Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239746831
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
sapiens]
(188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo ... 394 e-110
gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo sap... 394 e-110
gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo sap... 355 2e-98
gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens] 342 1e-94
gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo sap... 333 7e-92
gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens] 332 9e-92
gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo sap... 327 3e-90
gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo sap... 313 7e-86
gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo sapi... 311 2e-85
gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo sa... 311 2e-85
gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens] 309 1e-84
gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens] 301 2e-82
gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo sap... 287 3e-78
gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo sap... 173 9e-44
gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo sa... 173 9e-44
gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo ... 98 5e-21
gi|147905620 PR domain containing 9 [Homo sapiens] 82 2e-16
gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens] 82 3e-16
gi|48717241 zinc finger protein 425 [Homo sapiens] 49 3e-06
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ... 46 2e-05
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ... 46 2e-05
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ... 46 2e-05
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ... 46 2e-05
gi|21699074 zinc finger protein 688 isoform a [Homo sapiens] 46 2e-05
gi|118918411 zinc finger protein 777 [Homo sapiens] 43 1e-04
gi|25777704 zinc finger 398 isoform a [Homo sapiens] 43 2e-04
gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens] 39 0.002
gi|154800449 zinc finger protein 132 [Homo sapiens] 39 0.003
gi|22027480 pogo transposable element with KRAB domain [Homo sap... 39 0.003
gi|170932473 zinc finger protein 786 [Homo sapiens] 39 0.003
>gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
sapiens]
Length = 188
Score = 394 bits (1012), Expect = e-110
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo
sapiens]
Length = 188
Score = 394 bits (1012), Expect = e-110
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo
sapiens]
Length = 188
Score = 355 bits (910), Expect = 2e-98
Identities = 171/188 (90%), Positives = 175/188 (93%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDD FARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMK SEKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKA LP FM NKR DFQGND DNDPNRGNQV+RPQMTFGRLQGI PKIMPKKPAEEG
Sbjct: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
N S+EVPEASGPQNDGK+LCPPGKPTTSEKI+ SGPKRGEHAWTHRLRERKQLVIYEEI
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
Length = 188
Score = 342 bits (876), Expect = 1e-94
Identities = 164/188 (87%), Positives = 172/188 (91%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRP G+QIPEKIQKAFDDIAKYFSK+EWEKMK+SEKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKATLPPFMCN A D QGND DND N NQVER QMTFGRLQGI PKIMPKKPAE G
Sbjct: 61 LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
NDS+EVPEASG QNDGK+LCPPGKPTTSEKI++ SGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo
sapiens]
Length = 188
Score = 333 bits (853), Expect = 7e-92
Identities = 158/188 (84%), Positives = 172/188 (91%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAF RRP VG+QIPEK+QKAFDDIAKYFS++EWEKMKASEKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKATLPPFM NKR DFQGND DNDPNRGNQVE PQMTFGRLQGI PKI P+KPAEEG
Sbjct: 61 LGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
NDS+ VPEASGPQN+GK+L P GK TSEK+++ SGPKRG+HAWTHR+RERKQLVIYEEI
Sbjct: 121 NDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDP+EDDE
Sbjct: 181 SDPQEDDE 188
>gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]
Length = 188
Score = 332 bits (852), Expect = 9e-92
Identities = 161/188 (85%), Positives = 170/188 (90%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRP GAQIPEKIQK+FDDIAKYFSK+EWEKMK+ EKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKATLPPFM N A D QGND DND N+GNQVERPQMTF RLQ I PKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
