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Search of human proteins with 239748639
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
(286 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 578 e-165
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 560 e-160
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 60 2e-09
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 57 2e-08
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 57 2e-08
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 57 2e-08
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 56 3e-08
gi|109452587 family with sequence similarity 98, member B isofor... 56 4e-08
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 55 7e-08
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 54 2e-07
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 54 2e-07
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 54 2e-07
gi|119395750 keratin 1 [Homo sapiens] 52 5e-07
gi|238859557 regulatory factor X1 [Homo sapiens] 52 5e-07
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 52 5e-07
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 52 5e-07
gi|239741182 PREDICTED: hypothetical protein XP_002342129 [Homo ... 51 1e-06
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 51 1e-06
gi|12056465 fibrillarin [Homo sapiens] 51 1e-06
gi|55956899 keratin 9 [Homo sapiens] 50 2e-06
gi|116325989 hyperpolarization activated cyclic nucleotide-gated... 50 3e-06
gi|122937424 one cut homeobox 3 [Homo sapiens] 50 3e-06
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 50 3e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 50 3e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 50 3e-06
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 49 4e-06
gi|4502565 calpain, small subunit 1 [Homo sapiens] 49 4e-06
gi|51599151 calpain, small subunit 1 [Homo sapiens] 49 4e-06
gi|195972866 keratin 10 [Homo sapiens] 49 5e-06
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 49 7e-06
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 578 bits (1489), Expect = e-165
Identities = 286/286 (100%), Positives = 286/286 (100%)
Query: 1 MGYECLRGQRCADKAGSAESEENRNFLLMRPGQRTAPAGSPTTPRPENDPSREIGEARAS 60
MGYECLRGQRCADKAGSAESEENRNFLLMRPGQRTAPAGSPTTPRPENDPSREIGEARAS
Sbjct: 1 MGYECLRGQRCADKAGSAESEENRNFLLMRPGQRTAPAGSPTTPRPENDPSREIGEARAS 60
Query: 61 GQDQVLPTHPAPCHSYPTRLPDRHPRPPAPAPAPRERARGLRLRTVVGVAGVLVERDDLH 120
GQDQVLPTHPAPCHSYPTRLPDRHPRPPAPAPAPRERARGLRLRTVVGVAGVLVERDDLH
Sbjct: 61 GQDQVLPTHPAPCHSYPTRLPDRHPRPPAPAPAPRERARGLRLRTVVGVAGVLVERDDLH 120
Query: 121 ALLAIQVIVQLLCAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGG 180
ALLAIQVIVQLLCAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGG
Sbjct: 121 ALLAIQVIVQLLCAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGG 180
Query: 181 GGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETRGAAALER 240
GGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETRGAAALER
Sbjct: 181 GGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETRGAAALER 240
Query: 241 ACASVREELLPVLQFSEPGKRAVQTSSGSHSGCFDVGWKRVRPKMF 286
ACASVREELLPVLQFSEPGKRAVQTSSGSHSGCFDVGWKRVRPKMF
Sbjct: 241 ACASVREELLPVLQFSEPGKRAVQTSSGSHSGCFDVGWKRVRPKMF 286
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 560 bits (1442), Expect = e-160
Identities = 280/286 (97%), Positives = 280/286 (97%), Gaps = 2/286 (0%)
Query: 1 MGYECLRGQRCADKAGSAESEENRNFLLMRPGQRTAPAGSPTTPRPENDPSREIGEARAS 60
MGYECLRGQRCADKAGSAESEENRNFLLMRPGQRTAPAGSPTTPRPENDPSREIGEARAS
Sbjct: 1 MGYECLRGQRCADKAGSAESEENRNFLLMRPGQRTAPAGSPTTPRPENDPSREIGEARAS 60
Query: 61 GQDQVLPTHPAPCHSYPTRLPDRHPRPPAPAPAPRERARGLRLRTVVGVAGVLVERDDLH 120
GQDQVLPTHPAPCHSYPTRLPDRHPRPPAPAPAPRERARGLRLRTVVGVAGVLVERDDLH
Sbjct: 61 GQDQVLPTHPAPCHSYPTRLPDRHPRPPAPAPAPRERARGLRLRTVVGVAGVLVERDDLH 120
Query: 121 ALLAIQVIVQLLCAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGG 180
ALLAIQVIVQLLCAAAEARGAATLPAAAATTTALDGPGAGGGAE G GRSSAGGGGG
Sbjct: 121 ALLAIQVIVQLLCAAAEARGAATLPAAAATTTALDGPGAGGGAERG--GSGRSSAGGGGG 178
Query: 181 GGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETRGAAALER 240
GGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQET GAAALER
Sbjct: 179 GGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETSGAAALER 238
Query: 241 ACASVREELLPVLQFSEPGKRAVQTSSGSHSGCFDVGWKRVRPKMF 286
ACASVREELLPVLQFSEPGKRAVQTSSGSHSGCFDVGWKRVRPKMF
Sbjct: 239 ACASVREELLPVLQFSEPGKRAVQTSSGSHSGCFDVGWKRVRPKMF 284
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 60.1 bits (144), Expect = 2e-09
Identities = 34/70 (48%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 132 LCAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGG-GGGGGGGRGS 190
L AA A AA AAAA + G G+G G GGG S GGGGG GGGGGG G
Sbjct: 453 LSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGG 512
Query: 191 RRGRGGGERG 200
G GG G
Sbjct: 513 GSGTAGGHSG 522
Score = 48.1 bits (113), Expect = 9e-06
Identities = 33/75 (44%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 131 LLCAAAEARGAATL-PAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGG-GG--GGGG 186
L+ +AE + ++ L PAAAA A A A GGG S G GGG GG G GG
Sbjct: 440 LVSPSAEPQSSSNLSPAAAAAAAA--AAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGG 497
Query: 187 GRGSRRGRGGGERGG 201
G G G GGG GG
Sbjct: 498 GGGGAGGGGGGSSGG 512
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 56.6 bits (135), Expect = 2e-08
Identities = 34/71 (47%), Positives = 38/71 (53%), Gaps = 16/71 (22%)
Query: 142 ATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGG-----------RGS 190
A+ AAAAT T+ G G GGG+ GGG S+G GGGGGGGGGG GS
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGS-----GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS 115
Query: 191 RRGRGGGERGG 201
G GG GG
Sbjct: 116 GGGGGGISAGG 126
Score = 48.1 bits (113), Expect = 9e-06
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 132 LCAAAEARGAATLPAAAATTTALD-GPGAGGG---------AEAQFLGGGRSSAGGGGGG 181
+ +A + G T ++A ++ A GP A G A A +S GGGGGG
Sbjct: 20 ISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGG 79
Query: 182 GGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRG 218
GG GGG GS GGG GG + +A G G
Sbjct: 80 GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSG 116
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 56.6 bits (135), Expect = 2e-08
