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Search of human proteins with 239746104
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
(398 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 815 0.0
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 722 0.0
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 397 e-111
gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ... 96 4e-20
gi|163965366 nascent polypeptide-associated complex alpha subuni... 68 1e-11
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 66 5e-11
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 66 5e-11
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 66 5e-11
gi|110832843 TBP-associated factor 4 [Homo sapiens] 65 8e-11
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 62 7e-10
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 62 1e-09
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 62 1e-09
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 62 1e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 62 1e-09
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 60 3e-09
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 60 3e-09
gi|7706469 Kruppel-like factor [Homo sapiens] 59 1e-08
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 58 1e-08
gi|58530845 zyxin [Homo sapiens] 58 2e-08
gi|4508047 zyxin [Homo sapiens] 58 2e-08
gi|18959210 WIRE protein [Homo sapiens] 58 2e-08
gi|18079216 CASK interacting protein 1 [Homo sapiens] 57 3e-08
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 57 3e-08
gi|60460889 Myb protein P42POP [Homo sapiens] 57 3e-08
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 57 3e-08
gi|117938768 GNAS complex locus alex [Homo sapiens] 57 4e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 4e-08
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 55 9e-08
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 55 9e-08
gi|55750053 atrophin-1 [Homo sapiens] 55 1e-07
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 815 bits (2105), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MVPVGRSRSENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRC 60
MVPVGRSRSENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRC
Sbjct: 1 MVPVGRSRSENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRC 60
Query: 61 QRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPAR 120
QRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPAR
Sbjct: 61 QRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPAR 120
Query: 121 AGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPP 180
AGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPP
Sbjct: 121 AGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPP 180
Query: 181 ARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPR 240
ARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPR
Sbjct: 181 ARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPR 240
Query: 241 LRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQ 300
LRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQ
Sbjct: 241 LRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQ 300
Query: 301 AAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPA 360
AAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPA
Sbjct: 301 AAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPA 360
Query: 361 PALQPYALTRFPASLSLPDLVFTSVGSSLVICLVPTPL 398
PALQPYALTRFPASLSLPDLVFTSVGSSLVICLVPTPL
Sbjct: 361 PALQPYALTRFPASLSLPDLVFTSVGSSLVICLVPTPL 398
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 722 bits (1864), Expect = 0.0
Identities = 358/389 (92%), Positives = 361/389 (92%)
Query: 10 ENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEG 69
ENADTARLFGT VYTFEVLGALPPDRSPTPRSRVSPGVT LAVGPGNP RCQRSGVPYEG
Sbjct: 57 ENADTARLFGTTVYTFEVLGALPPDRSPTPRSRVSPGVTGLAVGPGNPKRCQRSGVPYEG 116
Query: 70 PGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGA 129
PGAPGGQQLRKSRARLPRTR GREDA V RNRDPAEPGSLRPTSLGFPARAGQG+VQGA
Sbjct: 117 PGAPGGQQLRKSRARLPRTRPGREDAAVRGRNRDPAEPGSLRPTSLGFPARAGQGQVQGA 176
Query: 130 APGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG 189
APGR+LRGEPKTPPGRSGPSGGVRSGAGHRAA AEHQLGAGFSVRNGPGPPARLPPAPPG
Sbjct: 177 APGRRLRGEPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVRNGPGPPARLPPAPPG 236
Query: 190 PLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLA 249
P LRPARP P P TCEPPSRKLPPPLPLCRSRWVLAPPP VRPRLRVLTPP
Sbjct: 237 PPLRPARPHNPTSRGPGRLLTCEPPSRKLPPPLPLCRSRWVLAPPPTVRPRLRVLTPPFT 296
Query: 250 LRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCS 309
L CALPERGSRTPSTRSAVL RVAGLGTELTLTPSSRRAHGSH LSSERQAAPTRAFCS
Sbjct: 297 LLCALPERGSRTPSTRSAVLVDRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCS 356
Query: 310 ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPYALT 369
ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALA GAPRGRTPSP PGPAPALQPY+LT
Sbjct: 357 ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYSLT 416
Query: 370 RFPASLSLPDLVFTSVGSSLVICLVPTPL 398
RFPASLSLPDLVFTSVGSSLVICLVPTPL
Sbjct: 417 RFPASLSLPDLVFTSVGSSLVICLVPTPL 445
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 397 bits (1021), Expect = e-111
Identities = 227/355 (63%), Positives = 242/355 (68%), Gaps = 20/355 (5%)
Query: 54 PGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPT 113
PG + G P G ++ P +G + G P PG P
Sbjct: 58 PGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQ 117
Query: 114 SLGF---PARAG-QGRVQGAAPGRKLRGEPKTPPGRSGPSGG--VRSGAGHRAAAAEHQL 167
+L P +AG + R+QG + G P+ PG GP+ V G G R
Sbjct: 118 ALASLLGPGKAGCRTRLQGGSSG----ASPRRLPGGRGPAAAFAVEPGTGQRP----RNT 169
Query: 168 GAGFSVRNGPGPPARLPPAPPGPLLRP-ARPPRPYFPRPRTPP---TCEPPSRKLPPPLP 223
+ R+G P LPPA PL P PP P+ P R P TCEPPSRKLPPPLP
Sbjct: 170 SLAQASRSGTVPG--LPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLP 227
Query: 224 LCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLT 283
CRSRWVLAPPP VRPRLRVLTPPLALR ALPERGSRTPSTRSAVLSGRVAGLGTELTLT
Sbjct: 228 PCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLT 287
Query: 284 PSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAAL 343
PSSRRAHGSH LSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAAL
Sbjct: 288 PSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAAL 347
Query: 344 ARGAPRGRTPSPRPGPAPALQPYALTRFPASLSLPDLVFTSVGSSLVICLVPTPL 398
A GAPRGRTPSP PGPAPALQPY LTRFPASLSLPDLVFTSVGSSLVICLVPTPL
Sbjct: 348 ALGAPRGRTPSPGPGPAPALQPYTLTRFPASLSLPDLVFTSVGSSLVICLVPTPL 402
>gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo
sapiens]
Length = 316
Score = 96.3 bits (238), Expect = 4e-20
Identities = 72/196 (36%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 54 PGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPT 113
PG + G P G ++ P +G + G P PG P
Sbjct: 58 PGTQRGVREVGSPTRDQEIRAGSSCGRAARGFPEPGRGGKTQEWGGGTGTPQSPGPCAPQ 117
Query: 114 SLGF---PARAG-QGRVQGAAPGRKLRGEPKTPPGRSGPSGG--VRSGAGHRAAAAEHQL 167
+L P +AG + R+QG + G P+ PG GP+ V G G R
Sbjct: 118 ALASLLGPGKAGCRARLQGGSSG----ASPRRLPGGRGPAAAFAVEPGTGQRP----RNT 169
Query: 168 GAGFSVRNGPGPPARLPPAPPGPLLRPA-RPPRPYFPRPRTPP---TCEPPSRKLPPPLP 223
+ R+G P LPPA PL P PP P+ P R P T EPPSRKLPPPLP
Sbjct: 170 SLAQASRSGTVPG--LPPASLQPLRVPYFAPPGPHDPTSRGPGRLLTREPPSRKLPPPLP 227
Query: 224 LCRSRWVLAPPPPVRP 239
LCRSRWVLAPPPP P
Sbjct: 228 LCRSRWVLAPPPPPAP 243
Score = 39.3 bits (90), Expect = 0.006
Identities = 54/196 (27%), Positives = 67/196 (34%), Gaps = 30/196 (15%)
Query: 29 GALPPDRSPTPRSRVSPGVTSLAVGPGNP---TRCQRSGVPYEGPGAPGGQQLRKSRARL 85
G +SP P +P + +GPG R Q PGG+ + A
Sbjct: 103 GGTGTPQSPGP---CAPQALASLLGPGKAGCRARLQGGSSGASPRRLPGGRGPAAAFAVE 159
Query: 86 PRTRQGREDAGVGRRNRDPAEPG----SLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKT 141
P T Q + + + +R PG SL+P + + A G PGR L EP
Sbjct: 160 PGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRVPYFAPPGPHDPTSRGPGRLLTREP-- 217
Query: 142 PPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPY 201
P R P L V P PPA PP P P RPPR
Sbjct: 218 -PSRKLPP--------------PLPLCRSRWVLAPPPPPA--PPGPNAAAHPPLRPPRAR 260
Query: 202 FPRPRTPPTCE-PPSR 216
P P C PSR
Sbjct: 261 LQDPVDPERCPGGPSR 276
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 68.2 bits (165), Expect = 1e-11
Identities = 93/357 (26%), Positives = 117/357 (32%), Gaps = 42/357 (11%)
Query: 33 PDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGR 92
P +PTP + P GP P+ P P +P G S P
Sbjct: 959 PKWAPTPPAATPPSPKG---GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVT 1015
Query: 93 EDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGV 152
+ G P G+ P + P+ G G P + GP+
Sbjct: 1016 PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPS 1075
Query: 153 RSGAGHRAAAAEHQLGAGF---SVRNGPGPPARLPPAPPGPLLRP----------ARPPR 199
GA AA G S + P PPA PP+P G L P A PP
Sbjct: 1076 LKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPS 1135
Query: 200 PYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPL---ALRCALPE 256
P PP P + PP P + PPP P TPP L P+
Sbjct: 1136 PKGGLATPPPKGAPTTPAATPPSP---KGGLATPPPKGAPTTPAATPPSPKGGLATPSPK 1192
Query: 257 RGSRTPSTRSAVLSGRVA-----GLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSAD 311
TP+ G +A G T TP S + G A S + A T A
Sbjct: 1193 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK--GGLATPSPKGAPTTPA----- 1245
Query: 312 PLPRPPSFVPSLPSPQ-AQGQAVRQPRLLRAALA----RGAPRGRT---PSPRPGPA 360
P P P+ P P+ A P L+ LA +GAP PSP+ GPA
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPA 1302
Score = 64.7 bits (156), Expect = 1e-10
Identities = 71/232 (30%), Positives = 91/232 (39%), Gaps = 60/232 (25%)
Query: 139 PKTPPGRSGPSGGVRSGAGHRAAAAEHQLG--AGFSVRNGPGPPARLPPAPPGPLLRPAR 196
P TP + P+ + S + +A A G A S + P PPA PP+P G PA
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKG---GPAT 956
Query: 197 PPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPE 256
P + P TPP PPS K P P + AP PP TPP P+
Sbjct: 957 PSPKWAP---TPPAATPPSPKGGPATPSPKG----APTPP------AATPP------SPK 997
Query: 257 RGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRP 316
G TPS + G T +TP S + GS A A P P+
Sbjct: 998 GGPATPSPK---------GAPTPPAVTPPSPK--GSPA---------------ATPFPKG 1031
Query: 317 PSFVPSLPSPQAQGQAVRQPRLLRAALARGA---PRGRTPSPRPGPA-PALQ 364
S P+ P +G P L +GA P PSP+ GPA P+L+
Sbjct: 1032 ASTPPAATPPSPKGSPAATP------LPKGAPTTPAATLPSPKGGPATPSLK 1077
Score = 58.5 bits (140), Expect = 1e-08
Identities = 91/361 (25%), Positives = 118/361 (32%), Gaps = 65/361 (18%)
Query: 28 LGALPPDRSPTPRSRVSPGVTS-LAVGP--GNPTRCQRSGVPYEGPGAPGGQQLRKSRAR 84
L PP +PT + P LA P G PT P P +P G S
Sbjct: 1140 LATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT------TPAATPPSPKGGLATPSPKG 1193
Query: 85 LPRTRQGREDAGVG-----RRNRDPAEPGSLRPT---SLGFPARAGQGRVQGAAPGRKLR 136
P T + G P P + P+ L P+ G A P +
Sbjct: 1194 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP-K 1252
Query: 137 GEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPAR 196
G P TPP + P+ AA L G + G P PP P PA
Sbjct: 1253 GGPATPPPKGAPTP---------PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303
Query: 197 PPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPE 256
P P TPP PPS K P PPP P +TPP P
Sbjct: 1304 SPPKGAP---TPPAATPPSPKGSPG----------TPPPKGAPTPPAVTPPSPK--GTPT 1348
Query: 257 RGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRP 316
+ TPS++ TPSS+ A + + P P
Sbjct: 1349 LPATTPSSKGG-------------PTTPSSKEGPTPPAATPSHKGGPAMT-------PPS 1388
Query: 317 PSFVPSLPSPQAQGQAVRQ-PRLLRAALARGAPR--GRTPSPRPGPAPALQPYALTRFPA 373
P P++PSP+ + P + A A R TPS PA+ P +L + PA
Sbjct: 1389 PKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPA 1448
Query: 374 S 374
+
Sbjct: 1449 T 1449
Score = 57.8 bits (138), Expect = 2e-08
Identities = 96/390 (24%), Positives = 140/390 (35%), Gaps = 65/390 (16%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
PP +PTP + P SL G P P +P G P
Sbjct: 1259 PPKGAPTPPAATPP---SLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAA 1315
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGG 151
+ G P + G+ P ++ P+ G + P K G P TP + GP+
Sbjct: 1316 TPPSPKGSPGTPPPK-GAPTPPAVTPPSPKGTPTLPATTPSSK--GGPTTPSSKEGPTPP 1372
Query: 152 VRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLP--PAPPGPLLRPARPPRPYFPRPRTPP 209
AA H+ G + P P R P P+P G PA P P TP
Sbjct: 1373 --------AATPSHKGGPAMT----PPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPV 1420
Query: 210 TCE----PPSRKLPPP----LPLCRSRWVLAPP-----PPVR--PRLRVLTPPLALRCAL 254
T E P L PP + L ++ AP P + P L +TPP
Sbjct: 1421 TREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPA 1480
Query: 255 PERGSRTPSTRSAVLSGRVAGLGT----------ELTLTPSSRR---AHGSHALSSERQA 301
P++ + + S + A + G T E+ TPSSRR A + LS + A
Sbjct: 1481 PKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPA 1540
Query: 302 --APTRAFCSADPLPRPPSFVPSLPSPQ-----AQGQAVRQPRLLRAALARGAPRGR--- 351
AP A P P++P+P+ + P + + +GAP +
Sbjct: 1541 TLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELL 1600
Query: 352 ------TPSPRPGPA-PALQPYALTRFPAS 374
+PSP+ P PA+ P + + PA+
Sbjct: 1601 IPPAVTSPSPKEAPTPPAVTPPSPEKGPAT 1630
Score = 34.3 bits (77), Expect = 0.20
Identities = 55/276 (19%), Positives = 94/276 (34%), Gaps = 31/276 (11%)
Query: 56 NPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSL 115
+P + P E P P ++ A P T +G P+ L P ++
Sbjct: 1557 SPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGA-----------PSPKELLIPPAV 1605
Query: 116 GFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHR-----AAAAEHQLGAG 170
P+ P +G P TP + P+ + + + A+ ++GA
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEKG-PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGAT 1664
Query: 171 FSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWV 230
+ P + P A L+ PA P + P P+RK P +
Sbjct: 1665 VPQASKGLPAKKGPTALKEVLVAPA---------PESTPIITAPTRKGPQTKKSSATSPP 1715
Query: 231 LAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAH 290
+ P P + + PL+ P + S+++A G+ A + L P +A
Sbjct: 1716 ICPDPSAKNGSK---GPLSTVAPAPLLPVQKDSSKTA--KGKDASHSPKGPLAPPESKAS 1770
Query: 291 GSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSP 326
++ + P S P PP +P PSP
Sbjct: 1771 TPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSP 1806
Score = 30.0 bits (66), Expect = 3.8
Identities = 54/245 (22%), Positives = 76/245 (31%), Gaps = 61/245 (24%)
Query: 139 PKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVR-NGPGPPARL----PPAPPGPLLR 193
PK P + S G A+ G SV PP + P P G L
Sbjct: 767 PKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSS 826
Query: 194 PARPPRPYFPRPRT---------PPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVL 244
P P F + P T P+ P P + L+P P
Sbjct: 827 PVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETP 886
Query: 245 TPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPT 304
TP + + P+ G TP+ + A L++T SS + + +A P
