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Search of human proteins with 239748930
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748930 PREDICTED: hypothetical protein XP_002346860 [Homo
sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754436 PREDICTED: similar to hCG2038817 [Homo sapiens] 417 e-117
gi|239748930 PREDICTED: hypothetical protein XP_002346860 [Homo ... 417 e-117
gi|239742952 PREDICTED: hypothetical protein XP_002342703 [Homo ... 417 e-117
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 45 4e-05
gi|33286436 gametogenetin [Homo sapiens] 44 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 2e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 42 4e-04
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 42 4e-04
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 41 6e-04
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 41 8e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 40 0.001
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 40 0.001
gi|154146199 sal-like 3 [Homo sapiens] 40 0.002
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 39 0.002
gi|19924099 synapsin I isoform Ia [Homo sapiens] 39 0.003
gi|19924097 synapsin I isoform Ib [Homo sapiens] 39 0.003
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 39 0.004
gi|13699803 WAS protein family, member 3 [Homo sapiens] 39 0.004
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.004
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 38 0.005
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 38 0.007
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 38 0.007
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 38 0.007
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 37 0.009
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.015
gi|206597522 ArfGAP with SH3 domain, ankyrin repeat and PH domai... 37 0.015
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 37 0.015
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 36 0.019
gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo ... 36 0.019
>gi|239754436 PREDICTED: similar to hCG2038817 [Homo sapiens]
Length = 202
Score = 417 bits (1073), Expect = e-117
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS 60
MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS
Sbjct: 1 MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS 60
Query: 61 QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV 120
QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV
Sbjct: 61 QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV 120
Query: 121 AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR 180
AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR
Sbjct: 121 AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR 180
Query: 181 AAGFTLFKQPVLSRAVRAEVSH 202
AAGFTLFKQPVLSRAVRAEVSH
Sbjct: 181 AAGFTLFKQPVLSRAVRAEVSH 202
>gi|239748930 PREDICTED: hypothetical protein XP_002346860 [Homo
sapiens]
Length = 202
Score = 417 bits (1073), Expect = e-117
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS 60
MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS
Sbjct: 1 MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS 60
Query: 61 QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV 120
QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV
Sbjct: 61 QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV 120
Query: 121 AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR 180
AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR
Sbjct: 121 AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR 180
Query: 181 AAGFTLFKQPVLSRAVRAEVSH 202
AAGFTLFKQPVLSRAVRAEVSH
Sbjct: 181 AAGFTLFKQPVLSRAVRAEVSH 202
>gi|239742952 PREDICTED: hypothetical protein XP_002342703 [Homo
sapiens]
Length = 202
Score = 417 bits (1073), Expect = e-117
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS 60
MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS
Sbjct: 1 MDMLSIATLANKGFRISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGS 60
Query: 61 QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV 120
QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV
Sbjct: 61 QPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV 120
Query: 121 AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR 180
AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR
Sbjct: 121 AGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRR 180
Query: 181 AAGFTLFKQPVLSRAVRAEVSH 202
AAGFTLFKQPVLSRAVRAEVSH
Sbjct: 181 AAGFTLFKQPVLSRAVRAEVSH 202