Identities = 34/71 (47%), Positives = 38/71 (53%), Gaps = 16/71 (22%)
Query: 142 ATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGG-----------RGS 190
A+ AAAAT T+ G G GGG+ GGG S+G GGGGGGGGGG GS
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGS-----GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS 115
Query: 191 RRGRGGGERGG 201
G GG GG
Sbjct: 116 GGGGGGISAGG 126
Score = 48.1 bits (113), Expect = 9e-06
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 132 LCAAAEARGAATLPAAAATTTALD-GPGAGGG---------AEAQFLGGGRSSAGGGGGG 181
+ +A + G T ++A ++ A GP A G A A +S GGGGGG
Sbjct: 20 ISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGG 79
Query: 182 GGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRG 218
GG GGG GS GGG GG + +A G G
Sbjct: 80 GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSG 116
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 56.6 bits (135), Expect = 2e-08
Identities = 34/71 (47%), Positives = 38/71 (53%), Gaps = 16/71 (22%)
Query: 142 ATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGG-----------RGS 190
A+ AAAAT T+ G G GGG+ GGG S+G GGGGGGGGGG GS
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGS-----GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS 115
Query: 191 RRGRGGGERGG 201
G GG GG
Sbjct: 116 GGGGGGISAGG 126
Score = 48.1 bits (113), Expect = 9e-06
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 132 LCAAAEARGAATLPAAAATTTALD-GPGAGGG---------AEAQFLGGGRSSAGGGGGG 181
+ +A + G T ++A ++ A GP A G A A +S GGGGGG
Sbjct: 20 ISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGG 79
Query: 182 GGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRG 218
GG GGG GS GGG GG + +A G G
Sbjct: 80 GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSG 116
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 56.2 bits (134), Expect = 3e-08
Identities = 37/90 (41%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 134 AAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRS---------------SAGGG 178
AA+ A AA AAA++ A P +GG A L S S GGG
Sbjct: 356 AASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSRGGG 415
Query: 179 GGGGGGGGGRGSRRGRGGGERGGPRAQAVR 208
GGGGGGGGG G G GGG G A A R
Sbjct: 416 GGGGGGGGGGGGGAGAGGGSDFGCSAAAPR 445
Score = 42.4 bits (98), Expect = 5e-04
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 131 LLCAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGS 190
L C ++++ AA AAA AL G GGG GGG GGGG G GGG G
Sbjct: 390 LSCHSSQSAAAA----AAAAAAALGSRGGGGG------GGGGGGGGGGGAGAGGGSDFGC 439
Query: 191 RRGRGGGERG 200
E G
Sbjct: 440 SAAAPRSESG 449
Score = 33.1 bits (74), Expect = 0.29
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 139 RGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGG 187
+G A +AA TTT+ G G G L GG +GG GG G G
Sbjct: 142 KGYAESGSAAGTTTSASGSGLGS------LHGGSGGSGGSAALGGSGSG 184
Score = 31.6 bits (70), Expect = 0.84
Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 11/116 (9%)
Query: 134 AAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRG 193
AAAEA ++ + + + G GA E G S + G G G GS G
Sbjct: 108 AAAEADMSSDVEVGCSALRSPGGLGAAQLKENNGKGYAESGSAAGTTTSASGSGLGSLHG 167
Query: 194 RGGGERG-------GPRAQAVRRRLSALRGRGRRRRLKRLRRAQETRGAAALERAC 242
GG G G A VRR +A R ++ RL + + R C
Sbjct: 168 GSGGSGGSAALGGSGSGADQVRRYRTAF----TREQIARLEKEFYRENYVSRPRRC 219
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 55.8 bits (133), Expect = 4e-08
Identities = 32/64 (50%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGG-GGGGGGRGSRRGRGGGERGGPRAQAVRRRLSAL 214
G G GGG GGGR GGGGGG GGGGGG G G GGG RGG + +
Sbjct: 340 GGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGY 399
Query: 215 RGRG 218
GRG
Sbjct: 400 GGRG 403
Score = 45.4 bits (106), Expect = 6e-05
Identities = 22/42 (52%), Positives = 23/42 (54%)
Query: 160 GGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
GGG + GGG GGGGGGGG GG G G GG GG
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGG 372
Score = 45.4 bits (106), Expect = 6e-05
Identities = 23/42 (54%), Positives = 23/42 (54%)
Query: 160 GGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
GGG GGG GGGGGGGG GG G G GGG GG
Sbjct: 332 GGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGG 373
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/66 (42%), Positives = 29/66 (43%), Gaps = 19/66 (28%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGG----GGGGR---------------GSRRGRGG 196
G G GGG + GGG GGGGGGGG GGGGR G R G GG
Sbjct: 348 GGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGG 407
Query: 197 GERGGP 202
G P
Sbjct: 408 RGYGDP 413
Score = 42.0 bits (97), Expect = 6e-04
Identities = 22/44 (50%), Positives = 22/44 (50%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G GGG F G G GG GG GG GGRG GGG GG
Sbjct: 378 GGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGG 421
Score = 40.4 bits (93), Expect = 0.002
Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 172 RSSAGGGGGG-GGGGGGRGSRRGRGGGERGG 201
R GGG GG GGGGGG G G GGG RGG
Sbjct: 328 RQEGGGGRGGWGGGGGGGGRGGGGGGGGRGG 358
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/35 (57%), Positives = 20/35 (57%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRR 192
G GG G G GGGGGGGGGGGG G RR
Sbjct: 398 GYGGRGGYGGRGYGDPYGGGGGGGGGGGGGGGYRR 432
Score = 37.4 bits (85), Expect = 0.015
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGG 187
G G GG + G GGGGGGGGGGGG
Sbjct: 398 GYGGRGGYGGRGYGDPYGGGGGGGGGGGGGGG 429
Score = 37.0 bits (84), Expect = 0.020
Identities = 17/26 (65%), Positives = 17/26 (65%)
Query: 178 GGGGGGGGGGRGSRRGRGGGERGGPR 203
GGGG GG GG G GRGGG GG R
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGR 356
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 55.1 bits (131), Expect = 7e-08
Identities = 32/62 (51%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 140 GAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGER 199
GA AAA A DGPG GGG GG GGG GGGGGGG G G GGG
Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGP------GGGGGPGGGPGGGGGGGPGGGGGGPGGGLL 183
Query: 200 GG 201
GG
Sbjct: 184 GG 185
Score = 45.8 bits (107), Expect = 4e-05
Identities = 24/44 (54%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 159 AGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGP 202
AG G GGG + G GGGGG GGGG G G GGG GGP
