Guide to the Human Genome
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Search of human proteins with 239747012

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239747012 PREDICTED: similar to hCG1807781 [Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752465 PREDICTED: similar to TSPY-like 2 [Homo sapiens]         418   e-117
gi|239747012 PREDICTED: similar to hCG1807781 [Homo sapiens]          418   e-117
gi|239757958 PREDICTED: similar to hCG1807781 [Homo sapiens]          417   e-117
gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo ...   164   6e-41
gi|239746996 PREDICTED: similar to Testis-specific Y-encoded pro...   164   6e-41
gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]       164   6e-41
gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]       161   4e-40
gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]       160   5e-40
gi|239746992 PREDICTED: similar to testis specific protein, Y-li...   157   6e-39
gi|239747006 PREDICTED: similar to testis specific protein, Y-li...   154   5e-38
gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo ...    70   1e-12
gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]            62   3e-10
gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo ...    62   3e-10
gi|62988322 TSPY-like 1 [Homo sapiens]                                 61   6e-10
gi|46094051 TSPY-like 4 [Homo sapiens]                                 58   7e-09
gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo ...    56   2e-08
gi|49410495 TSPY-like 5 [Homo sapiens]                                 55   4e-08
gi|146198777 TSPY-like 6 [Homo sapiens]                                52   3e-07
gi|11545835 TSPY-like 2 [Homo sapiens]                                 51   6e-07
gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]      49   3e-06
gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]            49   3e-06
gi|170763500 SET translocation (myeloid leukemia-associated) iso...    35   0.045
gi|221139761 zinc finger protein 853 [Homo sapiens]                    33   0.22 
gi|170763498 SET translocation (myeloid leukemia-associated) iso...    33   0.22 
gi|46852390 coiled-coil domain containing 6 [Homo sapiens]             32   0.50 
gi|21536423 amphiphysin isoform 2 [Homo sapiens]                       31   0.85 
gi|4502081 amphiphysin isoform 1 [Homo sapiens]                        31   0.85 
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho...    30   1.1  
gi|88196790 coiled-coil domain containing 88 [Homo sapiens]            30   1.5  
gi|26051271 voltage-gated potassium channel, subfamily H, member...    29   2.5  

>gi|239752465 PREDICTED: similar to TSPY-like 2 [Homo sapiens]
          Length = 208

 Score =  418 bits (1075), Expect = e-117
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MPAFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR 60
           MPAFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR
Sbjct: 1   MPAFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR 60

Query: 61  LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE 120
           LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE
Sbjct: 61  LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE 120

Query: 121 EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH 180
           EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH
Sbjct: 121 EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH 180

Query: 181 LDRRGAIIQSIPGFWANVVSFSVFLLPF 208
           LDRRGAIIQSIPGFWANVVSFSVFLLPF
Sbjct: 181 LDRRGAIIQSIPGFWANVVSFSVFLLPF 208


>gi|239747012 PREDICTED: similar to hCG1807781 [Homo sapiens]
          Length = 208

 Score =  418 bits (1075), Expect = e-117
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MPAFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR 60
           MPAFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR
Sbjct: 1   MPAFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR 60

Query: 61  LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE 120
           LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE
Sbjct: 61  LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE 120

Query: 121 EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH 180
           EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH
Sbjct: 121 EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH 180

Query: 181 LDRRGAIIQSIPGFWANVVSFSVFLLPF 208
           LDRRGAIIQSIPGFWANVVSFSVFLLPF
Sbjct: 181 LDRRGAIIQSIPGFWANVVSFSVFLLPF 208


>gi|239757958 PREDICTED: similar to hCG1807781 [Homo sapiens]
          Length = 208

 Score =  417 bits (1071), Expect = e-117
 Identities = 207/208 (99%), Positives = 207/208 (99%)

Query: 1   MPAFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR 60
           MP FPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR
Sbjct: 1   MPTFPKVTQPACAWMQRYLALALRASQSRLTPGGWDCRPALVGAAQGDAHRLALIGRRGR 60

Query: 61  LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE 120
           LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE
Sbjct: 61  LAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQREEATLKQETVLVLDDIMAEVGVMAEE 120

Query: 121 EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH 180
           EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH
Sbjct: 121 EALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPH 180