Sbjct: 887 TPSV-VNLPFPKEGPATPAPKQA----------PALSMTSSSPK---------KARATPA 926
Query: 305 RAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQ 364
P +P+ PSP+ A P PSP+ GPA
Sbjct: 927 ------------PKGIPASPSPKG---------------APTPPAATPPSPKGGPATPSP 959
Query: 365 PYALT 369
+A T
Sbjct: 960 KWAPT 964
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 66.2 bits (160), Expect = 5e-11
Identities = 103/358 (28%), Positives = 125/358 (34%), Gaps = 68/358 (18%)
Query: 31 LPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQ 90
+P RS R S G + PG + S P+ P PG R P
Sbjct: 108 MPKLRSTANRDNDSGGSRPPLLPPGGRST---SAKPFSPPSGPG---------RFPVPSP 155
Query: 91 G-REDAGVGRRNRDPA---EPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRS 146
G R +RNR P + GS +P S+ P + +Q + R G P P G
Sbjct: 156 GHRSGPPEPQRNRMPPPRPDVGS-KPDSIPPPVPSTPRPIQSSPHNR---GSPPVPGGPR 211
Query: 147 GPSGGVRSGA--GHRAAAAEHQLGAGFSVRNGP----GPPARLPPAPPGPLL----RPAR 196
PS G G+R A LG G S+R P P + PP PP P +P
Sbjct: 212 QPSPGPTPPPFPGNRGTA----LGGG-SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266
Query: 197 PP-----RPYFPRPRTPPTCEPPSRKLPP----PLPLCRSRWVLAPPPPVRPRLRVLTPP 247
PP RP R PP PP PP P P S+ PPPP RP PP
Sbjct: 267 PPPPVGNRPSIHREAVPPP--PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPG----PPP 320
Query: 248 LALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAF 307
L + + R P R L + PS R+ SER P R
Sbjct: 321 LPPSSSGNDETPRLPQ--------RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD- 371
Query: 308 CSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQP 365
PP LP P + R L A + R SPR GP P L P
Sbjct: 372 --------PPGRSGPLPPPPPVSRNGSTSRALPAT-PQLPSRSGVDSPRSGPRPPLPP 420
Score = 51.6 bits (122), Expect = 1e-06
Identities = 74/260 (28%), Positives = 93/260 (35%), Gaps = 47/260 (18%)
Query: 122 GQGRVQGAAP----GRKLRGEPK--TPPGRSGPSGGVRSGA---GHRAAAAEHQLGAGFS 172
G G G P G G PK + R SGG R G R+ +A+ FS
Sbjct: 88 GGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKP-----FS 142
Query: 173 VRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLA 232
+GPG R P PG P P R P PR +P S +PPP+P +
Sbjct: 143 PPSGPG---RFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDS--IPPPVP--------S 189
Query: 233 PPPPVR--PRLRVLTPPLALRCALPERGSRT---PSTRSAVLSGRVAGLGTELTLTPSSR 287
P P++ P R +PP+ P G P R L G + +P S
Sbjct: 190 TPRPIQSSPHNRG-SPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSN 248
Query: 288 RAHGSHALSSERQAAPTRAFCSADPLPRPP-SFVPSL-----PSPQAQGQAVRQPRLLRA 341
R P+RA P P PP PS+ P P Q P R
Sbjct: 249 R--------PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRP 300
Query: 342 ALARGAPRGRTPSPRPGPAP 361
+ + AP P RPGP P
Sbjct: 301 SASSQAPPPPPPPSRPGPPP 320
Score = 47.8 bits (112), Expect = 2e-05
Identities = 86/332 (25%), Positives = 111/332 (33%), Gaps = 96/332 (28%)
Query: 64 GVPYEGPGAPG-GQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAG 122
G + G G PG G + +L T D+G R P PG ++ F +G
Sbjct: 89 GGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLP--PGGRSTSAKPFSPPSG 146
Query: 123 QGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRA--------------AAAEHQLG 168
GR +PG + G P+ R P R G + ++ H G
Sbjct: 147 PGRFPVPSPGHR-SGPPEPQRNRMPPP---RPDVGSKPDSIPPPVPSTPRPIQSSPHNRG 202
Query: 169 AGFSVRNGPGPPARLPPAPPGPLLR------------PARPPRPYFPRPRTPPTCEPPSR 216
+ V GP P+ P PP P R P P+ RP PPT PSR
Sbjct: 203 SP-PVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT---PSR 258
Query: 217 KL---PPPLPLCRSRWVLAPPPPV--RPRL-RVLTPPLALRCALPERGSRTPSTRSAVLS 270
L PPP PPPPV RP + R PP P + ++ P
Sbjct: 259 ALDDKPPP-----------PPPPVGNRPSIHREAVPPP------PPQNNKPP-------- 293
Query: 271 GRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQG 330
PS+ R S A P P PPS P P +
Sbjct: 294 ------------VPSTPRPSASS---------------QAPPPPPPPSRPGPPPLPPSSS 326
Query: 331 QAVRQPRLLRAALARGAPRGRTPSP-RPGPAP 361
PRL + L+ + PSP R GP P
Sbjct: 327 GNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358
Score = 44.7 bits (104), Expect = 2e-04
Identities = 72/266 (27%), Positives = 86/266 (32%), Gaps = 62/266 (23%)
Query: 30 ALPPDRSPTPRS-RVSPGVTSLAVGPGNPTRCQRSGVPYEGPG----APGGQQLRKS--- 81
++PP TPR + SP PG P + P PG A GG +R+S
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLS 241
Query: 82 -------RARLPRTRQGRED-------AGVGRR---NRDPAEPGSLRPTSLGFPARAGQG 124
R LP T D VG R +R+ P + P+
Sbjct: 242 SSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS 301
Query: 125 RVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGP-PARL 183
A P P PP R GP S +G+ Q S P P P R
Sbjct: 302 ASSQAPP-------PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 184 PPAPPGPLLRPARPPRPYFPRPRTPPTCEPP--------SRKLP---------------- 219
P PP P RP P R P R+ P PP SR LP
Sbjct: 355 GPLPPPPSERPPPPVRD--PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 220 ---PPLPLCRSRWVLAPPPPVRPRLR 242
PPLP R PPPP +R
Sbjct: 413 GPRPPLPPDRPSAGAPPPPPPSTSIR 438
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 66.2 bits (160), Expect = 5e-11
Identities = 103/358 (28%), Positives = 125/358 (34%), Gaps = 68/358 (18%)
Query: 31 LPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQ 90
+P RS R S G + PG + S P+ P PG R P
Sbjct: 108 MPKLRSTANRDNDSGGSRPPLLPPGGRST---SAKPFSPPSGPG---------RFPVPSP 155
Query: 91 G-REDAGVGRRNRDPA---EPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRS 146
G R +RNR P + GS +P S+ P + +Q + R G P P G
Sbjct: 156 GHRSGPPEPQRNRMPPPRPDVGS-KPDSIPPPVPSTPRPIQSSPHNR---GSPPVPGGPR 211
Query: 147 GPSGGVRSGA--GHRAAAAEHQLGAGFSVRNGP----GPPARLPPAPPGPLL----RPAR 196
PS G G+R A LG G S+R P P + PP PP P +P
Sbjct: 212 QPSPGPTPPPFPGNRGTA----LGGG-SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266
Query: 197 PP-----RPYFPRPRTPPTCEPPSRKLPP----PLPLCRSRWVLAPPPPVRPRLRVLTPP 247
PP RP R PP PP PP P P S+ PPPP RP PP
Sbjct: 267 PPPPVGNRPSIHREAVPPP--PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPG----PPP 320
Query: 248 LALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAF 307
L + + R P R L + PS R+ SER P R
Sbjct: 321 LPPSSSGNDETPRLPQ--------RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD- 371
Query: 308 CSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQP 365
PP LP P + R L A + R SPR GP P L P
Sbjct: 372 --------PPGRSGPLPPPPPVSRNGSTSRALPAT-PQLPSRSGVDSPRSGPRPPLPP 420
Score = 51.6 bits (122), Expect = 1e-06
Identities = 74/260 (28%), Positives = 93/260 (35%), Gaps = 47/260 (18%)
Query: 122 GQGRVQGAAP----GRKLRGEPK--TPPGRSGPSGGVRSGA---GHRAAAAEHQLGAGFS 172
G G G P G G PK + R SGG R G R+ +A+ FS
Sbjct: 88 GGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKP-----FS 142
Query: 173 VRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLA 232
+GPG R P PG P P R P PR +P S +PPP+P +
Sbjct: 143 PPSGPG---RFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDS--IPPPVP--------S 189
Query: 233 PPPPVR--PRLRVLTPPLALRCALPERGSRT---PSTRSAVLSGRVAGLGTELTLTPSSR 287
P P++ P R +PP+ P G P R L G + +P S
Sbjct: 190 TPRPIQSSPHNRG-SPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSN 248
Query: 288 RAHGSHALSSERQAAPTRAFCSADPLPRPP-SFVPSL-----PSPQAQGQAVRQPRLLRA 341
R P+RA P P PP PS+ P P Q P R
Sbjct: 249 R--------PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRP 300
Query: 342 ALARGAPRGRTPSPRPGPAP 361
+ + AP P RPGP P
Sbjct: 301 SASSQAPPPPPPPSRPGPPP 320
Score = 47.8 bits (112), Expect = 2e-05
Identities = 86/332 (25%), Positives = 111/332 (33%), Gaps = 96/332 (28%)
Query: 64 GVPYEGPGAPG-GQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAG 122
G + G G PG G + +L T D+G R P PG ++ F +G
Sbjct: 89 GGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLP--PGGRSTSAKPFSPPSG 146
Query: 123 QGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRA--------------AAAEHQLG 168
GR +PG + G P+ R P R G + ++ H G
Sbjct: 147 PGRFPVPSPGHR-SGPPEPQRNRMPPP---RPDVGSKPDSIPPPVPSTPRPIQSSPHNRG 202
Query: 169 AGFSVRNGPGPPARLPPAPPGPLLR------------PARPPRPYFPRPRTPPTCEPPSR 216
+ V GP P+ P PP P R P P+ RP PPT PSR
Sbjct: 203 SP-PVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT---PSR 258
Query: 217 KL---PPPLPLCRSRWVLAPPPPV--RPRL-RVLTPPLALRCALPERGSRTPSTRSAVLS 270
L PPP PPPPV RP + R PP P + ++ P
Sbjct: 259 ALDDKPPP-----------PPPPVGNRPSIHREAVPPP------PPQNNKPP-------- 293
Query: 271 GRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQG 330
PS+ R S A P P PPS P P +
Sbjct: 294 ------------VPSTPRPSASS---------------QAPPPPPPPSRPGPPPLPPSSS 326
Query: 331 QAVRQPRLLRAALARGAPRGRTPSP-RPGPAP 361
PRL + L+ + PSP R GP P
Sbjct: 327 GNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358
Score = 44.7 bits (104), Expect = 2e-04
Identities = 72/266 (27%), Positives = 86/266 (32%), Gaps = 62/266 (23%)
Query: 30 ALPPDRSPTPRS-RVSPGVTSLAVGPGNPTRCQRSGVPYEGPG----APGGQQLRKS--- 81
++PP TPR + SP PG P + P PG A GG +R+S
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLS 241
Query: 82 -------RARLPRTRQGRED-------AGVGRR---NRDPAEPGSLRPTSLGFPARAGQG 124
R LP T D VG R +R+ P + P+
Sbjct: 242 SSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS 301
Query: 125 RVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGP-PARL 183
A P P PP R GP S +G+ Q S P P P R
Sbjct: 302 ASSQAPP-------PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 184 PPAPPGPLLRPARPPRPYFPRPRTPPTCEPP--------SRKLP---------------- 219
P PP P RP P R P R+ P PP SR LP
Sbjct: 355 GPLPPPPSERPPPPVRD--PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 220 ---PPLPLCRSRWVLAPPPPVRPRLR 242
PPLP R PPPP +R
Sbjct: 413 GPRPPLPPDRPSAGAPPPPPPSTSIR 438
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 66.2 bits (160), Expect = 5e-11
Identities = 116/473 (24%), Positives = 152/473 (32%), Gaps = 101/473 (21%)
Query: 5 GRSRSENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSG 64
GR A R AV E +P P P V S G
Sbjct: 221 GRPPGRPAGPCRRKQQAVVVAEAAVTIPKPEPPPPVVPVKHQTGSWKCKEG--------- 271
Query: 65 VPYEGPGAP--GGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAG 122
P GPG P GGQ R R R R G + +R A+ + SLG + G
Sbjct: 272 -PGPGPGTPRRGGQSSRGGRGGRGRGRGGGLPFVIKFVSR--AKKVKMGQLSLGLESGQG 328
Query: 123 QGRVQGA---APGRKLR----GEP--KTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSV 173
QG+ + + P R++ G P K + + + E + +
Sbjct: 329 QGQHEESWQDVPQRRVGSGQGGSPCWKKQEQKLDDEEEEKKEEEEKDKEGEEKEERAVAE 388
Query: 174 RNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRT---PPTCEPPSRKL-PPPLPLCRSRW 229
P PP PL PA P P P P T PP C PP + PPPLP
Sbjct: 389 EMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLP------ 442
Query: 230 VLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTL--TPSSR 287
+PPPP + +PP + + R P T S A G E T TP+
Sbjct: 443 --SPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPS 500
Query: 288 RAHGSH--------------------------ALSSERQAAPTRAFCSADP--------- 312
A G + S R R F DP
Sbjct: 501 TATGGPPEDSPTVAPKSTTFLKNIRQFIMPVVSARSSRVIKTPRRFMDEDPPKPPKVEVS 560
Query: 313 ------------LPRPPSFVPS-----------LPSPQAQGQAVRQPRLLRAALARGAPR 349
+P+ P+ VPS +P P+ + +R+P +L R P
Sbjct: 561 PVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPP 620
Query: 350 GR-TPSPRPGPAPALQPYALTRFPASLSLPDLVFTSVGSSLVI---CLVPTPL 398
P P P P+P P +R P L P FT + L I L P PL
Sbjct: 621 PPPAPPPPPAPSPPPAPATSSRRPLLLRAPQ--FTPSEAHLKIYESVLTPPPL 671
Score = 44.3 bits (103), Expect = 2e-04
Identities = 66/248 (26%), Positives = 87/248 (35%), Gaps = 61/248 (24%)
Query: 139 PKTPPGRSGPSGGVRSGAGHRAAAAEHQL------GAGFSVRNGPGPPARLP-------- 184
P P S P RS +G R + G F PG P+ L
Sbjct: 1844 PLRPDSGSAPPPAPRSFSGARIKVPNYSPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVGD 1903
Query: 185 ---PAPPGPLLRPARPPRPYFPRP-----RTPPTCEPPSRKLPPP----LPLCRSRWVLA 232
PAPP R +R P P PRP +PP P ++PPP L + LA
Sbjct: 1904 PDFPAPP----RRSRRPSPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELA 1959
Query: 233 PPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAV-LSGRVAGLGT-----ELTLTPSS 286
PP P +PP S SA L + LGT E+ +
Sbjct: 1960 PPGPAP------SPPPPEDLGPDFEDMEVVSGLSAADLDFAASLLGTEPFQEEIVAAGAM 2013
Query: 287 RRAHGSHALSSERQAAPTRAF-------CSADPLPRPPSFVPSLP----------SPQAQ 329
+HG SSE +++PT + SA L PS P P ++
Sbjct: 2014 GSSHGGPGDSSEEESSPTSRYIHFPVTVVSAPGL--APSATPGAPRIEQLDGVDDGTDSE 2071
Query: 330 GQAVRQPR 337
+AV+QPR
Sbjct: 2072 AEAVQQPR 2079
Score = 41.2 bits (95), Expect = 0.002
Identities = 65/216 (30%), Positives = 75/216 (34%), Gaps = 75/216 (34%)
Query: 184 PPAPP----GPLLRP---ARPPRPYFPRP-------RTPPTCEPP--------------- 214
PP PP P+LRP PP P P P TPP+ P
Sbjct: 551 PPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFR 610
Query: 215 ----SRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLS 270
+R+LPPP P APPPP P +PP A P SR P A
Sbjct: 611 WTSLTRELPPPPP--------APPPPPAP-----SPPPA-----PATSSRRPLLLRAP-- 650
Query: 271 GRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQG 330
TPS AH S P A + +P P P P+ P P+A G
Sbjct: 651 ----------QFTPS--EAH-LKIYESVLTPPPLGAPEAPEPEPPPADDSPAEPEPRAVG 697
Query: 331 QAVRQPRLLRAALARGAPRGRTP---SPRPGPAPAL 363
R +L R AP TP P APAL
Sbjct: 698 ------RTNHLSLPRFAPVVTTPVKAEVSPHGAPAL 727
Score = 38.9 bits (89), Expect = 0.008
Identities = 63/206 (30%), Positives = 73/206 (35%), Gaps = 46/206 (22%)
Query: 177 PGPP-ARLPPAPPGPLLRPARP--PRPYF-------PRPRTPPTCEPPSRKLPPPLPLCR 226
P PP A PP+ P PL R P F P PP PP PPP P
Sbjct: 581 PSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAPATS 640
Query: 227 SRWVL---APP-PPVRPRLR----VLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGT 278
SR L AP P L+ VLTPP PE A R G
Sbjct: 641 SRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPEPEPPPADDSPAEPEPRAVGRTN 700
Query: 279 ELTL--------TPSSRRA--HGSHALSS----------ERQAAPTRAFCSADPLPRPPS 318
L+L TP HG+ ALS+ QA T+ A P P+P
Sbjct: 701 HLSLPRFAPVVTTPVKAEVSPHGAPALSNGPQTQAQLLQPLQALQTQLLPQALPPPQPQL 760
Query: 319 FVPSLPSPQAQGQAVRQPRLLRAALA 344
P PSPQ + P L +A +A
Sbjct: 761 QPP--PSPQ------QMPPLEKARIA 778
Score = 36.6 bits (83), Expect = 0.041
Identities = 59/222 (26%), Positives = 73/222 (32%), Gaps = 50/222 (22%)
Query: 151 GVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPL----LRPARPPRPYFPRPR 206
G R H AA E+Q ++ + P P + P PL L P P R + P
Sbjct: 1787 GPREEPAHLEAAEENQ-----TIVHSPAPSSEPPGGEDPPLDTDVLVPGAPER-HSPIQN 1840
Query: 207 TPPTCEPPSRKLPPPLPLCRSRWVLAPP---PPVRPRLRVLTPPLALRCALPERGSRTPS 263
P P S PPP P S + P P RP V P LP GS
Sbjct: 1841 LDPPLRPDSGSAPPPAPRSFSGARIKVPNYSPSRRPLGGVSFGP------LPSPGS---- 1890
Query: 264 TRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPP----SF 319
PSS H + A P R+ + PRPP +
Sbjct: 1891 --------------------PSSLTHHIPTVGDPDFPAPPRRSRRPSPLAPRPPPSRWAS 1930
Query: 320 VPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAP 361
P SPQ + V P + AL + P P P P P
Sbjct: 1931 PPLKTSPQLR---VPPPTSVVTALTPTSGELAPPGPAPSPPP 1969
Score = 34.3 bits (77), Expect = 0.20
Identities = 76/289 (26%), Positives = 90/289 (31%), Gaps = 58/289 (20%)
Query: 3 PVGRSRSENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQR 62
P S E++ T+R V G P PR GV + R