NDS+ VPEASG QNDGK LCPPGKP+TSEKI++ SGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo
sapiens]
Length = 223
Score = 327 bits (839), Expect = 3e-90
Identities = 156/161 (96%), Positives = 158/161 (98%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGE 161
NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSG + +
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGNREAQ 161
>gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
sapiens]
Length = 229
Score = 313 bits (801), Expect = 7e-86
Identities = 158/229 (68%), Positives = 172/229 (75%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQK------------------------------------- 23
MNGDDAF RRP VG+QIPEK+QK
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
Query: 24 ----AFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKRAEDF 79
AFDDIAKYFS++EWEKMKASEKI YVYMKRKYEAMTKLGFKATLPPFM NKR DF
Sbjct: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
Query: 80 QGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQNDGKEL 139
QGND DNDPNRGNQVE PQMTFGRLQGI PKI P+KPAEEGNDS+ VPEASGPQN+GK+L
Sbjct: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
Query: 140 CPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEISDPEEDDE 188
P GK TSEK+++ SGPKRG+HAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
>gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo
sapiens]
Length = 188
Score = 311 bits (798), Expect = 2e-85
Identities = 150/188 (79%), Positives = 162/188 (86%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRP AQI EK++KAFDDIAKYFSK+EWEKMK+SEKI YVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFK TLPPFM +KRA DF GND ND N NQVERPQMTFG LQ I PKIMPKKPAEE
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
N +EVPEASGPQNDGK+LCPPG P+T EKI++ SGPKRG+HAWTHRLRERKQLV+YEEI
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo
sapiens]
Length = 188
Score = 311 bits (798), Expect = 2e-85
Identities = 150/188 (79%), Positives = 162/188 (86%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRP AQI EK++KAFDDIAKYFSK+EWEKMK+SEKI YVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFK TLPPFM +KRA DF GND ND N NQVERPQMTFG LQ I PKIMPKKPAEE
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
N +EVPEASGPQNDGK+LCPPG P+T EKI++ SGPKRG+HAWTHRLRERKQLV+YEEI
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
Length = 188
Score = 309 bits (791), Expect = 1e-84
Identities = 152/188 (80%), Positives = 164/188 (87%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFA+RP A+ EK KAFDDIAKYFSKEEWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGF TL FM NKRA D Q ND DND NRGN+VERPQMTFGRLQ I PKIMP+KPAEEG
Sbjct: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
+DS+ VPEASGPQNDGK+LCPPGK ++SEKIHERSGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDD+
Sbjct: 181 SDPEEDDK 188
>gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]
Length = 188
Score = 301 bits (772), Expect = 2e-82
Identities = 147/188 (78%), Positives = 159/188 (84%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDD FA+RP A+ EK KAFDDIA YFSK+EW+KMK SEKI YVYMKR Y+AMTK
Sbjct: 1 MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFK TLPPFMCNK+A DFQGND DND NR QVE PQMTFGRL I PKIMPKKPAE+
Sbjct: 61 LGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDE 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
NDS+ V EASGPQNDGK+L PPGK SEKI++RSGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKGVSEASGPQNDGKQLHPPGKANISEKINKRSGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDE 188
SDPEEDDE
Sbjct: 181 SDPEEDDE 188
>gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
sapiens]
Length = 170
Score = 287 bits (735), Expect = 3e-78
Identities = 139/156 (89%), Positives = 143/156 (91%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDD FARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMK SEKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
LGFKA LP FM NKR DFQGND DNDPNRGNQV+RPQMTFGRLQGI PKIMPKKPAEEG
Sbjct: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
Query: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSG 156
N S+EVPEASGPQNDGK+LCPPGKPTTSEKI+ SG
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
>gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo
sapiens]
Length = 153
Score = 173 bits (438), Expect = 9e-44
Identities = 85/110 (77%), Positives = 90/110 (81%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRP AQI EK++KAFDDIAKYFSK+EWEKMK+SEKI YVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPK 110
