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Search of human proteins with 239746324
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo
sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo ... 707 0.0
gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo ... 688 0.0
gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo ... 646 0.0
gi|239746322 PREDICTED: hypothetical protein XP_002343729 [Homo ... 91 1e-18
gi|60097902 filaggrin [Homo sapiens] 47 3e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 43 4e-04
gi|239757829 PREDICTED: hypothetical protein [Homo sapiens] 42 8e-04
gi|239752340 PREDICTED: hypothetical protein XP_002348205 [Homo ... 42 8e-04
gi|239751859 PREDICTED: similar to LMARRLC1A [Homo sapiens] 42 8e-04
gi|239746853 PREDICTED: hypothetical protein XP_002343864 [Homo ... 42 8e-04
gi|239746350 PREDICTED: hypothetical protein XP_002343735 [Homo ... 42 8e-04
gi|57864582 hornerin [Homo sapiens] 41 0.001
gi|62122917 filaggrin family member 2 [Homo sapiens] 41 0.002
gi|239757352 PREDICTED: similar to LMARRLC1A [Homo sapiens] 40 0.002
gi|239744358 PREDICTED: hypothetical protein XP_002343105 [Homo ... 40 0.002
gi|14249622 ajuba isoform 1 [Homo sapiens] 40 0.003
gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens] 40 0.004
gi|239755481 PREDICTED: similar to Putative uncharacterized prot... 39 0.005
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 38 0.014
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 38 0.014
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 38 0.014
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 38 0.014
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] 38 0.014
gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens] 37 0.024
gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens] 37 0.024
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 37 0.032
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 37 0.032
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 37 0.032
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 37 0.032
>gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo
sapiens]
Length = 329
Score = 707 bits (1824), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MILIATGSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSE 60
MILIATGSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSE
Sbjct: 1 MILIATGSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSE 60
Query: 61 HQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILG 120
HQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILG
Sbjct: 61 HQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILG 120
Query: 121 AGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPES 180
AGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPES
Sbjct: 121 AGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPES 180
Query: 181 QEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ 240
QEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ
Sbjct: 181 QEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ 240
Query: 241 VEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVRE 300
VEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVRE
Sbjct: 241 VEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVRE 300
Query: 301 VAVIPILVADRIVPHSGSWCEPTSGFGSP 329
VAVIPILVADRIVPHSGSWCEPTSGFGSP
Sbjct: 301 VAVIPILVADRIVPHSGSWCEPTSGFGSP 329
>gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo
sapiens]
Length = 589
Score = 688 bits (1776), Expect = 0.0
Identities = 321/323 (99%), Positives = 321/323 (99%)
Query: 1 MILIATGSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSE 60
MILIATGSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSE
Sbjct: 1 MILIATGSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSE 60
Query: 61 HQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILG 120
HQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILG
Sbjct: 61 HQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILG 120
Query: 121 AGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPES 180
AGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPES
Sbjct: 121 AGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPES 180
Query: 181 QEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ 240
QEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ
Sbjct: 181 QEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ 240
Query: 241 VEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVRE 300
VEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVRE
Sbjct: 241 VEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVRE 300
Query: 301 VAVIPILVADRIVPHSGSWCEPT 323
VAVIPILVADRIVPHSGSW PT
Sbjct: 301 VAVIPILVADRIVPHSGSWVSPT 323
Score = 93.2 bits (230), Expect = 3e-19
Identities = 61/169 (36%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 140 VQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHG 199
V AVD G Q Q G A P P + Q+ VG + QEQDAG+H
Sbjct: 354 VDAAVDVGKGDTQGVQLIQQQEGDPGQAGPSEVLAPDGFKHQQKAVGADGGQEQDAGVHV 413
Query: 200 QQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPG 259
+QD+GGQ PV NG QDGQRQ +++ + QVE+P G P G HP
Sbjct: 414 EQDEGGQDAAGGPAKGPVVMLYNGREQDGQRQAGEEVGYRQVEEPDGIDGPLGLECRHPD 473
Query: 260 HHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVREVAVIPILV 308
H GIA+H HQED + Q V +HR V ++ I+V
Sbjct: 474 HQGIAQHSHQED---DCKDDQGQDVWNTQRVRSFIHRGVEVQGILVIIV 519
>gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo
sapiens]
Length = 582
Score = 646 bits (1667), Expect = 0.0
Identities = 302/321 (94%), Positives = 305/321 (95%), Gaps = 12/321 (3%)
Query: 3 LIATGSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQ 62
L++TGS + E EEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQ
Sbjct: 8 LVSTGSNRRE------------EEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQ 55
Query: 63 PQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAG 122
PQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAG
Sbjct: 56 PQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAG 115
Query: 123 GAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQE 182
GAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQE
Sbjct: 116 GAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQE 175
Query: 183 AEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVE 242
AEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVE
Sbjct: 176 AEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVE 235
Query: 243 QPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVREVA 302
QPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVREVA
Sbjct: 236 QPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVREVA 295
Query: 303 VIPILVADRIVPHSGSWCEPT 323
VIPILVADRIVPHSGSW PT
Sbjct: 296 VIPILVADRIVPHSGSWVSPT 316
Score = 93.2 bits (230), Expect = 3e-19
Identities = 61/169 (36%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 140 VQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHG 199
V AVD G Q Q G A P P + Q+ VG + QEQDAG+H
Sbjct: 347 VDAAVDVGKGDTQGVQLIQQQEGDPGQAGPSEVLAPDGFKHQQKAVGADGGQEQDAGVHV 406
Query: 200 QQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPG 259
+QD+GGQ PV NG QDGQRQ +++ + QVE+P G P G HP
Sbjct: 407 EQDEGGQDAAGGPAKGPVVMLYNGREQDGQRQAGEEVGYRQVEEPDGIDGPLGLECRHPD 466
Query: 260 HHGIARHPHQEDGGIQWERGHAQRVDGQAGAIQAVHRAVREVAVIPILV 308
H GIA+H HQED + Q V +HR V ++ I+V
Sbjct: 467 HQGIAQHSHQED---DCKDDQGQDVWNTQRVRSFIHRGVEVQGILVIIV 512
>gi|239746322 PREDICTED: hypothetical protein XP_002343729 [Homo
sapiens]
Length = 221
Score = 90.9 bits (224), Expect = 1e-18
Identities = 53/142 (37%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 167 ARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQ 226
A P P + Q+ VG + QEQDAG+H +QD+GGQ PV NG Q
Sbjct: 13 ASPSEVLAPDGFKHQQKAVGADGGQEQDAGVHVEQDEGGQDAAGGPAKGPVVMLYNGREQ 72
Query: 227 DGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDG 286
DGQRQ +++ + QVE+P G P G HP H GIA+H HQED + Q V
Sbjct: 73 DGQRQAGEEVGYRQVEEPDGIDGPLGLECRHPDHQGIAQHSHQED---DCKDDQGQDVWN 129
Query: 287 QAGAIQAVHRAVREVAVIPILV 308
+HR V ++ I+V
Sbjct: 130 TQRVRSFIHRGVEVQGILVIIV 151
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 46.6 bits (109), Expect = 3e-05
Identities = 74/314 (23%), Positives = 99/314 (31%), Gaps = 40/314 (12%)
Query: 9 EKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQG-----PGQECGVRGRHSEHQP 63
E+ E+T G S G + + H Q PG G GR HQ
Sbjct: 2098 EQSESTHGQSAPSTGGRQGSHYDQAQDSSRHSASQEGQDTIRGHPGPSRG--GRQGSHQ- 2154
Query: 64 QQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAA------------GHGHQGPQ--EAK 109
+Q V HH+ + + Q G+ +A G H G EA
Sbjct: 2155 EQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRKTYDKEQSGDGSRHSGSHHHEAS 2214
Query: 110 KKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLH---- 165
D S L G + T +P V D GH E + G + + H
Sbjct: 2215 SWADSSRHSLVGQGQSSGPRTSRPRGSS--VSQDSDSEGHSEDSERRSGSASRNHHGSAQ 2272
Query: 166 -PARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAST--GN 222
+R +R P E + + Q H + GGQ ++H R A G+
Sbjct: 2273 EQSRDGSRHPRSHHEDRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGS 2332
Query: 223 GHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQ 282
H Q I HGQ +GH S G H ED Q H
Sbjct: 2333 HHQQSADSSRHSGIGHGQA---SSAVRDSGHRGS-SGSQASDSEGHSEDSDTQSVSAH-- 2386
Query: 283 RVDGQAGAIQAVHR 296
GQAG Q H+
Sbjct: 2387 ---GQAGPHQQSHQ 2397
Score = 43.9 bits (102), Expect = 2e-04
Identities = 69/283 (24%), Positives = 93/283 (32%), Gaps = 61/283 (21%)
Query: 48 PGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQE 107
PG G GR H Q V + H+G S +G A HGH G +
Sbjct: 2466 PGSSSG--GRQGSHYEQLV------DRSGHSGSHHSHTTS-----QGRSDASHGHSGSRS 2512
Query: 108 AKKKP-------DGS------HRILGAGGAAVVHHTLQPG----------WEVLLVQPAV 144
A ++ DGS H + + H + G W Q +
Sbjct: 2513 ASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSSFSQDS- 2571
Query: 145 DGGGHGEQQGQCPGCPTGHLHPA-----RPLNRRPPGRPESQEAEVGTESCQEQDAGIHG 199
D GH E + G + + H + R +R P E + + Q H
Sbjct: 2572 DSQGHSEDSERWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSGTRHT 2631
Query: 200 QQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPG 259
Q GGQ ++H R +S G H Q Q+A RH G H A G
Sbjct: 2632 QTSSGGQAASSHEQAR--SSAGERHGSHHQ-QSADSSRHS-----GIGHGQASSAVRDSG 2683
Query: 260 HHGIA------RHPHQEDGGIQWERGHAQRVDGQAGAIQAVHR 296
H G + H ED Q H GQAG+ Q H+
Sbjct: 2684 HRGYSGSQASDNEGHSEDSDTQSVSAH-----GQAGSHQQSHQ 2721
Score = 42.4 bits (98), Expect = 6e-04
Identities = 71/315 (22%), Positives = 97/315 (30%), Gaps = 42/315 (13%)
Query: 9 EKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQG-----PGQECGVRGRHSEHQP 63
E+ E+ G S GR + + H Q PG RGR H
Sbjct: 3394 EQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSR--RGRQGSHY- 3450
Query: 64 QQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAG--------------HGHQGPQEAK 109
+Q V HH+ + + Q G+ +A H EA
Sbjct: 3451 EQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEAS 3510
Query: 110 KKPDGS-HRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGH----- 163
+ D S H G G +A + G V D GH E + G + +
Sbjct: 3511 TQADSSRHSQSGQGQSAGPRTSRNQGSSV---SQDSDSQGHSEDSERWSGSASRNHRGSA 3567
Query: 164 LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAST--G 221
+R +R P E + + Q H + GGQ ++H R A G
Sbjct: 3568 QEQSRDGSRHPTSHHEDRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHG 3627
Query: 222 NGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHA 281
+ H Q I HGQ +GH S G H ED Q H
Sbjct: 3628 SHHQQSADSSRHSGIGHGQA---SSAVRDSGHRGS-SGSQASDSEGHSEDSDTQSVSAH- 3682
Query: 282 QRVDGQAGAIQAVHR 296
GQAG Q H+
Sbjct: 3683 ----GQAGPHQQSHQ 3693
Score = 40.4 bits (93), Expect = 0.002
Identities = 66/275 (24%), Positives = 90/275 (32%), Gaps = 45/275 (16%)
Query: 48 PGQECGVR-GRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAA-------- 98
PG G R G H EH V HH+ + + Q G+ +A
Sbjct: 2790 PGSSRGGRQGYHHEHS----VDSSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEE 2845
Query: 99 ----GHGHQGPQ--EAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQ 152
G H G + EA D S G + + + + V D GH E
Sbjct: 2846 QSGDGSRHSGSRHHEASTHADISRHSQAVQGQS--EGSRRSRRQGSSVSQDSDSEGHSED 2903
Query: 153 QGQCPGCPTGHLHPA-----RPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQR 207
+ G + + H + R +R P E + + Q H Q GGQ
Sbjct: 2904 SERWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQA 2963
Query: 208 PTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGIA--- 264
++H R +S G H Q Q+A RH G H A GH G +
Sbjct: 2964 ASSHEQAR--SSAGERHGSHHQ-QSADSSRHS-----GIGHGQASSAVRDSGHRGYSGSQ 3015
Query: 265 ---RHPHQEDGGIQWERGHAQRVDGQAGAIQAVHR 296
H ED Q H GQAG+ Q H+
Sbjct: 3016 ASDNEGHSEDSDTQSVSAH-----GQAGSHQQSHQ 3045
Score = 37.0 bits (84), Expect = 0.024
Identities = 65/295 (22%), Positives = 99/295 (33%), Gaps = 42/295 (14%)
Query: 12 ETTRGILLKSFGREEHGI-EAAVSEGKAHDEGFSPQGPGQECGVR-------GRHSEHQP 63
E+ RG +S GR + + + E G + G G R RHS Q
Sbjct: 1425 ESARGQSGESSGRSRSFLYQVSSHEQSESTHGQTAPSTGGRQGSRHEQARNSSRHSASQD 1484
Query: 64 QQ--VVGCPADKK-----PHHNGCAQRPAASGC----PAQEGTVAAGHGHQGPQEAKKKP 112
Q + G P + +H R SG +G A HG GP+ A ++
Sbjct: 1485 GQDTIRGHPGSSRGGRQGSYHEQSVDRSGHSGYHHSHTTPQGRSDASHGQSGPRSASRQT 1544