Sbjct: 129 AGAGGAGAAAGGGGAHDGPGGGGGPGGGG-GPGGGPGGGGGGGP 171
Score = 34.7 bits (78), Expect = 0.099
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 168 LGGGRSSAGGGGGGG------GGGGGRGSRRGRGGGERGG 201
L G AG GGG GGGGG G G GGG GG
Sbjct: 127 LMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGG 166
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 53.9 bits (128), Expect = 2e-07
Identities = 32/73 (43%), Positives = 36/73 (49%), Gaps = 20/73 (27%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGG--------------GGGRGSRRGRGGGER-- 199
G G+GG + G GR +GGGGGGGGG GGGRG R G GG +R
Sbjct: 202 GGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGG 261
Query: 200 ----GGPRAQAVR 208
GGPR Q R
Sbjct: 262 FNKFGGPRDQGSR 274
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRA 204
G G G G + GG GG GGGG GGGGRG GGG G RA
Sbjct: 378 GGGNGRGGRGR---GGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRA 423
Score = 43.1 bits (100), Expect = 3e-04
Identities = 25/53 (47%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 155 DGPGAG------GGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
DGPG G GG GGR GG G GG G R GRGGG+RGG
Sbjct: 453 DGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGG 505
Score = 42.7 bits (99), Expect = 4e-04
Identities = 29/63 (46%), Positives = 30/63 (47%), Gaps = 18/63 (28%)
Query: 156 GPGAGGGAEAQFLGGG--------RSSAGGGGGGGGGGGGRG---------SRRGRGGGE 198
G G G G + Q GGG R G GG GGGGGGG G RGRGGG
Sbjct: 189 GSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGG- 247
Query: 199 RGG 201
RGG
Sbjct: 248 RGG 250
Score = 39.7 bits (91), Expect = 0.003
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
Query: 156 GPGAGGGA-----EAQFLGGGRSSAGGG-----GGGGGGGGGRGSRRGRGGGERGG 201
G G GGG ++ GG S G G GGGG GG G+ R GRG G GG
Sbjct: 168 GGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGG 223
Score = 39.7 bits (91), Expect = 0.003
Identities = 22/49 (44%), Positives = 23/49 (46%)
Query: 149 ATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG 197
AT A G G G + GG G GGGG GGGG G G GGG
Sbjct: 369 ATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGG 417
Score = 38.1 bits (87), Expect = 0.009
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 157 PGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRG-SRRGRGGGERGG 201
P G G + Q+ SS GGGGGGGGG G+ S GGG GG
Sbjct: 151 PPQGYGQQNQY---NSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGG 193
Score = 38.1 bits (87), Expect = 0.009
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 139 RGAATL-----PAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRG 193
+G AT+ P+A A DG G R+ GGG G GG GRG G
Sbjct: 334 KGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG 393
Query: 194 RGGGERGG 201
RGG GG
Sbjct: 394 RGGYGGGG 401
Score = 37.7 bits (86), Expect = 0.012
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGG--------GGGGRG--SRRGRGGGERGG 201
G G GGG + G +SS GGG GG GGGG G ++ RGG RGG
Sbjct: 166 GGGGGGGGGGNY-GQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGG 220
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 53.5 bits (127), Expect = 2e-07
Identities = 47/131 (35%), Positives = 58/131 (44%), Gaps = 28/131 (21%)
Query: 142 ATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG---- 197
A P AA + A G GAGG GGG ++ GGGGGGGGGGG G G GG
Sbjct: 197 AGAPGAAGSAAASAG-GAGGA------GGGGPASAGGGGGGGGGGGGGGAAGAGGALHPH 249
Query: 198 -ERGGPR-----------AQAVRRRLSALRGRGRRR--RLKRLRRAQETRGAAALERACA 243
GG +VR LRG + RLK+ RR + RG A ++C
Sbjct: 250 HAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYA---QSCR 306
Query: 244 SVREELLPVLQ 254
R + VL+
Sbjct: 307 FKRVQQRHVLE 317
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 53.5 bits (127), Expect = 2e-07
Identities = 47/131 (35%), Positives = 58/131 (44%), Gaps = 28/131 (21%)
Query: 142 ATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG---- 197
A P AA + A G GAGG GGG ++ GGGGGGGGGGG G G GG
Sbjct: 197 AGAPGAAGSAAASAG-GAGGA------GGGGPASAGGGGGGGGGGGGGGAAGAGGALHPH 249
Query: 198 -ERGGPR-----------AQAVRRRLSALRGRGRRR--RLKRLRRAQETRGAAALERACA 243
GG +VR LRG + RLK+ RR + RG A ++C
Sbjct: 250 HAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYA---QSCR 306
Query: 244 SVREELLPVLQ 254
R + VL+
Sbjct: 307 FKRVQQRHVLE 317
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 52.4 bits (124), Expect = 5e-07
Identities = 25/46 (54%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG + G G SS G GG GGGGGG RG GGG GG
Sbjct: 567 GSGGGGGGHGSY-GSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGG 611
Score = 45.4 bits (106), Expect = 6e-05
Identities = 24/46 (52%), Positives = 24/46 (52%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG GGG GG GGGG GGGG G GGG GG
Sbjct: 87 GSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGG 132
Score = 45.4 bits (106), Expect = 6e-05
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 135 AAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGG--GGGGGGGGGRGSRR 192
+ E ++ + + TT G GGG GG +GGG G GGGGGGGRGS
Sbjct: 494 SGECAPNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGS-Y 552
Query: 193 GRGGGERG 200
G GG G
Sbjct: 553 GSGGSSYG 560
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/51 (50%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGG---GGGGGGRGS--RRGRGGGERGG 201
G G GGG G G SS G GGG GGGGGG GS GG RGG
Sbjct: 540 GSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGG 590
Score = 43.9 bits (102), Expect = 2e-04
Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 14/75 (18%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGG--GGGGGGGGRGSR------------RGRGGGERGGPR 203
G GGG + GG S GGG G GGGGGG GS G GGG G R
Sbjct: 543 GGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGR 602
Query: 204 AQAVRRRLSALRGRG 218
++ GRG
Sbjct: 603 GSGGGSSGGSIGGRG 617
Score = 42.7 bits (99), Expect = 4e-04
Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 156 GPGAGGGAEAQFLGGGR-SSAGGGGGGGGGGGGRGSRRGRGGGERG 200
G G G G + GGG S GGGGGG G G GS G GGG G
Sbjct: 522 GGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYG 567
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/46 (52%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG F GGG G GGGG GGGG G G GG GG
Sbjct: 91 GGGYGGGG---FGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGG 133