Sbjct: 2020 PGDSSEEESSPTSRYIHFPVTVVSAPGLAPSATPGAPRIEQLDGVDDGTDSEAEAVQQPR 2079
Query: 63 S-GVPYEGPGAPGGQQLRKS--RARLP------------RTRQGREDAGVGRRNRD--PA 105
G P GPG L + RAR P + G D G G R PA
Sbjct: 2080 GQGTPPSGPGVVRAGVLGAAGDRARPPEDLPSEIVDFVLKNLGGPGDGGAGPREESLPPA 2139
Query: 106 EPGSLRPTSLGFPARAGQGRVQGAA-PGRKLRGEPKTPPGRS---GPSGGVRSGAGHRAA 161
P L ++ QG A P R P P R GP+ A +
Sbjct: 2140 PP-------LANGSQPSQGLTASPADPTRTFAWLPGAPGVRVLSLGPAPEPPKPATSKII 2192
Query: 162 AAEHQLGAGFSVRNGPG----PPARLPPAPP--------------GPLLRP---ARPPRP 200
++LG F G G PP + PP PP GPLL RP
Sbjct: 2193 LV-NKLGQVFVKMAGEGEPVPPPVKQPPLPPTISPTAPTSWTLPPGPLLGVLPVVGVVRP 2251
Query: 201 YFPRPRTPPTCEPPSRKLPPPLPLCRSRWVL--------APPPPVRPRL 241
P P P T S PP R + V APPP PRL
Sbjct: 2252 APPPPPPPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRL 2300
Score = 31.6 bits (70), Expect = 1.3
Identities = 67/254 (26%), Positives = 82/254 (32%), Gaps = 74/254 (29%)
Query: 53 GPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSL-- 110
GPG+ R + G P G G GG+ R + A R R G +P E +L
Sbjct: 12 GPGS-ARGRFPGRP-RGAGGGGGRGGRGNGAERVRVALRRGGGATGPGGAEPGEDTALLR 69
Query: 111 ---------RPTSLGFPARA----GQGRVQGAAPGRKLRGEPKTPPGRSGPS-------- 149
R L R G+GR +G P R E ++ G S
Sbjct: 70 LLGLRRGLRRLRRLWAGPRVQRGRGRGRGRGWGPSRGCVPEEESSDGESDEEEFQGFHSD 129
Query: 150 -----GGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPA--------- 195
+RS + A G G + P PP RL P P PA
Sbjct: 130 EDVAPSSLRSALRSQRGRAPR--GRGRKHKTTPLPPPRLADVAPTPPKTPARKRGEEGTE 187
Query: 196 -----------RPPRPYFPRPRTPPTCEPP----SRKLPPPLPL--CRSRW---VLA--- 232
R P PR R CEP SR PP P CR + V+A
Sbjct: 188 RMVQALTELLRRAQAPQAPRSR---ACEPSTPRRSRGRPPGRPAGPCRRKQQAVVVAEAA 244
Query: 233 -------PPPPVRP 239
PPPPV P
Sbjct: 245 VTIPKPEPPPPVVP 258
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 65.5 bits (158), Expect = 8e-11
Identities = 76/256 (29%), Positives = 96/256 (37%), Gaps = 33/256 (12%)
Query: 139 PKTPPGRSGPSGGVRSG--AGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPA- 195
P+TP R+ +G + + +G A AA GAG G P P PP RP
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAA----GAG-PAAPAEGAPGAAPEPPPAGRARPGG 99
Query: 196 ----RPPRPYFPRPRTPPTCEPPSRKLPPP--------LPLCRSRWVLAPPPPVRPRLRV 243
RP P RP P PP+ KL PP P+ + V A P P
Sbjct: 100 GGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK 159
Query: 244 LTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAP 303
P AL P G+ AG G TL S+ + HA AAP
Sbjct: 160 PAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHA------AAP 213
Query: 304 TRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGP-APA 362
+ + P P LP P A G ++ P + AA A AP +P P P APA
Sbjct: 214 AVSLVNNGPAALLP-----LPKPAAPGTVIQTPPFVGAA-APPAPAAPSPPAAPAPAAPA 267
Query: 363 LQPYALTRFPASLSLP 378
P PA+L+ P
Sbjct: 268 AAPPPPPPAPATLARP 283
Score = 48.9 bits (115), Expect = 8e-06
Identities = 82/333 (24%), Positives = 99/333 (29%), Gaps = 76/333 (22%)
Query: 98 GRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGR--------------------KLRG 137
G PA P P + P AG+ R G P R KLR
Sbjct: 69 GAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRP 128
Query: 138 EPKTPPGRSGP---SGGVRSGAGHRAAAAEHQLG-AGFSVRNGPGPPARLPPAPPGPLLR 193
P+ G P + V +G A G A + R GPGP P PGP
Sbjct: 129 PPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG---PGPGPGPGPG 185
Query: 194 PARPPRP----------------YFPRPRTPPTCEPPSRKLPPPLPLCRSRWV------- 230
P +P P + P P+ LP P P +
Sbjct: 186 PGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVG 245
Query: 231 -LAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLS---GRVAGLGTELTLTPSS 286
APP P P +PP A A P P A L+ G AG T P
Sbjct: 246 AAAPPAPAAP-----SPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP 300
Query: 287 RRAHGSHALSSERQAAPTR---AFCSADPLP-------------RPPSFVPSLPSPQAQG 330
A + + AP A S P P P V P AQ
Sbjct: 301 AAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQT 360
Query: 331 QAVRQPRLLRAALARG-APRGRTPSPRPGPAPA 362
A P A++ G +G PSP P PA
Sbjct: 361 LAASGPASTAASMVIGPTMQGALPSPAAVPPPA 393
Score = 40.0 bits (92), Expect = 0.004
Identities = 94/389 (24%), Positives = 111/389 (28%), Gaps = 87/389 (22%)
Query: 29 GALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPY-EGPGAPGGQQLRKSRARLPR 87
GA P P P R PG G P QR G P P P G ++ R P
Sbjct: 84 GAAP---EPPPAGRARPG-------GGGP---QRPGPPSPRRPLVPAGPAPPAAKLRPPP 130
Query: 88 TRQGREDAGVGRR-----NRDPAEPGSLRPTS-LGFPARAGQGRVQGAAPGRKLRGEPKT 141
A V +PA G +P ARAG G G PG P
Sbjct: 131 EGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG------PGP 184
Query: 142 PPGRSGPSGGVRSGAGHRAAAAEHQLGAGFS--VRNGPGP-------------------- 179
PG+ G ++ G A H A V NGP
Sbjct: 185 GPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFV 244
Query: 180 ---------------------PARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKL 218
PA PP PP ARPP P PPT P +
Sbjct: 245 GAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPP----GHPAGPPTAAP---AV 297
Query: 219 PPPLPLCRSRWVLAPPPPV----RPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVA 274
PPP A P P P P A P G + S + V + A
Sbjct: 298 PPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPA 357
Query: 275 GLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVR 334
T P+S A S + Q A P P P+ +P + R
Sbjct: 358 A-QTLAASGPASTAA--SMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSR 414
Query: 335 QPRL----LRAALARGAPRGRTPSPRPGP 359
P +RA L R P P P
Sbjct: 415 TPTATTSGIRATLTPTVLAPRLPQPPQNP 443
Score = 38.5 bits (88), Expect = 0.011
Identities = 85/370 (22%), Positives = 120/370 (32%), Gaps = 32/370 (8%)
Query: 19 GTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQL 78
GT + T +GA P P +P + A P P + PG P G
Sbjct: 235 GTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLA--RPPGHPAGPPT 292
Query: 79 RKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGA-APGRKLRG 137
P Q AG PA P G + G G A APG K
Sbjct: 293 AAPAVPPPAAAQNGGSAGAA-----PA-PAPAAGGPAGVSGQPGPGAAAAAPAPGVKAE- 345
Query: 138 EPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRP--- 194
PK + P+ + +G + AA +G P P A PPAP P P
Sbjct: 346 SPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGAL-PSPAAVPPPAPGTPTGLPKGA 404
Query: 195 --------ARPPRPYFP--RPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVL 244
+R P R PT P PP P + L PP V R
Sbjct: 405 AGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQL-PPGMVLVRSENG 463
Query: 245 TPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPT 304
+ + AL + ++ + ++ R A + + S+ +A G+ ++ RQ PT
Sbjct: 464 QLLMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIA--RQVTPT 521
Query: 305 RAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQ 364
PS Q QP+L+ A+ A G + + G
Sbjct: 522 TIIKQVSQAQTTVQ-----PSATLQRSPGVQPQLVLGGAAQTASLGTATAVQTGTPQRTV 576
Query: 365 PYALTRFPAS 374
P A T A+
Sbjct: 577 PGATTTSSAA 586
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 62.4 bits (150), Expect = 7e-10
Identities = 99/362 (27%), Positives = 126/362 (34%), Gaps = 41/362 (11%)
Query: 28 LGALPPDRSPTPRSRVSPGVTSLAVGP---GNPTRCQRSGVPYEGPGAPGGQQLRKSRAR 84
L AL P + PR +P + L+ P +P+ +S P P P L A
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLAT 336
Query: 85 -LPRTRQGRE-DAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKT- 141
LP + PA P S TSLG P + P L P
Sbjct: 337 PLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQA 396
Query: 142 ------PPGRSGPSGGVRSGAGHRA--------AAAEHQLGAGFSVRNGPGPPARLPPAP 187
PP ++ PS A A A H L A FS P PP + P +P
Sbjct: 397 PPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP--PSPPVQAPFSP 454
Query: 188 PG--PLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLT 245
P P+ A PP P PP PPS PP+ + APPP P L++
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 246 PPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTR 305
PP AL TP ++ L A + +PS+ S + QA P
Sbjct: 515 PPPQAPPAL-----ATPPLQA--LPSPPASFPGQAPFSPSASLPM-SPLATPPPQAPPVL 566
Query: 306 AFCSADPLPRPPSF----VPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAP 361
A P PP+ P P +V PR L ALA G P P P P+
Sbjct: 567 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPR-LTLALAPGPP----PPPSRSPSS 621
Query: 362 AL 363
L
Sbjct: 622 TL 623
Score = 54.7 bits (130), Expect = 1e-07
Identities = 90/374 (24%), Positives = 124/374 (33%), Gaps = 54/374 (14%)
Query: 21 AVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRK 80
A ++F L P +P P++ + + L P P S + P AP +
Sbjct: 376 ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL 435
Query: 81 SRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPK 140
+A A P P + P+ A +V + P
Sbjct: 436 LQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 495
Query: 141 TPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLP------PAPPGPLLRP 194
TPP ++ P + A ++ P PPA P P+ P+
Sbjct: 496 TPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPL 555
Query: 195 ARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCA- 253
A PP P+ PP P ++PP P + PP P V P L L A
Sbjct: 556 ATPP------PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 609
Query: 254 -LPERGSRTPSTRSAVLSG-RVAGLGTELTLTPSSRRAHGS------------------- 292
P SR+P S+ LSG +AG + T TP R + S
Sbjct: 610 GPPPPPSRSP---SSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 666
Query: 293 HALSSERQAAPTRAFCSAD--PLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRG 350
H + R AP AF A PLP PP+ P A G L P
Sbjct: 667 HPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG----SADG--------LCTIYETEGPES 714
Query: 351 RTPSP---RPGPAP 361
TP+P PGP+P
Sbjct: 715 ATPAPGALDPGPSP 728
Score = 54.3 bits (129), Expect = 2e-07
Identities = 102/358 (28%), Positives = 122/358 (34%), Gaps = 61/358 (17%)
Query: 34 DRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSR----ARLPRTR 89
+R+P P SPG S PG + R PG G + LR S AR T
Sbjct: 101 ERAP-PAKNTSPGPVS---SPGRASGTTR-------PGPLGQKGLRISAEETVARGKATE 149
Query: 90 QGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTP-PGRSGP 148
+ A RD + P P+ PA A + R G G P P GP
Sbjct: 150 APKRSALSAGARRDTSGPTPGTPS----PAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 205
Query: 149 SGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTP 208
V S + H P P AR P+ G L RPA P +
Sbjct: 206 RKSVSSASEHSTTE--------------PSPAARRRPSAGGGLQRPASRSLSSSATPLSS 251
Query: 209 PTCEPPSRKLPPPLPLCRSR------WVLAPP---PPVRPRLRVLTP----PLALRCALP 255
P PS + P P S+ L PP PP + L P PLA
Sbjct: 252 PARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSA 311
Query: 256 ERGSRTPSTRSAV--LSGRVAGLGTELTLTPSSRRAHGS-HALSSERQAAPTRAFCS--A 310
S+ P T A S L T L L P S A S L S P++A S +
Sbjct: 312 ALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGS 371
Query: 311 DPLPRPPSFVPSLP-SPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPYA 367
L SF+PS P SP A P L L AP P P +P L P A
Sbjct: 372 PTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQ--AP------PSPPASPPLSPLA 421
Score = 50.1 bits (118), Expect = 4e-06
Identities = 98/381 (25%), Positives = 128/381 (33%), Gaps = 64/381 (16%)
Query: 33 PDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGR 92
P SP P V+P + G R + E G GG + +S R TR
Sbjct: 29 PPGSPRPPPPVTPAALRVLGAAGAVGRKPLA----ERAGGIGGATIPESAPRAGPTRS-- 82
Query: 93 EDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGV 152
AG RN P S P S GR + A P + P + PGR+ SG
Sbjct: 83 --AGTSSRN-----PASRPPAS---------GRGERAPPAKNTSPGPVSSPGRA--SGTT 124
Query: 153 RSGA----GHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTP 208
R G G R +A E +V G A A R P P P P
Sbjct: 125 RPGPLGQKGLRISAEE-------TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMA 177
Query: 209 PTCEPPSRK--LPPPLPLCRSRWVLAPPPPVRPRLRVLTP---------PLALRCALPER 257
+ LP P P R R PP PR V + P A R
Sbjct: 178 RRSRAAGTEVGLPRPAPSARPR-----PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG 232
Query: 258 GSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPP 317
G + P++RS LS L + PS+R + A S+ + +A P
Sbjct: 233 GLQRPASRS--LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRK 290
Query: 318 SFVPSL----------PSPQAQGQAVRQPRLLRAALARGAP-RGRTPSPRPGPAPALQPY 366
P+L PSP A Q+ P L + + TP P P+P+ P
Sbjct: 291 DAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPS 350
Query: 367 ALTRFPASLSLPDLVFTSVGS 387
T + P TS+GS
Sbjct: 351 LQTLPSPPATPPSQATTSLGS 371
Score = 48.5 bits (114), Expect = 1e-05
Identities = 101/411 (24%), Positives = 126/411 (30%), Gaps = 90/411 (21%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
P +P+P VG P R P EGP S +
Sbjct: 167 PTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR 226
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAG-QGRVQGAAPGRKLRGEPK---------- 140
R AG G + R + S T L PAR+G R AP + +PK
Sbjct: 227 RPSAGGGLQ-RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV 285
Query: 141 TPPGRSG----------------PSGGVRSGAGHRAAAAEHQ--LGAGFSVRNGPGPPAR 182
TPP + PS ++S A A H L + PP+
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPS- 344
Query: 183 LPPAPPGPLLRPARPPRP------------------YFPRP-----RTPPTCEPPSRKLP 219
P APP P+ P P + P P TPP PP+ LP
Sbjct: 345 -PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP 403
Query: 220 PPLPLCRSRWVLAPP-PPVRPRLRVLTPP-------LALRCALPERGSRTPSTRSAVLSG 271
P + APP PP P L L P LA+ L S PS
Sbjct: 404 P---------LQAPPSPPASPPLSPLATPSPQAPNALAVHL-LQAPFSPPPSPPVQAPFS 453
Query: 272 RVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVP----SLPSPQ 327
A + TP S QA P+ A P PP+ P + P PQ
Sbjct: 454 PPASPPVSPSATPPS-------------QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 500
Query: 328 AQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPYALTRFPASLSLP 378
A P L + P TP + P+P F S SLP
Sbjct: 501 APPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 551
Score = 37.7 bits (86), Expect = 0.018
Identities = 51/165 (30%), Positives = 68/165 (41%), Gaps = 29/165 (17%)
Query: 223 PLCRSRWVLAPPPPVRPR---------LRVL-------TPPLALR------CALPERGSR 260
P R+ +L P PP PR LRVL PLA R +PE R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 261 TPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFV 320
TRSA S R + + RA + S ++P RA + P P +
Sbjct: 77 AGPTRSAGTSSR--NPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 321 P-SLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPG-PAPAL 363
S A+G+A P+ R+AL+ GA R T P PG P+PA+
Sbjct: 135 RISAEETVARGKATEAPK--RSALSAGARRD-TSGPTPGTPSPAM 176
Score = 32.0 bits (71), Expect = 1.0
Identities = 52/182 (28%), Positives = 62/182 (34%), Gaps = 29/182 (15%)
Query: 33 PDRSPTPR--SRVSPGVTSLAVGPGNPTRCQRS-GVPYEGPGAPGGQQLRKSRARLPRTR 89
P R PTP + VS +LA+ PG P RS GP G S R
Sbjct: 586 PRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGY 645
Query: 90 QGREDAGVGRR---------------NRDPAEPGSLRPTS---LGFPARAGQGRVQGAAP 131
+ G +R PA P + R L +P G G G
Sbjct: 646 DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCT 705
Query: 132 GRKLRG-EPKTP-PGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG 189
+ G E TP PG P + G AA A GAG S R+ ARL P G