Query: 181 LDRRGAIIQSIPGFWANVVSFSVFLLPF 208
           LDRRGAIIQSIPGFWANVVSFSVFLLPF
Sbjct: 181 LDRRGAIIQSIPGFWANVVSFSVFLLPF 208


>gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo
           sapiens]
          Length = 308

 Score =  164 bits (414), Expect = 6e-41
 Identities = 85/112 (75%), Positives = 97/112 (86%), Gaps = 4/112 (3%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVER----QKDQRAQPGPGPMTPESALEEL 148
           + E+A L +E VL+LDDIMAEV V+AEEE LVER    Q+ Q+A PGPGPMTPESALEEL
Sbjct: 53  ESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEEL 112

Query: 149 LAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFWANVVS 200
           LAV+V LE VNAQARKAFSRQREKMERR KPHLDRRGA+IQS+PGFWANV++
Sbjct: 113 LAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIA 164


>gi|239746996 PREDICTED: similar to Testis-specific Y-encoded
           protein 1 [Homo sapiens]
          Length = 308

 Score =  164 bits (414), Expect = 6e-41
 Identities = 85/112 (75%), Positives = 97/112 (86%), Gaps = 4/112 (3%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVER----QKDQRAQPGPGPMTPESALEEL 148
           + E+A L +E VL+LDDIMAEV V+AEEE LVER    Q+ Q+A PGPGPMTPESALEEL
Sbjct: 53  ESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEEL 112

Query: 149 LAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFWANVVS 200
           LAV+V LE VNAQARKAFSRQREKMERR KPHLDRRGA+IQS+PGFWANV++
Sbjct: 113 LAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIA 164


>gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]
          Length = 308

 Score =  164 bits (414), Expect = 6e-41
 Identities = 85/112 (75%), Positives = 97/112 (86%), Gaps = 4/112 (3%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVER----QKDQRAQPGPGPMTPESALEEL 148
           + E+A L +E VL+LDDIMAEV V+AEEE LVER    Q+ Q+A PGPGPMTPESALEEL
Sbjct: 53  ESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEEL 112

Query: 149 LAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFWANVVS 200
           LAV+V LE VNAQARKAFSRQREKMERR KPHLDRRGA+IQS+PGFWANV++
Sbjct: 113 LAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIA 164


>gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]
          Length = 308

 Score =  161 bits (407), Expect = 4e-40
 Identities = 84/112 (75%), Positives = 96/112 (85%), Gaps = 4/112 (3%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVER----QKDQRAQPGPGPMTPESALEEL 148
           + E+A L +E VL+LDDIMAEV V+AEEE LVER    Q+ Q+A PGPGPMTPESA EEL
Sbjct: 53  ESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEEL 112

Query: 149 LAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFWANVVS 200
           LAV+V LE VNAQARKAFSRQREKMERR KPHLDRRGA+IQS+PGFWANV++
Sbjct: 113 LAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIA 164


>gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]
          Length = 308

 Score =  160 bits (406), Expect = 5e-40
 Identities = 84/112 (75%), Positives = 96/112 (85%), Gaps = 4/112 (3%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVER----QKDQRAQPGPGPMTPESALEEL 148
           + E+A L +E VL+LDDIMAEV V+AEEE LVER    Q+ Q+A PGPGPMTPESALEEL
Sbjct: 53  ESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEEL 112

Query: 149 LAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFWANVVS 200
           LAV+V LE VNAQARKAFSRQREKMERR KP LDRRGA+IQS+PGFWANV++
Sbjct: 113 LAVQVELEPVNAQARKAFSRQREKMERRRKPQLDRRGAVIQSVPGFWANVIA 164


>gi|239746992 PREDICTED: similar to testis specific protein,
           Y-linked 1 [Homo sapiens]
          Length = 314

 Score =  157 bits (397), Expect = 6e-39
 Identities = 85/118 (72%), Positives = 97/118 (82%), Gaps = 10/118 (8%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAE------EEALVER----QKDQRAQPGPGPMTPE 142
           + E+A L +E VL+LDDIMAEV V+AE      EE LVER    Q+ Q+A PGPGPMTPE
Sbjct: 53  ESEQAALGEEAVLLLDDIMAEVEVVAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPE 112