Query: 113 DGSHRI-LGAGGAAVVHHTLQPGWEVLLVQPAVDGGG--HGE-QQGQCPGCPTGHLHPAR 168
+ G+ + HH +P+ G H + QG+ G T
Sbjct: 1545 RNEEQSGDGSRHSGSRHH-----------EPSTRAGSSRHSQVGQGESAGSKTSR-RQGS 1592
Query: 169 PLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQR-PTAHCTIRPVASTGNGHCQD 227
+++ S+++E +ES G +Q G R P +H R +GH +
Sbjct: 1593 SVSQDRDSEGHSEDSERRSESASRNHYGSAREQSRHGSRNPRSHQEDR----ASHGHSAE 1648
Query: 228 GQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQ 282
RQ+ RH + G S PG +RH D G Q
Sbjct: 1649 SSRQSG--TRHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSSTDSGTGRRQ 1701
Score = 37.0 bits (84), Expect = 0.024
Identities = 48/225 (21%), Positives = 73/225 (32%), Gaps = 28/225 (12%)
Query: 48 PGQECGVR-GRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQ 106
PG G R G H EH V HH+ + + Q G+ +A + +
Sbjct: 3114 PGSSRGGRQGYHHEHS----VDSSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEE 3169
Query: 107 EAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHP 166
++ D S + HH ++ AV G G ++ + G
Sbjct: 3170 QSG---DSSRHSVSR------HHEASTHADISRHSQAVQGQSEGSRRSRRQGSSVSQ--- 3217
Query: 167 ARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQ 226
+ G E E G+ S + + Q G + P +H R G+GH
Sbjct: 3218 ----DSDSEGHSEDSERWSGSAS-RNHRGSVQEQSRHGSRHPRSHHEDR----AGHGHSA 3268
Query: 227 DGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGIARHPHQED 271
D RQ+ RH + G S PG +RH D
Sbjct: 3269 DRSRQSGT--RHAETSSGGQAASSHEQARSSPGERHGSRHQQSAD 3311
Score = 36.6 bits (83), Expect = 0.032
Identities = 62/264 (23%), Positives = 88/264 (33%), Gaps = 35/264 (13%)
Query: 55 RGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAA------------GHGH 102
RGR H +Q V HH+ + + Q G+ +A G H
Sbjct: 850 RGRQGSHH-EQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSRDGSRH 908
Query: 103 QGPQ--EAKKKPDGS-HRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGC 159
G + EA D S H G G + + + G V D GH E + G
Sbjct: 909 SGSRHHEASSHADISRHSQAGQGQSEGSRTSRRQGSSV---SQDSDSEGHSEDSERWSGS 965
Query: 160 PTGH-----LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTI 214
+ + +R +R P E + + Q H + GGQ ++H
Sbjct: 966 ASRNHRGSAQEQSRHGSRHPRSHHEDRAGHGHSADSSRQSGTPHAETSSGGQAASSHEQA 1025
Query: 215 RPVASTGNGHCQDGQRQTAQQIRHGQV--EQPGGTHPPAGHLPSHPGHHGIARHPHQEDG 272
R +S G H Q Q+A RH + Q +GH S G H E+
Sbjct: 1026 R--SSPGERHGSRHQ-QSADSSRHSGIPRRQASSAVRDSGHWGS-SGSQASDSEGHSEES 1081
Query: 273 GIQWERGHAQRVDGQAGAIQAVHR 296
Q GH GQ G Q H+
Sbjct: 1082 DTQSVSGH-----GQDGPHQQSHQ 1100
Score = 31.6 bits (70), Expect = 1.0
Identities = 55/278 (19%), Positives = 81/278 (29%), Gaps = 45/278 (16%)
Query: 48 PGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAA--------- 98
PG G GR H +Q V HH+ + + Q G+ +A
Sbjct: 520 PGSSRG--GRQGSHH-EQSVNRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRNEEQ 576
Query: 99 ---GHGHQGPQ--EAKKKPDGS-HRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQ 152
G H G + EA + D S H +G G ++ + G V D GH E
Sbjct: 577 SGDGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSV---SQDSDSQGHSED 633
Query: 153 QGQCPGCPTGHLH-----PARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQR 207
+ G + + H +R +R P E + + + H Q GQ
Sbjct: 634 SERWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTRHTQNSSSGQA 693
Query: 208 PTAHCTIRPVAS-------------------TGNGHCQDGQRQTAQQIRHGQVEQPGGTH 248
++H R A TG+G R + + G H
Sbjct: 694 ASSHEQARSSAGERHGSRHQLQSADSSRHSGTGHGQASSAVRDSGHRGSSGSQATDSEGH 753
Query: 249 PPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDG 286
S GH H + G R G
Sbjct: 754 SEDSDTQSVSGHGQAGHHQQSHQESARDRSGERSRRSG 791
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 42.7 bits (99), Expect = 4e-04
Identities = 54/201 (26%), Positives = 73/201 (36%), Gaps = 37/201 (18%)
Query: 7 GSEKLETTRGILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQV 66
G + + RG++ R E G G + + G QGP G RG P +
Sbjct: 950 GPQGIAGQRGVVGLPGQRGERGFPGL--PGPSGEPG--KQGPSGASGERGPPGPMGPPGL 1005
Query: 67 VGCPADKKPHHNGCAQRPAASGCPAQEGTVAA--GHGHQGPQEAKKKPDGSHRILGAGGA 124
G P + +G P A G P ++G+ A G GP P GA GA
Sbjct: 1006 AGPPGE-----SGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAP-------GAPGA 1053
Query: 125 AVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAE 184
PG V PA G GE P G P P+ R P P+ +
Sbjct: 1054 --------PG----PVGPAGKSGDRGETG------PAGPAGPVGPVGARGPAGPQGPRGD 1095
Query: 185 VGTESCQEQDAGIHGQQDDGG 205
G E+ ++ D GI G + G
Sbjct: 1096 KG-ETGEQGDRGIKGHRGFSG 1115
>gi|239757829 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 42.0 bits (97), Expect = 8e-04
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 35/195 (17%)
Query: 61 HQPQQVVGCPADKKPHHN-----GCAQRPAASGCP--AQEGTVAAGHGHQGPQEAKKKPD 113
HQ QV+G PA+ K HH+ Q P A G Q+ +A GH QG Q+A
Sbjct: 21 HQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKA----- 75
Query: 114 GSHRILGAGGAAVVHHTLQPGWEVLLVQPAV----------DGGGHGEQQGQCPGCPTGH 163
SH++ A H WEV+L V D GE+Q + P G
Sbjct: 76 -SHQLQHPQSRAA--HL----WEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE 128
Query: 164 LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAS--TG 221
H R G + V ++ Q++ + + ++G T H G
Sbjct: 129 GHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEG----TCHFAEARAKDPLDG 184
Query: 222 NGHCQDGQRQTAQQI 236
+ HC + Q Q Q++
Sbjct: 185 SVHCPERQCQHQQRV 199
>gi|239752340 PREDICTED: hypothetical protein XP_002348205 [Homo
sapiens]
Length = 218
Score = 42.0 bits (97), Expect = 8e-04
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 35/195 (17%)
Query: 61 HQPQQVVGCPADKKPHHN-----GCAQRPAASGCP--AQEGTVAAGHGHQGPQEAKKKPD 113
HQ QV+G PA+ K HH+ Q P A G Q+ +A GH QG Q+A
Sbjct: 37 HQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKA----- 91
Query: 114 GSHRILGAGGAAVVHHTLQPGWEVLLVQPAV----------DGGGHGEQQGQCPGCPTGH 163
SH++ A H WEV+L V D GE+Q + P G
Sbjct: 92 -SHQLQHPQSRAA--HL----WEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE 144
Query: 164 LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAS--TG 221
H R G + V ++ Q++ + + ++G T H G
Sbjct: 145 GHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEG----TCHFAEARAKDPLDG 200
Query: 222 NGHCQDGQRQTAQQI 236
+ HC + Q Q Q++
Sbjct: 201 SVHCPERQCQHQQRV 215
>gi|239751859 PREDICTED: similar to LMARRLC1A [Homo sapiens]
Length = 279
Score = 42.0 bits (97), Expect = 8e-04
Identities = 52/197 (26%), Positives = 75/197 (38%), Gaps = 26/197 (13%)
Query: 94 GTVAAGHGHQGPQEAKKKPD-GSHRILGAGGAAVVHHTLQPGWEVLLVQPA--------- 143
G + + G EA +PD SHR G G + + PG +V
Sbjct: 53 GPITDSNDGHGCAEANDEPDDASHRQHGNGHIYPLFRVVGPGRKVKSAGYCPRFTRYCSH 112
Query: 144 VDGGGHGEQQGQCPGCPTGHL----HPARPLNRRPPGRPESQEAEVGTESCQE---QDAG 196
+ E+Q PG P HL H A L P ++ A E QE +