Sbjct: 706 IYETEGPESATPAPGALDPGPSPGTSGGKAAAGA----GAGASSRSPK--QARLGELPLG 759
Query: 190 PL 191
L
Sbjct: 760 AL 761
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 61.6 bits (148), Expect = 1e-09
Identities = 88/345 (25%), Positives = 115/345 (33%), Gaps = 85/345 (24%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
PP P P P + L G P+ + P G G PG L+
Sbjct: 257 PPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ------------ 304
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQ-GAAPGRKLRGEPKTPPGRSGPSG 150
AG ++ P +P G P +A QG+ G +P
Sbjct: 305 ---AGPLLQHPGPPQP-------FGLPPQASQGQAPLGTSP------------------- 335
Query: 151 GVRSGAGHRAAAAEH---QLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRT 207
AAA H QL A S PP R P PP PL P P P P P+
Sbjct: 336 ---------AAAYPHTSLQLPASQSALQSQQPP-REQPLPPAPLAMPHIKPPPTTPIPQL 385
Query: 208 PPTCEPPSRKLPP----PLPLCRSRWVLAPPPPVRPRLRVLT--------PPLAL---RC 252
P P + K PP P P + L PPP ++P + T PPL L
Sbjct: 386 P---APQAHKHPPHLSGPSPFSMNA-NLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 441
Query: 253 ALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADP 312
LP ++ P + L P+S G H ++ + A F P
Sbjct: 442 PLPSSPAQPPGLTQS----------QNLPPPPASHPPTGLHQVAPQPPFA-QHPFVPGGP 490
Query: 313 LPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRP 357
P P PS +P A QP AA + G+ G + P P
Sbjct: 491 PPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLP 535
Score = 44.7 bits (104), Expect = 2e-04
Identities = 71/263 (26%), Positives = 93/263 (35%), Gaps = 36/263 (13%)
Query: 130 APGRKLRGEPKTP-PGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPP 188
AP G P+ P PG + + V A+ A +Q A P P + AP
Sbjct: 196 APSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAP----TAPVPHTHIQQAPA 251
Query: 189 GPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPP- 247
L P RPP P+ P P P PP PL S + P +P L PP
Sbjct: 252 ---LHPQRPPSPH-PPPHPSPH--------PPLQPLTGSAGQPSAPSHAQPPLHGQGPPG 299
Query: 248 ---LALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPT 304
L L G P S A LGT +P++ H S L + + A +
Sbjct: 300 PHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGT----SPAAAYPHTSLQLPASQSALQS 355
Query: 305 RAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSP-----RPGP 359
+ PLP P +P + P P+L + P PSP P
Sbjct: 356 QQPPREQPLPPAPLAMPHIKPP----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP 411
Query: 360 APALQPYA--LTRFPASLSLPDL 380
PAL+P + T P S P L
Sbjct: 412 PPALKPLSSLSTHHPPSAHPPPL 434
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 61.6 bits (148), Expect = 1e-09
Identities = 88/345 (25%), Positives = 115/345 (33%), Gaps = 85/345 (24%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
PP P P P + L G P+ + P G G PG L+
Sbjct: 811 PPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ------------ 858
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQ-GAAPGRKLRGEPKTPPGRSGPSG 150
AG ++ P +P G P +A QG+ G +P
Sbjct: 859 ---AGPLLQHPGPPQP-------FGLPPQASQGQAPLGTSP------------------- 889
Query: 151 GVRSGAGHRAAAAEH---QLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRT 207
AAA H QL A S PP R P PP PL P P P P P+
Sbjct: 890 ---------AAAYPHTSLQLPASQSALQSQQPP-REQPLPPAPLAMPHIKPPPTTPIPQL 939
Query: 208 PPTCEPPSRKLPP----PLPLCRSRWVLAPPPPVRPRLRVLT--------PPLAL---RC 252
P P + K PP P P + L PPP ++P + T PPL L
Sbjct: 940 P---APQAHKHPPHLSGPSPFSMNA-NLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 253 ALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADP 312
LP ++ P + L P+S G H ++ + A F P
Sbjct: 996 PLPSSPAQPPGLTQS----------QNLPPPPASHPPTGLHQVAPQPPFA-QHPFVPGGP 1044
Query: 313 LPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRP 357
P P PS +P A QP AA + G+ G + P P
Sbjct: 1045 PPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLP 1089
Score = 44.7 bits (104), Expect = 2e-04
Identities = 71/263 (26%), Positives = 93/263 (35%), Gaps = 36/263 (13%)
Query: 130 APGRKLRGEPKTP-PGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPP 188
AP G P+ P PG + + V A+ A +Q A P P + AP
Sbjct: 750 APSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAP----TAPVPHTHIQQAPA 805
Query: 189 GPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPP- 247
L P RPP P+ P P P PP PL S + P +P L PP
Sbjct: 806 ---LHPQRPPSPH-PPPHPSPH--------PPLQPLTGSAGQPSAPSHAQPPLHGQGPPG 853
Query: 248 ---LALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPT 304
L L G P S A LGT +P++ H S L + + A +
Sbjct: 854 PHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGT----SPAAAYPHTSLQLPASQSALQS 909
Query: 305 RAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSP-----RPGP 359
+ PLP P +P + P P+L + P PSP P
Sbjct: 910 QQPPREQPLPPAPLAMPHIKPP----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP 965
Query: 360 APALQPYA--LTRFPASLSLPDL 380
PAL+P + T P S P L
Sbjct: 966 PPALKPLSSLSTHHPPSAHPPPL 988
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 61.6 bits (148), Expect = 1e-09
Identities = 88/345 (25%), Positives = 115/345 (33%), Gaps = 85/345 (24%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
PP P P P + L G P+ + P G G PG L+
Sbjct: 811 PPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ------------ 858
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQ-GAAPGRKLRGEPKTPPGRSGPSG 150
AG ++ P +P G P +A QG+ G +P
Sbjct: 859 ---AGPLLQHPGPPQP-------FGLPPQASQGQAPLGTSP------------------- 889
Query: 151 GVRSGAGHRAAAAEH---QLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRT 207
AAA H QL A S PP R P PP PL P P P P P+
Sbjct: 890 ---------AAAYPHTSLQLPASQSALQSQQPP-REQPLPPAPLAMPHIKPPPTTPIPQL 939
Query: 208 PPTCEPPSRKLPP----PLPLCRSRWVLAPPPPVRPRLRVLT--------PPLAL---RC 252
P P + K PP P P + L PPP ++P + T PPL L
Sbjct: 940 P---APQAHKHPPHLSGPSPFSMNA-NLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 253 ALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADP 312
LP ++ P + L P+S G H ++ + A F P
Sbjct: 996 PLPSSPAQPPGLTQS----------QNLPPPPASHPPTGLHQVAPQPPFA-QHPFVPGGP 1044
Query: 313 LPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRP 357
P P PS +P A QP AA + G+ G + P P
Sbjct: 1045 PPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLP 1089
Score = 44.7 bits (104), Expect = 2e-04
Identities = 71/263 (26%), Positives = 93/263 (35%), Gaps = 36/263 (13%)
Query: 130 APGRKLRGEPKTP-PGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPP 188
AP G P+ P PG + + V A+ A +Q A P P + AP
Sbjct: 750 APSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAP----TAPVPHTHIQQAPA 805
Query: 189 GPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPP- 247
L P RPP P+ P P P PP PL S + P +P L PP
Sbjct: 806 ---LHPQRPPSPH-PPPHPSPH--------PPLQPLTGSAGQPSAPSHAQPPLHGQGPPG 853
Query: 248 ---LALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPT 304
L L G P S A LGT +P++ H S L + + A +
Sbjct: 854 PHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGT----SPAAAYPHTSLQLPASQSALQS 909
Query: 305 RAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSP-----RPGP 359
+ PLP P +P + P P+L + P PSP P
Sbjct: 910 QQPPREQPLPPAPLAMPHIKPP----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP 965
Query: 360 APALQPYA--LTRFPASLSLPDL 380
PAL+P + T P S P L
Sbjct: 966 PPALKPLSSLSTHHPPSAHPPPL 988
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 61.6 bits (148), Expect = 1e-09
Identities = 109/399 (27%), Positives = 147/399 (36%), Gaps = 65/399 (16%)
Query: 3 PVGRSRSENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQR 62
P R RS + AR + T A RS TP R S T G R
Sbjct: 567 PATRGRSRSRTPARRGRSRSRT----PARRRSRSRTPTRRRSRSRTPARRGRS------R 616
Query: 63 SGVPYEGPGAPGGQQLRKSRARLPRTRQGRE----DAGVGR-RNRDPAEPGSLRPTSLGF 117
S P R+SR+R P R GR A GR R+R PA G R +
Sbjct: 617 SRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT--- 673
Query: 118 PARAGQGRVQGAAPGRKLRGEPKTPP-GRSGPSGGVRSGAGH-RAAAAEHQLGAGFSVRN 175
PAR GR + P R+ R +TP GRS VR G H R + G+ +N
Sbjct: 674 PARRS-GRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN 732
Query: 176 GPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAP-- 233
R + P ++ +R R + P K L L RS +P
Sbjct: 733 KSRTSQRRSRSNSSPEMKKSRISS------RRSRSLSSPRSKAKSRLSLRRSLSGSSPCP 786
Query: 234 -----PPPVR-------PRLRVLTPPLALRCAL---PERGSRTPSTRS--------AVLS 270
PP R P+ + TPP R + P++ S+TPS +S V S
Sbjct: 787 KQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKS 846
Query: 271 GRVAGLGT-------ELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSL 323
G G+ E ++TP R S + P+R CS PR S P
Sbjct: 847 GTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPR 906
Query: 324 PSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPA 362
SP QP+ ++A + +PR R+ S P+P+
Sbjct: 907 QSPSRSSSP--QPK-VKAII---SPRQRSHSGSSSPSPS 939
Score = 43.5 bits (101), Expect = 3e-04
Identities = 104/437 (23%), Positives = 150/437 (34%), Gaps = 93/437 (21%)
Query: 32 PPDRSPTP-RSRVSPGVTS--------------LAVGPGNPTRCQRSGVPYEGPGAPGGQ 76
P RS TP R R SP V+S A P T +R P P G
Sbjct: 1714 PETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSP---KPRGL 1770
Query: 77 QLRKSRARLPRTRQGREDAGVG---------RRNRDPAEPGSLRPTSLGFPARAGQGRVQ 127
Q +SR+R +TR R G +R+R + R G+ +R+ +
Sbjct: 1771 QRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQES 1830
Query: 128 GAAPGRKLRGEPKTPP-------GRSGPSGGVRSG-----AGHRAAAAEHQLGAGFSVRN 175
R+ RG +TPP R+ P+ RS A HR + + L + R+
Sbjct: 1831 SRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRS 1890
Query: 176 GPGPPARL----------------------------PPAPPGPLLRPARPPRPYFPRPRT 207
P +R P R P R RT
Sbjct: 1891 RTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRT 1950
Query: 208 PPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSA 267
PP SR PP+ RSR P R R R T P+ R + R S RS
Sbjct: 1951 PPVTRRRSRSRTPPVTRRRSR--SRTSPITRRRSRSRTSPVTRRRS-RSRTSPVTRRRSR 2007
Query: 268 VLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLP-RPPSFVPSLPSP 326
+ V + P+ RR S R+ + +R+ PL R S + +
Sbjct: 2008 SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRS-----PLAIRRRSRSRTPRTA 2062
Query: 327 QAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPYALTRFPASLSLPDLVFTSVG 386
+ + R P +R A G+ R+ S P PA + ++ +R P ++
Sbjct: 2063 RGKRSLTRSPPAIRRRSASGSSSDRSRSATP---PATRNHSGSRTPP---------VALN 2110
Query: 387 SSLVIC-----LVPTPL 398
SS + C + PTPL
Sbjct: 2111 SSRMSCFSRPSMSPTPL 2127
Score = 39.7 bits (91), Expect = 0.005
Identities = 88/373 (23%), Positives = 123/373 (32%), Gaps = 72/373 (19%)
Query: 26 EVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSG----------VPYEG------ 69
E+ LP S RS SPG+ G G P+R SG P G
Sbjct: 1426 EMKDGLPRTPSRRSRSGSSPGLRD---GSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDS 1482
Query: 70 -PGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPG----SLRPTSLGFPARAGQG 124
P Q + R+R P + + +R R +E ++ T LG +R+G
Sbjct: 1483 SPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSS 1542
Query: 125 RVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPP---- 180
+ P +P RS S A R + R+G P
Sbjct: 1543 QELDVKPSA-------SPQERSESDSSPDSKAKTRTPLRQRS-------RSGSSPEVDSK 1588
Query: 181 ARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPR 240
+RL P R P +PR P + S P P AP P PR
Sbjct: 1589 SRLSPRRS----RSGSSPEVK-DKPRAAPRAQSGSDSSPEPK---------APAPRALPR 1634
Query: 241 LRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSS------RRAHGSHA 294
R PE S T S+ R A G+ + P + RR +
Sbjct: 1635 RSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSS 1694
Query: 295 LSSERQAAPTRAFCSADPLPRPPSFVP---------SLPSPQAQGQAVRQPRLLRAALAR 345
R+A +R SA P S P S P P + ++ R+ R + +
Sbjct: 1695 PELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTK 1754
Query: 346 GAPR-GRTPSPRP 357
R GR+PSP+P
Sbjct: 1755 TTSRRGRSPSPKP 1767
Score = 38.9 bits (89), Expect = 0.008
Identities = 73/320 (22%), Positives = 103/320 (32%), Gaps = 17/320 (5%)
Query: 37 PTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAG 96
P +SR P S P + + S +P + R R + E A
Sbjct: 1678 PKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAE 1737
Query: 97 VGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGA 156
R +R S R + R+ + +G R KT R G
Sbjct: 1738 KSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQST 1797
Query: 157 GHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSR 216
R + + R G G +R P R R RTPPT SR
Sbjct: 1798 SRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRG----RSRTPPTSRKRSR 1853
Query: 217 KLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGL 276
P P RSR +P R R R PL R R +R++ +S R +
Sbjct: 1854 SRTSPAPWKRSRSRASPATHRRSRSRT---PLISR--------RRSRSRTSPVSRRRSRS 1902
Query: 277 GTELTLTPSSRRAHGSHALSSERQAAPT--RAFCSADPLPRPPSFVPSLPSPQAQGQAVR 334
T +T S RA S + P R S P R S + P + + ++
Sbjct: 1903 RTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRT 1962
Query: 335 QPRLLRAALARGAPRGRTPS 354
P R + +R +P R S
Sbjct: 1963 PPVTRRRSRSRTSPITRRRS 1982
Score = 36.2 bits (82), Expect = 0.053
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Query: 220 PPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTE 279
P P + V +P P + +R PP +R R+ S+ S+ S + +
Sbjct: 2569 PVQPEVALKRVPSPTPAPKEAVREGRPP---EPTPAKRKRRSSSSSSSSSSSSSSSSSSS 2625
Query: 280 LTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSP-QAQGQAVRQP-R 337
+ + SS + S + SS ++P+ A LP+P S P P P + + ++ R+P
Sbjct: 2626 SSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS--PKKPPPGERRSRSPRKPID 2683
Query: 338 LLR--AALARGAPRGRTPSPRPGP 359
LR +L+ R PSP+P P
Sbjct: 2684 SLRDSRSLSYSPVERRRPSPQPSP 2707
Score = 33.1 bits (74), Expect = 0.45
Identities = 83/369 (22%), Positives = 114/369 (30%), Gaps = 49/369 (13%)
Query: 35 RSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGRED 94
RSPTP+S+ + T +S + A SR+R
Sbjct: 230 RSPTPKSK-RKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHT 288
Query: 95 AGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPP-GRSGPSGGVR 153
+ R+ PA R G+G + PG P +P PS
Sbjct: 289 TALAGRSPSPAS------------GRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYE 336
Query: 154 S-GAGHRAAAAEHQLGAGFSVRNGPGPPARLP------PAPPGPLLRPARPPRPYFPRPR 206
+ +A + GP PPA P P PL P P
Sbjct: 337 DKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSE 396
Query: 207 TPPTCEPPSRKLPPPLPLCRSRWVLAP-PPPVRPRLRVLTPPLALRCALPERGSRTPSTR 265
PT + K P LP S P P P + + P + + A P GS +
Sbjct: 397 ASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPA-PAPGSHREISS 455
Query: 266 SAVLSGRVAGLG---TELTLTPSSR----RAHGSHALSSERQAAPTRAFCSADPLP---- 314
S R G + TPS R R+ + R PT+ S P
Sbjct: 456 SPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRR 515
Query: 315 ----------RPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQ 364
R P SPQ G + R R +R A RGR+ S +PA +
Sbjct: 516 SRSAQRWGRSRSPQRRGRSRSPQRPGWS-RSRNTQRRGRSRSARRGRSHS----RSPATR 570
Query: 365 PYALTRFPA 373
+ +R PA
Sbjct: 571 GRSRSRTPA 579
Score = 32.0 bits (71), Expect = 1.0
Identities = 90/343 (26%), Positives = 121/343 (35%), Gaps = 47/343 (13%)
