LOC727969 19038

Name: LOC727969	Sequence: fasta or formatted (208aa)		NCBI GI: 239747012
Description: PREDICTED: similar to hCG1807781		Referenced in: Y-linked Genes
Other entries for this name: alt mRNA [208aa] PREDICTED: similar to TSPY-like 2 alt prot [208aa] PREDICTED: similar to hCG1807781
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.0 27 2 C cysteine 2.4 5 1 D aspartate 2.9 6 2 E glutamate 7.7 16 3 F phenylalanine 3.8 8 1 G glycine 7.2 15 2 H histidine 1.0 2 1 I isoleucine 2.4 5 2 K lysine 3.4 7 1 L leucine 11.5 24 2 M methionine 2.9 6 1 N asparagine 1.0 2 1 P proline 7.7 16 1 Q glutamine 6.2 13 1 R arginine 9.6 20 2 S serine 3.8 8 1 T threonine 3.4 7 1 V valine 7.7 16 2 W tryptophan 1.9 4 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1807781 LOC727969 1.000 PREDICTED: similar to TSPY-like 2 LOC727969 0.997 PREDICTED: similar to hCG1807781 LOC100289087 0.354 PREDICTED: hypothetical protein XP_002344239 LOC728403 0.354 PREDICTED: similar to Testis-specific Y-encoded pro... TSPY2 0.354 testis specific protein, Y-linked 2 TSPY1 0.346 testis specific protein, Y-linked 1 TSPY3 0.344 testis specific protein, Y-linked 3 LOC728395 0.336 PREDICTED: similar to testis specific protein, Y-li... LOC728132 0.328 PREDICTED: similar to testis specific protein, Y-li... LOC100288465 0.115 PREDICTED: hypothetical protein XP_002343910 LOC100289265 0.094 PREDICTED: hypothetical protein LOC100289265 0.094 PREDICTED: hypothetical protein XP_002344242 TSPYL1 0.092 TSPY-like 1 TSPYL4 0.084 TSPY-like 4 LOC100291283 0.079 PREDICTED: hypothetical protein XP_002348282 TSPYL5 0.076 TSPY-like 5 TSPYL6 0.069 TSPY-like 6 TSPYL2 0.066 TSPY-like 2 LOC100130208 0.061 PREDICTED: similar to CYorf16 protein LOC100130208 0.061 PREDICTED: hypothetical protein SET 0.025 SET translocation (myeloid leukemia-associated) iso... ZNF853 0.020 zinc finger protein 853 SET 0.020 SET translocation (myeloid leukemia-associated) iso... CCDC6 0.018 coiled-coil domain containing 6 AMPH 0.015 amphiphysin isoform 2 AMPH 0.015 amphiphysin isoform 1 XIRP2 0.013 xin actin-binding repeat containing 2 isoform 1 [Ho... CCDC88B 0.013 coiled-coil domain containing 88 KCNH2 0.010 voltage-gated potassium channel, subfamily H, member... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.