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 45.1 bits (105), Expect = 4e-05
Identities = 59/184 (32%), Positives = 73/184 (39%), Gaps = 28/184 (15%)
Query: 4 LSIATLANKG-FRISKGRVLSSQITCLRFP-QPGAPAFTSVRPPPHPASSRLPGLGLGSQ 61
++ T+A G F + G LSS + L P QPGA + + +P P P +R GLGL
Sbjct: 899 VAATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGAR-GGLGLPEH 957
Query: 62 PLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVA 121
LP + R +S G P LS LG GP L P+ P RQ
Sbjct: 958 FLPPPPSSRSPSSSPGQLG-------QPPGELS-LGLATGP-----LSTPETPPRQPEPP 1004
Query: 122 GTICEKWGSGPSQWGAPRRGLS--GASANRSAAAPINPP---------FVRPA-RPPPPQ 169
+ G PR GLS G S P PP + PA PPPPQ
Sbjct: 1005 SLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQ 1064
Query: 170 PHQR 173
QR
Sbjct: 1065 VPQR 1068
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 43.5 bits (101), Expect = 1e-04
Identities = 44/144 (30%), Positives = 53/144 (36%), Gaps = 49/144 (34%)
Query: 32 PQPGAPAFTSVRPPPHPASSRLPGLGLGSQP--LPVGAAQRVRHASERGSGGGDRDAAAT 89
P P A S PPP PA + LPG +P PV +R+ AS RG G
Sbjct: 85 PPPEEAAAVSA-PPPAPAGTLLPGPSKWQKPAGTPVPRIRRLLEASHRGQG--------D 135
Query: 90 PASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANR 149
P SL PL P PP RQ V T+ PSQ+
Sbjct: 136 PPSLRPL-------------KPPPPPRQLSVKDTV----PRAPSQF-------------- 164
Query: 150 SAAAPINPPFVRPARPPPPQPHQR 173
PP + +PPPP P +R
Sbjct: 165 -------PPPLETWKPPPPLPSER 181
Score = 31.6 bits (70), Expect = 0.48
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 30/103 (29%)
Query: 87 AATPASLSPLGHPRG-----PFCLQFLEPPKPPMRQERV--------AGTICEKWGSGPS 133
+ATP L P+ P L+ P PP + AGT+ GPS
Sbjct: 54 SATPPGLMVPREPQASPSTLPLTLERPSPVMPPPEEAAAVSAPPPAPAGTLLP----GPS 109
Query: 134 QWGAP--------RRGLSGASANRSAAAPINPPFVRPARPPPP 168
+W P RR L + + +PP +RP +PPPP
Sbjct: 110 KWQKPAGTPVPRIRRLLEASHRGQG-----DPPSLRPLKPPPP 147
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.1 bits (100), Expect = 2e-04
Identities = 45/168 (26%), Positives = 58/168 (34%), Gaps = 21/168 (12%)
Query: 32 PQPGAPAFTSVRPPPH-PASSRLP-----GLGLGSQPLPVGAAQRVRHASERGSGGGDRD 85
P AP +RPPP A S P + G +P P G A+ A+ G
Sbjct: 116 PAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG 175
Query: 86 AAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPS------QWGAPR 139
P G P GP Q L + A +GP+ + AP
Sbjct: 176 PGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPG 235
Query: 140 RGLS-----GASANRSAAAPINP----PFVRPARPPPPQPHQRPIVRP 178
+ GA+A + AAP P P A PPPP P + RP
Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARP 283
Score = 39.7 bits (91), Expect = 0.002
Identities = 41/153 (26%), Positives = 56/153 (36%), Gaps = 8/153 (5%)
Query: 32 PQPGAPAFTSVRPPPHPAS-SRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATP 90
P P APA PPP PA+ +R PG G P A A+ + G A P
Sbjct: 261 PAPAAPAAAPPPPPPAPATLARPPGHPAGP---PTAAPAVPPPAAAQNGGSAGAAPAPAP 317
Query: 91 ASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRS 150
A+ P G P P P ++ E + + P+ G + +A+
Sbjct: 318 AAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVV---QAAPPAAQTLAASGPASTAASMV 374
Query: 151 AAAPINPPFVRPARPPPPQPHQRPIVRPRRAAG 183
+ PA PPP P P P+ AAG
Sbjct: 375 IGPTMQGALPSPAAVPPPAP-GTPTGLPKGAAG 406
Score = 37.4 bits (85), Expect = 0.009
Identities = 49/161 (30%), Positives = 58/161 (36%), Gaps = 27/161 (16%)
Query: 33 QPGAPAFTSVRPPPHPASSRLPGLGLG-SQPLPVGAAQRVRHASERGSGG--GDRDAAAT 89
+P PA + R P P PG G G +P GAAQ + GS AAA
Sbjct: 159 KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLN-----GSAALLNSHHAAAP 213
Query: 90 PASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEK----WGSGPSQWGAPRRGLSGA 145
SL GP L L P P GT+ + + P AP + A
Sbjct: 214 AVSLVN----NGPAALLPLPKPAAP-------GTVIQTPPFVGAAAPPAPAAPSPPAAPA 262
Query: 146 SANRSAAAPINPP----FVRPARPPPPQPHQRPIVRPRRAA 182
A +AA P PP RP P P P V P AA
Sbjct: 263 PAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAA 303
Score = 32.3 bits (72), Expect = 0.28
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 120 VAGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIV 176
V+G+ G+GP+ AP G GA+ A P P RP PP P +RP+V
Sbjct: 63 VSGSPAGAAGAGPA---APAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSP-RRPLV 115
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 42.0 bits (97), Expect = 4e-04
Identities = 42/158 (26%), Positives = 58/158 (36%), Gaps = 18/158 (11%)
Query: 32 PQPGAP-------AFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDR 84
P+PG P S PPPHP P G+Q G R GG++
Sbjct: 157 PRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQ--GPPPRPGKPEGPPPQGGNQ 214
Query: 85 DAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSG 144