Sbjct: 113 TNDNWQCEEQSHHPG-PNDHLLGQAHGAVVLG--PDWMQDANTAVQSNEGDQEDTSEQVD 169
Query: 197 IHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPS 256
+H +D+ Q P RP++S G ++ Q ++ HGQV+ G S
Sbjct: 170 VHYGKDEFAQEPAE----RPMSSHGLPDHEEWQSGGETEVSHGQVQVTDGGDCVCHPESS 225
Query: 257 HPGHHGIARHPHQEDGG 273
HP H +A+ P ED G
Sbjct: 226 HPDHKPVAQDP--EDKG 240
>gi|239746853 PREDICTED: hypothetical protein XP_002343864 [Homo
sapiens]
Length = 218
Score = 42.0 bits (97), Expect = 8e-04
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 35/195 (17%)
Query: 61 HQPQQVVGCPADKKPHHN-----GCAQRPAASGCP--AQEGTVAAGHGHQGPQEAKKKPD 113
HQ QV+G PA+ K HH+ Q P A G Q+ +A GH QG Q+A
Sbjct: 37 HQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKA----- 91
Query: 114 GSHRILGAGGAAVVHHTLQPGWEVLLVQPAV----------DGGGHGEQQGQCPGCPTGH 163
SH++ A H WEV+L V D GE+Q + P G
Sbjct: 92 -SHQLQHPQSRAA--HL----WEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE 144
Query: 164 LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAS--TG 221
H R G + V ++ Q++ + + ++G T H G
Sbjct: 145 GHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEG----TCHFAEARAKDPLDG 200
Query: 222 NGHCQDGQRQTAQQI 236
+ HC + Q Q Q++
Sbjct: 201 SVHCPERQCQHQQRV 215
>gi|239746350 PREDICTED: hypothetical protein XP_002343735 [Homo
sapiens]
Length = 279
Score = 42.0 bits (97), Expect = 8e-04
Identities = 52/197 (26%), Positives = 75/197 (38%), Gaps = 26/197 (13%)
Query: 94 GTVAAGHGHQGPQEAKKKPD-GSHRILGAGGAAVVHHTLQPGWEVLLVQPA--------- 143
G + + G EA +PD SHR G G + + PG +V
Sbjct: 53 GPITDSNDGHGCAEANDEPDDASHRQHGNGHIYPLFRVVGPGRKVKSAGYCPRFTRYCSH 112
Query: 144 VDGGGHGEQQGQCPGCPTGHL----HPARPLNRRPPGRPESQEAEVGTESCQE---QDAG 196
+ E+Q PG P HL H A L P ++ A E QE +
Sbjct: 113 TNDNWQCEEQSHHPG-PNDHLLGQAHGAVVLG--PDWMQDANTAVQSNEGDQEDTSEQVD 169
Query: 197 IHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPS 256
+H +D+ Q P RP++S G ++ Q ++ HGQV+ G S
Sbjct: 170 VHYGKDEFAQEPAE----RPMSSHGLPDHEEWQSGGETEVSHGQVQVTDGGDCVCHPESS 225
Query: 257 HPGHHGIARHPHQEDGG 273
HP H +A+ P ED G
Sbjct: 226 HPDHKPVAQDP--EDKG 240
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 41.2 bits (95), Expect = 0.001
Identities = 54/240 (22%), Positives = 72/240 (30%), Gaps = 36/240 (15%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQE 93
S G H E S Q G G G S H G + C Q A SG +
Sbjct: 581 SSGLGHQESRSGQSSGY--GQHGSSSGHSSTH--GQHGSTSGQSSSCGQHGATSGQSSSH 636
Query: 94 GTVAAG------HGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVL-----LVQP 142
G +G +G QG + G H ++ H GW V
Sbjct: 637 GQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSG 696
Query: 143 AVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQD 202
G GH GQ G + R G Q + + +GQ
Sbjct: 697 QSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHG 756
Query: 203 DGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHG 262
G + S+G+G G + ++RHG +GH SH G HG
Sbjct: 757 SGSHQ-----------SSGHGRQGSGSGHSPSRVRHGS---------SSGHSSSH-GQHG 795
Score = 37.0 bits (84), Expect = 0.024
Identities = 60/262 (22%), Positives = 83/262 (31%), Gaps = 41/262 (15%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQE 93
S G H E S Q G G G S H G + C Q A+SG +
Sbjct: 1047 SSGLGHRESRSGQSSGY--GQHGSSSGHSSTH--GQHGSTSGQSSSCGQHGASSGQSSSH 1102
Query: 94 G------TVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGG 147
G + ++G+G QG + G + H G + G
Sbjct: 1103 GQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSG-------RSSSSG 1155
Query: 148 GHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQR 207
HG G+ G GH S ++ G+ S G HG + R
Sbjct: 1156 QHGSGLGESSG--FGH--------HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSR 1205
Query: 208 PTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPA--------GHLPSHPG 259
H + +S+ G G RQ++ R G G H P+ GH SH G
Sbjct: 1206 GERHGS-SSGSSSHYGQHGSGSRQSSGHGRQGS----GSGHSPSRGRHGSGLGHSSSH-G 1259
Query: 260 HHGIARHPHQEDGGIQWERGHA 281
HG G + GH+
Sbjct: 1260 QHGSGSGRSSSRGPYESRSGHS 1281
Score = 36.6 bits (83), Expect = 0.032
Identities = 60/262 (22%), Positives = 83/262 (31%), Gaps = 41/262 (15%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQE 93
S G H E S Q G G G S H G + C Q A+SG +
Sbjct: 1987 SSGLGHRESRSGQSSGY--GQHGSSSGHSSTH--GQHGSASGQSSSCGQHGASSGQSSSH 2042
Query: 94 G------TVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGG 147
G + ++G+G QG + G + H G + G
Sbjct: 2043 GQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSG-------RSSSSG 2095
Query: 148 GHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQR 207
HG G+ G GH S ++ G+ S G HG + R
Sbjct: 2096 QHGPGLGESSG--FGH--------HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSR 2145
Query: 208 PTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPP--------AGHLPSHPG 259
H + +S+ G G RQ++ R G G H P +GH SH G
Sbjct: 2146 GERHGS-SSGSSSRYGQHGSGSRQSSGHGRQGS----GSGHSPSRGRHGSGSGHSSSH-G 2199
Query: 260 HHGIARHPHQEDGGIQWERGHA 281
HG G + GH+
Sbjct: 2200 QHGSGSGRSSSRGPYESRSGHS 2221
Score = 35.4 bits (80), Expect = 0.070
Identities = 59/258 (22%), Positives = 81/258 (31%), Gaps = 33/258 (12%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQE 93
S G H E S Q G G G S H G + C Q A+SG +
Sbjct: 1517 SSGLGHRESRSGQSSGY--GQHGSSSGHSSTH--GQHGSTSGQSSSCGQHGASSGQSSSH 1572
Query: 94 G------TVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGG 147
G + ++G+G QG + G + H G + G
Sbjct: 1573 GQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSG-------RSSSSG 1625
Query: 148 GHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQR 207
HG G+ G GH S ++ G+ S G HG + R
Sbjct: 1626 QHGSGLGESSG--FGH--------HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSR 1675
Query: 208 PTAHCTIRPVASTGNGHCQDGQRQTAQQIRH----GQVEQPGGTHPPAGHLPSHPGHHGI 263
H + +S+ G G RQ++ R GQ G GH SH G HG
Sbjct: 1676 GERHGS-SSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH-GQHGS 1733
Query: 264 ARHPHQEDGGIQWERGHA 281
G + GH+
Sbjct: 1734 GSGRSSSRGPYESRSGHS 1751
Score = 35.0 bits (79), Expect = 0.092
Identities = 57/284 (20%), Positives = 85/284 (29%), Gaps = 54/284 (19%)
Query: 20 KSFGREEHGIEAAVS---------EGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCP 70
+S G +HG + S G +SP G G G S P +
Sbjct: 2402 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGS-----GWSSSRGPYE----- 2451
Query: 71 ADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHT 130
H +G R + SG ++G+G G G H ++ H
Sbjct: 2452 -SGSGHSSGLGHRESRSG-------QSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHG 2503
Query: 131 LQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQ-EAEVGTES 189
G + G HG Q G R+ G +S + G+ S
