPLPH-PGDHHPRHRKNRGPSAGT-----------------S 128
           P  +G  P  G    R  PPL   P     +H    GP AG+                 S
Sbjct: 461 PPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPAS 520

Query: 129 QLGKKTQCRSLFLR--TKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQ 186
           Q    TQ +    R    G  A     PP  P   ++ G     ++  V   + P PP+ 
Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV---SGPAPPKA 577

Query: 187 EGSFGGR-----PKSQPPLPQETAAPAPQPGP---TAPPARPPAYESREGPRGRAESR-G 237
            G+  G      P  +PP P      A Q GP   T PP       S  GP GR + +  
Sbjct: 578 SGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLA 637

Query: 238 SGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQ 282
             P+Q   +P P  A +  PP P+L + ++  + A   P P  P+
Sbjct: 638 QKPSQ--DVPPPATAAAGGPPHPQLNKSQSL-TNAFNLPEPAPPR 679



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 15/93 (16%)

Query: 209 PQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAP 268
           PQP P  P A  P   +  GP      R SG A         PA SPA P+P    G   
Sbjct: 28  PQPPPPPPGAHSPG--ATPGPGTATAERSSGVA---------PAASPAAPSPGSSGGGGF 76

Query: 269 GSTAGRRPRPREPQAA----EESGCATVGLRRG 297
            S+     +     AA    E+ G  + G  RG
Sbjct: 77  FSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRG 109


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 61/206 (29%), Positives = 78/206 (37%), Gaps = 29/206 (14%)

Query: 123 PSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPT 182
           PS G   LG++T       +  G  A     P   PP    G QR   Q PP  L  +P 
Sbjct: 437 PSPGALPLGRQTS-----QQPAGPPAQQRPPPQGGPPQPGPGPQR---QGPP--LQQRPP 486

Query: 183 PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSG--- 239
           P  Q+   G  P +  PLPQ   +P   P   A  A PP     +G + R  + G G   
Sbjct: 487 PQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPT--QGQGRQSRPVAGGPGAPP 544

Query: 240 ----PAQPAHLPLPGPAH-----SPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCA 290
               PA P+     GP       S + PAP    G  PG    + P  + P  A   G  
Sbjct: 545 AARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPA---GPT 601

Query: 291 TVGLRRGDCDRAG--SSQPPATSGNG 314
               + G   R G  ++Q P  SG G
Sbjct: 602 RQASQAGPVPRTGPPTTQQPRPSGPG 627



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 63/266 (23%), Positives = 89/266 (33%), Gaps = 65/266 (24%)

Query: 182 TPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP----PAYESREGPRGRAESRG 237
           TP       G +   QP  P     P PQ GP  P   P    P  + R  P+G+    G
Sbjct: 436 TPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSG 495

Query: 238 SGPAQPAHLP--LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLR 295
            GP   + LP  LP P  +P  PA    +   P    GR+ RP                 
Sbjct: 496 LGPPAGSPLPQRLPSPTSAPQQPA---SQAAPPTQGQGRQSRP----------------V 536

Query: 296 RGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPA------SPPGRRH 349
            G      +++PPA+             +R+ G  +     +  GPA      +PPG + 
Sbjct: 537 AGGPGAPPAARPPASPS----------PQRQAGPPQATRQTSVSGPAPPKASGAPPGGQ- 585

Query: 350 DEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGAS 409
            +  G      G    +R+  Q  P PR                     TT+ PR SG  
Sbjct: 586 -QRQGPPQKPPGPAGPTRQASQAGPVPR-----------------TGPPTTQQPRPSGPG 627

Query: 410 -----GPKMVADQTSGISRPPTAGIG 430
                 P++    +  +  P TA  G
Sbjct: 628 PAGRPKPQLAQKPSQDVPPPATAAAG 653



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 57/210 (27%), Positives = 76/210 (36%), Gaps = 38/210 (18%)