P G P GP +P PP + G ++ G+ P + P R
Sbjct: 215 SQGPPPRP----GKPEGPPSQGGNKPQGPPPHPGKPQGPPPQE-GNKPQRPPPPGRPQGP 269
Query: 145 ASANRSAAAPINPPFVRPARPPPP----QPHQRPIVRP 178
+ P+ PP +P PPPP +PH+ P +P
Sbjct: 270 PPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQP 307
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 42.0 bits (97), Expect = 4e-04
Identities = 40/147 (27%), Positives = 53/147 (36%), Gaps = 17/147 (11%)
Query: 35 GAPAFTSVRPPPHPASSRLPGLGLG-SQPLPVGAAQRVRHASERGSGGGDRDAAATPASL 93
G+ AFTS PP P L G L + PL + A R R E GGG
Sbjct: 1325 GSSAFTSFLPP-RPLVHPLTGKALDPASPLGLALAARERALKESSEGGG----------- 1372
Query: 94 SPLGHPRGPFCLQFLEPPKPPMRQERV-AGTICEKWGSGPSQWGAPRRGLSGASANRSAA 152
+P PR P PP P + WG+ P G ++ +
Sbjct: 1373 APQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKS 1432
Query: 153 APINPPFVRPA---RPPPPQPHQRPIV 176
P +PP R + R PP P P++
Sbjct: 1433 LPASPPAARRSLLHRLPPTAPGVGPLL 1459
Score = 28.5 bits (62), Expect = 4.1
Identities = 35/135 (25%), Positives = 42/135 (31%), Gaps = 15/135 (11%)
Query: 42 VRPPPHPASSRLPGLGLGSQPLP--VGAAQRVRHASERGSGGGDRDAAATPASLSPLGHP 99
V PPP P+ G L +PLP + + + G TPA +PL
Sbjct: 1546 VLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPL--- 1602
Query: 100 RGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPF 159
PP PP T+ S S GASA P PP
Sbjct: 1603 ----------PPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPA 1652
Query: 160 VRPARPPPPQPHQRP 174
P PQP P
Sbjct: 1653 PAAPAPAAPQPGPDP 1667
Score = 27.7 bits (60), Expect = 6.9
Identities = 34/125 (27%), Positives = 42/125 (33%), Gaps = 23/125 (18%)
Query: 44 PPPHPASSRLPGLG--LGSQPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRG 101
PPP A P L G P P A H G GGG A P PR
Sbjct: 1035 PPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLP---PRA 1091
Query: 102 PFCLQFLEPPK------PPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPI 155
++ P ++Q +V G P + G GL A + S A+P
Sbjct: 1092 ASAAMYVPARSGRGRKGPLVKQTKVEGE--------PQKGG----GLPPAPSPTSPASPQ 1139
Query: 156 NPPFV 160
PP V
Sbjct: 1140 PPPAV 1144
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 41.2 bits (95), Expect = 6e-04
Identities = 44/154 (28%), Positives = 56/154 (36%), Gaps = 14/154 (9%)
Query: 30 RFPQPGAPAFTSVRP-PPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAA 88
R P G P PP+PA+S +PGL G P + +R S G +
Sbjct: 535 RPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPS-----SGYSSQSG 589
Query: 89 TPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASAN 148
TP +L P G P +PPKP ERV S A ++
Sbjct: 590 TP-TLPPKGLAGPPASPGKAQPPKP----ERVTSLRSPGASVSSSLTSLCSSSSDPAPSD 644
Query: 149 RSA---AAPINPPFVRPARPPPPQPHQRPIVRPR 179
RS P+ FV P P P P P +PR
Sbjct: 645 RSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPR 678
Score = 34.7 bits (78), Expect = 0.057
Identities = 43/172 (25%), Positives = 54/172 (31%), Gaps = 36/172 (20%)
Query: 16 ISKGRVLSSQITCLRFPQPGAPAFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHAS 75
+S SS T L+ PG+P P P PASS + Q PVG ++
Sbjct: 812 VSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSK------ 865
Query: 76 ERGSGGGDRDAAATP---------ASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICE 126
GG R+ P L +G P G P P + +
Sbjct: 866 ---GGGPPREDVGAPLVTPSLLQMVRLRSVGAPGG--------APTPALGPSAPQKPLRR 914
Query: 127 KWGSGPSQWGAPRRGLS----------GASANRSAAAPINPPFVRPARPPPP 168
S AP GL AS S+A P PP P P P
Sbjct: 915 ALSGRASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRPPQSP 966
Score = 29.6 bits (65), Expect = 1.8
Identities = 39/165 (23%), Positives = 57/165 (34%), Gaps = 38/165 (23%)
Query: 35 GAPAFTSVRPPPHP---ASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATPA 91
G PA PP P S R PG + S + ++ S+R P
Sbjct: 600 GPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSG----------PQ 649
Query: 92 SLSPLG-------HPRGPFCLQFLEPPKPPMRQERVAGTIC---------EKWGSGPSQW 135
L+PLG HP+ P F PP P A + + P
Sbjct: 650 ILTPLGDRFVIPPHPKVP--APFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSP 707
Query: 136 GAPRRGLSGASAN----RSAAAPINPPFVRPARPPPPQPHQRPIV 176
P+ L+ + + + P +PP P+ PPP P ++P V
Sbjct: 708 PTPQTTLTPLQESPVISKDQSPPPSPP---PSYHPPPPPTKKPEV 749
Score = 28.1 bits (61), Expect = 5.3
Identities = 37/140 (26%), Positives = 50/140 (35%), Gaps = 39/140 (27%)
Query: 44 PPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPF 103
PPP P S P P P + V A +A+ + PL P P
Sbjct: 729 PPPSPPPSYHP------PPPPTKKPEVVVEAP-----------SASETAEEPLQDPNWP- 770
Query: 104 CLQFLEPPKPPMRQERVAG------------TICEKWGSGPSQWGAPRRGLSGASANRSA 151
PP PP +E+ ++ +GPS G+P S A+++ SA
Sbjct: 771 ------PPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPS--GSPELVSSPAASSSSA 822