Query: 79 RKSRARLP----RTRQGREDAGVGRRNRDPAEPGSLRPT-SLGFPARAGQGRVQGAAPGR 133
R+SR+R P R + R RR+R P + R + S P + R + +P
Sbjct: 1956 RRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSR-TSPVT 2014
Query: 134 KLRGEPKTPPG-----RSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPA--RLPPA 186
+ R +TPP RS R + R+ A + + R G + R PPA
Sbjct: 2015 RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPA 2074
Query: 187 --------PPGPLLRPARPPRPY-FPRPRTPPTCEPPSRKL--------PPPLPLCRSRW 229
R A PP RTPP SR P PL CRS
Sbjct: 2075 IRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPG 2134
Query: 230 VLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRA 289
+L P R + VL A + G R P + + A L LT S
Sbjct: 2135 MLEPLGSSRTPMSVLQQ--AGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAISL-- 2190
Query: 290 HGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPR 349
G+ AA A S P P P + SL + A A R P +A A
Sbjct: 2191 -GTARPPPSMSAAGLAARMSQVPAPVP---LMSLRTAPAANLASRIP--AASAAAMNLAS 2244
Query: 350 GRTPSPRPGPAPALQPYALTRFPASLSLPDLVF--TSVGSSLV 390
RTP+ P A +R PA+ + +L T+V S V
Sbjct: 2245 ARTPA-----IPTAVNLADSRTPAAAAAMNLASPRTAVAPSAV 2282
Score = 31.6 bits (70), Expect = 1.3
Identities = 33/141 (23%), Positives = 51/141 (36%), Gaps = 15/141 (10%)
Query: 123 QGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPAR 182
+GR P ++ R + S S S + ++++ + S + P+
Sbjct: 2592 EGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS- 2650
Query: 183 LPPAPPGPLLRPARPPRPYFPRPRTP---PTCEPPSRKLPPPLPLCRSRWVLAPPPPVRP 239
PA PGP P+P +P P E SR P+ R L+ P R
Sbjct: 2651 --PAKPGPQA---------LPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERR 2699
Query: 240 RLRVLTPPLALRCALPERGSR 260
R P + + ERGSR
Sbjct: 2700 RPSPQPSPRDQQSSSSERGSR 2720
Score = 30.4 bits (67), Expect = 2.9
Identities = 52/191 (27%), Positives = 68/191 (35%), Gaps = 26/191 (13%)
Query: 204 RPRTPPTCEPPSRKLPPPLPLCRS--RWVLAPPPPVRPRLRVLTPPLALRCALPERG--- 258
R RTP T SR P RS RW + P R R R P R +R
Sbjct: 496 RSRTP-TKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRS 554
Query: 259 ---------SRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHG-SHALSSERQAAPTRAFC 308
SR+P+TR S A G + TP+ RR+ + R P R
Sbjct: 555 RSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR-- 612
Query: 309 SADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPR---PGPAPALQP 365
R S P+ + + R+ R A G R RTP+ R PA +
Sbjct: 613 -----GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRG 667
Query: 366 YALTRFPASLS 376
+ +R PA S
Sbjct: 668 RSRSRTPARRS 678
Score = 28.9 bits (63), Expect = 8.5
Identities = 72/305 (23%), Positives = 102/305 (33%), Gaps = 43/305 (14%)
Query: 102 RDPAEP-----GSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRS--GPSGGVRS 154
R P P G+ P +L + G G AA P+ P + GP +
Sbjct: 2288 RTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHAT 2347
Query: 155 G----AGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPAR------PPRPYFPR 204
AG R AAA S R P +P PL R PP R
Sbjct: 2348 APVNIAGSRTAAALAPASLT-SARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRAR 2406
Query: 205 PRTPPTCEPPSRKLPPPLPLCRSRWVLAPP----PPVRPRLRVLTPPL---ALRCAL--- 254
RTPP+ SR P SR AP PP + + R P RC +
Sbjct: 2407 SRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQT 2466
Query: 255 -PERGSRTPSTRSAVLSGRVAG-------------LGTELTLTPSSRRAHGSHALSSERQ 300
P GS++ S+ + + AG +++ P+S A AL++ +
Sbjct: 2467 TPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQP 2526
Query: 301 AAPTR-AFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGP 359
A R + S+ S S S + G + + R PSP P P
Sbjct: 2527 AKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAP 2586
Query: 360 APALQ 364
A++
Sbjct: 2587 KEAVR 2591
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 60.5 bits (145), Expect = 3e-09
Identities = 96/357 (26%), Positives = 120/357 (33%), Gaps = 61/357 (17%)
Query: 28 LGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPR 87
L AL P + PR +P + L+ P + P AP S LP
Sbjct: 268 LQALRPPQVTPPRKDAAPALGPLSSSP----------LATPSPSAPPSPSAPPSLQTLPS 317
Query: 88 TRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKT------ 141
PA P S TSLG P + P L P
Sbjct: 318 P---------------PATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA 362
Query: 142 -PPGRSGPSGGVRSGAGHRA--------AAAEHQLGAGFSVRNGPGPPARLPPAPPG--P 190
PP ++ PS A A A H L A FS P PP + P +PP P
Sbjct: 363 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP--PSPPVQAPFSPPASPP 420
Query: 191 LLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLAL 250
+ A PP P PP PPS PP+ + APPP P L++ PP
Sbjct: 421 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQA 480
Query: 251 RCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSA 310
AL TP ++ L A + +PS+ S + QA P A
Sbjct: 481 PPAL-----ATPPLQA--LPSPPASFPGQAPFSPSASLPM-SPLATPPPQAPPVLAAPLL 532
Query: 311 DPLPRPPSF----VPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPAL 363
P PP+ P P +V PR L ALA G P P P P+ L
Sbjct: 533 QVPPSPPASPTLQAPRRPPTPGPDTSVSGPR-LTLALAPGPP----PPPSRSPSSTL 584
Score = 54.7 bits (130), Expect = 1e-07
Identities = 90/374 (24%), Positives = 124/374 (33%), Gaps = 54/374 (14%)
Query: 21 AVYTFEVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRK 80
A ++F L P +P P++ + + L P P S + P AP +
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL 396
Query: 81 SRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPK 140
+A A P P + P+ A +V + P
Sbjct: 397 LQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 456
Query: 141 TPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLP------PAPPGPLLRP 194
TPP ++ P + A ++ P PPA P P+ P+
Sbjct: 457 TPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPL 516
Query: 195 ARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCA- 253
A PP P+ PP P ++PP P + PP P V P L L A
Sbjct: 517 ATPP------PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 570
Query: 254 -LPERGSRTPSTRSAVLSG-RVAGLGTELTLTPSSRRAHGS------------------- 292
P SR+P S+ LSG +AG + T TP R + S
Sbjct: 571 GPPPPPSRSP---SSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 627
Query: 293 HALSSERQAAPTRAFCSAD--PLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRG 350
H + R AP AF A PLP PP+ P A G L P
Sbjct: 628 HPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG----SADG--------LCTIYETEGPES 675
Query: 351 RTPSP---RPGPAP 361
TP+P PGP+P
Sbjct: 676 ATPAPGALDPGPSP 689
Score = 53.9 bits (128), Expect = 2e-07
Identities = 98/379 (25%), Positives = 126/379 (33%), Gaps = 56/379 (14%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
P +P+P VG P R P EGP S +
Sbjct: 158 PTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR 217
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAG-QGRVQGAAPGRKLRGEPK---------- 140
R AG G + R + S T L PAR+G R AP + +PK
Sbjct: 218 RPSAGGGLQ-RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV 276
Query: 141 TPPGR-SGPSGGVRSGA--GHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPA-R 196
TPP + + P+ G S + + +A A S++ P PPA P L P +
Sbjct: 277 TPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ 336
Query: 197 PPRPYFPRP-----RTPPTCEPPSRKLPPPLPLCRSRWVLAPP-PPVRPRLRVLTPP--- 247
+ P P TPP PP+ LPP + APP PP P L L P
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPALALPP---------LQAPPSPPASPPLSPLATPSPQ 387
Query: 248 ----LALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAP 303
LA+ L S PS A + TP S QA P
Sbjct: 388 APNALAVHL-LQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS-------------QAPP 433
Query: 304 TRAFCSADPLPRPPSFVP----SLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGP 359
+ A P PP+ P + P PQA P L + P TP + P
Sbjct: 434 SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP 493
Query: 360 APALQPYALTRFPASLSLP 378
+P F S SLP
Sbjct: 494 SPPASFPGQAPFSPSASLP 512
Score = 53.5 bits (127), Expect = 3e-07
Identities = 106/392 (27%), Positives = 130/392 (33%), Gaps = 93/392 (23%)
Query: 34 DRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSR----ARLPRTR 89
+R+P P SPG S PG + R PG G + LR S AR T
Sbjct: 92 ERAP-PAKNTSPGPVS---SPGRASGTTR-------PGPLGQKGLRISAEETVARGKATE 140
Query: 90 QGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTP-PGRSGP 148
+ A RD + P P+ PA A + R G G P P GP
Sbjct: 141 APKRSALSAGARRDTSGPTPGTPS----PAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 196
Query: 149 SGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPA------------- 195
V S + H P P AR P+ G L RPA
Sbjct: 197 RKSVSSASEHSTTE--------------PSPAARRRPSAGGGLQRPASRSLSSSATPLSS 242
Query: 196 -------------RPPRPYFPRPR-----TPPTCEPPSRKLPPPL-PLCRSRWVLAPPPP 236
P P P+P+ PP PP + P L PL S LA P P
Sbjct: 243 PARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS--PLATPSP 300
Query: 237 VRPRLRVLTPPLALRCALPERGSRTPSTRSAVL-SGRVAGLGTELTLTPSSRRAHGSHAL 295
P P L LP + PS + L S + + L P S A
Sbjct: 301 SAPPSPSAPPSLQ---TLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLA------ 351
Query: 296 SSERQAAPTRAFCSADPLPRPPSFVP----SLPSPQAQGQAVRQPRLLRAALARGAPRGR 351
+ QA P A P PP+ P + PSPQA P L L + AP
Sbjct: 352 TPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQA-------PNALAVHLLQ-APFSP 403
Query: 352 TPSP---RPGPAPALQPYALTRFPASLSLPDL 380
PSP P PA P + + P S + P L
Sbjct: 404 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSL 435
Score = 50.4 bits (119), Expect = 3e-06
Identities = 86/331 (25%), Positives = 119/331 (35%), Gaps = 49/331 (14%)
Query: 70 PGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGA 129
P P ++ + + R G+G + P + PT P +G+G + A
Sbjct: 38 PVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRA-GPTRTSRPPASGRG--ERA 94
Query: 130 APGRKLRGEPKTPPGRSGPSGGVRSGA----GHRAAAAEHQLGAGFSVRNGPGPPARLPP 185
P + P + PGR+ SG R G G R +A E +V G A
Sbjct: 95 PPAKNTSPGPVSSPGRA--SGTTRPGPLGQKGLRISAEE-------TVARGKATEAPKRS 145
Query: 186 APPGPLLRPARPPRPYFPRPRTPPTCEPPSRK--LPPPLPLCRSRWVLAPPPPVRPRLRV 243
A R P P P P + LP P P R R PP PR V
Sbjct: 146 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR-----PPTEGPRKSV 200
Query: 244 LTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAP 303
+ E + PS + GL R A S + S+ ++P
Sbjct: 201 --------SSASEHSTTEPSPAARRRPSAGGGL---------QRPASRSLSSSATPLSSP 243
Query: 304 TRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLR----AALARGAPRGR---TPSPR 356
R+ SA PR P+ PS P P+ QA+R P++ AA A G TPSP
Sbjct: 244 ARSGPSARGTPRAPAH-PSQPKPKGL-QALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 301
Query: 357 PGPAPALQPYALTRFPASLSLPDLVFTSVGS 387
P+P+ P T + P TS+GS
Sbjct: 302 APPSPSAPPSLQTLPSPPATPPSQATTSLGS 332
Score = 34.3 bits (77), Expect = 0.20
Identities = 47/159 (29%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 223 PLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLG----- 277
P R+ +L P PP PR PP AL G+ R L+ R G+G
Sbjct: 17 PAARAPGLLTPRPPGSPR----PPPPVTPAALRVLGAAGAVGRKP-LAERAGGIGGATIP 71
Query: 278 --------TELTLTPSS---RRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVP-SLPS 325
T + P+S RA + S ++P RA + P P + S
Sbjct: 72 ESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 131
Query: 326 PQAQGQAVRQPRLLRAALARGAPRGRTPSPRPG-PAPAL 363
A+G+A P+ R+AL+ GA R T P PG P+PA+
Sbjct: 132 TVARGKATEAPK--RSALSAGARRD-TSGPTPGTPSPAM 167
Score = 32.0 bits (71), Expect = 1.0
Identities = 52/182 (28%), Positives = 62/182 (34%), Gaps = 29/182 (15%)
Query: 33 PDRSPTPR--SRVSPGVTSLAVGPGNPTRCQRS-GVPYEGPGAPGGQQLRKSRARLPRTR 89
P R PTP + VS +LA+ PG P RS GP G S R
Sbjct: 547 PRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGY 606
Query: 90 QGREDAGVGRR---------------NRDPAEPGSLRPTS---LGFPARAGQGRVQGAAP 131
+ G +R PA P + R L +P G G G
Sbjct: 607 DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCT 666
Query: 132 GRKLRG-EPKTP-PGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG 189
+ G E TP PG P + G AA A GAG S R+ ARL P G
Sbjct: 667 IYETEGPESATPAPGALDPGPSPGTSGGKAAAGA----GAGASSRSPK--QARLGELPLG 720
Query: 190 PL 191
L
Sbjct: 721 AL 722
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 60.1 bits (144), Expect = 3e-09
Identities = 70/235 (29%), Positives = 84/235 (35%), Gaps = 62/235 (26%)
Query: 169 AGFSVRNGPGPPARLPPAP----PGPLLRPARP----------------PRPYFPRPRTP 208
AG GPG A P P GPL+ PA P PRP P P P
Sbjct: 118 AGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAP-PP 176
Query: 209 PTCEPPSRKLPPPLPLC---RSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTR 265
PT PP LPPPLP ++ V P P + L V+ PP+ CA P P T
Sbjct: 177 PTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVP--CAPPPPPPPPPPTP 234
Query: 266 SAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPS 325
L P+S + S++ P A P+P P +P
Sbjct: 235 PP--------------LPPAS--------VLSDKAVKPQLAPLHLPPIPPPLPLLPPCGY 272
Query: 326 PQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPYALTRFPASLSLPDL 380
P L+A A A + P P P P L PYA ASL P L
Sbjct: 273 PG-----------LKAEPASPAQDAQEP---PAPPPPLPPYASCSPRASLPAPPL 313
Score = 40.0 bits (92), Expect = 0.004
Identities = 58/194 (29%), Positives = 68/194 (35%), Gaps = 20/194 (10%)
Query: 177 PGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPS--RKLPPPLPLCRSRWVLAPP 234
P PP PP PP P A PP P P PP S R+ P + R L
Sbjct: 2 PVPPPPPPPLPPPPPPLGAPPP----PPPSAPPVSTDTSSLRRADP-----KGRSALLAD 52
Query: 235 PPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHA 294
RLR +T + R A P+ S + + S G T TL A G
Sbjct: 53 IQQGTRLRKVT-QINDRSA-PQIESSKGTNKEGGGSANTRGASTPPTL--GDLFAGGFPV 108
Query: 295 LSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAV--RQPRLLRAALARGAPRGRT 352
L Q P R PS P LP+ G + PRL + A GA R
Sbjct: 109 LRPAGQRDVAGGKTGQGPGSRAPS--PRLPNKTISGPLIPPASPRLGNTSEAHGAARTAP 166
Query: 353 PSPR-PGPAPALQP 365
P P P P P P
Sbjct: 167 PRPNVPAPPPPTPP 180
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 58.5 bits (140), Expect = 1e-08
Identities = 60/184 (32%), Positives = 71/184 (38%), Gaps = 18/184 (9%)
Query: 124 GRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPG----P 179
GR A PGR ++ EP G G G R E G S GPG P
Sbjct: 110 GRFLLAPPGRLVKAEPPEADGGGGYGCAPGLTRGPRGLKREGAPGPAASCMRGPGGRPPP 169
Query: 180 PARLPP-APPGPLLRPARPPRPYFPRPRTPPTCEPPSRKL--PPPLP---------LCRS 227
P PP +P GP PA PR FP P P P L PP P +
Sbjct: 170 PPDTPPLSPDGPARLPAPGPRASFPPPFGGPGFGAPGPGLHYAPPAPPAFGLFDDAAAAA 229
Query: 228 RWVLAPPPPVRPRLRVLTPPLALRCALPERGSRT-PSTRSAVLSGRVAGLGTELTLTPSS 286
+ PP R L PL L A P+RG R+ P R+A + AG G T + S
Sbjct: 230 AALGLAPPAARGLLTPPASPLELLEAKPKRGRRSWPRKRTATHTCSYAGCGKTYTKS-SH 288
Query: 287 RRAH 290
+AH
Sbjct: 289 LKAH 292
Score = 35.8 bits (81), Expect = 0.070
Identities = 56/195 (28%), Positives = 61/195 (31%), Gaps = 58/195 (29%)
Query: 175 NGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPP-----SRKLPPPL-----PL 224
+G G A P PP P PP Y+P P PP P S L P L P
Sbjct: 54 DGLGAEAAPEPPPPPP------PPAFYYPEPGAPPPYSAPAGGLVSELLRPELDAPLGPA 107
Query: 225 CRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTP 284
R++LAPP RL PP A + G G G LT