Query: 91  PVAKGSVPSEG----RATPPLPH-PGDHHPRHRKNRGPSAGT-----------------S 128
           P  +G  P  G    R  PPL   P     +H    GP AG+                 S
Sbjct: 461 PPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPAS 520

Query: 129 QLGKKTQCRSLFLR--TKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQ 186
           Q    TQ +    R    G  A     PP  P   ++ G     ++  V   + P PP+ 
Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV---SGPAPPKA 577

Query: 187 EGSFGGR-----PKSQPPLPQETAAPAPQPGP---TAPPARPPAYESREGPRGRAESR-G 237
            G+  G      P  +PP P      A Q GP   T PP       S  GP GR + +  
Sbjct: 578 SGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLA 637

Query: 238 SGPAQPAHLPLPGPAHSPAPPAPELREGRA 267
             P+Q   +P P  A +  PP P+L+   A
Sbjct: 638 QKPSQ--DVPPPATAAAGGPPHPQLKASPA 665



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 15/93 (16%)

Query: 209 PQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAP 268
           PQP P  P A  P   +  GP      R SG A         PA SPA P+P    G   
Sbjct: 28  PQPPPPPPGAHSPG--ATPGPGTATAERSSGVA---------PAASPAAPSPGSSGGGGF 76

Query: 269 GSTAGRRPRPREPQAA----EESGCATVGLRRG 297
            S+     +     AA    E+ G  + G  RG
Sbjct: 77  FSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRG 109


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
            sapiens]
          Length = 1636

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 55/163 (33%), Positives = 68/163 (41%), Gaps = 19/163 (11%)

Query: 154  PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAA-PAPQPG 212
            PP+ P  L          +P V    +P PP     + G   +Q PLP  + A P P PG
Sbjct: 985  PPQAPGLLPPQSPYPYAPQPGVL--GQPPPPLHTQLYPG--PAQDPLPAHSGALPFPSPG 1040

Query: 213  PTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHS-PAPPAPELREGRAPGST 271
            P  PP  P AY    GP     +R  GP Q A L + GP+ +  + P+P L    AP   
Sbjct: 1041 PPQPPHPPLAY----GPA--PSTRPMGP-QAAPLTIRGPSSAGQSTPSPHLVPSPAPSPG 1093

Query: 272  AGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNG 314
             G  P P  P AAE   C    LRRG       S  P +   G
Sbjct: 1094 PG--PVPPRPPAAEPPPC----LRRGAAAADLLSSSPESQHGG 1130



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 46/127 (36%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 173  PPVYLGNKPTP---PRQEGSFGGRPKSQP-PLPQETAAPAPQPGPTAPPARPPAYESREG 228
            P   +G +P P   P    +FG +P  QP PL      P   PG   PP  P  Y  + G
Sbjct: 947  PAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPG-LLPPQSPYPYAPQPG 1005

Query: 229  PRGRA-----ESRGSGPAQ---PAH---LPLPGPAHSPAPPAPELREGRAPGSTAGRRPR 277
              G+           GPAQ   PAH   LP P P   P PP P L  G AP +      R
Sbjct: 1006 VLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPG-PPQPPHPPLAYGPAPST------R 1058

Query: 278  PREPQAA 284
            P  PQAA
Sbjct: 1059 PMGPQAA 1065



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 41/153 (26%), Positives = 47/153 (30%), Gaps = 32/153 (20%)

Query: 153  LPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212
            LP  PPP          F  P + +  +P     +      P    P P  T AP P   
Sbjct: 860  LPSAPPPQ---------FSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCF 910

Query: 213  PTAPPAR-PPAYESREG---------------PRGRAESRGSGPAQPAHLPLPGPAHSPA 256
            P  PP   P  Y    G               P G    R     QP   P P  A  P 
Sbjct: 911  PVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQ 970

Query: 257  PPA-------PELREGRAPGSTAGRRPRPREPQ 282
            PP        P L   +APG    + P P  PQ
Sbjct: 971  PPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQ 1003