Query: 143 SALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFWANVVS 200
           SALEELLAV+V LE VNAQARKAFSRQREKMERR KPHLDRRGA+IQS+PGFWANV++
Sbjct: 113 SALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIA 170


>gi|239747006 PREDICTED: similar to testis specific protein,
           Y-linked 3 [Homo sapiens]
          Length = 314

 Score =  154 bits (389), Expect = 5e-38
 Identities = 84/118 (71%), Positives = 96/118 (81%), Gaps = 10/118 (8%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAE------EEALVER----QKDQRAQPGPGPMTPE 142
           + E+A L +E VL+LDDIMAEV V+AE      EE LVER    Q+ Q+A PGPGPMTPE
Sbjct: 53  ESEQAALGEEAVLLLDDIMAEVEVVAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPE 112

Query: 143 SALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFWANVVS 200
           SALEELLAV+V LE VNAQARKAFSRQREKMERR KP LDRRGA+IQS+PGFWANV++
Sbjct: 113 SALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPQLDRRGAVIQSVPGFWANVIA 170


>gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo
           sapiens]
          Length = 228

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 92  AQREEATLKQETVLVLDDIMAEVGVMAEEEALVERQK-DQRAQPGPGPMTPESALEELLA 150
           AQ ++ATL++E VL+++DIMAEV V+ EE+  VE QK +QRAQPGPGP TP  +++ L  
Sbjct: 14  AQSKDATLEEEVVLMVEDIMAEVEVVVEEKTDVEWQKVNQRAQPGPGPSTPGQSMDLLQV 73

Query: 151 VRVGLELVNAQARKA 165
           + + L  VNA   +A
Sbjct: 74  LHLELGSVNAPGHRA 88


>gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 357

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVERQKD-QRAQPGPGPMTPESALEELLAV 151
           Q +EA L++E VL ++DIMAEV V+ E E  V  QK+ QRAQPGPGP TP  +++ L  +
Sbjct: 34  QSKEAALEEEAVLKVEDIMAEVEVVVEVEPDVGWQKEGQRAQPGPGPSTPGPSMDSLEVL 93

Query: 152 RVGLELVNAQARKA 165
            + +  VNA   +A
Sbjct: 94  HLEVGSVNAPGHRA 107


>gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo
           sapiens]
          Length = 357

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVERQKD-QRAQPGPGPMTPESALEELLAV 151
           Q +EA L++E VL ++DIMAEV V+ E E  V  QK+ QRAQPGPGP TP  +++ L  +
Sbjct: 34  QSKEAALEEEAVLKVEDIMAEVEVVVEVEPDVGWQKEGQRAQPGPGPSTPGPSMDSLEVL 93

Query: 152 RVGLELVNAQARKA 165
            + +  VNA   +A
Sbjct: 94  HLEVGSVNAPGHRA 107


>gi|62988322 TSPY-like 1 [Homo sapiens]
          Length = 437

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 14/123 (11%)

Query: 84  CTVFTLPEAQREEATLKQETVLVLDDIMAEVGV-----------MAEEEALVERQKDQRA 132
           C   +   A+RE A + +E +   + +  ++ V           +AEE+ L E   + R 
Sbjct: 160 CATVSAAVAERESAEVVKEGLAEKEVMEEQMEVEEQPPEGEEIEVAEEDRLEE---EARE 216

Query: 133 QPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIP 192
           + GP P+     ++ L A+++ L+ VNAQA +AF +   K  R  + +L+RR  IIQ+IP
Sbjct: 217 EEGPWPLHEALRMDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIP 276

Query: 193 GFW 195
           GFW
Sbjct: 277 GFW 279


>gi|46094051 TSPY-like 4 [Homo sapiens]
          Length = 414

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 89  LPEAQREEATLKQETVLVLDDIMAEVGVMAEEEALVERQKDQ----RAQPGPGPMTPESA 144
           +P  + +E T K+  +    +   E G   EE+ +V+++K      + +  P      + 
Sbjct: 144 IPGKKAKEVTTKKRAISAAVEKEGEAGAAMEEKKVVQKEKKVAGGVKEETRPRAPKINNC 203