Query: 152 AA-PINPPFVRPARPPPPQP 170
A I PP P PP P
Sbjct: 823 TALQIQPPGSPDPPPAPPAP 842
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 40.8 bits (94), Expect = 8e-04
Identities = 46/143 (32%), Positives = 57/143 (39%), Gaps = 25/143 (17%)
Query: 46 PHPASSRLPGLGLGSQPLPVGAAQRVRHASE-RGSGGGDRDAAATPASLSPLGHPRGPFC 104
P PA+ R LG+ PL A R R AS+ RG GGG P+ P G P G
Sbjct: 78 PQPAT-RSGRLGVWGGPLRHSWAPRPRQASQTRGGGGG-------PSLPGPAGRPSG--- 126
Query: 105 LQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPAR 164
+ RV + SG S P R L+ ASA ++ A + RP
Sbjct: 127 ----------RSRSRVGAR--GRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTE 174
Query: 165 PPP-PQPHQRPIVRPRRAAGFTL 186
PP P P R P+R A L
Sbjct: 175 APPFPAPRVRAPPPPQRPAQLRL 197
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 40.0 bits (92), Expect = 0.001
Identities = 41/145 (28%), Positives = 53/145 (36%), Gaps = 14/145 (9%)
Query: 40 TSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHA-SERGSG--GGDRDAAATPAS---L 93
+S PPP S+ P LP A+ ++RGSG G R + +P+
Sbjct: 244 SSYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPA 303
Query: 94 SPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRSAAA 153
PLG P GP F PP PP + G G G P +
Sbjct: 304 PPLGSPPGPKP-GFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTP-------PPPSPPSF 355
Query: 154 PINPPFVRPARPPPPQPHQRPIVRP 178
P +P F P PPPP P + P
Sbjct: 356 PPHPDFAAPPPPPPPPAADYPTLPP 380
Score = 33.1 bits (74), Expect = 0.16
Identities = 40/137 (29%), Positives = 44/137 (32%), Gaps = 42/137 (30%)
Query: 32 PQPGAPAFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATPA 91
P+PG PPP P P +G+ P PVG GS G TP
Sbjct: 312 PKPG------FAPPPAPPPPPPPMIGIPPPPPPVGF----------GSPG-------TPP 348
Query: 92 SLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRSA 151
SP P P F PP PP T+ P P G
Sbjct: 349 PPSPPSFPPHP---DFAAPPPPPPPPAADYPTL------PPPPLSQPTGG---------- 389
Query: 152 AAPINPPFVRPARPPPP 168
A P PP P PPPP
Sbjct: 390 APPPPPPPPPPGPPPPP 406
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 40.0 bits (92), Expect = 0.001
Identities = 50/193 (25%), Positives = 61/193 (31%), Gaps = 55/193 (28%)
Query: 32 PQPGAPAFTSVRPPPHPASSRLPGL--GLGSQPLPVGAAQRVRHASERGSGGGDRDAAAT 89
P PG P S PP P + PG+ + P+P GAA ++ G +
Sbjct: 233 PPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSH 292
Query: 90 PASLSP--------------------LGHPR-GPFCLQFLEPPKPPMRQERVAGTICEKW 128
P P LGHP GP PP+PP
Sbjct: 293 PHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPH--------- 343
Query: 129 GSGPSQWGAPRRGLSGASA----------NRSAAAPINPP--FVRPARP----------P 166
GP G P RG S P+ PP + P RP P
Sbjct: 344 -PGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLP 402
Query: 167 PPQPHQRPIVRPR 179
PP+P RP V PR
Sbjct: 403 PPRPTPRPPVPPR 415
Score = 36.6 bits (83), Expect = 0.015
Identities = 36/122 (29%), Positives = 47/122 (38%), Gaps = 12/122 (9%)
Query: 49 ASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFL 108
A + G L ++P+ V A + ER +R AA +PL P L F
Sbjct: 158 AIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ----NPLSQADRPHQL-FA 212
Query: 109 EPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPP 168
+ P PP V ++ GSG G P G A P P + PA PPPP
Sbjct: 213 DAPPPPSAPNPVVSSL----GSGLPPPGMPPPGSFPPPVPPPGALP---PGIPPAMPPPP 265
Query: 169 QP 170
P
Sbjct: 266 MP 267
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 39.7 bits (91), Expect = 0.002
Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 22/179 (12%)
Query: 22 LSSQITCLRFPQPGAPAFTSVRPP--PHPASSRLPGLGLGSQPLPVGAAQRVRHASERGS 79
+ SQ+ ++ P P P+ + P P PA S+LP GL + PL GA A+ GS
Sbjct: 226 IRSQVALMQRPPP-RPSLSPAAAPSAPGPAPSQLP--GLAALPLSAGAPA----AAIAGS 278
Query: 80 GGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPR 139
G A A PL P P P A + P+ AP+
Sbjct: 279 GPA---APAAFEGAQPLSRPESG-----ASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQ 330
Query: 140 RGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRRAAGFTLFKQPVLSRAVRA 198
S + S + P + A P P P + P+ +A +F P++S A A
Sbjct: 331 SAASSQPQSASTPPALAPGSLLGAAPGLPSP-----LLPQTSASGVIFPNPLVSIAATA 384
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 39.3 bits (90), Expect = 0.002
Identities = 45/165 (27%), Positives = 58/165 (35%), Gaps = 28/165 (16%)
Query: 34 PGAPAFTSVRPPPHPASSR-LPGL-GLGSQPLPVGAAQRVRHASERGSGG---------- 81
PGAP R PP PA + PGL G +P GA ERG G
Sbjct: 404 PGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGE 463
Query: 82 -------GDRDAAATPASLSPLGHP--RGPFCLQFLEPPKPPMRQERVAGTICEKWGSG- 131
G+ A P + G P RGP + K P + G + +G
