Guide to the Human Genome
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Name: TSPYL5 Sequence: fasta or formatted (417aa) NCBI GI: 49410495
Description:

TSPY-like 5

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         44           3
 C cysteine            1.0          4           1
 D aspartate           3.4         14           2
 E glutamate           7.4         31           2
 F phenylalanine       2.9         12           2
 G glycine            11.5         48           2
 H histidine           1.4          6           1
 I isoleucine          2.4         10           2
 K lysine              5.8         24           2
 L leucine             8.6         36           2
 M methionine          1.0          4           1
 N asparagine          5.0         21           2
 P proline             6.5         27           2
 Q glutamine           6.7         28           1
 R arginine            8.2         34           2
 S serine              7.7         32           2
 T threonine           2.9         12           2
 V valine              4.1         17           2
 W tryptophan          1.2          5           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TSPY-like 5 
TSPYL4                0.340   TSPY-like 4 
TSPYL1                0.284   TSPY-like 1 
TSPYL6                0.252   TSPY-like 6 
TSPYL2                0.231   TSPY-like 2 
SET                   0.180   SET translocation (myeloid leukemia-associated) iso...
LOC100289087          0.174   PREDICTED: hypothetical protein XP_002344239 
LOC728395             0.174   PREDICTED: similar to testis specific protein, Y-li...
TSPY2                 0.174   testis specific protein, Y-linked 2 
LOC646817             0.171   PREDICTED: similar to SET translocation 
LOC646817             0.171   PREDICTED: similar to SET translocation 
LOC646817             0.171   PREDICTED: similar to SET translocation 
LOC728132             0.170   PREDICTED: similar to testis specific protein, Y-li...
TSPY3                 0.170   testis specific protein, Y-linked 3 
SET                   0.170   SET translocation (myeloid leukemia-associated) iso...
LOC728403             0.169   PREDICTED: similar to Testis-specific Y-encoded pro...
TSPY1                 0.169   testis specific protein, Y-linked 1 
LOC389217             0.147   PREDICTED: similar to SET translocation 
LOC389217             0.147   PREDICTED: similar to SET translocation 
LOC389217             0.147   PREDICTED: similar to SET translocation 
LOC727969             0.037   PREDICTED: similar to hCG1807781 
LOC727969             0.037   PREDICTED: similar to TSPY-like 2 
LOC727969             0.037   PREDICTED: similar to hCG1807781 
LOC100130208          0.028   PREDICTED: similar to CYorf16 protein 
LOC100130208          0.028   PREDICTED: hypothetical protein 
NAP1L3                0.027   nucleosome assembly protein 1-like 3 
LOC100292671          0.026   PREDICTED: similar to CYorf16 protein 
LOC100290384          0.026   PREDICTED: hypothetical protein XP_002348288 
NAP1L1                0.023   nucleosome assembly protein 1-like 1 
NAP1L1                0.023   nucleosome assembly protein 1-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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