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 39/146 (26%), Positives = 48/146 (32%), Gaps = 33/146 (22%)

Query: 156  RPPPNLQEGGQRAIFQRP-PVYLG-------NKPTPPRQEGSFGGRPKSQP--------- 198
            +PPP L         Q P P + G         P PP    ++G  P ++P         
Sbjct: 1009 QPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLT 1068

Query: 199  -----------PLPQETAAPAPQPGPTAPPARPPAYES----REGPRGRAESRGSGPAQP 243
                       P P    +PAP PGP   P RPPA E     R G         S  +Q 
Sbjct: 1069 IRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1128

Query: 244  AHLPLPGPAHSPAPPAP-ELREGRAP 268
                 PG       P   +  EGR P
Sbjct: 1129 GGTQSPGGGQPLLQPTKVDAAEGRRP 1154



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 41/143 (28%), Positives = 45/143 (31%), Gaps = 29/143 (20%)

Query: 173 PPVYLGNKPTPPRQEGS----FGGRPKSQPPLPQETAA------------------PAPQ 210
           PP     KP  PR+E S     G  P+    LP +  A                  P+P 
Sbjct: 717 PPRPTAPKPLLPRREESEAVEAGDPPEELRSLPPDMVAGPRLPDTFLGSATPLHFPPSPF 776

Query: 211 PGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGS 270
           P  T P    P Y S   P G      SGP Q      PGP   P  P P L    A   
Sbjct: 777 PSSTGPG---PHYLSGPLPPGTY----SGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTP 829

Query: 271 TAGRRPRPREPQAAEESGCATVG 293
             G  PR         S    VG
Sbjct: 830 ELGLVPRSSPQHGVVSSPYVGVG 852



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 208  APQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLP-GPAHSPAPPAPELREGR 266
            A  PGP  PP  PPA      P        S    P   PLP  P     PP PE     
Sbjct: 1518 ASLPGPAEPPGLPPASLPESTP------IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSG 1571

Query: 267  APGST 271
             P S+
Sbjct: 1572 PPSSS 1576


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 88/329 (26%), Positives = 111/329 (33%), Gaps = 58/329 (17%)

Query: 70   PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPP-------LPH-PGDHHPRHRKNR 121
            P   G  G+    G    P  P  +G +  +G A  P       LP  PG   P  R  +
Sbjct: 761  PGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPG--FPGVRGEK 818

Query: 122  GPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKP 181
            G      +LG            KG      E  P  PP L   G  ++F          P
Sbjct: 819  GDQGEKGELGLPG--------LKGDRGEKGEAGPAGPPGLP--GTTSLFTP-------HP 861

Query: 182  TPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP--PARPPAYESREGPRGRAESRGSG 239
              P ++G  G   K  P LP E      +PG   P  P  PP  + +EG  G   + G+ 
Sbjct: 862  RMPGEQGPKG--EKGDPGLPGEPGLQG-RPGELGPQGPTGPPGAKGQEGAHGAPGAAGN- 917

Query: 240  PAQPAHLPLPGPAHSPAPP-APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGD 298
            P  P H+  PGP+  P    AP LR       T G+     E  AA E G       RGD
Sbjct: 918  PGAPGHVGAPGPSGPPGSVGAPGLR------GTPGKDGERGEKGAAGEEGSPGPVGPRGD 971

Query: 299  CDRAGSSQPPATSGNGE-----------------RCRFCRRRRRRGGGGE-GEGTHATHG 340
                G   PP    +GE                  C   R       GG+  +G     G
Sbjct: 972  PGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPG 1031

Query: 341  PASPPGRRHDEEVGAAVLRAGSGEGSRRG 369
                PG R D  +G A     SG    +G
Sbjct: 1032 IPGSPGSRGDPGIGVAGPPGPSGPPGDKG 1060