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/46 (50%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG GGG GG GG G GGGG G GGG GG
Sbjct: 101 GGGFGGGG----FGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGG 142
Score = 39.7 bits (91), Expect = 0.003
Identities = 22/43 (51%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 159 AGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
A GG GGG G GGGG GGGG G G GGG GG
Sbjct: 81 ARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGG--GIGGGGFGG 121
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/41 (51%), Positives = 21/41 (51%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGG 196
G G GGG F GG GGG GGGG GGG G GG
Sbjct: 111 GGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPPGG 151
Score = 39.3 bits (90), Expect = 0.004
Identities = 23/46 (50%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG GGG GG GGGG GG G G GGG GG
Sbjct: 96 GGGFGGGG----FGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGG 137
Score = 39.3 bits (90), Expect = 0.004
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVR 208
G +GG GGG SS G G GGG GG G R GG + + +V+
Sbjct: 581 GSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSSVK 633
Score = 38.9 bits (89), Expect = 0.005
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGG---GGGRGSRRGRGGGERGG 201
G G G G + GGG G GGGG GG GGG G GGG GG
Sbjct: 83 GGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGG 131
Score = 37.4 bits (85), Expect = 0.015
Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 140 GAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRR------- 192
G+A + TT+ +GGG GG SS GGGGG G GGG GSR
Sbjct: 20 GSAGIINYQRRTTSSSTRRSGGG------GGRFSSCGGGGGSFGAGGGFGSRSLVNLGGS 73
Query: 193 -------GRGGGERGG 201
RGGG G
Sbjct: 74 KSISISVARGGGRGSG 89
Score = 37.0 bits (84), Expect = 0.020
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 168 LGGGRSSAGGGGGGGGGG---GGRGSRRGRGGGERGG 201
+ GG S GGGGG G GG G G G GGG GG
Sbjct: 512 ISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG 548
Score = 35.8 bits (81), Expect = 0.044
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 14/60 (23%)
Query: 156 GPGAGGGAEAQF-------------LGGGRSSA-GGGGGGGGGGGGRGSRRGRGGGERGG 201
G G G G+ + GGGR S GGG GGGG GGG G GGG GG
Sbjct: 57 GAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGG 116
Score = 28.5 bits (62), Expect = 7.1
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Query: 172 RSSAGGG-----GGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGR 219
RS GGG GGGGG G G R GG ++ ++ S RG GR
Sbjct: 38 RSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISI----SVARGGGR 86
Score = 28.1 bits (61), Expect = 9.2
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 156 GPGAGGG---AEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERG 200
G +GGG A + R + GGGGGR S G GGG G
Sbjct: 10 GYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFG 57
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 52.4 bits (124), Expect = 5e-07
Identities = 33/78 (42%), Positives = 38/78 (48%), Gaps = 18/78 (23%)
Query: 137 EARGAATLPAAAATTTALDGPGA-----------------GGGAEAQFLGGGRSSAGGGG 179
EA G AT + AT+ A+ G+ G GA + GGG S GGGG
Sbjct: 333 EAAGTATQVSTPATSQAVASSGSMPMYVSGSQVVASSTSTGAGA-SNSSGGGGSGGGGGG 391
Query: 180 GGGGGGGGRGSRRGRGGG 197
GGGGGGGG GS G G G
Sbjct: 392 GGGGGGGGSGSTGGGGSG 409
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 141 AATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGG 196
A++ A + + G G+GGG GGG GG G GGGG G G+ +GG
Sbjct: 367 ASSTSTGAGASNSSGGGGSGGGGG----GGGGGGGGGSGSTGGGGSGAGTYVIQGG 418
Score = 34.3 bits (77), Expect = 0.13
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 134 AAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGG 184
+ ++ ++T A A+ ++ G GGG GGG S + GGGG G G
Sbjct: 361 SGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAG 411
>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 52.4 bits (124), Expect = 5e-07
Identities = 33/63 (52%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALR 215
GP GGG + GGGR GGG GGG GGG RG R G GGG RGG R R
Sbjct: 166 GPPRGGGRGGR--GGGRG--GGGRGGGRGGGFRGGRGGGGGGFRGG--------RGGGFR 213
Query: 216 GRG 218
GRG
Sbjct: 214 GRG 216
Score = 44.3 bits (103), Expect = 1e-04
Identities = 25/48 (52%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPR 203
G GGG GG + GGGGGGGGG RG GRGG RGG R
Sbjct: 10 GFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG--GRGGFGRGGGR 55
Score = 42.0 bits (97), Expect = 6e-04
Identities = 28/53 (52%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
Query: 158 GAGGGAEAQFLGGGRSS---AGGGGGGGGG--GGGRGSRRGRGGGERGGPRAQ 205
G GGG F GG S+ GGGGGGGG GGGRG GRGGG G + Q
Sbjct: 14 GGGGGG---FNRGGSSNHFRGGGGGGGGGNFRGGGRGG-FGRGGGRGGFNKGQ 62
Score = 42.0 bits (97), Expect = 6e-04
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 13/61 (21%)
Query: 156 GPGAG---GGAEAQFLGGGRSSAGGGGGG---GGGGGGRGSRRGRGGGERG---GPRAQA 206
G G G GG+ F GGG GGGGGG GGG GG G GRGG +G GP +
Sbjct: 15 GGGGGFNRGGSSNHFRGGG----GGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPPERV 70
Query: 207 V 207
V
Sbjct: 71 V 71
Score = 35.8 bits (81), Expect = 0.044
Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 170 GGRSSAGGGGGG--GGGGGGRGSRRGRGGGERGG 201
G + GGG G GGG GG G GRGGG RGG
Sbjct: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG 196
Score = 30.8 bits (68), Expect = 1.4
Identities = 21/36 (58%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
Query: 173 SSAGGGGGG---GGGGGG--RG--SRRGRGGGERGG 201
S GGG GG GGGGGG RG S RGGG GG
Sbjct: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG 37
>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 52.4 bits (124), Expect = 5e-07
Identities = 33/63 (52%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALR 215
GP GGG + GGGR GGG GGG GGG RG R G GGG RGG R R
Sbjct: 166 GPPRGGGRGGR--GGGRG--GGGRGGGRGGGFRGGRGGGGGGFRGG--------RGGGFR 213
Query: 216 GRG 218
GRG
Sbjct: 214 GRG 216
Score = 44.3 bits (103), Expect = 1e-04
Identities = 25/48 (52%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPR 203
G GGG GG + GGGGGGGGG RG GRGG RGG R
Sbjct: 10 GFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG--GRGGFGRGGGR 55
Score = 42.0 bits (97), Expect = 6e-04
Identities = 28/53 (52%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