Sbjct: 108 LHGRFLLAPP----GRLVKAEPPEA------DGG---------------GGYGCAPGLT- 141
Query: 285 SSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALA 344
G L E P A C P RPP P P G A L
Sbjct: 142 -----RGPRGLKREGAPGPA-ASCMRGPGGRPPP-PPDTPPLSPDGP---------ARLP 185
Query: 345 RGAPRGRTPSPRPGP 359
PR P P GP
Sbjct: 186 APGPRASFPPPFGGP 200
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 58.2 bits (139), Expect = 1e-08
Identities = 101/405 (24%), Positives = 143/405 (35%), Gaps = 58/405 (14%)
Query: 30 ALPPDRSPTPRSRVSPGVTSLAVGPG---NPTRCQRSGVPYEGPGAPGGQQLRKSRARLP 86
A P ++PTP++ P T+ PG +P + P P A Q + LP
Sbjct: 644 AQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQD--SLQMFLP 701
Query: 87 RTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTP-PGR 145
+ R + + G PA P PA A +GA G + +P P
Sbjct: 702 QERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATPV-AKGAGLGPQAPDSQASPAPAP 760
Query: 146 SGPSGGVRSGAGHRAAAA-EHQLGAGFSVR----NGPGPPARLPPAPPGPLLRPARPPRP 200
P+ G G ++ + HQ G S + PP+R P P P+ PP
Sbjct: 761 QIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLH 820
Query: 201 YFPRPRTPPTCE-----PPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALP 255
P P+ PPT +PPP P PP+RP+ + PL LP
Sbjct: 821 PCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLP 880
Query: 256 ERGSRTPSTRSAVLSGRV-AGLGTELTLT-PSSRRAHGSHALSSERQAAPTRAFCSADPL 313
+ + S+ S R+ A ++ L P S+ H S P A A P
Sbjct: 881 PSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPA---APPP 937
Query: 314 PRPPSF------VPSLPSPQA--------------QGQAVRQPRLLRAALARG------- 346
P P +F P+LP P+A Q +A P + + + G
Sbjct: 938 PPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAA 997
Query: 347 -------APRGRTPSPRPGPAPALQPYALTRFPASLSLPDLVFTS 384
AP G +P PAPA P A T P L + F S
Sbjct: 998 SVLVSGQAPSGTPTAPSHAPAPA--PMAATGLPPLLPAENKAFAS 1040
Score = 50.1 bits (118), Expect = 4e-06
Identities = 64/228 (28%), Positives = 89/228 (39%), Gaps = 36/228 (15%)
Query: 161 AAAEHQLGAGFSVRNGP-GPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLP 219
AAA + +V+ P PPA P P G A+ P P+ TP PP P
Sbjct: 609 AAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQP----PQAPTPQAAAPPQATTP 664
Query: 220 PPLPLCRS---RWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTP--------STRSAV 268
P P S + VL PP P +LT +L+ LP+ S+ P S ++V
Sbjct: 665 QPSPGLASSPEKIVLGQPPSATP-TAILTQD-SLQMFLPQERSQQPLSAEGPHLSVPASV 722
Query: 269 LSGRVAGLGTELTLTPSSRRAH-GSHALSSERQAAPTRAFCSADPLPRP-PSFVPSLPSP 326
+ TP ++ A G A S+ AP +A PL P PS PSLP
Sbjct: 723 IVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQ 782
Query: 327 QAQGQAVRQPRLLRAALARGAPRGRTPSP-RPGPAPALQPYALTRFPA 373
G + P +P P RP P +P +++R P+
Sbjct: 783 APLGDSPHLP---------------SPHPTRPPSRPPSRPQSVSRPPS 815
Score = 40.4 bits (93), Expect = 0.003
Identities = 53/209 (25%), Positives = 66/209 (31%), Gaps = 51/209 (24%)
Query: 114 SLGFPARA--------GQGRVQGAAPGRKLRGEPKTPPG---RSGPSGGVRSGAGHRAAA 162
SLG P A G G + +APG + P P R G +GG S RA++
Sbjct: 1207 SLGLPIAASSEGHRLPGHGPLSSSAPGASTQPPPHLPTKLVIRHGGAGGSPSVTWARASS 1266
Query: 163 AEHQLGAGFSV-------RNGPGPPARLPPAPP------------------------GPL 191
+ + S +GP P PP
Sbjct: 1267 SLSSSSSSSSAASSLDADEDGPMPSRNRPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTA 1326
Query: 192 LRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVL-----TP 246
L P P P P T EPP R PPP P + + PPP P + L P
Sbjct: 1327 LDPVHQPPP---PPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCP 1383
Query: 247 PLALRCALPERGSRTPSTRSAVLSGRVAG 275
L LR E P +GR G
Sbjct: 1384 RLPLRKTYRENVG-GPGAPEGTPAGRARG 1411
Score = 36.2 bits (82), Expect = 0.053
Identities = 70/281 (24%), Positives = 101/281 (35%), Gaps = 30/281 (10%)
Query: 116 GFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVR--SGAGHRAAAAEHQLGAGFSV 173
GFPA A Q V P P PPG V + A+H L G +
Sbjct: 413 GFPAPALQANVFKQPPATTTGAAPPQPPGALSKPMSVHLLNQGSSIVIPAQHML-PGQNQ 471
Query: 174 RNGPGPPA-RLP------PAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPL-- 224
PG PA +LP PA G + A P P ++ L PL L
Sbjct: 472 FLLPGAPAVQLPQQLSALPANVGGQILAAAAPHTGGQLIANPILT---NQNLAGPLSLGP 528
Query: 225 -------CRSRWVLAPPPPVRPRLRVLTPPLALRC-ALPERGSRTPSTRSA--VLSGRVA 274
S +L+ P + + P++L +LP + P+ +A VL G
Sbjct: 529 VLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPAGPAATTVLQGVTL 588
Query: 275 GLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPR-PPSFVPSLPSPQAQGQAV 333
L + ++ +AAP + P P+ PP+ LP Q QA
Sbjct: 589 PPSAVAMLNTPDGLVQPATPAAATGEAAPV---LTVQPAPQAPPAVSTPLPLGLQQPQA- 644
Query: 334 RQPRLLRAALARGAPRGRTPSPRPGPAPALQPYALTRFPAS 374
+QP A P+ TP P PG A + + L + P++
Sbjct: 645 QQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSA 685
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 57.8 bits (138), Expect = 2e-08
Identities = 74/273 (27%), Positives = 98/273 (35%), Gaps = 51/273 (18%)
Query: 103 DPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAA 162
+P PG P RA GRV G P P PP +G
Sbjct: 37 NPFRPGDSEPPPAPGAQRAQMGRV-GEIPPPPPEDFPLPPPPLAGDGDD----------- 84
Query: 163 AEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPL 222
AE LG F P PP PP PL FP P PP E P
Sbjct: 85 AEGALGGAFP----PPPPPIEESFPPAPL------EEEIFPSPPPPPEEEG-----GPEA 129
Query: 223 PLCRSRWVLAPPPPVRPRLRVLTPPLAL--RCALPERGSRTPSTRSAVLSGRVAGLGTEL 280
P+ PPP +PR +V + L + +L + ++ ++ V SG V
Sbjct: 130 PI---------PPPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYV----PPP 176
Query: 281 TLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPS--------FVPSLPSPQAQGQA 332
TP S ++ A P ++ S+ PLP+ P+ V P P+ Q Q
Sbjct: 177 VATPFSSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQL 236
Query: 333 VRQPRLLRAALARGAPRGRTPSPRPGPAPALQP 365
Q + +LA PRG P+ P PAP P
Sbjct: 237 HVQSQTQPVSLANTQPRG-PPASSPAPAPKFSP 268
>gi|4508047 zyxin [Homo sapiens]
Length = 572
Score = 57.8 bits (138), Expect = 2e-08
Identities = 74/273 (27%), Positives = 98/273 (35%), Gaps = 51/273 (18%)
Query: 103 DPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAA 162
+P PG P RA GRV G P P PP +G
Sbjct: 37 NPFRPGDSEPPPAPGAQRAQMGRV-GEIPPPPPEDFPLPPPPLAGDGDD----------- 84
Query: 163 AEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPL 222
AE LG F P PP PP PL FP P PP E P
Sbjct: 85 AEGALGGAFP----PPPPPIEESFPPAPL------EEEIFPSPPPPPEEEG-----GPEA 129
Query: 223 PLCRSRWVLAPPPPVRPRLRVLTPPLAL--RCALPERGSRTPSTRSAVLSGRVAGLGTEL 280
P+ PPP +PR +V + L + +L + ++ ++ V SG V
Sbjct: 130 PI---------PPPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYV----PPP 176
Query: 281 TLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPS--------FVPSLPSPQAQGQA 332
TP S ++ A P ++ S+ PLP+ P+ V P P+ Q Q
Sbjct: 177 VATPFSSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQL 236
Query: 333 VRQPRLLRAALARGAPRGRTPSPRPGPAPALQP 365
Q + +LA PRG P+ P PAP P
Sbjct: 237 HVQSQTQPVSLANTQPRG-PPASSPAPAPKFSP 268
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 57.8 bits (138), Expect = 2e-08
Identities = 68/236 (28%), Positives = 84/236 (35%), Gaps = 39/236 (16%)
Query: 33 PDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRAR-LPRTRQG 91
PD S P + S G+ + P P +R+ P + +R + LP T
Sbjct: 157 PDLS-RPNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQ 215
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPS-- 149
R G P P ++P R G A P R P P G S P+
Sbjct: 216 RLHPG----REGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNE 271
Query: 150 -----------------GGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPA------ 186
G VR A +A L + N P PPAR PP+
Sbjct: 272 SAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSL-----LSNRPPPPARDPPSRGAAPP 326
Query: 187 PPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLR 242
PP P++R P P P EPPSR PPP P SR PPPP P LR
Sbjct: 327 PPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPP---SRTPAGPPPPPPPPLR 379
Score = 52.0 bits (123), Expect = 9e-07
Identities = 71/307 (23%), Positives = 104/307 (33%), Gaps = 65/307 (21%)
Query: 31 LPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQ 90
+P R+ PR P V++ + P + T R+ +P + R R LP +
Sbjct: 115 IPSSRAAAPR----PPVSAASGRPQDDTDSSRASLP---------ELPRMQRPSLPDLSR 161
Query: 91 GREDAGVGRRNRDPAEP-------GSLRPTSLGFPARAGQG----RVQGAAPGRKLR--- 136
+ G ++ A P + PT L + + PG++L
Sbjct: 162 PNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGR 221
Query: 137 -GEPKTPPGRSGPSG-GVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRP 194
G P PP + PS +R+G ++ A P PP R PP P P
Sbjct: 222 EGPPAPPPVKPPPSPVNIRTGPSGQSLAP-------------PPPPYRQPPGVPNGPSSP 268
Query: 195 ARPPRPYFPRPRTPPTCEPPS--RKLPPPLPLCRSRWVLA--PPPPVRPRLRVLTPPLAL 250
P P+ + P R L PP P S +L+ PPPP R
Sbjct: 269 TNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDP---------- 318
Query: 251 RCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSA 310
P RG+ P + +G + P R HGS S + P +
Sbjct: 319 ----PSRGAAPPPPPPVIRNG-----ARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAG 369
Query: 311 DPLPRPP 317
P P PP
Sbjct: 370 PPPPPPP 376
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 57.0 bits (136), Expect = 3e-08
Identities = 95/379 (25%), Positives = 131/379 (34%), Gaps = 99/379 (26%)
Query: 32 PPDRSPTPR-SRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQ 90
PP+ PTPR + PG + + + V ++ PGG+ + + R T
Sbjct: 1023 PPEGHPTPRPASPEPGRVATVL----------ASVKHKEAIGPGGEVVNRRR-----TLS 1067
Query: 91 GREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSG 150
G + R P E P G GR + P + G P + S
Sbjct: 1068 GPVTGLLATARRGPGESADPGPF-----VEDGTGRQRPRGPSKGEAGVEGPPLAKVEASA 1122
Query: 151 GVRSGAGHRAAAAEHQ-------LGAGFSVRNGPGPPAR-LPPAPPGPLL---------- 192
++ R A ++Q L +V+ P R P PP PL
Sbjct: 1123 TLK----RRIRAKQNQQENVKFILTESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTVR 1178
Query: 193 -RPARPPRPYFPRPRTPPTCEPPSRKLP--PPLPLCRSRWVLAPPPPVRPRLRVLTPPLA 249
RPA P PP EPP L PPLP PPV P+ VLT P+
Sbjct: 1179 RRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPK-PVLTQPVP 1237
Query: 250 LRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCS 309
+GS TP+++ L G + P +RAHG+ S + P A
Sbjct: 1238 KL-----QGSPTPTSKKVPLPGPGS---------PEVKRAHGTPPPVSPKPPPPPTA--- 1280
Query: 310 ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPYALT 369
P+P V LPS A P P P+PA QP
Sbjct: 1281 ----PKPVKAVAGLPSGSA-------------------------GPSPAPSPARQP---- 1307
Query: 370 RFPASLSLPDLVFTSVGSS 388
PA+L+ P S+G+S
Sbjct: 1308 --PAALAKPPGTPPSLGAS 1324
Score = 40.4 bits (93), Expect = 0.003
Identities = 70/246 (28%), Positives = 91/246 (36%), Gaps = 64/246 (26%)
Query: 139 PKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPAR---------LPPAPP- 188
P+ PP S G +G R A+E AG P PPA LPP PP
Sbjct: 1161 PEPPPPLSVYHNG--TGTVRRRPASEQ---AGPPELPPPPPPA-EPPPTDLAHLPPLPPP 1214
Query: 189 -GPLLRPARP---PRPYF--PRPRTPPTCEPPSRKLPPPLP-LCRSRWVLAPPPPVRPRL 241
G +PA+P P+P P P+ + P S+K+P P P + PPPV P+
Sbjct: 1215 EGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPK- 1273
Query: 242 RVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQA 301
PP P + VAGL PS S+
Sbjct: 1274 ----PPPPPTAPKPVKA--------------VAGL-------PSG---------SAGPSP 1299
Query: 302 APTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRL------LRAALARGAPRGRTPSP 355
AP+ A L +PP PSL + A+ + P L RAA A A P+P
Sbjct: 1300 APSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAP 1359
Query: 356 RPGPAP 361
G +P
Sbjct: 1360 PEGASP 1365
Score = 37.7 bits (86), Expect = 0.018
Identities = 61/261 (23%), Positives = 81/261 (31%), Gaps = 69/261 (26%)
Query: 139 PKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPP 198
P TP + + A H +++ E LG G PP P P+ R
Sbjct: 683 PPTPRATTRQDSSLGGRARHMSSSQE-LLGDG-------------PPGPSSPMSRSQEYL 728
Query: 199 RPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERG 258
P P TPP P R A PPV + R + PP P+
Sbjct: 729 LDEGPAPGTPPREARPGRH--------GHSIKRASVPPVPGKPRQVLPPGTSHFTPPQ-- 778
Query: 259 SRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPS 318
TP+ R AL AP A P PP+
Sbjct: 779 ------------------------TPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPT 814
Query: 319 FVPSLP-----SPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPAL---------- 363
P P SP +G A P+ + + AP G P P P P L
Sbjct: 815 ERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAP-GPAPPPVPTAVPTLCLPPEADAEP 873
Query: 364 -----QPYALTRFPASLSLPD 379
+ ++L R+ AS S P+
Sbjct: 874 GRPKKRAHSLNRYAASDSEPE 894
Score = 35.4 bits (80), Expect = 0.091
Identities = 36/134 (26%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 104 PAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAA 163
P GS PTS P A G PK PP + P V++ AG + +A
Sbjct: 1237 PKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKP-VKAVAGLPSGSA 1295
Query: 164 EHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLP--PP 221
GP P PP L +P P P PP+ P+ +P PP
Sbjct: 1296 ------------GPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPP 1343
Query: 222 LPLCRSRWVLAPPP 235
+ A PP
Sbjct: 1344 RAAAAAAAAAAAPP 1357
Score = 31.2 bits (69), Expect = 1.7
Identities = 85/367 (23%), Positives = 119/367 (32%), Gaps = 92/367 (25%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
PP PTP SP +T+ + GP A G K + LP T +
Sbjct: 634 PPPPEPTPADCQSPKMTTFQ----DSELSDELQAAMTGP-AEVGPTTEKPSSHLPPTPRA 688
Query: 92 --REDAGVGRRNRDPAEPGSLR---PTSLGFPARAGQGRV--QGAAPGRKLRGEPKTPPG 144
R+D+ +G R R + L P P Q + +G APG TPP
Sbjct: 689 TTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDEGPAPG--------TPPR 740
Query: 145 RSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPP-RPYFP 203
+ P H G S++ A +PP P P R PP +F
Sbjct: 741 EARPG--------------RH----GHSIKR-----ASVPPVPGKP--RQVLPPGTSHFT 775
Query: 204 RPRTPPTCEP--------------------PSRKLPPPLPLCRSRWVLAPPPPVRPRLRV 243
P+TP P P+ +L PP S L P R V
Sbjct: 776 PPQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPTERPMSPRSLPQSPTHRGFAYV 835
Query: 244 LTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAP 303
L P+ G P +AV L L P + G +++A
Sbjct: 836 LPQPVEGEVGPAAPGPAPPPVPTAV---------PTLCLPPEADAEPG----RPKKRAHS 882
Query: 304 TRAFCSADPLP-RPPSFVPSLPSPQA-------QGQAVRQP-----RLLRAALARGAPRG 350
+ ++D P R VP+ P A + +VR P + R+ PR
Sbjct: 883 LNRYAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRK 942
Query: 351 RTPSPRP 357
+ P P P
Sbjct: 943 KGPPPPP 949
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 57.0 bits (136), Expect = 3e-08
Identities = 107/362 (29%), Positives = 136/362 (37%), Gaps = 87/362 (24%)
Query: 72 APGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGF---PARAGQGRVQG 128
AP ++ R S A++ R AG GR PGS R LG PARA R
Sbjct: 97 APAPRRQRASSAQVRAARPAGMAAGTGRSG-----PGSAR-LGLGSGWDPARAVAPRAAR 150
Query: 129 AAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAA------EHQLGAGFS-VRNGPGPP- 180
A G L G SGP +R GA AAA Q G + + GPGP
Sbjct: 151 AL-GAALFGRAVHTAALSGPHCRLRCGARAFYAAAGGASSRRRQRGRNPALIVRGPGPRR 209
Query: 181 -ARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRP 239
