Guide to the Human Genome
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Name: TSPY3 Sequence: fasta or formatted (308aa) NCBI GI: 118026929
Description:

testis specific protein, Y-linked 3

Referenced in:

Testes and Sperm
Y-linked Genes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         30           2
 C cysteine            1.3          4           1
 D aspartate           3.2         10           2
 E glutamate          12.7         39           3
 F phenylalanine       3.6         11           2
 G glycine             5.2         16           1
 H histidine           2.3          7           2
 I isoleucine          3.2         10           1
 K lysine              3.9         12           1
 L leucine             8.1         25           3
 M methionine          3.2         10           1
 N asparagine          3.9         12           1
 P proline             5.5         17           2
 Q glutamine           5.2         16           2
 R arginine            7.8         24           3
 S serine              6.2         19           2
 T threonine           2.9          9           1
 V valine              7.5         23           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis specific protein, Y-linked 3 
LOC100289087          0.997   PREDICTED: hypothetical protein XP_002344239 
LOC728132             0.990   PREDICTED: similar to testis specific protein, Y-li...
TSPY1                 0.988   testis specific protein, Y-linked 1 
LOC728395             0.987   PREDICTED: similar to testis specific protein, Y-li...
TSPY2                 0.987   testis specific protein, Y-linked 2 
LOC728403             0.985   PREDICTED: similar to Testis-specific Y-encoded pro...
TSPYL1                0.296   TSPY-like 1 
TSPYL4                0.264   TSPY-like 4 
TSPYL2                0.247   TSPY-like 2 
TSPYL6                0.246   TSPY-like 6 
TSPYL5                0.234   TSPY-like 5 
LOC727969             0.227   PREDICTED: similar to hCG1807781 
LOC727969             0.227   PREDICTED: similar to TSPY-like 2 
LOC727969             0.227   PREDICTED: similar to hCG1807781 
SET                   0.209   SET translocation (myeloid leukemia-associated) iso...
SET                   0.200   SET translocation (myeloid leukemia-associated) iso...
LOC646817             0.194   PREDICTED: similar to SET translocation 
LOC646817             0.194   PREDICTED: similar to SET translocation 
LOC646817             0.194   PREDICTED: similar to SET translocation 
LOC100289265          0.173   PREDICTED: hypothetical protein 
LOC100289265          0.173   PREDICTED: hypothetical protein XP_002344242 
LOC389217             0.168   PREDICTED: similar to SET translocation 
LOC389217             0.168   PREDICTED: similar to SET translocation 
LOC389217             0.168   PREDICTED: similar to SET translocation 
LOC100288465          0.143   PREDICTED: hypothetical protein XP_002343910 
LOC100130208          0.098   PREDICTED: similar to CYorf16 protein 
LOC100130208          0.098   PREDICTED: hypothetical protein 
LOC100291283          0.098   PREDICTED: hypothetical protein XP_002348282 
LOC100292671          0.067   PREDICTED: similar to CYorf16 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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