Query: 145 LEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFW 195
           ++ L A+   L  VNAQA +AF +   K  R  + H+ RR  IIQ+IPGFW
Sbjct: 204 MDSLEAIDQELSNVNAQADRAFLQLERKFGRMRRLHMQRRSFIIQNIPGFW 254


>gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo
           sapiens]
          Length = 344

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVE-RQKDQRAQPGPGPMTPESALEELLAV 151
           Q  +A L +E VLV+D++M  + V+A+EEA VE +Q+D +AQPGPGP TP  A + L  +
Sbjct: 32  QSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPGPSTPRPATDSLDVL 91

Query: 152 RVGLELVNAQARKA 165
            +    +N    +A
Sbjct: 92  HLERSYMNVPGCRA 105


>gi|49410495 TSPY-like 5 [Homo sapiens]
          Length = 417

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 125 ERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRR 184
           E +K++R   G GP   E +++ L  V++ LE +NAQA +A+ R   K  +    HL+RR
Sbjct: 183 EEKKEER-DAGSGPPATEGSMDTLENVQLKLENMNAQADRAYLRLSRKFGQLRLQHLERR 241

Query: 185 GAIIQSIPGFW 195
             +IQ+IPGFW
Sbjct: 242 NHLIQNIPGFW 252


>gi|146198777 TSPY-like 6 [Homo sapiens]
          Length = 410

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 27/83 (32%), Positives = 48/83 (57%)

Query: 113 EVGVMAEEEALVERQKDQRAQPGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREK 172
           E+ V  E  A+ E  ++    PGPGP+     L  L ++++ L+ VNA+A +A  +   +
Sbjct: 170 EMDVAEENRAIDEVNREAGPGPGPGPLNVGLHLNPLESIQLELDSVNAEADRALLQVERR 229

Query: 173 MERRCKPHLDRRGAIIQSIPGFW 195
             +  + +L++R  II++IPGFW
Sbjct: 230 FGQIHEYYLEQRNDIIRNIPGFW 252


>gi|11545835 TSPY-like 2 [Homo sapiens]
          Length = 693

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 26/54 (48%), Positives = 35/54 (64%)

Query: 142 ESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFW 195
           ES L+ L  +++ LE VN +A KAF R + K  +  +P L+RR  IIQ IPGFW
Sbjct: 213 ESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFW 266


>gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 217

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 111 MAEVGVMAEEEALVERQK-DQRAQPGPGPMTPESALEELLAVRVGLELVNAQAR 163
           MAE+ V+A+EEA VERQ+ DQ+AQPG GP  P  A + L  + V L  VNA  R
Sbjct: 1   MAEMEVVAKEEANVERQQEDQQAQPGLGPSMPPPATDSLDVLHVELGSVNAPGR 54


>gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 111 MAEVGVMAEEEALVERQK-DQRAQPGPGPMTPESALEELLAVRVGLELVNAQAR 163
           MAE+ V+A+EEA VERQ+ DQ+AQPG GP  P  A + L  + V L  VNA  R
Sbjct: 1   MAEMEVVAKEEANVERQQEDQQAQPGLGPSMPPPATDSLDVLHVELGSVNAPGR 54


>gi|170763500 SET translocation (myeloid leukemia-associated)
           isoform 1 [Homo sapiens]
          Length = 290

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 16/62 (25%), Positives = 30/62 (48%)

Query: 134 PGPGPMTPESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPG 193
           P  G    + A+E +  V+  ++ +N QA +   +  +K  +  +P   +R  +I  IP 
Sbjct: 34  PKKGEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPN 93

Query: 194 FW 195
           FW
Sbjct: 94  FW 95


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 10/89 (11%)

Query: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVERQKDQ--RAQPGPGPMTPESALE---E 147
           ++++A L+Q+ +L   + + +     +++ L+++Q++Q  + Q  P P+ PE   E   E
Sbjct: 268 EQQQAQLQQQLLLQQQEQLQQ----QQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELE 323

Query: 148 LLAVRVGLELVNAQARKAFSRQREKMERR 176
           L+ V +G E    Q R+   RQ+E +ER+
Sbjct: 324 LMPVDLGSEQELEQQRQELERQQE-LERQ 351


>gi|170763498 SET translocation (myeloid leukemia-associated)
           isoform 2 [Homo sapiens]
          Length = 277