Sbjct: 2504 ASSG-------QSSSHGQHGSGSSQSSG-----------YGRQGSGSGQSPGHGQRGSGS 2545
Query: 190 CQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ-------VE 242
Q G HG H + S+G GH + Q++ +HG
Sbjct: 2546 RQSPSYGRHGSGSGRSSSSGQHGS-GLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYG 2604
Query: 243 QPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDG 286
Q G + H G + H Q G + GH ++ G
Sbjct: 2605 QHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSG 2648
Score = 35.0 bits (79), Expect = 0.092
Identities = 59/258 (22%), Positives = 81/258 (31%), Gaps = 33/258 (12%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQE 93
S G H E S Q G G G S H G + C Q A+SG +
Sbjct: 2457 SSGLGHRESRSGQSSGY--GQHGSSSGHSSTH--GQHGSTSGQSSSCGQHGASSGQSSSH 2512
Query: 94 G------TVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGG 147
G + ++G+G QG + G + H G + G
Sbjct: 2513 GQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSG-------RSSSSG 2565
Query: 148 GHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQR 207
HG G+ G GH S ++ G+ S G HG + R
Sbjct: 2566 QHGSGLGESSG--FGH--------HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSR 2615
Query: 208 PTAHCTIRPVASTGNGHCQDGQRQTAQQIRH----GQVEQPGGTHPPAGHLPSHPGHHGI 263
H + +S+ G G RQ++ R GQ G GH SH G HG
Sbjct: 2616 GERHGS-SSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH-GQHGS 2673
Query: 264 ARHPHQEDGGIQWERGHA 281
G + GH+
Sbjct: 2674 GSGRSSSRGPYESRLGHS 2691
Score = 34.3 bits (77), Expect = 0.16
Identities = 60/288 (20%), Positives = 90/288 (31%), Gaps = 53/288 (18%)
Query: 21 SFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVV--------GCPAD 72
S+G+ G ++ G+ H G S Q P RGRH Q G +
Sbjct: 982 SYGQHGSGSRQSLGHGQ-HGSG-SGQSPSPS---RGRHGSGSGQSSSYGPYRSGSGWSSS 1036
Query: 73 KKP------HHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAV 126
+ P H +G R + SG ++G+G G G H ++
Sbjct: 1037 RGPYESGSGHSSGLGHRESRSG-------QSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 1089
Query: 127 VHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQ-EAEV 185
H G + G HG Q G R+ G +S +
Sbjct: 1090 GQHGASSG-------QSSSHGQHGSGSSQSSG-----------YGRQGSGSGQSPGHGQR 1131
Query: 186 GTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQ----- 240
G+ S Q G HG H + S+G GH + Q++ +HG
Sbjct: 1132 GSGSRQSPSYGRHGSGSGRSSSSGQHGS-GLGESSGFGHHESSSGQSSSYSQHGSGSGHS 1190
Query: 241 --VEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDG 286
Q G + H G + H Q G + GH ++ G
Sbjct: 1191 SGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSG 1238
Score = 33.9 bits (76), Expect = 0.20
Identities = 55/256 (21%), Positives = 75/256 (29%), Gaps = 48/256 (18%)
Query: 39 HDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCAQRPAASGCPAQEGTVAA 98
H G G C H E Q G + G +Q +ASG + +G +
Sbjct: 787 HSSSHGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGS 846
Query: 99 GHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQQGQCPG 158
G G G +A H A G HG GQ PG
Sbjct: 847 TSGQSSSSGQHDSSSGQSSSYGQHESASHH--------------ASGRGRHGSGSGQSPG 892
Query: 159 CPTGHLHPARPLNRRPPGRPESQE-AEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPV 217
+R G +S G+ S + +G HG GQ
Sbjct: 893 -----------HGQRGSGSGQSPSYGRHGSGSGRSSSSGRHG--SGSGQ----------- 928
Query: 218 ASTGNGHCQDGQRQTAQQIRHG-------QVEQPGGTHPPAGHLPSHPGHHGIARHPHQE 270
S+G GH + Q++ +HG EQ G + H G + Q
Sbjct: 929 -SSGFGH-KSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQH 986
Query: 271 DGGIQWERGHAQRVDG 286
G + GH Q G
Sbjct: 987 GSGSRQSLGHGQHGSG 1002
Score = 32.3 bits (72), Expect = 0.60
Identities = 56/277 (20%), Positives = 85/277 (30%), Gaps = 40/277 (14%)
Query: 20 KSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNG 79
+S G +HG + S + S G G G S + G H +G
Sbjct: 1932 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSR--GPYESGSGHSSG 1989
Query: 80 CAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLL 139
R + SG ++G+G G G H ++ H G
Sbjct: 1990 LGHRESRSG-------QSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSG----- 2037
Query: 140 VQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQ-EAEVGTESCQEQDAGIH 198
+ G HG Q G R+ G +S + G+ S Q G H
Sbjct: 2038 --QSSSHGQHGSGSSQSSG-----------YGRQGSGSGQSPGHGQRGSGSRQSPSYGRH 2084
Query: 199 GQQDDGGQRPTAHCTIRP--VASTGNGHCQDGQRQTAQQIRHGQ-------VEQPGGTHP 249
G G R ++ P S+G GH + Q++ +HG Q G
Sbjct: 2085 G---SGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 2141
Query: 250 PAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDG 286
+ H G + Q G + GH ++ G
Sbjct: 2142 QSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSG 2178
Score = 32.0 bits (71), Expect = 0.78
Identities = 57/280 (20%), Positives = 90/280 (32%), Gaps = 53/280 (18%)
Query: 20 KSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNG 79
+S G +HG G + +G GQ S + G H +G
Sbjct: 357 QSSGYSKHGS----GSGHSSSQGQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSG 412
Query: 80 CAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLL 139
Q + SG + GHG +G + G H ++ + G+
Sbjct: 413 RGQHSSGSG-------QSPGHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYS--- 462
Query: 140 VQPAVDGGGHGE----------QQGQCPGCPTGH-LHPARPLNRRPPGRPESQEAEVGTE 188
G GH E Q G G +GH H +R R E Q + G+
Sbjct: 463 -----SGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSR---SGQSSRGERQGSSAGSS 514
Query: 189 SCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTH 248
S +GQ G ++ H + G+G GQ + + RH + ++
Sbjct: 515 SS-------YGQHGSGSRQSLGH------SRHGSG---SGQSPSPSRGRHESGSRQSSSY 558
Query: 249 PPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQA 288
P G+ G P++ G GH + GQ+
Sbjct: 559 GPHGYGSGRSSSRG----PYESGSGHSSGLGHQESRSGQS 594
Score = 31.6 bits (70), Expect = 1.0
Identities = 33/144 (22%), Positives = 47/144 (32%), Gaps = 8/144 (5%)
Query: 147 GGHGEQQGQCPGCPT---GHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDD 203
G HG GQ T G + + S ++ G+ S G HG +
Sbjct: 206 GQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSG 265
Query: 204 GGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGI 263
R H + +S+ H G RQ+ R G + +H G H HG
Sbjct: 266 QSSRGERHRSSSGSSSSYGQH-GSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHG- 323
Query: 264 ARHPHQEDGGIQWERGHAQRVDGQ 287
H + RGH + GQ
Sbjct: 324 ---QHGSGSSYSYSRGHYESGSGQ 344
Score = 31.2 bits (69), Expect = 1.3
Identities = 57/284 (20%), Positives = 84/284 (29%), Gaps = 54/284 (19%)
Query: 20 KSFGREEHGIEAAVS---------EGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCP 70
+S G +HG + S G +SP G G G S P +
Sbjct: 1462 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGS-----GWSSSRGPYE----- 1511