L APPG L P P P++ PR PP PP L P R R + +RP
Sbjct: 210 GGGLTSAPPG--LPPLASPPPFWELPRPPPPPPPPGPALLPR----RLRELRGKEVGLRP 263
Query: 240 RLR-----VLTPPLALRCALPERGSRTPSTR--------SAVLSGR--------VAGLGT 278
R R V++P L RGSR SA+L+ AGLG
Sbjct: 264 RTRGWTTCVVSPNL-------RRGSRRAGNHRVREIEFGSALLAALNTLGPGSFGAGLGA 316
Query: 279 E--LTLTPSSRRAHGSH-----ALSSERQAAPTRAFCSADPL--PRPPSFVPSLPSPQAQ 329
+ + TP +GS LS ER + AF + L P P S+P+P +
Sbjct: 317 QGPRSSTPECPVVNGSEWGLAAPLSPERGSPGRPAFLRSPGLCGPGPVPGGLSVPTPCGR 376
Query: 330 ------------------------GQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQP 365
G+ R+ AAL +GAPR + P+ P +P P
Sbjct: 377 GAGDFSEADLADRAFPVRGAGPIAGRRRRRGWTFAAALRKGAPREQPPA-SPAASPCQAP 435
Query: 366 YA 367
A
Sbjct: 436 RA 437
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 57.0 bits (136), Expect = 3e-08
Identities = 88/363 (24%), Positives = 131/363 (36%), Gaps = 55/363 (15%)
Query: 26 EVLGALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARL 85
++ GA S R RV G+ + G T +R+G + ++ ++ AR+
Sbjct: 38 QLYGAQSRRVSVAERRRVWDGIAAKINGI---TSWKRTGQEVQKRWNDFKRRTKEKLARV 94
Query: 86 PRTRQGREDAGVGRRNRDP-----------AEPGSLRPTSLGFPARAGQGRVQGAAPGRK 134
P + QG A + + A PG+ A + Q A P R
Sbjct: 95 PHSTQGAGPAAEDAFSAEEETIFAILGPGVAAPGAGAGAEEPPAAPSSQPPPPSACPQRY 154
Query: 135 LRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRP 194
+ E + R+ S ++G+ ++ E + + G P + +PP L+P
Sbjct: 155 VLSEDRREDRRADTSAHSKAGS----SSPEPWARPSCTPQEGGCPRPKERESPPPSALQP 210
Query: 195 ARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCR-SRWVLAPPPPVRPRLRVLTPPLALRCA 253
+ PR P PP+ LPPP PL + + +PPPP RP
Sbjct: 211 VQLPRLALSPP-------PPAPPLPPPPPLAQVAPSPPSPPPPPRPP------------- 250
Query: 254 LPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPL 313
P + PS A EL T A S ALS+ P S P
Sbjct: 251 -PTLSASDPSLDFLRAQQETANAIRELAGTLRQGLAKLSEALSALLPLLPGTPVDSLPPP 309
Query: 314 -----PRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGA----------PRGRTPSPRPG 358
P PP P LP P + + +P + AA+ GA PR +PRP
Sbjct: 310 LPPPPPPPPPPRPVLPPPAPKVEITPEPVSVVAAVVDGAVVAARGVIIAPRSEEGAPRPP 369
Query: 359 PAP 361
PAP
Sbjct: 370 PAP 372
Score = 29.6 bits (65), Expect = 5.0
Identities = 43/158 (27%), Positives = 52/158 (32%), Gaps = 45/158 (28%)
Query: 212 EPPSR--KLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVL 269
EPP+ PPP C R+VL+ R A A + GS +P
Sbjct: 135 EPPAAPSSQPPPPSACPQRYVLSEDRREDRR--------ADTSAHSKAGSSSP------- 179
Query: 270 SGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPR----PPSFVPSLPS 325
E PS G ER++ P A LPR PP P LP
Sbjct: 180 ---------EPWARPSCTPQEGGCPRPKERESPPPSALQPVQ-LPRLALSPPPPAPPLPP 229
Query: 326 PQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPAL 363
P LA+ AP +P P P P P L
Sbjct: 230 PPP--------------LAQVAPSPPSPPPPPRPPPTL 253
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 57.0 bits (136), Expect = 3e-08
Identities = 70/233 (30%), Positives = 86/233 (36%), Gaps = 53/233 (22%)
Query: 145 RSGPSGGV--RSGAGHRAAAAEHQL---GAGFSVRNGP-----GPPARLPPAPPGPLLRP 194
R G GG R G G R + + G G + GP G PP PP P +
Sbjct: 9 RGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQ 68
Query: 195 ARPPRPYFPRPRTPPTCEPP------SRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPL 248
+ P P P P+ PP +PP ++ PPP P S+ V+A P P
Sbjct: 69 QQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAP--------- 119
Query: 249 ALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFC 308
+ A P S P+T SG G G T TP A T A
Sbjct: 120 GVGSAPPASSSAPPATPPT--SGAPPGSGPGPTPTP---------------PPAVTSAPP 162
Query: 309 SADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAP 361
A P P S VP+ P PQA G P AA+ G P P+ GP P
Sbjct: 163 GAPPPTPPSSGVPTTP-PQAGG-----PPPPPAAVP-----GPGPGPKQGPGP 204
Score = 33.1 bits (74), Expect = 0.45
Identities = 51/198 (25%), Positives = 62/198 (31%), Gaps = 48/198 (24%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPG-APGGQQLRKSRARLPRTRQ 90
PP + P P P P + V +GPG APG + + P
Sbjct: 77 PPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP---- 132
Query: 91 GREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQG-------RVQGAAPGRKLRGEPKTPP 143
PA P PTS G P +G G V A PG P TPP
Sbjct: 133 -------------PATP----PTS-GAPPGSGPGPTPTPPPAVTSAPPG----APPPTPP 170
Query: 144 GRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFP 203
P+ ++G AA GPGP + P P G P P P
Sbjct: 171 SSGVPTTPPQAGGPPPPPAAV----------PGPGPGPKQGPGPGG----PKGGKMPGGP 216
Query: 204 RPRTPPTCEPPSRKLPPP 221
+P P P PP
Sbjct: 217 KPGGGPGLSTPGGHPKPP 234
Score = 32.0 bits (71), Expect = 1.0
Identities = 53/216 (24%), Positives = 61/216 (28%), Gaps = 69/216 (31%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
PP P P P VTS G PT SGVP P A G
Sbjct: 142 PPGSGPGPTPTPPPAVTSAPPGAPPPTP-PSSGVPTTPPQAGG----------------- 183
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGG 151
P P + V G PG PK PG GP GG
Sbjct: 184 -----------PPPPPAA----------------VPGPGPG------PKQGPGPGGPKGG 210
Query: 152 VRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTC 211
G + G GP P P P R PR R PP
Sbjct: 211 KMPG----------------GPKPGGGPGLSTPGGHPKPPHRGGGEPRG--GRQHHPPYH 252
Query: 212 EPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPP 247
+ + PP P RS ++ + L +L P
Sbjct: 253 QQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRP 288
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 56.6 bits (135), Expect = 4e-08
Identities = 93/366 (25%), Positives = 126/366 (34%), Gaps = 71/366 (19%)
Query: 30 ALPPDRSPTPRSRVSPGVTSLAVGPGNPT--------RCQRSGVPYEGPGAPGGQQLRKS 81
A P RSP PRSR++ P T R RS P QLR+
Sbjct: 236 AAPGWRSPDPRSRLAAPPLGSTTLPSTWTAPQSRLTARPSRSPEPQIRESEQRDPQLRRK 295
Query: 82 RARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKT 141
+ R R + R DP PG + L PG+ L+ +P
Sbjct: 296 QQRWKEPLMPRREEKYPLRGTDPLPPGQPQRIPL---------------PGQPLQPQPIL 340
Query: 142 PPGRSG--PSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLP--PAPPGPLLRPARP 197
PG+ P+ G +HQ + G P P P PP P+ P RP
Sbjct: 341 TPGQPQKIPTPG------------QHQP----ILTPGHSQPIPTPGQPLPPQPIPTPGRP 384
Query: 198 ----PRPYFPRPRTPPTCEPPSR--KLPPPLPLCRSRWVLAP----------PPPVRPRL 241
P P RP TP + P R +LPPPL L R ++P P P+ P
Sbjct: 385 LTPQPIPTPGRPLTPQPIQMPGRPLRLPPPLRLLRPGQPMSPQLRQTQGLPLPQPLLPPG 444
Query: 242 RVLTPPLALRCALPERGSRT----PSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSS 297
+ + L+ P +R+ P+ RS + + GL L S R A + +
Sbjct: 445 QPKSAGRPLQPLPPGPDARSISDPPAPRSRLPIRLLRGLLARLPGGASPRAAAAAACTTM 504
Query: 298 ERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRG------R 351
+ A T P PP S + A P +A P G R
Sbjct: 505 KGWPAATMTPAETSPTMGPPD--ASAGFSIGEIAAAESPSATYSATFSCKPSGAASVDLR 562
Query: 352 TPSPRP 357
PSP+P
Sbjct: 563 VPSPKP 568
Score = 38.5 bits (88), Expect = 0.011
Identities = 48/163 (29%), Positives = 62/163 (38%), Gaps = 14/163 (8%)
Query: 224 LCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLT 283
L + VL P + PR P L+ PE + P R LS LGT
Sbjct: 122 LLQEAQVLQGSPELLPRS---PKPSGLQRLAPEEATALPLRRLCHLSLMEKDLGTTAHPR 178
Query: 284 PSSRRAHGSHALSSERQAAPTRAFCSADPLPRPP--SFVPSLPSPQAQGQAVRQPRLLRA 341
+H S A +S RQ+ P S P R P S PS P+ R LL
Sbjct: 179 GFPELSHKSTAAASSRQSRPRVRSASLPPRTRLPSGSQAPSAAHPK------RLSDLLLT 232
Query: 342 ALARGAPRGRTPSPRPGPAPALQPYALTRFPASLSLPDLVFTS 384
+ A AP R+P PR A P T P++ + P T+
Sbjct: 233 SRA-AAPGWRSPDPR--SRLAAPPLGSTTLPSTWTAPQSRLTA 272
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 56.6 bits (135), Expect = 4e-08
Identities = 80/272 (29%), Positives = 97/272 (35%), Gaps = 37/272 (13%)
Query: 139 PKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG--PLLRPAR 196
P +PP S A A H L A FS P PP + P +PP P+ A
Sbjct: 633 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP--PSPPVQAPFSPPASPPVSPSAT 690
Query: 197 PPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPE 256
PP P PP PPS PP+ + APPP P L+V P A + P
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA---SPPM 747
Query: 257 RGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSS-ERQAAPTRAFCSADPLPR 315
S TP R L L + PS + L+ QA P A LP
Sbjct: 748 SPSATPPPRVPPLLA-----APPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPS 802
Query: 316 PPSFVP---------SLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPY 366
PP+ P SLP + P +L A L + P P +P LQ
Sbjct: 803 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ-------VPPSPPASPTLQAP 855
Query: 367 ALTRFPASLSLPDLVFTSV-GSSLVICLVPTP 397
P PD TSV G L + L P P
Sbjct: 856 RRPPTPG----PD---TSVSGPRLTLALAPGP 880
Score = 52.0 bits (123), Expect = 9e-07
Identities = 97/401 (24%), Positives = 128/401 (31%), Gaps = 82/401 (20%)
Query: 33 PDRSPTPRSRVSPG---VTSLAVGPGNPTRCQRSG----------VPYEGPGAPGGQQLR 79
P SP P V+P V A G +R+G P GP G R
Sbjct: 29 PPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSR 88
Query: 80 KSRARLPRTRQGREDAGVGRRNRDP---AEPGSLRPTSLGFPARAGQGRVQGAAPGRKLR 136
+R P + GR + +N P + PG T+ P GQ ++ +A R
Sbjct: 89 NPASRPPAS--GRGERAPPAKNTSPGPVSSPGRASGTTR--PGPLGQKGLRISAEETVAR 144
Query: 137 GEPKTPPGRSGPSGGVR------------SGAGHRAAAAEHQLG---------------- 168
G+ P RS S G R R+ AA ++G
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEG 204
Query: 169 -------AGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPP 221
A P P AR P+ G L RPA P + P PS + P
Sbjct: 205 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 264
Query: 222 LPLCRSRWVLAPPPPVRPR-LRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTEL 280
P A P +P+ L+ L PP P R P+ + L +
Sbjct: 265 AP--------AHPSQPKPKGLQALRPPQ----VTPPRKDAAPA---------LGPLSSSP 303
Query: 281 TLTPSSRRAHGSHALSSERQAAPTRA-FCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLL 339
TPS + A P A + PL P P PS Q + P
Sbjct: 304 LATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSP--- 360
Query: 340 RAALARGAPRGRTPSPRPGPAPALQPYALTRFPASLSLPDL 380
A AP T P P P+LQ + P SL+ P L
Sbjct: 361 PATPPSQAPPSMTTPPMQAP-PSLQTIPPIQVPHSLTSPSL 400
Score = 50.8 bits (120), Expect = 2e-06
Identities = 64/218 (29%), Positives = 79/218 (36%), Gaps = 54/218 (24%)
Query: 177 PGPPARLP------PAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWV 230
P PPA P P+ P+ A PP P+ PP P ++PP P +
Sbjct: 801 PSPPASFPGQAPFSPSASLPMSPLATPP------PQAPPVLAAPLLQVPPSPPASPTLQA 854
Query: 231 LAPPPPVRPRLRVLTPPLALRCA--LPERGSRTPSTRSAVLSG-RVAGLGTELTLTPSSR 287
PP P V P L L A P SR+P S+ LSG +AG + T TP
Sbjct: 855 PRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP---SSTLSGPDLAGHSSSATSTPEEL 911
Query: 288 RAHGS-------------------HALSSERQAAPTRAFCSAD--PLPRPPSFVPSLPSP 326
R + S H + R AP AF A PLP PP+ P
Sbjct: 912 RGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG---- 967
Query: 327 QAQGQAVRQPRLLRAALARGAPRGRTPSP---RPGPAP 361
A G L P TP+P PGP+P
Sbjct: 968 SADG--------LCTIYETEGPESATPAPGALDPGPSP 997
Score = 48.9 bits (115), Expect = 8e-06
Identities = 86/330 (26%), Positives = 108/330 (32%), Gaps = 25/330 (7%)
Query: 70 PGAPGGQQLRKSRAR-----LPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPAR---- 120
PG P R+SRA LPR R S T+ PA
Sbjct: 169 PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP 228
Query: 121 -AGQGRVQGAAPGRKLRGEPKTPPGRSGPSG-GVRSGAGHRAAAAEHQLGAGFSVRNGPG 178
AG G + A+ P + P RSGPS G H + L A +R
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA---LRPPQV 285
Query: 179 PPARLPPAPP-GPLLR-PARPPRPYFP--RPRTPP--TCEPPSRKLPPPLPLCRSRWVLA 232
P R AP GPL P P P RP PP P LPP PL +
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAP 345
Query: 233 PPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGS 292
P P P L+ L P A + TP ++ + + +LT S +A S
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPS 405
Query: 293 HALSSERQA-----APTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGA 347
S QA +PT + P SL SP L+A L+ A
Sbjct: 406 PLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPA 465
Query: 348 PRGRTPSPRPGPAPALQPYALTRFPASLSL 377
S P +P P + A SL
Sbjct: 466 SPPLQTSLSPAVSPLSSPLTIHPLQALSSL 495
Score = 44.7 bits (104), Expect = 2e-04
Identities = 62/209 (29%), Positives = 75/209 (35%), Gaps = 42/209 (20%)
Query: 179 PPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVR 238
PPA L P L A PP P T P E P P P PL L PPP
Sbjct: 526 PPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETP--PCPAPCPLQAPPSPLTTPPPET 583
Query: 239 PRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSE 298
P + TPP P A+ S + GL + L+P + +
Sbjct: 584 PS-SIATPP--------------PQAPPALASPPLQGLPSP-PLSPLA---------TPP 618
Query: 299 RQAAPTRAFCSADPLPRPPSFVP----SLPSPQAQGQAVRQPRLLRAALARGAPRGRTPS 354
QA P A P PP+ P + PSPQA P L L + AP PS
Sbjct: 619 PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQA-------PNALAVHLLQ-APFSPPPS 670
Query: 355 P---RPGPAPALQPYALTRFPASLSLPDL 380
P P PA P + + P S + P L
Sbjct: 671 PPVQAPFSPPASPPVSPSATPPSQAPPSL 699
Score = 44.7 bits (104), Expect = 2e-04
Identities = 66/218 (30%), Positives = 80/218 (36%), Gaps = 26/218 (11%)
Query: 177 PGPPARLP-PAPPGPLLRPA--RPPRPYFPRPRTPPT-CEPPSRKLPPPLPLCRSRWVLA 232
P PA P APP PL P P P P+ PP PP + LP P PL LA
Sbjct: 561 PPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSP-PLS----PLA 615
Query: 233 PPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVA-GLGTELTLTPSSRRAHG 291
PPP P L PPL A P + P + A S + L L P S
Sbjct: 616 TPPPQAPPXLAL-PPLQ---APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 671
Query: 292 SHALSSERQAAPTRAFCSADPLPRPPSFV-------PSLPSPQAQGQAVRQPRLLRAALA 344
A+P + + P PPS PS P+ + P LA
Sbjct: 672 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 731
Query: 345 RGAPRGRTPSPRPGPAPALQPYAL--TRFPASLSLPDL 380
AP + P P P +P + P A R P L+ P L
Sbjct: 732 --APPLQVP-PSPPASPPMSPSATPPPRVPPLLAAPPL 766
Score = 39.3 bits (90), Expect = 0.006
Identities = 64/229 (27%), Positives = 74/229 (32%), Gaps = 51/229 (22%)
Query: 177 PGPPARLPPAPPGPLLRP--------ARPPRPYFPRP-----RTPPTCEPPSRKLPPPLP 223
P P PP P + P A PP P P TPP PP LPP
Sbjct: 573 PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPP--- 629
Query: 224 LCRSRWVLAPP-PPVRPRLRVLTPP-------LALRCALPERGSRTPSTRSAVLSGRVAG 275
+ APP PP P L L P LA+ L S PS A
Sbjct: 630 ------LQAPPSPPASPPLSPLATPSPQAPNALAVH-LLQAPFSPPPSPPVQAPFSPPAS 682
Query: 276 LGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPS----PQAQGQ 331
+ TP S QA P+ A P PP+ P PS PQA
Sbjct: 683 PPVSPSATPPS-------------QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 729
Query: 332 AVRQPRLLRAALARGAPR--GRTPSPRPGPAPALQPYALTRFPASLSLP 378
P + + P TP PR P A P + P + SLP
Sbjct: 730 LAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPA-SLP 777
Score = 38.1 bits (87), Expect = 0.014
Identities = 70/245 (28%), Positives = 81/245 (33%), Gaps = 48/245 (19%)
Query: 177 PGPPARLPPAPP---GPLLRPARPPRPYFPRPRTPPTCEP------------PSRKLPPP 221
P PA PP P PL PA PP P P P S P
Sbjct: 444 PSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAP 503
Query: 222 L-----PLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGL 276
L P ++ LAPP P + TPPL PS L A L