Sbjct: 464 DGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGE 523
Query: 132 PSQWGAP----RRGLSGASANRSAAAPINPPFVR--PARPPPPQP 170
P + G P RG+ G+ + PP + RP PP P
Sbjct: 524 PGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGP 568
Score = 33.1 bits (74), Expect = 0.16
Identities = 39/128 (30%), Positives = 48/128 (37%), Gaps = 22/128 (17%)
Query: 33 QPGAPAFTSVRPPPHPASSRLPGL-GLGSQPLPVGAAQRVRHASERGSGGG--DRDAAAT 89
+PGA + R PP P LPGL G +P G GS GG DR +
Sbjct: 982 KPGANGLSGERGPPGPQG--LPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGS 1039
Query: 90 PASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANR 149
P + GHP PP P AG ++ SGP A G G + +R
Sbjct: 1040 PGAPGAPGHP---------GPPGP----VGPAGKSGDRGESGP----AGPAGAPGPAGSR 1082
Query: 150 SAAAPINP 157
A P P
Sbjct: 1083 GAPGPQGP 1090
Score = 27.7 bits (60), Expect = 6.9
Identities = 45/169 (26%), Positives = 53/169 (31%), Gaps = 33/169 (19%)
Query: 33 QPGAPAFT--SVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGG-------- 82
+PG P S RP P S G+ P P G ERG GG
Sbjct: 550 KPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPG 609
Query: 83 ---DRDAAATPASLSPLGH-----PRGPFCLQFLEPPKPPMRQERVAGTICEKWGSG--- 131
+ P P G P GP LQ L P + G K +G
Sbjct: 610 KNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPG 669
Query: 132 ----------PSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQP 170
P + G P GL+GA R A P P + A PP P
Sbjct: 670 APGGKGDAGAPGERGPP--GLAGAPGLRGGAGPPGPEGGKGAAGPPGPP 716
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 38.9 bits (89), Expect = 0.003
Identities = 47/162 (29%), Positives = 61/162 (37%), Gaps = 22/162 (13%)
Query: 32 PQPGAPAFTSVRPPPHPASSRLPGLG--LGSQ-----PLPVGAAQRVRHASE---RGSGG 81
PQ P RPPP L GLG GS P P A Q+ + +G G
Sbjct: 474 PQRQGPPLQQ-RPPPQ-GQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR 531
Query: 82 GDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGP----SQWGA 137
R A P + P P + PP+ RQ V+G K P + G
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQAT-RQTSVSGPAPPKASGAPPGGQQRQGP 590
Query: 138 PRR--GLSGASANRSAAAPI---NPPFVRPARPPPPQPHQRP 174
P++ G +G + S A P+ PP + RP P P RP
Sbjct: 591 PQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRP 632
Score = 35.4 bits (80), Expect = 0.033
Identities = 42/146 (28%), Positives = 50/146 (34%), Gaps = 25/146 (17%)
Query: 32 PQPGAPAF---TSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAA 88
P PGA TS +P PA R P G QP P G ++ +R G +
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGP-GPQRQGPPLQQRPPPQGQQH--- 492
Query: 89 TPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASAN 148
LS LG P G Q L P +Q P+ AP G +
Sbjct: 493 ----LSGLGPPAGSPLPQRLPSPTSAPQQ--------------PASQAAPPTQGQGRQSR 534
Query: 149 RSAAAPINPPFVRPARPPPPQPHQRP 174
A P PP RP P PQ P
Sbjct: 535 PVAGGPGAPPAARPPASPSPQRQAGP 560
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 38.9 bits (89), Expect = 0.003
Identities = 47/162 (29%), Positives = 61/162 (37%), Gaps = 22/162 (13%)
Query: 32 PQPGAPAFTSVRPPPHPASSRLPGLG--LGSQ-----PLPVGAAQRVRHASE---RGSGG 81
PQ P RPPP L GLG GS P P A Q+ + +G G
Sbjct: 474 PQRQGPPLQQ-RPPPQ-GQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR 531
Query: 82 GDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGP----SQWGA 137
R A P + P P + PP+ RQ V+G K P + G
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQAT-RQTSVSGPAPPKASGAPPGGQQRQGP 590
Query: 138 PRR--GLSGASANRSAAAPI---NPPFVRPARPPPPQPHQRP 174
P++ G +G + S A P+ PP + RP P P RP
Sbjct: 591 PQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRP 632
Score = 35.4 bits (80), Expect = 0.033
Identities = 42/146 (28%), Positives = 50/146 (34%), Gaps = 25/146 (17%)
Query: 32 PQPGAPAF---TSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAA 88
P PGA TS +P PA R P G QP P G ++ +R G +
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGP-GPQRQGPPLQQRPPPQGQQH--- 492
Query: 89 TPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASAN 148
LS LG P G Q L P +Q P+ AP G +
Sbjct: 493 ----LSGLGPPAGSPLPQRLPSPTSAPQQ--------------PASQAAPPTQGQGRQSR 534
Query: 149 RSAAAPINPPFVRPARPPPPQPHQRP 174
A P PP RP P PQ P
Sbjct: 535 PVAGGPGAPPAARPPASPSPQRQAGP 560
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 38.5 bits (88), Expect = 0.004
Identities = 44/163 (26%), Positives = 53/163 (32%), Gaps = 32/163 (19%)
Query: 32 PQPGAPAFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASER-----GSGGGDRDA 86
P PGA A PPP P PGL G+ P A+ AS R G G RD
Sbjct: 20 PAPGASA-----PPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRHGLALPEGDGSRDP 74
Query: 87 AATPASLSPLG-----HPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSG----PSQWGA 137