LGFK TLPPFM +KRA DF GND ND N NQVERPQMTFG LQ I PK
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo
sapiens]
Length = 153
Score = 173 bits (438), Expect = 9e-44
Identities = 85/110 (77%), Positives = 90/110 (81%)
Query: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
MNGDDAFARRP AQI EK++KAFDDIAKYFSK+EWEKMK+SEKI YVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPK 110
LGFK TLPPFM +KRA DF GND ND N NQVERPQMTFG LQ I PK
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo
sapiens]
Length = 102
Score = 97.8 bits (242), Expect = 5e-21
Identities = 47/66 (71%), Positives = 54/66 (81%)
Query: 94 VERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQNDGKELCPPGKPTTSEKIHE 153
VE PQMTFGRL I PKIMPKKPAE+ NDS+ V EASGPQNDGK+L PPGK SEKI++
Sbjct: 37 VEHPQMTFGRLHRIIPKIMPKKPAEDENDSKGVSEASGPQNDGKQLHPPGKANISEKINK 96
Query: 154 RSGPKR 159
RSG ++
Sbjct: 97 RSGKRK 102
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 82.4 bits (202), Expect = 2e-16
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 19/182 (10%)
Query: 21 IQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKR----- 75
++ AF DI+ YF+KEEW +M EK Y +KR Y A+ +G +AT P FMC++R
Sbjct: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNALITIGLRATRPAFMCHRRQAIKL 83
Query: 76 -AEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVP------E 128
+D + +D + P + QV+ P M Q K MPK + +E+
Sbjct: 84 QVDDTEDSDEEWTPRQ--QVKPPWMALRVEQRKHQKGMPKASFSNESSLKELSRTANLLN 141
Query: 129 ASGPQNDGKELCPPGKPTTSEKIHER---SGPKRGEHAWTHRLRERKQLVIYEEISDPEE 185
ASG + K + P G+ +TS + H R K+ + LRERK Y+E+S+P++
Sbjct: 142 ASGSEQAQKPVSPSGEASTSGQ-HSRLKLELRKKETERKMYSLRERKGHA-YKEVSEPQD 199
Query: 186 DD 187
DD
Sbjct: 200 DD 201
>gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
Length = 492
Score = 82.0 bits (201), Expect = 3e-16
Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 29/187 (15%)
Query: 21 IQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKR----- 75
++ AF DI+ YF+KEEW +M EK Y +K Y A+ +G +AT P FMC++R
Sbjct: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
Query: 76 -AEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQN 134
+D + +D + P + QV+ P M F Q K MPK N+ + E SG N
Sbjct: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPK---ASFNNESSLRELSGTPN 138
Query: 135 ---------DGKELCPPGKPTTSE-----KIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
K + PPG+ +TS K+ R G+ + LRERK Y+EI
Sbjct: 139 LLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGK---MYSLRERKGHA-YKEI 194
Query: 181 SDPEEDD 187
S+P++DD
Sbjct: 195 SEPQDDD 201
>gi|48717241 zinc finger protein 425 [Homo sapiens]
Length = 752
Score = 48.5 bits (114), Expect = 3e-06
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 30/161 (18%)
Query: 18 PEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVY-MKRKYEAMTKLGFKATLPPFMCNKRA 76
P + FDD+A YFS++EWE ++ +K Y MK YE + LG+ + P +
Sbjct: 4 PASVTVTFDDVALYFSEQEWEILEKWQKQMYKQEMKTNYETLDSLGYAFSKPDLI----- 58
Query: 77 EDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQNDG 136
+E+ +M QG K S E +N G
Sbjct: 59 ---------------TWMEQGRMLLISEQGCLDK-------TRRTTSPPTDEQLNMKNTG 96
Query: 137 KELC--PPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLV 175
K LC G P T E+ +GP++ + R +ERK L+
Sbjct: 97 KLLCFDDEGTPRTKEEDCRLNGPQKQDLCAALRGKERKILL 137
>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 46.2 bits (108), Expect = 2e-05
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKASEKIFYVY-MKRKYEAMTKLGFKATLPPFMCNKRAED 78
K+ FDD+A YFS+ EW K++ +K Y + M+ YE + L + + P + R E
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDLDN-DPNRGNQVE--RPQMTFGRLQGISPKI-MPKKPAEEGNDSEEVPEASGP-- 132
+ LD +GN+VE RP+M L + P PA+ EE+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQ-----EELKEGQAPKQ 252
Query: 133 QNDGKELCPPGKP 145
Q D + P P
Sbjct: 253 QQDSEARVAPAGP 265
>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
sapiens]
Length = 546
Score = 46.2 bits (108), Expect = 2e-05
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKASEKIFYVY-MKRKYEAMTKLGFKATLPPFMCNKRAED 78
K+ FDD+A YFS+ EW K++ +K Y + M+ YE + L + + P + R E
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDLDN-DPNRGNQVE--RPQMTFGRLQGISPKI-MPKKPAEEGNDSEEVPEASGP-- 132
+ LD +GN+VE RP+M L + P PA+ EE+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQ-----EELKEGQAPKQ 252
Query: 133 QNDGKELCPPGKP 145
Q D + P P
Sbjct: 253 QQDSEARVAPAGP 265