Query: 158 GAGGGAEAQFLGGGRSS---AGGGGGGGGG--GGGRGSRRGRGGGERGGPRAQ 205
G GGG F GG S+ GGGGGGGG GGGRG GRGGG G + Q
Sbjct: 14 GGGGGG---FNRGGSSNHFRGGGGGGGGGNFRGGGRGG-FGRGGGRGGFNKGQ 62
Score = 42.0 bits (97), Expect = 6e-04
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 13/61 (21%)
Query: 156 GPGAG---GGAEAQFLGGGRSSAGGGGGG---GGGGGGRGSRRGRGGGERG---GPRAQA 206
G G G GG+ F GGG GGGGGG GGG GG G GRGG +G GP +
Sbjct: 15 GGGGGFNRGGSSNHFRGGG----GGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPPERV 70
Query: 207 V 207
V
Sbjct: 71 V 71
Score = 35.8 bits (81), Expect = 0.044
Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 170 GGRSSAGGGGGG--GGGGGGRGSRRGRGGGERGG 201
G + GGG G GGG GG G GRGGG RGG
Sbjct: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG 196
Score = 30.8 bits (68), Expect = 1.4
Identities = 21/36 (58%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
Query: 173 SSAGGGGGG---GGGGGG--RG--SRRGRGGGERGG 201
S GGG GG GGGGGG RG S RGGG GG
Sbjct: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG 37
>gi|239741182 PREDICTED: hypothetical protein XP_002342129 [Homo
sapiens]
Length = 211
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/57 (54%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 157 PGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG---ERGGPRAQAVRRR 210
PG GGA + GGRS GGGGG GGGGGGR +RGR R G RA RRR
Sbjct: 12 PGTPGGAGS----GGRSLRGGGGGAGGGGGGR-EKRGRPESPRRRRSGERASPARRR 63
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Query: 147 AAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQA 206
A T G G G+ + L GG AGGGGGG G S R R GER P A
Sbjct: 4 AGRTKEGEPGTPGGAGSGGRSLRGGGGGAGGGGGGREKRGRPESPRRRRSGERASP---A 60
Query: 207 VRRRLSALRGRGRRRRLKRLRRAQETRGAAALERACASVREELLPV 252
RR A GR R+ + T L A LPV
Sbjct: 61 RRRGPGATTRPGRWSLGSVFRKGEGTWRRRRLLAAADPRASPCLPV 106
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 51.2 bits (121), Expect = 1e-06
Identities = 23/52 (44%), Positives = 25/52 (48%)
Query: 145 PAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGG 196
P+ + L G G GGG GG AGGGGGGGGG G R G G
Sbjct: 313 PSKGSVAAGLAGAGGGGGGAVGAFGGAAGGAGGGGGGGGGAGAERDRGGASG 364
Score = 35.4 bits (80), Expect = 0.058
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 136 AEARGAATLPAAAATTTALDGPGAGGGAEAQFL-----GGGRSSAGGGGGGGGGGGG--- 187
+ +R + P+ A+ GPG + + G +AG G GGGGGG
Sbjct: 276 SSSRSSEPSPSRDASPGGPGGPGFASTDISMYTLSRDPSKGSVAAGLAGAGGGGGGAVGA 335
Query: 188 -RGSRRGRGGGERGGPRAQAVRRR 210
G+ G GGG GG A A R R
Sbjct: 336 FGGAAGGAGGGGGGGGGAGAERDR 359
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 50.8 bits (120), Expect = 1e-06
Identities = 31/66 (46%), Positives = 32/66 (48%), Gaps = 16/66 (24%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALR 215
G G G G F G GR GGGGGGGGGGGGRG GG RG R
Sbjct: 29 GFGGGRGRGGGFRGRGRG--GGGGGGGGGGGGRGGGGFHSGGNRG--------------R 72
Query: 216 GRGRRR 221
GRG +R
Sbjct: 73 GRGGKR 78
Score = 47.8 bits (112), Expect = 1e-05
Identities = 27/54 (50%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGG-GGGGGGGRGSRRGRG-GGERGGPRAQAV 207
G G GGG + GGG GGGGG GGGG G RGRG GG+RG + V
Sbjct: 33 GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKNV 86
Score = 42.0 bits (97), Expect = 6e-04
Identities = 31/70 (44%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 158 GAGGGAEAQFLG-GGRSSAGG-GGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALR 215
G G G F GGR GG GGG G GGG RG RG GGG GG +
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGG 68
Query: 216 GRGRRRRLKR 225
RGR R KR
Sbjct: 69 NRGRGRGGKR 78
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/49 (51%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 171 GRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGR 219
G S GGG GG GG G RG R GRGG G R R RGRGR
Sbjct: 4 GFSPRGGGFGGRGGFGDRGGRGGRGGFGGG-------RGRGGGFRGRGR 45
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 50.4 bits (119), Expect = 2e-06
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 140 GAATLPAAAATTTALDGPGAGGGAEAQ-FLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGE 198
G ++ A L G G GG+ + GG S GGGG GGG GGG GSR G GG
Sbjct: 461 GQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSY 520
Query: 199 RGG 201
GG
Sbjct: 521 GGG 523
Score = 50.1 bits (118), Expect = 2e-06
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G+ GG+ + GGG S GG GGG GGG G G G GGG GG
Sbjct: 509 GSGSRGGSGGSY-GGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGG 553
Score = 47.0 bits (110), Expect = 2e-05
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 156 GPGAGGGAEAQF---LGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G+GGG+ + GGG S GGG GG GG G G GGG GG
Sbjct: 523 GSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571
Score = 47.0 bits (110), Expect = 2e-05
Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GG+ + GG S GGG GGG GGG GSR G GG GG
Sbjct: 547 GGGHSGGSGGNYGGG---SGSGGGSGGGYGGGSGSRGGSGGSHGGG 589
Score = 46.6 bits (109), Expect = 3e-05
Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 158 GAGGGAEAQFLGGGRSSAGGG--GGGGGGGGGRGSRRGRGGGERGG 201
G GG + GGG S GG GGG G GGG G G G G RGG
Sbjct: 536 GGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGG 581
Score = 45.1 bits (105), Expect = 7e-05
Identities = 24/48 (50%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGG--GGGGGGRGSRRGRGGGERGG 201
G GGG GGG S GG GG GG G G GS G GGG GG
Sbjct: 494 GGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGG 541
Score = 44.3 bits (103), Expect = 1e-04
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGG-GRGSRRGRGGGERGG 201
G G GGG+ ++ GG G G GGG GGG G GS G GG GG
Sbjct: 503 GGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGG 549
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G+GGG A LGGG G G GG GGG S G GGG GG
Sbjct: 74 GGGSGGGFSASSLGGG-FGGGSRGFGGASGGGYSSSGGFGGGFGGG 118
Score = 43.5 bits (101), Expect = 2e-04
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G+GGG+ + GGG S GG GG GGG G G G GG GG
Sbjct: 561 GSGSGGGSGGGY-GGGSGSRGGSGGSHGGGSGFG---GESGGSYGG 602
Score = 42.0 bits (97), Expect = 6e-04
Identities = 26/50 (52%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 156 GPGAGGGAEA--QFLGGGRSSAGGGGG--GGGGGGGRGSRRGRGGGERGG 201
G G GGG+ GGG SS+GG GG GGG GGG G G G G GG
Sbjct: 87 GGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGG 136