P S P+ C P P + AG GSG PS +
Sbjct: 75 PDRPRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPAGSGSNNSPSSSSS 134
Query: 138 PRRGLSGA-------------SANRSAAAPINPPFVRPARPPP 167
P S + +A S+ AP+ P P P
Sbjct: 135 PTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPGTGVP 177
>gi|13699803 WAS protein family, member 3 [Homo sapiens]
Length = 502
Score = 38.5 bits (88), Expect = 0.004
Identities = 45/160 (28%), Positives = 56/160 (35%), Gaps = 35/160 (21%)
Query: 32 PQPGAPAFTSVRPPPH--------------PASSRLPGLGLGSQPLPVGAAQRVRHASER 77
PQP P++ + PPH AS+R L QP P Q S+
Sbjct: 260 PQPVTPSYAAGDVPPHGPASQAAEHEYRPPSASARHMALNRPQQPPPPPPPQ-APEGSQA 318
Query: 78 GSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGA 137
+ D PA + +P GP PP PP A T P Q
Sbjct: 319 SAPMAPADYGMLPAQIIEYYNPSGP-------PPPPPPPVIPSAQTAFVSPLQMPMQPPF 371
Query: 138 PRRGLSGASANRSAAAPINPPFV-------RPARPPPPQP 170
P ASA+ + AAP +PP P PPPP P
Sbjct: 372 P------ASASSTHAAPPHPPSTGLLVTAPPPPGPPPPPP 405
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.5 bits (88), Expect = 0.004
Identities = 47/160 (29%), Positives = 52/160 (32%), Gaps = 34/160 (21%)
Query: 30 RFPQPGAPAFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAAT 89
R P+ A + PPP PA P PV AA R + AA
Sbjct: 113 RAPRGAPAAAAAAAPPPTPAPP--------PPPAPVAAAAPARAPRAAAA------AATA 158
Query: 90 PASLSPLGH-PRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASAN 148
P S P PR PP P VA PRR A A
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP------------AGPRRAPPPAVAA 206
Query: 149 RSAAAPINPPFVRPA-----RPPPPQPHQRPIVRPRRAAG 183
R P+ PP PA +PPPPQP P RA G
Sbjct: 207 REP--PLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGG 244
Score = 33.1 bits (74), Expect = 0.16
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 137 APRRGLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRRAA 182
AP R GA A +AAAP PP P PP P P PR AA
Sbjct: 110 APPRAPRGAPAAAAAAAP--PPTPAPPPPPAPVAAAAPARAPRAAA 153
Score = 29.6 bits (65), Expect = 1.8
Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 13/82 (15%)
Query: 110 PPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANRSAAAPIN-PPFVRPARP--- 165
PP+ P A P AP + A A R+AAA PP PA+P
Sbjct: 111 PPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPR 170
Query: 166 ---------PPPQPHQRPIVRP 178
PPP P P V P
Sbjct: 171 AQRAAPLAAPPPAPAAPPAVAP 192
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 38.1 bits (87), Expect = 0.005
Identities = 54/175 (30%), Positives = 63/175 (36%), Gaps = 40/175 (22%)
Query: 37 PAFTSVRPPP---HPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATPASL 93
PA + PP PA++RL L A R R +G GGGD A+ P +L
Sbjct: 50 PAPAAAHPPAPRERPAAARLSALA--------AAQPRRRSPGPQGGGGGDI-ASPLPPAL 100
Query: 94 SPLGHPRGPFCLQ----FLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGLSGASANR 149
P G P P P PP R PS P R + SA
Sbjct: 101 QPRGAPAVPAAPSPGPLPARPSSPPPR---------------PSLPSGPHRPVLPPSA-- 143
Query: 150 SAAAPINPPFVRP---ARPPPPQPHQRPIVRPRRAAGFTLFKQPVLSRAVRAEVS 201
AAP PP RP + QRP R RR AG P L+R E S
Sbjct: 144 -LAAP-RPPLARPLPQGSVTAREQEQRP--RSRRRAGAPEALGPALTRIHNVEGS 194
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 38.1 bits (87), Expect = 0.005
Identities = 46/163 (28%), Positives = 56/163 (34%), Gaps = 25/163 (15%)
Query: 32 PQPGAPAFTSVRPPP---HPASSRLPGLGLGSQPLPVGAAQRVRHASERGSG------GG 82
P PG P RPPP + + P G +P P G Q R G GG
Sbjct: 94 PHPGKPE----RPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGG 149
Query: 83 DRDAAATPASLSPLGHP--RGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRR 140
++ P P G P G PP P + G + GP G P+
Sbjct: 150 NQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQ----GPPPPGKPQ- 204
Query: 141 GLSGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRRAAG 183
A + P PP +P PPPP RP PR A G
Sbjct: 205 --GPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRP---PRPAQG 242
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/139 (29%), Positives = 52/139 (37%), Gaps = 27/139 (19%)
Query: 63 LPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQE---- 118
LP+ AA+R +G A A LSP + P + PP PP E
Sbjct: 418 LPMRAAKRPYKTYSQG---------APEAPLSPTLNTPAPVAMPASPPPGPPPAPEPGPP 468
Query: 119 -------RVAGTICEKWGS--GPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQ 169
A ++ GS G G G S A++ + AP PP R PPPP+
Sbjct: 469 PSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAASVITYTAPPRPPKKREYPPPPPE 528
Query: 170 PHQRP-----IVRPRRAAG 183
P P V P AAG
Sbjct: 529 PAATPTSPATAVSPATAAG 547
Score = 31.2 bits (69), Expect = 0.63