 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 95/364 (26%), Positives = 120/364 (32%), Gaps = 81/364 (22%)

Query: 74  GDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRK-NRGPSAGTSQLGK 132
           G+ G     GH  AP  P A+G +  EGR  P    PG    R +K + GP      LG 
Sbjct: 657 GEQGAPGPRGHQGAPGPPGARGPIGPEGRDGP----PGLQGLRGKKGDMGPPGIPGLLG- 711

Query: 133 KTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGG 192
                             L+ PP PP      G            G  P  P + G F G
Sbjct: 712 ------------------LQGPPGPPGVPGPPGP-----------GGSPGLPGEIG-FPG 741

Query: 193 RPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPA 252
           +P   PP P     P  + GP  PP  PP  +   G RG     G  P     +   G A
Sbjct: 742 KP--GPPGP---TGPPGKDGPNGPPG-PPGTKGEPGERGEDGLPGK-PGLRGEIGEQGLA 794

Query: 253 HSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLR--RGDCDRAGSSQPPAT 310
             P     E  E   PG+      R  +    E+      GL+  RG+   AG + PP  
Sbjct: 795 GRPG----EKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGL 850

Query: 311 SGNGERCRFCRRRRRRG-GGGEGE----------------GTHATHGPASPPGRRHDEEV 353
            G      F    R  G  G +GE                G     GP  PPG +  E  
Sbjct: 851 PGT--TSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQE-- 906

Query: 354 GAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKM 413
           GA      +G     G    P P    G++    G   L+        TP + G  G K 
Sbjct: 907 GAHGAPGAAGNPGAPGHVGAPGPSGPPGSV----GAPGLRG-------TPGKDGERGEKG 955

Query: 414 VADQ 417
            A +
Sbjct: 956 AAGE 959



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 50/181 (27%), Positives = 64/181 (35%), Gaps = 28/181 (15%)

Query: 170  FQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--PAYESRE 227
            F  PP   GN P PP  +G  G    + PP  Q +      PGP  P   P  P  E +E
Sbjct: 1193 FMGPP---GN-PGPPGADGIAGA---AGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKE 1245

Query: 228  GPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEES 287
            G  G+       P  P     PG A  P  P PE    R P    G       P    ES
Sbjct: 1246 GRDGK-------PGPPGE---PGKAGEPGLPGPE--GARGPPGFKGHTGDSGAPGPRGES 1293

Query: 288  GCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR 347
            G   +  + G   + G + P    G        +  R   G     G+    GP+  PG+
Sbjct: 1294 GAMGLPGQEGLPGKDGDTGPTGPQGP-------QGPRGPPGKNGSPGSPGEPGPSGTPGQ 1346

Query: 348  R 348
            +
Sbjct: 1347 K 1347



 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 47/165 (28%), Positives = 54/165 (32%), Gaps = 21/165 (12%)

Query: 184  PRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARP--PAYESREGPRGRAESRGSGPA 241
            P QEG  G    + P  PQ    P   PG    P  P  P      G +G     GS P 
Sbjct: 1299 PGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGS-PG 1357

Query: 242  QPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDR 301
             P  L   GP   P       +EG  PG       +P EP    E         RGD   
Sbjct: 1358 LPGFLGPRGPPGEPGEKGVPGKEG-VPG-------KPGEPGFKGE---------RGDPGI 1400

Query: 302  AGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG 346
             G   PP   G          +   G  G  +G    +GP  PPG
Sbjct: 1401 KGDKGPPGGKGQPGDPGIPGHKGHTGLMGP-QGLPGENGPVGPPG 1444



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 9/129 (6%)

Query: 158  PPNLQEGGQRAIFQRPPVYLGNKPTP--PRQEGSFGGRPKSQPPLPQETAAPAPQPGPTA 215
            PP +Q    +   + PP   G    P  P +EG  G   K  PP     A     PGP  
Sbjct: 1214 PPGIQGSPGK---EGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEG 1270