Score = 42.0 bits (97), Expect = 6e-04
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGG------GGGGGGRGSRRGRGGGERGG 201
G G+ GG+ + GGG GGG G G GGG GS G GGG GG
Sbjct: 486 GRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGG 537
Score = 41.6 bits (96), Expect = 8e-04
Identities = 21/46 (45%), Positives = 23/46 (50%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G GG + + GGG GGG GGG G G G G GGG GG
Sbjct: 99 GASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGG 144
Score = 38.5 bits (88), Expect = 0.007
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 162 GAEAQFLGGGRSSAG-GGGGGGGGGGGRGSRRGRGGGERGG 201
G + F G G GG GG GG GRGSR G GG GG
Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGG 500
Score = 36.6 bits (83), Expect = 0.026
Identities = 20/35 (57%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGG-GGGGGGGRG 189
G G GGG+ F GG S GG GG GGG GGG G
Sbjct: 112 GGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDG 146
Score = 35.8 bits (81), Expect = 0.044
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGS 190
G G+G G E+ GG A G GGG GGG G+ S
Sbjct: 587 GGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSS 621
Score = 35.4 bits (80), Expect = 0.058
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 158 GAGGGAEAQFLG-----GGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
GA GG + G GG S G GGG G G GG G G GG GG
Sbjct: 99 GASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGG 147
Score = 34.7 bits (78), Expect = 0.099
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGG----GGGGGGGRGSRRGRGGG 197
G G+GG + + S GGGGG G GGG GRGGG
Sbjct: 21 GLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGG 66
Score = 34.3 bits (77), Expect = 0.13
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 16/68 (23%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGG--------GGGGGRGSRRGRGG--------GER 199
G G G G + SS+GGGGGGG GGG R RG GG G
Sbjct: 19 GGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSG 78
Query: 200 GGPRAQAV 207
GG A ++
Sbjct: 79 GGFSASSL 86
Score = 33.1 bits (74), Expect = 0.29
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGG------GGGRG---SRRGRGGGERGGPR 203
G G GGG + G G S+ G GGGG GGG G S GGG GG R
Sbjct: 39 GGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR 95
Score = 33.1 bits (74), Expect = 0.29
Identities = 23/53 (43%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Query: 158 GAGGGAEAQFLGGGRSSAGG--GGGGGG-------GGGGRGSRRGRGGGERGG 201
G GGG+ GG S G GGG GG GGG G RG GG GG
Sbjct: 52 GYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGG 104
Score = 32.7 bits (73), Expect = 0.38
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 166 QFLGGGRSSAGGGGGGGGGGGG----RGSRRGRGGGERGGPR 203
QF S +GGGGGGG G GG SR GG GG R
Sbjct: 5 QFSSSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGR 46
Score = 30.8 bits (68), Expect = 1.4
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGG-GGGGGGRGSRRGRGGG 197
G G+ GG+ GGG G GG GGG GS G GGG
Sbjct: 575 GSGSRGGSGGSH-GGGSGFGGESGGSYGGGEEASGSGGGYGGG 616
Score = 29.6 bits (65), Expect = 3.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGR 194
G G G + F G S GGG G GGG G G+
Sbjct: 581 GSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK 619
>gi|116325989 hyperpolarization activated cyclic nucleotide-gated
potassium channel 1 [Homo sapiens]
Length = 890
Score = 49.7 bits (117), Expect = 3e-06
Identities = 29/68 (42%), Positives = 33/68 (48%)
Query: 138 ARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG 197
A+ +AT AA L P GGGA A+ G GGGGGGGGGG G G
Sbjct: 23 AKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFE 82
Query: 198 ERGGPRAQ 205
+ GPR Q
Sbjct: 83 DAEGPRRQ 90
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 49.7 bits (117), Expect = 3e-06
Identities = 62/192 (32%), Positives = 77/192 (40%), Gaps = 25/192 (13%)
Query: 31 PGQRTAPA--GSPTTPRPENDPSREIGEARASGQDQVLPTHPAPCHSYPTRLPDR---HP 85
P QR A + GS T R E +G + LP +P P LP P
Sbjct: 156 PPQRLAASVSGSFTLMRDERAALASVGHLYGP-YGKELPAMGSPLSPLPNALPPALHGAP 214
Query: 86 RPPAPAPAPRERARGLRLRTVVGVAGVLVERDDLHALLAIQVIVQLLCAAAEARGAATLP 145
+PP P P P A G +AG D L A + LL A +A A LP
Sbjct: 215 QPPPPPPPPPLAAYG----PPGHLAG-----DKLLPPAAFEPHAALLGRAEDAL-ARGLP 264
Query: 146 AAAATTTALDGPGAGGGAEAQFLG--GGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPR 203
T + GAG G+ A L GG ++AG G GGGGG GS GGG G
Sbjct: 265 GGGGGTGS---GGAGSGSAAGLLAPLGGLAAAGAHGPHGGGGGPGGS----GGGPSAGAA 317
Query: 204 AQAVRRRLSALR 215
A+ + + A R
Sbjct: 318 AEEINTKEVAQR 329
Score = 39.7 bits (91), Expect = 0.003
Identities = 25/54 (46%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 146 AAAATTTALDGPGAGGGAEAQFLGGGRSSA--GGGGGGGGGGGGRGSRRGRGGG 197
+AAA L PG G L G +S GGGGGGGGG GG G GGG
Sbjct: 30 SAAAQHRGLVAPGRPG------LVAGMASLLDGGGGGGGGGAGGAGGAGSAGGG 77
Score = 32.0 bits (71), Expect = 0.64
Identities = 39/147 (26%), Positives = 46/147 (31%), Gaps = 39/147 (26%)
Query: 81 PDRHPRPPAPAPAPRERARGLRLRTVVGVAG-VLVERDDLHALLAIQVIVQLLCAAAEAR 139
P HP P A P P R V+G + RD+ AL ++ + A
Sbjct: 141 PHAHPHPAAAPPPPPPPQ-----RLAASVSGSFTLMRDERAALASVGHLYGPYGKELPAM 195
Query: 140 GAATLPAAAATTTALDG----------------------------PGAGGGAEAQFLGG- 170
G+ P A AL G P A A LG
Sbjct: 196 GSPLSPLPNALPPALHGAPQPPPPPPPPPLAAYGPPGHLAGDKLLPPAAFEPHAALLGRA 255
Query: 171 ----GRSSAGGGGGGGGGGGGRGSRRG 193
R GGGGG G GG G GS G
Sbjct: 256 EDALARGLPGGGGGTGSGGAGSGSAAG 282
Score = 30.4 bits (67), Expect = 1.9
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 134 AAAEARG--AATLPA-AAATTTALDGPGAGGGAEAQFLGGGRSSAGGG 178
AAA+ RG A P A + LDG G GGG A GG SAGGG
Sbjct: 31 AAAQHRGLVAPGRPGLVAGMASLLDGGGGGGGGGAGGAGGA-GSAGGG 77
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 49.7 bits (117), Expect = 3e-06
Identities = 30/62 (48%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 157 PGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRG 216
PGAGGG GGG GGGGGGG GGGG G G GG G A A +A G
Sbjct: 246 PGAGGG------GGG----GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Query: 217 RG 218
G
Sbjct: 296 GG 297
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRG-----SRRGRGGGERGGP 202
GAG GA A ++AGGGGGGG GG G S R +GGG GP
Sbjct: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP 324