Query: 71 ADKKPHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHT 130
H +G R + SG ++G+G G G H ++ H
Sbjct: 1512 -SGSSHSSGLGHRESRSG-------QSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHG 1563
Query: 131 LQPGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQ-EAEVGTES 189
G + G HG Q G R+ G +S + G+ S
Sbjct: 1564 ASSG-------QSSSHGQHGSGSSQSSG-----------YGRQGSGSGQSPGHGQRGSGS 1605
Query: 190 CQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPG---G 246
Q G HG H + S+G GH + Q++ +HG G
Sbjct: 1606 RQSPSYGRHGSGSGRSSSSGQHGS-GLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYG 1664
Query: 247 THPPAGHLPSHPGHHGIARHPH----QEDGGIQWERGHAQRVDG 286
H S HG + Q G + GH ++ G
Sbjct: 1665 QHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSG 1708
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 40.8 bits (94), Expect = 0.002
Identities = 66/275 (24%), Positives = 91/275 (33%), Gaps = 70/275 (25%)
Query: 23 GREEHGIEAAV--SEGKAHDEGFSPQGPGQECGVR--GR----HSEHQPQQVVGCPADKK 74
G HG + + G G S G + G R GR HSE +V ++
Sbjct: 2137 GSAIHGRQGTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEV---HSEAS 2193
Query: 75 PHHNGCAQRPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPG 134
P H+G A S Q G+ +GHG QG + H H+
Sbjct: 2194 PTHSGHTHSQAGSR-HGQSGS--SGHGRQGTTHGQTGDTTRH----------AHY----- 2235
Query: 135 WEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQD 194
G G Q+G +R RR G ES ++EV +
Sbjct: 2236 -----------GYGQSTQRG------------SRTTGRRGSGHSESSDSEVHSWGSHTHS 2272
Query: 195 AGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHG-----QVEQPGGTHP 249
I GQ ++P ST +G + QT RHG Q Q G
Sbjct: 2273 GHIQGQAGSQQRQP---------GSTVHGRLETTHGQTGDTTRHGHSGYGQSTQTGSRSS 2323
Query: 250 PAGHLPSHPG---HHGIAR-HPHQEDGGIQWERGH 280
A H SH HG ++ H G +++ GH
Sbjct: 2324 RASHFQSHSSERQRHGSSQVWKHGSYGPAEYDYGH 2358
Score = 33.1 bits (74), Expect = 0.35
Identities = 30/111 (27%), Positives = 39/111 (35%), Gaps = 19/111 (17%)
Query: 177 RPESQEAEVGTESCQEQDAG---------IHGQQDDGGQRPTAHCTIRPVASTGNGHCQD 227
RP+SQE G Q ++G HGQ D T H ST G
Sbjct: 1439 RPQSQEQTHGQAGSQHGESGSTVHGRHGTTHGQTGD----TTRHAHYHHGKSTQRGSSTT 1494
Query: 228 GQRQTAQQIRHGQVEQPGGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWER 278
G+R + GG+H +GH HG + H E I +R
Sbjct: 1495 GRRGSGHSESSDSEVHSGGSHTHSGHT------HGQSGSQHGESESIIHDR 1539
Score = 31.6 bits (70), Expect = 1.0
Identities = 44/170 (25%), Positives = 56/170 (32%), Gaps = 38/170 (22%)
Query: 149 HGEQQGQCPGCPTGHLHP---------ARPLNRRPPGRPESQEAEVGTESCQEQDAGIHG 199
HG GQ G T H H +R RR G E ++E + Q + H
Sbjct: 1767 HGTIHGQT-GDTTRHAHSGHGQSTQTGSRTTGRRSSGHSEYSDSEGHSGFSQRPHSRGHT 1825
Query: 200 QQDDGGQRPTA-------HCTIRPVASTGNGHCQDGQRQTAQ-------QIRHGQVEQP- 244
G Q + H T +GH Q G Q+ Q + R G E
Sbjct: 1826 HGQAGSQHGESESIVDERHGTTHGQTGDTSGHSQSGHGQSTQSGSSTTGRRRSGHSESSD 1885
Query: 245 -----GGTHPPAGHLPSHPGHHGIARHPHQEDGGIQWERGHAQRVDGQAG 289
GG+H +GH H AR H E +R Q GQ G
Sbjct: 1886 SEVHSGGSHTHSGHT------HSQARSQHGESESTVHKR--HQTTHGQTG 1927
Score = 31.2 bits (69), Expect = 1.3
Identities = 58/252 (23%), Positives = 81/252 (32%), Gaps = 42/252 (16%)
Query: 21 SFGREEHG---IEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHH 77
S G++ HG +E K+H G E G E + + C + H
Sbjct: 191 SGGKDRHGSSSVELRERINKSHISPSRESGEEYESGSGSNSWERKGHGGLSCGLETSGHE 250
Query: 78 NGCAQ-----RPAASGCPAQEGTVAAGH--------GHQGPQEAKKKPDGSHRILGAGGA 124
+ Q + S C + H G PQ A SHR G G
Sbjct: 251 SNSTQSRIREQKLGSSCSGSGDSGRRSHACGYSNSSGCGRPQNASSSCQ-SHRFGGQGNQ 309
Query: 125 AVVHHTLQPGWEVLLVQPAVDGG-GHG-EQQGQCPGC------PTGHLHPARPLNRRPPG 176
+Q G Q + GG GHG GQ GC P + R R G
Sbjct: 310 ---FSYIQSG-----CQSGIKGGQGHGCVSGGQPSGCGQPESNPCSQSYSQRGYGARENG 361
Query: 177 RPESQEAEVGTESCQEQDAGIHG----QQDDGGQRPTAHCTIRPVASTGNGHCQ-----D 227
+P++ + T S Q G +G Q GQ C +S+ N +
Sbjct: 362 QPQNCGGQWRTGSSQSSCCGQYGSGGSQSCSNGQHEYGSCGRFSNSSSSNEFSKCDQYGS 421
Query: 228 GQRQTAQQIRHG 239
G Q+ +HG
Sbjct: 422 GSSQSTSFEQHG 433
Score = 30.0 bits (66), Expect = 3.0
Identities = 51/237 (21%), Positives = 80/237 (33%), Gaps = 24/237 (10%)
Query: 23 GREEHGIEAAVS-------EGKAHDEGFSPQGPG--QECGVRGRHSEHQPQQVVGCPADK 73
G +HG+ + S G GF G G Q G G+H Q G +
Sbjct: 566 GFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGF-GQHESRSGQSSYGQHSSG 624
Query: 74 KPHHNGCAQ----RPAASGCPAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAG-GAAVVH 128
+G Q + + G + + G G G + G H + G+G +
Sbjct: 625 SSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSSGFGQH-VSGSGQSSGFGQ 683
Query: 129 HTLQPGWEV-----LLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEA 183
H + G + G HG GQ G L + + G Q +
Sbjct: 684 HESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSGSGQSS 743
Query: 184 EVGTE-SCQEQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHG 239
G S Q +G + GQ +++ +S +G+ Q G RQT+ +HG
Sbjct: 744 GFGQHGSGSGQSSGFGQHESRSGQ--SSYGQHSSGSSQSSGYGQHGSRQTSGFGQHG 798
>gi|239757352 PREDICTED: similar to LMARRLC1A [Homo sapiens]
Length = 279
Score = 40.4 bits (93), Expect = 0.002
Identities = 51/197 (25%), Positives = 75/197 (38%), Gaps = 26/197 (13%)
Query: 94 GTVAAGHGHQGPQEAKKKPD-GSHRILGAGGAAVVHHTLQPGWEVLLVQPA--------- 143
G + + G EA +PD SHR G G + + PG +V
Sbjct: 53 GPITDSNDGHGCAEANDEPDDASHRQHGNGHLYPLFRVVGPGRKVKSAGYCPRFTRYCSH 112
Query: 144 VDGGGHGEQQGQCPGCPTGHL----HPARPLNRRPPGRPESQEAEVGTESCQE---QDAG 196
+ E+Q PG P HL H A L P ++ A E QE +
Sbjct: 113 TNDNWQCEEQSHHPG-PNDHLLGQAHGAVVLG--PDWMQDANTAVQSNEGDQEDTSEQVD 169
Query: 197 IHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPS 256
+H +++ Q P RP++S G ++ Q ++ HGQV+ G S
Sbjct: 170 VHYGKEEFAQEPAE----RPMSSHGLPDHEEWQSGGETEVSHGQVQVTDGGDCVCHPESS 225
Query: 257 HPGHHGIARHPHQEDGG 273
HP H +A+ P ED G
Sbjct: 226 HPDHKPVAQDP--EDKG 240
>gi|239744358 PREDICTED: hypothetical protein XP_002343105 [Homo
sapiens]
Length = 767
Score = 40.4 bits (93), Expect = 0.002
Identities = 50/179 (27%), Positives = 67/179 (37%), Gaps = 19/179 (10%)
Query: 25 EEHGIEA--AVSEGKAHDEG-FSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCA 81
EEHG++ +V E DEG G + C G + ++ G + GC
Sbjct: 49 EEHGVKGVESVLEKGVLDEGVLEAWGCCRRCRHAGWNRSQPSPELAGAVIHARAPAVGCR 108
Query: 82 QRPAASGC---------PAQEGTVAAGHGHQGP-QEAKKKPDGSHRIL--GAGGAAVVHH 129
QR P QE P E +KP+GS + G G AV
Sbjct: 109 QRSGHLHVRLKQRLLERPCQEPLGKKYQLELPPLYERARKPEGSKNLPADGQGLRAVRAD 168
Query: 130 TLQPGWEVLLVQP---AVDGGGHGEQQGQCPGCPTGHLH-PARPLNRRPPGRPESQEAE 184
P W +P A + G G+ QGQ P T HL P P +PE++EAE
Sbjct: 169 AALPVWPGGPGRPGPHAPEAGAEGQHQGQWPPADTRHLRTPKWPYKVATEEKPEAEEAE 227
>gi|14249622 ajuba isoform 1 [Homo sapiens]
Length = 538
Score = 40.0 bits (92), Expect = 0.003