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 142 ESALEELLAVRVGLELVNAQARKAFSRQREKMERRCKPHLDRRGAIIQSIPGFW 195
           + A+E +  V+  ++ +N QA +   +  +K  +  +P   +R  +I  IP FW
Sbjct: 29  QEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFW 82


>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
          Length = 474

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 11/97 (11%)

Query: 88  TLPEAQRE----EATLKQETVLVLDDIMAEVGVMAEEEALVERQKDQRAQPGPGPM---- 139
           TL + +RE    E TL+QE   +++ +   +  +  E+ +++ + DQ     P P     
Sbjct: 191 TLEQLRREKIDLENTLEQEQEALVNRLWKRMDKLEAEKRILQEKLDQPVSAPPSPRDISM 250

Query: 140 ---TPESALEELLAVRVGLELVNAQARKAFSRQREKM 173
              +PE+ +  +  ++  +E +  Q R A  +  EKM
Sbjct: 251 EIDSPENMMRHIRFLKNEVERLKKQLRAAQLQHSEKM 287


>gi|21536423 amphiphysin isoform 2 [Homo sapiens]
          Length = 653

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 90  PEAQREEATLKQETVLVLDDIMAEVGVMAEEE--------ALVERQKDQRAQPGPGPMTP 141
           PEA+  EAT+ QE   V+  ++ E     EEE        A  +   +  A PGP   TP
Sbjct: 483 PEAEELEATVPQEK--VIPSVVIEPASNHEEEGENEITIGAEPKETTEDAAPPGPTSETP 540

Query: 142 ESALEE 147
           E A E+
Sbjct: 541 ELATEQ 546


>gi|4502081 amphiphysin isoform 1 [Homo sapiens]
          Length = 695

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 90  PEAQREEATLKQETVLVLDDIMAEVGVMAEEE--------ALVERQKDQRAQPGPGPMTP 141
           PEA+  EAT+ QE   V+  ++ E     EEE        A  +   +  A PGP   TP
Sbjct: 525 PEAEELEATVPQEK--VIPSVVIEPASNHEEEGENEITIGAEPKETTEDAAPPGPTSETP 582

Query: 142 ESALEE 147
           E A E+
Sbjct: 583 ELATEQ 588


>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
            sapiens]
          Length = 3549

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 88   TLPEAQREEATLKQETVLVLDDIMAEVGVMAEE-----EALVERQKDQRAQPGPGPMTP 141
            +L EAQR    + +E V+  D      G   E+     +  V+R K+   QP PGP  P
Sbjct: 1928 SLKEAQRSFKEVHKEGVIKKDAKAVMAGSSGEQKTDIHQVAVQRNKNSLLQPKPGPFEP 1986


>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
          Length = 1476

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 89  LPEAQREEATLKQ---ETVLVLDDIMAEVGVMAEEEALVERQKDQRAQPGPGPMTPESAL 145
           L E QRE   L+    E    LD +  +V  +AEE   +E +  +  +P PG  +P  A 
Sbjct: 384 LHETQRENLLLRTRLGEAHAELDSLRHQVDQLAEENVELELELQRSLEPPPG--SPGEAP 441

Query: 146 EELLAVRVGLELVNAQARKAFSRQREKMERR 176
               A  +  E+  A+A +  + +RE  E R
Sbjct: 442 LAGAAPSLQDEVREAEAGRLRTLERENRELR 472


>gi|26051271 voltage-gated potassium channel, subfamily H, member 2
           isoform b [Homo sapiens]
          Length = 888

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 77  GGAWKPGCTVFT--LPEAQREEATLKQETVLVLDDIMAEVGVMAEEEALVERQKDQRAQP 134
           GGA  PG  V    L  A     +L  + V  +D+ +A +G   E  ALV      R+ P
Sbjct: 186 GGAGAPGAVVVDVDLTPAAPSSESLALDEVTAMDNHVAGLGPAEERRALVGPGSPPRSAP 245

Query: 135 GPGP 138
           G  P
Sbjct: 246 GQLP 249


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,358,952
Number of Sequences: 37866
Number of extensions: 346042
Number of successful extensions: 1457
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1392
Number of HSP's gapped (non-prelim): 67
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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