>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
sapiens]
Length = 546
Score = 46.2 bits (108), Expect = 2e-05
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKASEKIFYVY-MKRKYEAMTKLGFKATLPPFMCNKRAED 78
K+ FDD+A YFS+ EW K++ +K Y + M+ YE + L + + P + R E
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDLDN-DPNRGNQVE--RPQMTFGRLQGISPKI-MPKKPAEEGNDSEEVPEASGP-- 132
+ LD +GN+VE RP+M L + P PA+ EE+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQ-----EELKEGQAPKQ 252
Query: 133 QNDGKELCPPGKP 145
Q D + P P
Sbjct: 253 QQDSEARVAPAGP 265
>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 46.2 bits (108), Expect = 2e-05
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKASEKIFYVY-MKRKYEAMTKLGFKATLPPFMCNKRAED 78
K+ FDD+A YFS+ EW K++ +K Y + M+ YE + L + + P + R E
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDLDN-DPNRGNQVE--RPQMTFGRLQGISPKI-MPKKPAEEGNDSEEVPEASGP-- 132
+ LD +GN+VE RP+M L + P PA+ EE+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQ-----EELKEGQAPKQ 252
Query: 133 QNDGKELCPPGKP 145
Q D + P P
Sbjct: 253 QQDSEARVAPAGP 265
>gi|21699074 zinc finger protein 688 isoform a [Homo sapiens]
Length = 276
Score = 45.8 bits (107), Expect = 2e-05
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 24 AFDDIAKYFSKEEWEKMKASEKIFY-VYMKRKYEAMTKLGFKATLPPFMCNKRAEDFQGN 82
+F D+A YFS EEW ++ +++ Y M+ Y + LGF P + E +
Sbjct: 27 SFADVAVYFSPEEWGCLRPAQRALYRDVMQETYGHLGALGFPGPKPALISWMEQESEAWS 86
Query: 83 DLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQ 133
DP +G RL G +P + EE EEVP A GP+
Sbjct: 87 PAAQDPEKGE----------RLGGARRGDVPNRKEEE---PEEVPRAKGPR 124
>gi|118918411 zinc finger protein 777 [Homo sapiens]
Length = 831
Score = 43.1 bits (100), Expect = 1e-04
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 11 PTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYV-YMKRKYEAMTKLGFKATLPP 69
P ++P K+ FDD+A +FS++EW + +K Y M+ YE++ + + + P
Sbjct: 274 PGSNGEVP-KVPVTFDDVAVHFSEQEWGNLSEWQKELYKNVMRGNYESLVSMDYAISKPD 332
Query: 70 FMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPE 128
M + D G E P GI KI + +EG++S E PE
Sbjct: 333 LMSQMERGERPTMQEQEDSEEG---ETPTDPSAAHDGIVIKI-EVQTNDEGSESLETPE 387
>gi|25777704 zinc finger 398 isoform a [Homo sapiens]
Length = 642
Score = 42.7 bits (99), Expect = 2e-04
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 11 PTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYV-YMKRKYEAMTKLGFKATLPP 69
P + IP K+ AFDD++ YFS EWEK++ +K Y MK YE++ + + P
Sbjct: 132 PGIKGDIP-KVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQPD 190
Query: 70 FMCNKRAE 77
+ + E
Sbjct: 191 VLSQIQPE 198
>gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens]
Length = 425
Score = 39.3 bits (90), Expect = 0.002
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 24 AFDDIAKYFSKEEWEKMKASEKIFY-VYMKRKYEAMTKLGFKATLPPFMCNKRAEDFQGN 82
+F+D+A YF++EEW + +K Y M Y M LGF+ P +C + E++
Sbjct: 12 SFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLGFQFPKPEMIC--QLENWDEQ 69
Query: 83 DLDNDPNRGNQ 93
+ + P GN+
Sbjct: 70 WILDLPRTGNR 80
>gi|154800449 zinc finger protein 132 [Homo sapiens]
Length = 706
Score = 38.9 bits (89), Expect = 0.003
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 14 GAQIPE-KIQKAFDDIAKYFSKEEWEKMKASEK-IFYVYMKRKYEAMTKLG 62
G+ +P K F+D+A YFS+EEWE + A+++ +++ M E +T LG
Sbjct: 28 GSAVPTLKSMVTFEDVAVYFSQEEWELLDAAQRHLYHSVMLENLELVTSLG 78
>gi|22027480 pogo transposable element with KRAB domain [Homo
sapiens]
Length = 609
Score = 38.9 bits (89), Expect = 0.003
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 25 FDDIAKYFSKEEWEKMKASEKIFY-VYMKRKYEAMTKLGFKATLPPFMCNKRAEDFQGND 83
FD++A YFS EEWE + +K Y M+ YE + L F P + E+ N
Sbjct: 49 FDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMITRLEGEEESQNS 108
Query: 84 LDNDPNRGNQVERPQ 98
+ G E +
Sbjct: 109 DEWQLQGGTSAENEE 123
>gi|170932473 zinc finger protein 786 [Homo sapiens]
Length = 782
Score = 38.9 bits (89), Expect = 0.003
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 18 PEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVY-MKRKYEAMTKL 61
P ++ F+D+A YFS++EW+ ++A +K Y + M+ YE + L
Sbjct: 4 PPRLPLTFEDVAIYFSEQEWQDLEAWQKELYKHVMRSNYETLVSL 48
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,899,061
Number of Sequences: 37866
Number of extensions: 448203
Number of successful extensions: 1888
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 1660
Number of HSP's gapped (non-prelim): 391
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.