Identities = 45/138 (32%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 81 AQRPAASGC--------PA--QEGTVA-AGHGHQGPQEAKKKPDGSHRILGAGGAAVVHH 129
AQRPA GC PA G +A AG G GP E + G H + G G A V
Sbjct: 216 AQRPAGFGCQESRHSYPPALGSPGALAGAGVGAAGPLERRGAQPGRHSVTGYGDCA-VGA 274
Query: 130 TLQPGWEVLLVQPAVDGGGHGEQQGQCPGC-PTGHLHPARPL----NRRPPGRPESQEAE 184
Q LL GG +G+ G P+G P P R PE++E
Sbjct: 275 RYQDELTALLRLTVGTGGREAGARGEPSGIEPSGLEEPPGPFVPEAARARMREPEAREDY 334
Query: 185 VGTESCQEQDAGIHGQQD 202
GT C + + GI+GQ +
Sbjct: 335 FGT--CIKCNKGIYGQSN 350
>gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens]
Length = 525
Score = 39.7 bits (91), Expect = 0.004
Identities = 38/140 (27%), Positives = 48/140 (34%), Gaps = 26/140 (18%)
Query: 146 GGGHGEQQGQCPGCPTG---HLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQD 202
GG + P P G H HP +P PP P+ ++ HG
Sbjct: 266 GGHERSSTTKPPFKPHGSRDHHHPHKPHEHGPPPPPDERDHS-------------HGPPL 312
Query: 203 DGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHL-PSHP-GH 260
G P + P++ + CQ T RH HP H HP GH
Sbjct: 313 PQGPPP-----LLPMSCSS---CQHATFGTNGAQRHSHNNNSSDLHPHKHHSHEQHPHGH 364
Query: 261 HGIARHPHQEDGGIQWERGH 280
H A HPH+ D Q GH
Sbjct: 365 HPHAHHPHEHDTHRQHPHGH 384
>gi|239755481 PREDICTED: similar to Putative uncharacterized protein
ENSP00000334305 [Homo sapiens]
Length = 771
Score = 39.3 bits (90), Expect = 0.005
Identities = 50/183 (27%), Positives = 66/183 (36%), Gaps = 23/183 (12%)
Query: 25 EEHGIEA--AVSEGKAHDEG-FSPQGPGQECGVRGRHSEHQPQQVVGCPADKKPHHNGCA 81
EEHG++ +V E DEG G + C G + ++ G + GC
Sbjct: 49 EEHGVKGVESVLEKGVLDEGVLEAWGCCRRCRHAGWNRSQPSPELAGAVVHARAPAVGCR 108
Query: 82 QRPAASGC---------PAQEGTVAAGHGHQGP-QEAKKKPDGSHRIL--GAGGAAVVHH 129
QR P QE P E +KP+GS + G G AV
Sbjct: 109 QRSGHLHVRLKQRLLERPCQEPLGKKYQLELPPLYERARKPEGSKNLPADGQGLRAVRAD 168
Query: 130 TLQPGWE-------VLLVQPAVDGGGHGEQQGQCPGCPTGHLH-PARPLNRRPPGRPESQ 181
P W PA + G G+ QGQ P T HL P P +PE++
Sbjct: 169 AALPVWPGGPGRPGSRAHLPAPEAGAEGQHQGQWPPADTRHLRTPKWPYKVVTEEKPEAE 228
Query: 182 EAE 184
EAE
Sbjct: 229 EAE 231
>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 16 GILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKP 75
G L S GR+ H + + V +G+A + G++G+H+ H P G P P
Sbjct: 175 GKCLGSAGRQRHVVHSGVGQGQAQ----------AKAGLQGQHAVHLPGWPQGVPLGNGP 224
Query: 76 HHNGCAQRPAASGCPAQEGT-VAAGHGHQGPQEAKKKPDGSHRI 118
G P G P GT V +G ++A PD H++
Sbjct: 225 PGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQA-AVPDSQHQV 267
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 37.7 bits (86), Expect = 0.014
Identities = 71/271 (26%), Positives = 95/271 (35%), Gaps = 44/271 (16%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKP-HHNGCAQRPAASGCPAQ 92
SEG + GF G E G++G+ + +G P + P + Q G P
Sbjct: 310 SEGVKGNRGFP--GLMGEDGIKGQKGD------IGPPGFRGPTEYYDTYQEKGDEGTPGP 361
Query: 93 EGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQ 152
G G +GPQ P G + G+ G++ PGW L + G G+
Sbjct: 362 PGP----RGARGPQG----PSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG-ERGRPGKD 412
Query: 153 QGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDA-----GIHGQQDDGGQR 207
PG P P P + PPG P G GI G G+
Sbjct: 413 AMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGE- 471
Query: 208 PTAHCTIRPVASTGNG-------HCQDG--QRQTAQQIRHGQVEQPGGTHPPAGHLPSHP 258
P CT P G H G RQ A ++ G PG T LP P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLK-GSPGSPGNTG-----LPGFP 525
Query: 259 GHHGIARHPHQEDGGIQWERGHAQRVDGQAG 289
G G Q D G++ E+G + +GQ G
Sbjct: 526 GFPGA-----QGDPGLKGEKGETLQPEGQVG 551
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 37.7 bits (86), Expect = 0.014
Identities = 71/271 (26%), Positives = 95/271 (35%), Gaps = 44/271 (16%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKP-HHNGCAQRPAASGCPAQ 92
SEG + GF G E G++G+ + +G P + P + Q G P
Sbjct: 310 SEGVKGNRGFP--GLMGEDGIKGQKGD------IGPPGFRGPTEYYDTYQEKGDEGTPGP 361
Query: 93 EGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQ 152
G G +GPQ P G + G+ G++ PGW L + G G+
Sbjct: 362 PGP----RGARGPQG----PSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG-ERGRPGKD 412
Query: 153 QGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDA-----GIHGQQDDGGQR 207
PG P P P + PPG P G GI G G+
Sbjct: 413 AMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGE- 471
Query: 208 PTAHCTIRPVASTGNG-------HCQDG--QRQTAQQIRHGQVEQPGGTHPPAGHLPSHP 258
P CT P G H G RQ A ++ G PG T LP P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLK-GSPGSPGNTG-----LPGFP 525
Query: 259 GHHGIARHPHQEDGGIQWERGHAQRVDGQAG 289
G G Q D G++ E+G + +GQ G
Sbjct: 526 GFPGA-----QGDPGLKGEKGETLQPEGQVG 551
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 37.7 bits (86), Expect = 0.014
Identities = 71/271 (26%), Positives = 95/271 (35%), Gaps = 44/271 (16%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKP-HHNGCAQRPAASGCPAQ 92
SEG + GF G E G++G+ + +G P + P + Q G P
Sbjct: 310 SEGVKGNRGFP--GLMGEDGIKGQKGD------IGPPGFRGPTEYYDTYQEKGDEGTPGP 361
Query: 93 EGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQ 152
G G +GPQ P G + G+ G++ PGW L + G G+
Sbjct: 362 PGP----RGARGPQG----PSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG-ERGRPGKD 412
Query: 153 QGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDA-----GIHGQQDDGGQR 207
PG P P P + PPG P G GI G G+
Sbjct: 413 AMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGE- 471
Query: 208 PTAHCTIRPVASTGNG-------HCQDG--QRQTAQQIRHGQVEQPGGTHPPAGHLPSHP 258
P CT P G H G RQ A ++ G PG T LP P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLK-GSPGSPGNTG-----LPGFP 525
Query: 259 GHHGIARHPHQEDGGIQWERGHAQRVDGQAG 289
G G Q D G++ E+G + +GQ G
Sbjct: 526 GFPGA-----QGDPGLKGEKGETLQPEGQVG 551
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 37.7 bits (86), Expect = 0.014
Identities = 71/271 (26%), Positives = 95/271 (35%), Gaps = 44/271 (16%)
Query: 34 SEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKP-HHNGCAQRPAASGCPAQ 92
SEG + GF G E G++G+ + +G P + P + Q G P
Sbjct: 310 SEGVKGNRGFP--GLMGEDGIKGQKGD------IGPPGFRGPTEYYDTYQEKGDEGTPGP 361
Query: 93 EGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVVHHTLQPGWEVLLVQPAVDGGGHGEQ 152
G G +GPQ P G + G+ G++ PGW L + G G+
Sbjct: 362 PGP----RGARGPQG----PSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG-ERGRPGKD 412
Query: 153 QGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDA-----GIHGQQDDGGQR 207
PG P P P + PPG P G GI G G+
Sbjct: 413 AMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGE- 471
Query: 208 PTAHCTIRPVASTGNG-------HCQDG--QRQTAQQIRHGQVEQPGGTHPPAGHLPSHP 258
P CT P G H G RQ A ++ G PG T LP P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLK-GSPGSPGNTG-----LPGFP 525