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 29 LRFPQPGA-PAFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAA 87
L P P A PA PPP P P + + P P + H GGG A+
Sbjct: 443 LNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAP----SVIVHGGSSSGGGGSGTAS 498
Query: 88 ATPASLSPLGHPRGPFCLQFLEPPKPPMRQE 118
G + + + PP+PP ++E
Sbjct: 499 T--------GGSQAASVITYTAPPRPPKKRE 521
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/139 (29%), Positives = 52/139 (37%), Gaps = 27/139 (19%)
Query: 63 LPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQE---- 118
LP+ AA+R +G A A LSP + P + PP PP E
Sbjct: 418 LPMRAAKRPYKTYSQG---------APEAPLSPTLNTPAPVAMPASPPPGPPPAPEPGPP 468
Query: 119 -------RVAGTICEKWGS--GPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQ 169
A ++ GS G G G S A++ + AP PP R PPPP+
Sbjct: 469 PSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAASVITYTAPPRPPKKREYPPPPPE 528
Query: 170 PHQRP-----IVRPRRAAG 183
P P V P AAG
Sbjct: 529 PAATPTSPATAVSPATAAG 547
Score = 31.2 bits (69), Expect = 0.63
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 29 LRFPQPGA-PAFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAA 87
L P P A PA PPP P P + + P P + H GGG A+
Sbjct: 443 LNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAP----SVIVHGGSSSGGGGSGTAS 498
Query: 88 ATPASLSPLGHPRGPFCLQFLEPPKPPMRQE 118
G + + + PP+PP ++E
Sbjct: 499 T--------GGSQAASVITYTAPPRPPKKRE 521
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 37.7 bits (86), Expect = 0.007
Identities = 60/212 (28%), Positives = 82/212 (38%), Gaps = 52/212 (24%)
Query: 17 SKGRVLSSQITCLRFPQPGA------PAFTSVRPPPHPASSRLPGLGLGSQPLPV----- 65
S GR +S ++ P P A P+ +P PA+ L GLG QP P
Sbjct: 531 SAGRKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSGLGLQPGPERTSTT 590
Query: 66 -------GAAQRVRHASERGSGGGDRDAAATP-----ASLSPLGHP--RGPFCLQFLE-- 109
G+AQ+ S +G+ A P AS SP P + P L+ +
Sbjct: 591 KSKELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGASPSPSQPPADQSPHTLRKVSKK 650
Query: 110 ----PPKPPMRQ-----ERVAG-----TICEKWGSGPSQWGAPR-RGLSGASANRSAAAP 154
PPK P Q ++ AG ++ S PS +G +G S AS S AA
Sbjct: 651 LAPIPPKVPFGQPGAMADQSAGQPSPVSLSPTPPSTPSPYGLSYPQGYSLASGQLSPAAA 710
Query: 155 INPPFVRPA--------RPPPPQPHQRPIVRP 178
PP P+ P P+P QRP + P
Sbjct: 711 --PPLASPSVFTSTLSKSRPTPKPRQRPTLPP 740
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 37.4 bits (85), Expect = 0.009
Identities = 43/158 (27%), Positives = 59/158 (37%), Gaps = 28/158 (17%)
Query: 34 PGAPAFTSVRPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASER-----GSGGGDRDAAA 88
PG P PPP P+SS + L P G Q + S R GG R
Sbjct: 1448 PGLPL-----PPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPG 1502
Query: 89 TPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGP--SQWGAPRRGLSGAS 146
P + P+GP P+PP R E + S P + G RG+ G
Sbjct: 1503 LPQA------PQGP-------SPRPPTRYE--PQRVNSGLSSDPHFEEPGPMVRGVGGTP 1547
Query: 147 ANRSAAAPINPPFVRPARPPPPQPHQRPIVRPRRAAGF 184
+ + +P PP R P P+ Q + P ++GF
Sbjct: 1548 RDSAGVSPF-PPKRRERPPRKPELLQEESLPPPHSSGF 1584
Score = 37.0 bits (84), Expect = 0.011
Identities = 42/154 (27%), Positives = 55/154 (35%), Gaps = 41/154 (26%)
Query: 44 PPPHPAS---SRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPR 100
PPPH + S+ G G ++ G H R R + P+S+ P P
Sbjct: 1577 PPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYR-PSSMEPWMEPL 1635
Query: 101 GPFCLQFLEPPKPPMRQERVAGTICEKWGSGP-------------SQWGAPRRGLSGASA 147
PF E VAGT + SG SQ +P GL GA+
Sbjct: 1636 SPF--------------EDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAE 1681
Query: 148 NR----SAAAPIN------PPFVRPARPPPPQPH 171
++P+N PP P R PPP PH
Sbjct: 1682 GPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPH 1715
Score = 27.7 bits (60), Expect = 6.9
Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 19/128 (14%)
Query: 68 AQRVRHASERGSGGGDR---DAAATPASLS-PLGHPRGPFCLQFLEPPKPPMRQERVAGT 123
A++++ E+ R + AA PA+ S P P P + PP PP T
Sbjct: 487 AEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVP--KELPAPPAPPPASAPTPET 544
Query: 124 ICEKWGSGPSQWGAPRRGLSGA-------------SANRSAAAPINPPFVRPARPPPPQP 170
E+ P P G++ A S+ A+P+ P P PP+
Sbjct: 545 EPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEE 604
Query: 171 HQRPIVRP 178
P P
Sbjct: 605 VPPPTTPP 612
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 36.6 bits (83), Expect = 0.015
Identities = 41/140 (29%), Positives = 51/140 (36%), Gaps = 18/140 (12%)
Query: 46 PHPASSRLPGLGLG-----SQPLPVGAAQRVRHASERGSGGGDRDAAATPASLSPLGHPR 100
P PA+ R P G G S+ L A A S G A A P+ P G
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG--- 276
Query: 101 GPFCLQFLEPPK--PPMRQERVA-GTICEKWGSGPSQWGAPRRGL---SGASANRSAAAP 154
