Guide to the Human Genome
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Name: ZNF789 Sequence: fasta or formatted (425aa) NCBI GI: 61676102
Description:

zinc finger protein 789 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [62aa] zinc finger protein 789 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         13           1
 C cysteine            5.4         23           1
 D aspartate           3.3         14           1
 E glutamate           7.3         31           2
 F phenylalanine       5.9         25           2
 G glycine             6.1         26           1
 H histidine           5.9         25           1
 I isoleucine          4.0         17           1
 K lysine              9.6         41           2
 L leucine             7.8         33           3
 M methionine          1.6          7           1
 N asparagine          3.5         15           1
 P proline             3.3         14           2
 Q glutamine           7.5         32           2
 R arginine            6.8         29           2
 S serine              6.8         29           1
 T threonine           4.5         19           1
 V valine              3.3         14           2
 W tryptophan          1.6          7           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 789 isoform 1 
ZNF829                0.333   zinc finger protein 829 
ZNF582                0.333   zinc finger protein 582 
ZNF485                0.329   zinc finger protein 485 
ZNF619                0.324   zinc finger protein 619 isoform 2 
ZNF420                0.324   zinc finger protein 420 
ZNF790                0.324   zinc finger protein 790 
ZNF568                0.320   zinc finger protein 568 
ZNF184                0.319   zinc finger protein 184 
ZNF626                0.318   zinc finger protein 626 isoform 1 
ZNF85                 0.318   zinc finger protein 85 
ZNF454                0.318   zinc finger protein 454 
ZNF251                0.317   zinc finger protein 251 
ZNF34                 0.317   zinc finger protein 34 
ZNF66                 0.316   PREDICTED: zinc finger protein 66 
ZNF66                 0.316   PREDICTED: zinc finger protein 66 
ZNF66                 0.316   PREDICTED: zinc finger protein 66 
ZNF383                0.316   zinc finger protein 383 
ZNF506                0.315   zinc finger protein 506 isoform 1 
ZNF157                0.315   zinc finger protein 157 
ZNF431                0.313   zinc finger protein 431 
ZNF430                0.313   zinc finger protein 430 
ZNF92                 0.312   zinc finger protein 92 isoform 2 
LOC646864             0.311   PREDICTED: similar to hCG36734 
LOC646864             0.311   PREDICTED: similar to hCG36734 
LOC646864             0.311   PREDICTED: similar to hCG36734 
ZNF642                0.311   zinc finger protein 642 
ZNF773                0.310   zinc finger protein 773 
ZNF98                 0.309   zinc finger protein 98 
LOC400713             0.309   zinc finger protein LOC400713 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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