Query: 259 GHHGIARHPHQEDGGIQWERGHAQRVDGQAG 289
G G Q D G++ E+G + +GQ G
Sbjct: 526 GFPGA-----QGDPGLKGEKGETLQPEGQVG 551
>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
Length = 1445
Score = 37.7 bits (86), Expect = 0.014
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 11/143 (7%)
Query: 138 LLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGI 197
L +V G QG C G P + + PG P+++ + ++ D G
Sbjct: 1150 LSTSQSVSGKNMTASQGPCALLWKGGDSPGQ----QEPGSPKAKAPQKSQKTLGCADKGE 1205
Query: 198 HGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTA---QQIRHGQVEQPGGTHPPAGHL 254
++ G++ H + P S +G Q + Q+ ++ Q++ G PP H
Sbjct: 1206 AHRRPRTGEQ--GHRSKGPRTSEASGRSHPAQAREIGDKQERKYNQLQLEKGQTPPESHF 1263
Query: 255 PSHPGHHGIARHPHQEDGGIQWE 277
HH HP + GG +WE
Sbjct: 1264 QRKISHHPQGLHPRK--GGTRWE 1284
>gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens]
Length = 531
Score = 37.0 bits (84), Expect = 0.024
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 23/113 (20%)
Query: 81 AQRPAASGCPAQEGTVAAGHGHQGPQE--------AKKKPDGSHRILGAGGAAVVHHTLQ 132
AQ+ G P + A+G + P+E A +P + GA G T
Sbjct: 5 AQKAGQGGLPKADAQGASGAREKRPEEPRPLEEDRAGSRPTQKGDLRGAAGG----RTTP 60
Query: 133 PGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEV 185
PG GG G G PG T H RPL R P G SQ E+
Sbjct: 61 PG-----------GGSRGCSLGVSPGPGTRHSAGTRPLVREPCGPTSSQNPEL 102
>gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens]
Length = 531
Score = 37.0 bits (84), Expect = 0.024
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 23/113 (20%)
Query: 81 AQRPAASGCPAQEGTVAAGHGHQGPQE--------AKKKPDGSHRILGAGGAAVVHHTLQ 132
AQ+ G P + A+G + P+E A +P + GA G T
Sbjct: 5 AQKAGQGGLPKADAQGASGAREKRPEEPRPLEEDRAGSRPTQKGDLRGAAGG----RTTP 60
Query: 133 PGWEVLLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGRPESQEAEV 185
PG GG G G PG T H RPL R P G SQ E+
Sbjct: 61 PG-----------GGSRGCSLGVSPGPGTRHSAGTRPLVREPCGPTSSQNPEL 102
>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 451
Score = 36.6 bits (83), Expect = 0.032
Identities = 39/146 (26%), Positives = 48/146 (32%), Gaps = 18/146 (12%)
Query: 141 QPAVDGGGHGEQQGQCPGCPTGHLHP---ARPLNRRPPGRPESQEAEVGTESCQEQDAGI 197
Q AV G QQ Q H P RP+ RRP R +Q G
Sbjct: 142 QGAVQARAAGRQQLQ-------HRQPPARGRPVRRRPAARVLRLRCRGSRARSLQQARG- 193
Query: 198 HGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSH 257
Q+ G P RP AS G QQ+ H +V PGG P H
Sbjct: 194 -QQRVAQGSGPVQRREARPGASRRRGPALQ------QQLGHPRVSVPGGLVQRGAPRPVH 246
Query: 258 PGHHGIARHPHQEDGGIQWERGHAQR 283
H G + G + + G +R
Sbjct: 247 RAHRGPSLQQETHQGRVAPQHGQVER 272
>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 487
Score = 36.6 bits (83), Expect = 0.032
Identities = 39/146 (26%), Positives = 48/146 (32%), Gaps = 18/146 (12%)
Query: 141 QPAVDGGGHGEQQGQCPGCPTGHLHP---ARPLNRRPPGRPESQEAEVGTESCQEQDAGI 197
Q AV G QQ Q H P RP+ RRP R +Q G
Sbjct: 142 QGAVQARAAGRQQLQ-------HRQPPARGRPVRRRPAARVLRLRCRGSRARSLQQARG- 193
Query: 198 HGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGGTHPPAGHLPSH 257
Q+ G P RP AS G QQ+ H +V PGG P H
Sbjct: 194 -QQRVAQGSGPVQRREARPGASRRRGPALQ------QQLGHPRVSVPGGLVQRGAPRPVH 246
Query: 258 PGHHGIARHPHQEDGGIQWERGHAQR 283
H G + G + + G +R
Sbjct: 247 RAHRGPSLQQETHQGRVAPQHGQVER 272
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 36.6 bits (83), Expect = 0.032
Identities = 58/227 (25%), Positives = 76/227 (33%), Gaps = 39/227 (17%)
Query: 75 PHHNGCAQRPA--ASGC-----PAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVV 127
P G + PA AS C A A+G Q A P S GG +
Sbjct: 320 PQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSS-----GGGGQPL 374
Query: 128 HHTLQPGWEV-----LLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGR----- 177
T QP + + QP + +QQG G GH +P +P + P R
Sbjct: 375 ARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTM 434
Query: 178 -PESQEAEVGTESCQ------EQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQR 230
+Q A G Q +Q +GQQ GQ P + + Q
Sbjct: 435 QGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPHPQQQQPPYSQQPPS 491
Query: 231 QTA------QQIRHGQVEQPGGTHPPAGHLPSHPGH-HGIARHPHQE 270
QT QQ Q Q + PP PS P H A +P Q+
Sbjct: 492 QTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQ 538
Score = 30.0 bits (66), Expect = 3.0
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 161 TGHLHPAR-PLNRRPPGRPESQEAEVGTESCQEQD-AGIHGQQDDGGQRPTAHCTIRPVA 218
+G L PA P N+ PP P Q + S + A G Q P + + +P +
Sbjct: 711 SGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQ-YSSPQPGS 769
Query: 219 STGNGHCQDGQRQTA----QQIRHGQVEQPGGTHPPAGHLPSHPGHHGI--ARHPHQEDG 272
+ GQ T QQ G GG + P G P P ++ + A +P
Sbjct: 770 ALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMA 829
Query: 273 GIQWERGHAQRVDGQAG 289
G G ++ GQ G
Sbjct: 830 GGINPMGAGGQMHGQPG 846
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 36.6 bits (83), Expect = 0.032
Identities = 58/227 (25%), Positives = 76/227 (33%), Gaps = 39/227 (17%)
Query: 75 PHHNGCAQRPA--ASGC-----PAQEGTVAAGHGHQGPQEAKKKPDGSHRILGAGGAAVV 127
P G + PA AS C A A+G Q A P S GG +
Sbjct: 320 PQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSS-----GGGGQPL 374
Query: 128 HHTLQPGWEV-----LLVQPAVDGGGHGEQQGQCPGCPTGHLHPARPLNRRPPGR----- 177
T QP + + QP + +QQG G GH +P +P + P R
Sbjct: 375 ARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTM 434
Query: 178 -PESQEAEVGTESCQ------EQDAGIHGQQDDGGQRPTAHCTIRPVASTGNGHCQDGQR 230
+Q A G Q +Q +GQQ GQ P + + Q
Sbjct: 435 QGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPHPQQQQPPYSQQPPS 491
Query: 231 QTA------QQIRHGQVEQPGGTHPPAGHLPSHPGH-HGIARHPHQE 270
QT QQ Q Q + PP PS P H A +P Q+
Sbjct: 492 QTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQ 538
Score = 30.0 bits (66), Expect = 3.0
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 161 TGHLHPAR-PLNRRPPGRPESQEAEVGTESCQEQD-AGIHGQQDDGGQRPTAHCTIRPVA 218
+G L PA P N+ PP P Q + S + A G Q P + + +P +
Sbjct: 711 SGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQ-YSSPQPGS 769
Query: 219 STGNGHCQDGQRQTA----QQIRHGQVEQPGGTHPPAGHLPSHPGHHGI--ARHPHQEDG 272
+ GQ T QQ G GG + P G P P ++ + A +P
Sbjct: 770 ALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMA 829
Query: 273 GIQWERGHAQRVDGQAG 289
G G ++ GQ G
Sbjct: 830 GGINPMGAGGQMHGQPG 846
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.135 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,520,095
Number of Sequences: 37866
Number of extensions: 1051522
Number of successful extensions: 3244
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 2982
Number of HSP's gapped (non-prelim): 471
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.