LQ L PP+ PP + A G + + PS G R + A+ A P
Sbjct: 277 ----LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLP 332
Query: 155 INPPFVRPARPPPPQPHQRP 174
+PP P PP P P
Sbjct: 333 PSPPLATPLPLAPPSPSAPP 352
Score = 32.3 bits (72), Expect = 0.28
Identities = 40/156 (25%), Positives = 51/156 (32%), Gaps = 33/156 (21%)
Query: 32 PQPGAPAFTSVRPP---------PHPASSRLPGLGLGSQPLPVGAAQRVRHASERGSGGG 82
P PG P+ R P PA S P +P G + V ASE +
Sbjct: 167 PTPGTPSPAMARRSRAAGTEVGLPRPAPSARP------RPPTEGPRKSVSSASEHSTTEP 220
Query: 83 DRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICEKWGSGPSQWGAPRRGL 142
A P++ L P P P R SGPS G PR
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR-------------SGPSARGTPR--- 264
Query: 143 SGASANRSAAAPINPPFVRPARPPPPQPHQRPIVRP 178
A A+ S P +RP + PP+ P + P
Sbjct: 265 --APAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP 298
Score = 31.6 bits (70), Expect = 0.48
Identities = 41/155 (26%), Positives = 52/155 (33%), Gaps = 16/155 (10%)
Query: 29 LRFPQPGAPAFTSVRPPPHPASSRLPGL-GLGSQPL----------PVGAAQRVRHASER 77
L P P P+ + PP P + P L GL S PL P A A
Sbjct: 576 LTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPS 635
Query: 78 GSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPMRQ--ERVAGTICEKWGSGPSQW 135
ATP+ +P F PP PP++ A + PSQ
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ- 694
Query: 136 GAPRRGLSGASANRSAAAPINPPFVRPARPPPPQP 170
AP L+ + P +PP A PPP P
Sbjct: 695 -APP-SLAAPPLQVPPSPPASPPMSPSATPPPQAP 727
Score = 27.3 bits (59), Expect = 9.0
Identities = 40/164 (24%), Positives = 52/164 (31%), Gaps = 29/164 (17%)
Query: 23 SSQITCLRFPQPGAPAFTSV----RPPPHPASSRLPGLGLGSQPLPVGAAQRVRHASERG 78
S ++ L P P AP ++ PP PAS L L S P A + A
Sbjct: 608 SPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP 667
Query: 79 SGGGDRDA------------AATPASLSPLGHPRGPFCLQFLEPPKPPMRQERVAGTICE 126
A +ATP S +P P + P PPM
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS-------- 719
Query: 127 KWGSGPSQWGAPRRGLSGASANRSAAAPINPPFVRPARPPPPQP 170
+ P Q P L+ + P +PP A PPP P
Sbjct: 720 --ATPPPQAPPP---LAAPPLQVPPSPPASPPMSPSATPPPRVP 758
>gi|206597522 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform b [Homo sapiens]
Length = 961
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 33 QPGAPAFTSVRPPPHPAS--SRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATP 90
+P P + +RPPP P SRLP Q P A + + +G G D +AT
Sbjct: 820 KPAPPGISQIRPPPLPPQPPSRLP------QKKPAPGADKSTPLTNKGQPRGPVDLSATE 873
Query: 91 ASLSPLGHPRGPFCLQFLEPPKPPMRQER 119
A L PL + L+PP P R+ +
Sbjct: 874 A-LGPLSN------AMVLQPPAPMPRKSQ 895
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 33 QPGAPAFTSVRPPPHPAS--SRLPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAAATP 90
+P P + +RPPP P SRLP Q P A + + +G G D +AT
Sbjct: 865 KPAPPGISQIRPPPLPPQPPSRLP------QKKPAPGADKSTPLTNKGQPRGPVDLSATE 918
Query: 91 ASLSPLGHPRGPFCLQFLEPPKPPMRQER 119
A L PL + L+PP P R+ +
Sbjct: 919 A-LGPLSN------AMVLQPPAPMPRKSQ 940
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 36.2 bits (82), Expect = 0.019
Identities = 41/149 (27%), Positives = 53/149 (35%), Gaps = 33/149 (22%)
Query: 31 FPQPGAPAFTSVRPPPHPASSR---LPGLGLGSQPLPVGAAQRVRHASERGSGGGDRDAA 87
+ PG+P V P ++ PG G G+QP +AQ R GSG
Sbjct: 35 YTAPGSPEPPDVGPDAKGPANWPWVAPGRGAGAQPRLSVSAQNSRQRHGPGSG------- 87
Query: 88 ATPASLSPLGHPRGPFCLQFLEPPKPPMRQERV--AGTICEKWGSGPSQWGAPRRGLSGA 145
PRGP P+PP Q R +G + +G GP G SGA
Sbjct: 88 ----------FPRGPG-----SGPRPPQPQLRTLPSGEMEVIFGVGPLF------GCSGA 126
Query: 146 SANRSAAAPINPPFVRPARPPPPQPHQRP 174
+ P F+ P P P P P
Sbjct: 127 DDREAQQQFTEPAFISPLPPGPASPAAVP 155
>gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo
sapiens]
Length = 368
Score = 36.2 bits (82), Expect = 0.019
Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 16/138 (11%)
Query: 19 GRVLSSQITCLRFPQPGAPAFTSVRPPPHPASS--RLPGLGLGSQPLPVGAAQRVRHASE 76
G+ L SQ++ R P P P P P S ++P G P +
Sbjct: 213 GKELVSQVSTRRAVHPPTPKRARTGPGPSPLRSGHQVPSPGSVLSP------HMLFGHPP 266
Query: 77 RGSGGGDRDAAATPASLSPLGHPRGPFCLQFLEPPKPPM-RQERVAGTICEKWGSGPSQW 135
+GGGD +P L P +GP PP+P R R +W S
Sbjct: 267 SAAGGGDSGGEGSPEPLLPPA--QGPPA-----PPRPQKARGSRSRRRYLWRWDSAAGVA 319
Query: 136 GAPRRGLSGASANRSAAA 153
G R LS ++A +AAA
Sbjct: 320 GGARAALSSSAAEAAAAA 337
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,443,382
Number of Sequences: 37866
Number of extensions: 786905
Number of successful extensions: 8555
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 725
Number of HSP's that attempted gapping in prelim test: 6448
Number of HSP's gapped (non-prelim): 2478
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.