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/73 (36%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 134 AAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGG-----RSSAGGGGGGGGGGGGR 188
A A GA + AAAA A G G GGG G G R GG G GGGG
Sbjct: 271 AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAA 330
Query: 189 GSRRGRGGGERGG 201
+ G GG
Sbjct: 331 SLSKAAAGSAAGG 343
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 49.7 bits (117), Expect = 3e-06
Identities = 30/62 (48%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 157 PGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRG 216
PGAGGG GGG GGGGGGG GGGG G G GG G A A +A G
Sbjct: 246 PGAGGG------GGG----GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Query: 217 RG 218
G
Sbjct: 296 GG 297
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRG-----SRRGRGGGERGGP 202
GAG GA A ++AGGGGGGG GG G S R +GGG GP
Sbjct: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP 324
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/73 (36%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 134 AAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGG-----RSSAGGGGGGGGGGGGR 188
A A GA + AAAA A G G GGG G G R GG G GGGG
Sbjct: 271 AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAA 330
Query: 189 GSRRGRGGGERGG 201
+ G GG
Sbjct: 331 SLSKAAAGSAAGG 343
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 49.7 bits (117), Expect = 3e-06
Identities = 30/62 (48%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 157 PGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRG 216
PGAGGG GGG GGGGGGG GGGG G G GG G A A +A G
Sbjct: 246 PGAGGG------GGG----GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Query: 217 RG 218
G
Sbjct: 296 GG 297
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRG-----SRRGRGGGERGGP 202
GAG GA A ++AGGGGGGG GG G S R +GGG GP
Sbjct: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP 324
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/73 (36%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 134 AAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGG-----RSSAGGGGGGGGGGGGR 188
A A GA + AAAA A G G GGG G G R GG G GGGG
Sbjct: 271 AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAA 330
Query: 189 GSRRGRGGGERGG 201
+ G GG
Sbjct: 331 SLSKAAAGSAAGG 343
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 49.3 bits (116), Expect = 4e-06
Identities = 43/145 (29%), Positives = 55/145 (37%), Gaps = 17/145 (11%)
Query: 74 HSYPTRLPDRHPRPPAPAPAPRERARG-LRLRTVVGVAGVLVERDDLHALLAIQVIVQLL 132
+++P L P PP P P R + L + A DL +L
Sbjct: 365 YNFPLALAGPPPPPPPPHPHARIKLENPLDYGSAWAAAAAQCRYGDLASLHGAG------ 418
Query: 133 CAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRR 192
AA G+ + A+++ T E Q G GGGGGGGGGGGG G
Sbjct: 419 -AAGPGSGSPSAAASSSWHTLFTAE------EGQLYG---PCGGGGGGGGGGGGGGGGGG 468
Query: 193 GRGGGERGGPRAQAVRRRLSALRGR 217
G GGGE G R L G+
Sbjct: 469 GGGGGEAGAVAPYGYTRPPQGLAGQ 493
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 49.3 bits (116), Expect = 4e-06
Identities = 26/42 (61%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG 197
G G GG LGG S AGGGGGGGGGGGG G G GGG
Sbjct: 17 GGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGG--GGGGG 56
Score = 47.4 bits (111), Expect = 1e-05
Identities = 29/62 (46%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 156 GPGAGGGAEAQFLG---GGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLS 212
G G GGG LG GG S GGGGGGGGGGG G GGG GG + + +S
Sbjct: 13 GGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGG-----GGGGGGGGGTAMRILGGVIS 67
Query: 213 AL 214
A+
Sbjct: 68 AI 69
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/54 (44%), Positives = 26/54 (48%)
Query: 154 LDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAV 207
L G G GGG GG + GG G GGGGG G G GGG GG A +
Sbjct: 8 LKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRI 61
Score = 35.8 bits (81), Expect = 0.044
Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 17/59 (28%)
Query: 167 FLGGGRSSAGGGGGGGGG-----------------GGGRGSRRGRGGGERGGPRAQAVR 208
FL GGGGGGGGG GGG G G GGG GG A+R
Sbjct: 2 FLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMR 60
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 49.3 bits (116), Expect = 4e-06
Identities = 26/42 (61%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGG 197
G G GG LGG S AGGGGGGGGGGGG G G GGG
Sbjct: 17 GGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGG--GGGGG 56
Score = 47.4 bits (111), Expect = 1e-05
Identities = 29/62 (46%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 156 GPGAGGGAEAQFLG---GGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLS 212
G G GGG LG GG S GGGGGGGGGGG G GGG GG + + +S
Sbjct: 13 GGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGG-----GGGGGGGGGTAMRILGGVIS 67
Query: 213 AL 214
A+
Sbjct: 68 AI 69
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/54 (44%), Positives = 26/54 (48%)
Query: 154 LDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAV 207
L G G GGG GG + GG G GGGGG G G GGG GG A +
Sbjct: 8 LKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRI 61
Score = 35.8 bits (81), Expect = 0.044
Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 17/59 (28%)
Query: 167 FLGGGRSSAGGGGGGGGG-----------------GGGRGSRRGRGGGERGGPRAQAVR 208
FL GGGGGGGGG GGG G G GGG GG A+R
Sbjct: 2 FLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMR 60
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 48.9 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 25/46 (54%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG+ GGG S G GGG GGG G S G GGG GG
Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGG 506
Score = 46.2 bits (108), Expect = 3e-05
Identities = 22/46 (47%), Positives = 24/46 (52%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG+ + GG S GGG GGGGGG G GG GG
Sbjct: 510 GGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGG 555
Score = 45.8 bits (107), Expect = 4e-05
Identities = 23/45 (51%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGG-GGGGGGGGRGSRRGRGGGERGG 201
G GG+ + GGG S GGGG GGG GGG S G GGG G
Sbjct: 520 GGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSG 564
Score = 45.1 bits (105), Expect = 7e-05
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G +GGG+ GGG + GGG GGG GG S G GGG G