Query: 216  PPARPPAYESREGPRGRAESRGSGPAQ--PAHLPLPGPAHSPAPPAPELREG-RAPGSTA 272
                PP ++   G  G    RG   A   P    LPG      P  P+  +G R P    
Sbjct: 1271 ARG-PPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKN 1329

Query: 273  GRRPRPREP 281
            G    P EP
Sbjct: 1330 GSPGSPGEP 1338



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 62/228 (27%), Positives = 81/228 (35%), Gaps = 30/228 (13%)

Query: 158  PPNLQEGGQRAIFQRP--PVYLGNKPTPPRQEGS----FGGR-PKSQPPLPQETAAPAPQ 210
            PP   + G+  +   P  P  LG K    +  GS     GG+  K     P    +P  +
Sbjct: 980  PPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSR 1039

Query: 211  PGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGS 270
              P    A PP      G +G   SRG          LPG    P P  P  R+G APG+
Sbjct: 1040 GDPGIGVAGPPGPSGPPGDKGSPGSRG----------LPG---FPGPQGPAGRDG-APGN 1085

Query: 271  TAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGG 330
               R P P +P  +       + L   D     +  PP   G      F   +   G  G
Sbjct: 1086 PGERGP-PGKPGLSSLLSPGDINLLAKD---VCNDCPPGPPGLPGLPGFKGDKGVPGKPG 1141

Query: 331  EGEGTHATHGPASPPGRRHDEEV----GAAVLRAGSGEGSRRGLQLTP 374
              EGT    G A PPG      +    G+   R   GE  ++G Q  P
Sbjct: 1142 R-EGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHP 1188



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 50/194 (25%), Positives = 64/194 (32%), Gaps = 21/194 (10%)

Query: 190 FGGRP----KSQPPLPQETAAPAPQPG---PTAPPARPPAYESREGPRGRAESRGSGPAQ 242
           F G+P    +   P P   A P  + G   P  PP  P +   +EG +G        P  
Sbjct: 609 FPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQ----GAPGP 664

Query: 243 PAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRA 302
             H   PGP  +  P  PE R+G  P    G R +  +       G   +    G     
Sbjct: 665 RGHQGAPGPPGARGPIGPEGRDG--PPGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPGVP 722

Query: 303 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG-------RRHDEEVGA 355
           G   P  + G      F  +    G  G   G    +GP  PPG       R  D   G 
Sbjct: 723 GPPGPGGSPGLPGEIGFPGKPGPPGPTGP-PGKDGPNGPPGPPGTKGEPGERGEDGLPGK 781

Query: 356 AVLRAGSGEGSRRG 369
             LR   GE    G
Sbjct: 782 PGLRGEIGEQGLAG 795



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 42/166 (25%), Positives = 57/166 (34%), Gaps = 22/166 (13%)

Query: 210 QPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPG 269
           +P P  PP RPP   S +    +  +      +   + + GP   P P      +G    
Sbjct: 450 EPPPPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGP------KGDIGA 503

Query: 270 STAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGG 329
                 P P+  +     G    G  +G+    G   PP   G+         +  RG  
Sbjct: 504 IGPVGAPGPKGEKGDVGIGPFGQG-EKGEKGSLGLPGPPGRDGS---------KGMRGEP 553

Query: 330 GE-GE----GTHATHGPASPPGRRHDE-EVGAAVLRAGSGEGSRRG 369
           GE GE    G     GP  PPG       VGA  L+   GE   RG
Sbjct: 554 GELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRG 599


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.135    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,912,742
Number of Sequences: 37866
Number of extensions: 1950759
Number of successful extensions: 25640
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 2199
Number of HSP's that attempted gapping in prelim test: 11306
Number of HSP's gapped (non-prelim): 9357
length of query: 460
length of database: 18,247,518
effective HSP length: 106
effective length of query: 354
effective length of database: 14,233,722
effective search space: 5038737588
effective search space used: 5038737588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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