Sbjct: 475 GGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSG 520
Score = 45.1 bits (105), Expect = 7e-05
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G +GGG+ GGG SS+GG GG GG G GS G GGG GG
Sbjct: 501 GGSSGGGSSGGGYGGG-SSSGGHGGSSSGGYGGGSSGGGGGGYGGG 545
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/46 (47%), Positives = 23/46 (50%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G +GGG GGG S G GGG GG G S G GGG GG
Sbjct: 492 GGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGG 537
Score = 42.4 bits (98), Expect = 5e-04
Identities = 20/47 (42%), Positives = 21/47 (44%)
Query: 155 DGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
+G GGG GGG GGG GGG G G GGG GG
Sbjct: 456 EGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGG 502
Score = 42.0 bits (97), Expect = 6e-04
Identities = 21/46 (45%), Positives = 22/46 (47%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG GG + GGG GGG GG S G GG GG
Sbjct: 484 GGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGG 529
Score = 41.6 bits (96), Expect = 8e-04
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG+ GGG S G GGG GG GG GGG GG
Sbjct: 470 GGGYGGGSS----GGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGG 511
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/47 (46%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGR-GGGERGGPR 203
G GGG GGG SS GG GGG GG + S G G GPR
Sbjct: 537 GGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPR 583
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G G GGG + + + S GGG GG GG SR GGG GG
Sbjct: 24 GCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGG 69
Score = 38.5 bits (88), Expect = 0.007
Identities = 22/46 (47%), Positives = 23/46 (50%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G GGG+ GG S GGG GGGG GGG G G GG G
Sbjct: 99 GGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSG 144
Score = 37.0 bits (84), Expect = 0.020
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G + GG+ GGG G GGG GGGG G G GGG GG
Sbjct: 90 GSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGG-GGFGGGFGGG 134
Score = 36.2 bits (82), Expect = 0.034
Identities = 18/34 (52%), Positives = 18/34 (52%)
Query: 168 LGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
L G SS GGG GGG GGG G GG GG
Sbjct: 453 LEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGG 486
Score = 35.4 bits (80), Expect = 0.058
Identities = 24/50 (48%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 154 LDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGG--GRGSRRGRGGGERGG 201
L+G G+ GG GGR GG GGG GGG G GS G GG GG
Sbjct: 453 LEGEGSSGG-------GGRG--GGSFGGGYGGGSSGGGSSGGGHGGGHGG 493
Score = 34.7 bits (78), Expect = 0.099
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 163 AEAQFLGGGRSSAGGGGGGGGGGGGRGSRR-GRGGGERGG 201
+ ++ RS GGGGGG GGGGG S R G GG
Sbjct: 6 SSSKHYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGG 45
Score = 33.9 bits (76), Expect = 0.17
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 158 GAGGGAEAQFLGG-GRSSAGGGGGGGGGGGGRGSRRGRGGGERG 200
G GGG+ GG G S+GGG GGG GG S G G
Sbjct: 529 GYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSG 572
Score = 33.5 bits (75), Expect = 0.22
Identities = 19/44 (43%), Positives = 20/44 (45%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G GG F G SS+ GG GG GGG GGG GG
Sbjct: 76 GLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGG 119
Score = 33.5 bits (75), Expect = 0.22
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 158 GAGGGAEAQFLGGGRSSAGG--GGGGGGGGGGRGSRRGRGGGERG 200
G+ GG+ GG S GG GGGG GGGG G G GG+ G
Sbjct: 96 GSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGG 140
Score = 32.3 bits (72), Expect = 0.49
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 156 GPGAGGGAEAQFLGGG--RSSAGGG--GGGGGGGGGRGSRRGRGGGERGG 201
G GG + F GG R S+GGG GG GG GG G G GGG G
Sbjct: 41 GSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLG---GFGGGSFRG 87
Score = 32.0 bits (71), Expect = 0.64
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 158 GAGGGA------EAQFLGGGRSSAGGGGGGGGG-GGGRGSRRGRGGGERGG 201
G GGG+ + F G S GGG GGG GGG G GGG GG
Sbjct: 79 GFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGG 129
Score = 31.6 bits (70), Expect = 0.84
Identities = 19/46 (41%), Positives = 20/46 (43%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
G +GG GGG GG GG GG G GS RG G G
Sbjct: 50 GGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFG 95
Score = 30.8 bits (68), Expect = 1.4
Identities = 18/44 (40%), Positives = 20/44 (45%)
Query: 156 GPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGER 199
G GGG+ GG GGG GGG GGG G G E+
Sbjct: 104 GGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEK 147
Score = 28.1 bits (61), Expect = 9.2
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 159 AGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGG 201
+GGG GG G GGG G G S G GG GG
Sbjct: 62 SGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGG 104
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 48.5 bits (114), Expect = 7e-06
Identities = 32/88 (36%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 158 GAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGR-------GGGERGGPRAQAVRRR 210
G+GGG GGG S+AGGGGGG GGG + GG GG +
Sbjct: 160 GSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLI 219
Query: 211 LSALRGRGRRRRLKRLRRAQETRGAAAL 238
L+ G G+ A E GAAAL
Sbjct: 220 LAGGGGGGKAAAAAAASFAAEQAGAAAL 247
Score = 39.3 bits (90), Expect = 0.004
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 170 GGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQA 206
G + GGGG GGGGGG S G GGG G A +
Sbjct: 155 GDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANS 191
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,665,932
Number of Sequences: 37866
Number of extensions: 884980
Number of successful extensions: 32737
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 771
Number of HSP's that attempted gapping in prelim test: 12198
Number of HSP's gapped (non-prelim): 9458
length of query: 286
length of database: 18,247,518
effective HSP length: 101
effective length of query: 185
effective length of database: 14,423,052
effective search space: 2668264620
effective search space used: 2668264620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.