Sbjct: 504 LSSLIMPPLETQSSLAPPSLQTPPASLTTPPL----------ENLPSLAPPPLQTASAPL 553
Query: 277 GTELTLTPSSRRAHGSHALSSERQAAPTRAFCS-ADPLPRPPSFVPSLPSPQAQGQAVRQ 335
T TP A S P S A P P+ P P+L SP QG +
Sbjct: 554 TTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAP---PALASPPLQG--LPS 608
Query: 336 PRLLRAALARGAPRGRTPSPRPGPAPALQP-YALTRFPASLSLPDLVFTS--VGSSLVIC 392
P L A TP P+ P AL P A PAS L L S ++L +
Sbjct: 609 PPLSPLA---------TPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH 659
Query: 393 LVPTP 397
L+ P
Sbjct: 660 LLQAP 664
Score = 37.7 bits (86), Expect = 0.018
Identities = 51/165 (30%), Positives = 68/165 (41%), Gaps = 29/165 (17%)
Query: 223 PLCRSRWVLAPPPPVRPR---------LRVL-------TPPLALR------CALPERGSR 260
P R+ +L P PP PR LRVL PLA R +PE R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 261 TPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFV 320
TRSA S R + + RA + S ++P RA + P P +
Sbjct: 77 AGPTRSAGTSSR--NPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 321 P-SLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPG-PAPAL 363
S A+G+A P+ R+AL+ GA R T P PG P+PA+
Sbjct: 135 RISAEETVARGKATEAPK--RSALSAGARRD-TSGPTPGTPSPAM 176
Score = 32.0 bits (71), Expect = 1.0
Identities = 52/182 (28%), Positives = 62/182 (34%), Gaps = 29/182 (15%)
Query: 33 PDRSPTPR--SRVSPGVTSLAVGPGNPTRCQRS-GVPYEGPGAPGGQQLRKSRARLPRTR 89
P R PTP + VS +LA+ PG P RS GP G S R
Sbjct: 855 PRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGY 914
Query: 90 QGREDAGVGRR---------------NRDPAEPGSLR---PTSLGFPARAGQGRVQGAAP 131
+ G +R PA P + R L +P G G G
Sbjct: 915 DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCT 974
Query: 132 GRKLRG-EPKTP-PGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG 189
+ G E TP PG P + G AA A GAG S R+ ARL P G
Sbjct: 975 IYETEGPESATPAPGALDPGPSPGTSGGKAAAGA----GAGASSRS--PKQARLGELPLG 1028
Query: 190 PL 191
L
Sbjct: 1029 AL 1030
Score = 29.3 bits (64), Expect = 6.5
Identities = 35/130 (26%), Positives = 43/130 (33%), Gaps = 10/130 (7%)
Query: 65 VPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQG 124
VP P +P Q R+ P T + P P ++L P AG
Sbjct: 842 VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHS 901
Query: 125 RVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLP 184
+ P +LRG SGP GG + A A A GP PP
Sbjct: 902 SSATSTP-EELRGYD------SGPEGGAAASPPPDAELAACHPAAW---SRGPAPPLAFR 951
Query: 185 PAPPGPLLRP 194
AP PL P
Sbjct: 952 GAPGAPLPWP 961
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 55.5 bits (132), Expect = 9e-08
Identities = 111/418 (26%), Positives = 138/418 (33%), Gaps = 121/418 (28%)
Query: 29 GALPPDRS------PTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPG-------- 74
G+ PP+R P P +P T A PG+ R + P GP PG
Sbjct: 296 GSAPPERQEQRHSLPHPYPYPAPAYT--AHPPGH--RLVPAAPPGPGPRPPGAESHGCLP 351
Query: 75 -----GQQLRKSRARLPRTRQGREDAGVGR-----RNRDPAEPGSLRPTSLGFPARAGQG 124
G LR+SR + R A +R P PG+ +S + G
Sbjct: 352 ATRPPGSDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTG-- 409
Query: 125 RVQGAAPGRKLRGEP--KTPP------GRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNG 176
++G P + G +TP GR GPS A AA L
Sbjct: 410 -LRGVEPNPGIPGADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLP------ 462
Query: 177 PGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTC-----------------EPPSRKLP 219
PGP + PP PP P L RPP P P P C E P R P
Sbjct: 463 PGPSS--PPPPPCPRL--LRPPPP--PAWLKGPACRAAREDGEILEELFFGTEGPPRPAP 516
Query: 220 PPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTE 279
PPLP L PP A R ++ + S TP T
Sbjct: 517 PPLP--HREGFLGPP--------------ASRFSVGTQDSHTPPTPPT------------ 548
Query: 280 LTLTPSSRRAHGSHALSSERQAA---PTRAFCSADPLPRPPS----------------FV 320
T SS GSH+ S + P S DPLPRPPS
Sbjct: 549 -PTTSSSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLTLALP 607
Query: 321 PSLPSP--QAQGQAVRQPRLLRAALARGAPRGRTPSPRPGP---APALQPYALTRFPA 373
P+ PS Q + R+P R ++ P P PGP AP P + PA
Sbjct: 608 PAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPPPGPLSKAPQPVPPGVGELPA 665
Score = 44.3 bits (103), Expect = 2e-04
Identities = 74/290 (25%), Positives = 92/290 (31%), Gaps = 45/290 (15%)
Query: 58 TRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGF 117
TRC S + Y G A G ++ RL + + G + P L
Sbjct: 127 TRCYHSALRYGGSFAELGPRI----GRLQQAQLWNFHTGSCQHRAKVLPPLEQVWNLLHL 182
Query: 118 PARAGQGRVQGAAPGRKLRG----EPKTPPGRSGPSG--GVRSGAGHRAAAAEHQLGAGF 171
+ G +G P ++ +P P SGPSG G+ G R Q G
Sbjct: 183 EHKRNYGAKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLPP 242
Query: 172 SVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCE---------------PPSR 216
+ P PP LPP PP P PP P P T P + P R
Sbjct: 243 GL---PLPPPPLPPPPP-----PPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPER 294
Query: 217 KLPPPLPLCRSRWVLAPPPPVRPRLRVLTPP--LALRCALPERGSRTPSTRSAVLSGRVA 274
K P R L P P PP + A P G R P S
Sbjct: 295 KGSAPPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPGAESHGCLPATR 354
Query: 275 GLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLP 324
G++L R S SS AA T +P PS P LP
Sbjct: 355 PPGSDL----RESRVQRSRMDSSVSPAATTAC------VPYAPSRPPGLP 394
Score = 38.1 bits (87), Expect = 0.014
Identities = 74/333 (22%), Positives = 108/333 (32%), Gaps = 64/333 (19%)
Query: 86 PRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTP--- 142
P ++ G + PA P S P + AR+ + +P + + P P
Sbjct: 547 PTPTTSSSNSNSGSHSSSPAGPVSFPPPP--YLARSIDPLPRPPSPAQNPQDPPLVPLTL 604
Query: 143 ---PGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPP----ARLP-PAPPGPLLRP 194
P SG+ R + ++ + GPGPP ++ P P PPG P
Sbjct: 605 ALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPPPGPLSKAPQPVPPGVGELP 664
Query: 195 ARPPRPY-FPRPRTPPTCEPPSRKLPPPLPLCRSRWVL-----------------APPPP 236
AR PR + FP E P+ P L +L AP PP
Sbjct: 665 ARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKEEEQQQHEAGVAPQPP 724
Query: 237 VRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALS 296
++ L P P+ + + + T T T ++ +
Sbjct: 725 LKEPFASLQSPF-------------PTDTAPTTTAPAVAVTTTTTTTTTT-------TAT 764
Query: 297 SERQAAPTRAFCSADPLPR-PPSFVPSLPSPQAQGQAVRQPRLLRAALARGAP-----RG 350
E + P A PL + PP P P P A L A++ G G
Sbjct: 765 QEEEKKPPPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSL--ASVLEGQKYCYRGTG 822
Query: 351 RTPSPRPGPAPALQ-----PYALTRFPASLSLP 378
S RPGP P Q P T P + + P
Sbjct: 823 AAVSTRPGPLPTTQYSPGPPSGATALPPTSAAP 855
Score = 35.0 bits (79), Expect = 0.12
Identities = 86/392 (21%), Positives = 120/392 (30%), Gaps = 98/392 (25%)
Query: 23 YTFEVLGALPPDRSPTPRSRVSPGVT-SLAVGPGNPTRC-QRSGVPYEGPGAPGGQQLRK 80
Y + LP SP + P V +LA+ P P+ C Q + + P +P +
Sbjct: 576 YLARSIDPLPRPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESP------R 629
Query: 81 SRARLPRTRQGREDAGVGRRNR--DPAEPG-----SLRPTSLGFPARAGQGRVQGAAPGR 133
R P+T + G ++ P PG + P FP + + + A +
Sbjct: 630 PRVSFPKTPEVGPGPPPGPLSKAPQPVPPGVGELPARGPRLFDFPPTPLEDQFEEPAEFK 689
Query: 134 KLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLR 193
L P G + + +H+ G AP PL
Sbjct: 690 IL------PDGLANIMKMLDESIRKEEEQQQHEAGV----------------APQPPLKE 727
Query: 194 PARPPRPYFPRPRTPPTCEP-----------------------PSRKLPPPLPLCRSRWV 230
P + FP P T P P LPPP PL +
Sbjct: 728 PFASLQSPFPTDTAPTTTAPAVAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKF--- 784
Query: 231 LAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAH 290
PPP +P+ P P S S S + + GT
Sbjct: 785 ---PPPSQPQPPPPPP--------PSPASLLKSLASVLEGQKYCYRGT------------ 821
Query: 291 GSHALSSERQAAPTRAFCSADPLPRPPSFVPSLP----SPQAQGQAVRQPRLLRAALARG 346
A+S+ PT + P PPS +LP +P AQG G
Sbjct: 822 -GAAVSTRPGPLPTTQYS-----PGPPSGATALPPTSAAPSAQGSPQPSASSSSQFSTSG 875
Query: 347 APRGRTPSPRPGPAPALQPYALTRFPASLSLP 378
P R R G P P T+ P LSLP
Sbjct: 876 GPWAR--ERRAGEEPVPGPMTPTQPPPPLSLP 905
Score = 34.3 bits (77), Expect = 0.20
Identities = 68/259 (26%), Positives = 91/259 (35%), Gaps = 58/259 (22%)
Query: 168 GAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPR--TPPTCEPPSRKLPPPLPLC 225
GA S R GP P + P PP A PP P + P+ S+ P
Sbjct: 822 GAAVSTRPGPLPTTQYSPGPPSG--ATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWA 879
Query: 226 RSRW-----VLAPPPPVRPRLRVLTPPLALRCALPERGSRTPST------RSA------V 268
R R V P P +P + PP + E SR T RSA V
Sbjct: 880 RERRAGEEPVPGPMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGRSATDPADPV 939
Query: 269 LSGRVAGLGTELTLTPSSRR--AHGSHALSS---------ERQAAPTRAFCSADPLPRP- 316
+ A GTE L P+ + A G A+S +++ R C RP
Sbjct: 940 DTAEPADSGTERLLPPAQAKEEAGGVAAVSGSCKRRQKEHQKEHRRHRRACKDSVGRRPR 999
Query: 317 ------PSFVP-----------SLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGP 359
+ VP L S + QG+ +P L A+ A+ P+P P
Sbjct: 1000 EGRAKAKAKVPKEKSRRVLGNLDLQSEEIQGREKSRPDLGGASKAKPP---TAPAPPSAP 1056
Query: 360 APALQPYALTRFPASLSLP 378
AP+ QP P S S+P
Sbjct: 1057 APSAQP-----TPPSASVP 1070
Score = 30.8 bits (68), Expect = 2.2
Identities = 35/133 (26%), Positives = 43/133 (32%), Gaps = 22/133 (16%)
Query: 249 ALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFC 308
A R P + + P V ++G E L+P +R G + SE+ P
Sbjct: 190 AKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCN---SEQTGLPPGLPL 246
Query: 309 SADPLPRPPSFVPSLPSP-------------------QAQGQAVRQPRLLRAALARGAPR 349
PLP PP P P P G A R A R R
Sbjct: 247 PPPPLPPPPPPPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQEQR 306
Query: 350 GRTPSPRPGPAPA 362
P P P PAPA
Sbjct: 307 HSLPHPYPYPAPA 319
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 55.5 bits (132), Expect = 9e-08
Identities = 64/220 (29%), Positives = 79/220 (35%), Gaps = 48/220 (21%)
Query: 174 RNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCR--SRWVL 231
+ G PP +PP+PP P+ A P P P P P P + PPP+P RW++
Sbjct: 668 QQGSAPPTPVPPSPPQPVTLGA-VPAPQAP-PPPPKALYPGALGRPPPMPPMNFDPRWMM 725
Query: 232 APPPPVRPRLRVLTPPLALRCALPERGSRTPSTRS---------------AVLSGR---- 272
PP V PRL PPL P RS A+L R
Sbjct: 726 I-PPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAMLRERGTPP 784
Query: 273 ----VAGLGTELTLTPSSRRAHGSHALSSERQAA---PTRAFCSADPLPRPPSFVPSLPS 325
+A +G T TP+ R S RQAA P+P PP ++ S P
Sbjct: 785 VDPKLAWVGDVFTATPAEPRP----LTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPG 840
Query: 326 PQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQP 365
G A G P R P PGP P P
Sbjct: 841 FPENG-------------APGPPISRFPLEEPGPRPLPWP 867
Score = 44.7 bits (104), Expect = 2e-04
Identities = 97/407 (23%), Positives = 123/407 (30%), Gaps = 111/407 (27%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGA------PGGQQLRKSRARL 85
PP P P PG PG P S P E PG PG ++ K +
Sbjct: 826 PPVPPPPPYLASYPGFPENGA-PGPPI----SRFPLEEPGPRPLPWPPGSDEVAKIQTPP 880
Query: 86 PRTRQGREDA--------------GVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAP 131
P+ +E+ GVG + P P T + R G R +G P
Sbjct: 881 PKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSR-RGIPP 939
Query: 132 GRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPL 191
EP PP R+GP P PP ++ PP PL
Sbjct: 940 E-----EPGAPPRRAGPI-------------------------KKPPPPTKVEELPPKPL 969
Query: 192 LRPARPPRPYFPRPRT-------PPTCEPPSRKLPPPLPLCRS-RWVLAPPPPVRPRLR- 242
+ P+P P P P PP+ L P L R + P R R R
Sbjct: 970 EQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYERVGPTSCRGRGRG 1029
Query: 243 -VLTPPLALRCALPERG---------------------------SRTPSTRSAVLSGRVA 274
R RG + P+ R S
Sbjct: 1030 EYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPAPRGRTAS-ETR 1088
Query: 275 GLGTELTLTPSSRRAHGSH----------ALSSERQAAPTRAFCSADPLPRPPSFVPSLP 324
G+E P RR GS A S + P + PL PP P P
Sbjct: 1089 SEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPSP 1148
Query: 325 SP---QAQGQAVRQPRLLRAALARGAPRGRTPSPRPG---PAPALQP 365
+P A+G V PR + + RG R P PG PA +L P
Sbjct: 1149 APARFTARGGRVFTPRGVPSRRGRGGGR-PPPQVCPGWSPPAKSLAP 1194
Score = 39.3 bits (90), Expect = 0.006
Identities = 86/369 (23%), Positives = 123/369 (33%), Gaps = 77/369 (20%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPG--GQQLRKSRARLPRT- 88
PP+ + +P R+ + VGP + R G G G G + R +R+R R+
Sbjct: 998 PPNGNLSPAPRLRRDYSYERVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSY 1057
Query: 89 RQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGP 148
R+ R D G G P P PA G+ + + G + PK R
Sbjct: 1058 REFRGDDGRGGGTGGPNHP----------PAPRGRTASETRSEGSEYEEIPKRRRQRGSE 1107
Query: 149 SGGVRSGAGHRAAAAEHQLGAGFSVRNGP-GPPARLPPAPPGPLLRPARPPRPYFPR--- 204
+G + + E ++ P PP P P P AR R + PR
Sbjct: 1108 TGSETHESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVP 1167
Query: 205 -----------PRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCA 253
P+ P PP++ L P P P PP + L+ P
Sbjct: 1168 SRRGRGGGRPPPQVCPGWSPPAKSLAPKKP------PTGPLPPSKEPLKEKLIP------ 1215
Query: 254 LPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPL 313
G +P R G + +G E P RR HG A
Sbjct: 1216 ----GPLSPVARGGSNGG--SNVGMEDGERP-RRRRHG-----------------RAQQQ 1251
Query: 314 PRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRPGPAPALQPYALTRFP- 372
+PP F + ++Q R A + G P P+ PGP AL + P
Sbjct: 1252 DKPPRF-----------RRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPR 1300
Query: 373 -ASLSLPDL 380
A+ PDL
Sbjct: 1301 RAAAKSPDL 1309
Score = 35.8 bits (81), Expect = 0.070
Identities = 38/151 (25%), Positives = 51/151 (33%), Gaps = 54/151 (35%)
Query: 99 RRNRDPAEPGSLRPTSLGFPARAGQGRVQGAA-----------------------PGRKL 135
R +++ P L P ++G P G G V G + PG +
Sbjct: 1335 RGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGMER 1394
Query: 136 RGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPA 195
+ P G++G SG SG G G G R GPG
Sbjct: 1395 QNRRPGPGGKAGSSGS-SSGGG----------GGGPGGRTGPG----------------- 1426
Query: 196 RPPRPYFPRPRT---PPTCEPPSRKLPPPLP 223
R + +P P+ PP PP LPPP P
Sbjct: 1427 RGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
Score = 34.3 bits (77), Expect = 0.20
Identities = 90/382 (23%), Positives = 119/382 (31%), Gaps = 85/382 (22%)
Query: 29 GALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGP----GAPGGQQLRKSRAR 84
G P PTP++ + PG P P+ GP G PG R
Sbjct: 378 GNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPC 437
Query: 85 LPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQG---------------- 128
P + ++A RR + +E SL + R+Q
Sbjct: 438 KPPAPEDEDEAWRQRRKQSSSEI-SLAVERARRRREEEERRMQEERRAACAEKLKRLDEK 496
Query: 129 -AAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAP 187
AP ++L+ EP PP + PS A + P PPA P +
Sbjct: 497 FGAPDKRLKAEPAAPP--AAPSTPAPPPAVPKEL---------------PAPPAPPPASA 539
Query: 188 PGPLLRPARPPR-PYFPRPRTPPTCEPP---------------SRKLPPPLPLCRSRWVL 231
P P P P + P TP P S + P P S+
Sbjct: 540 PTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGP 599
Query: 232 APPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHG 291
PP V P TPP+ + +G TR G + + +L P +R
Sbjct: 600 EPPEEVPP---PTTPPVP---KVEPKGDGIGPTRQPPSQG-LGYPKYQKSLPPRFQRQQQ 652
Query: 292 SHALSSERQAA-PTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRG 350
L ++Q SA P P PPS QP L A A AP
Sbjct: 653 EQLLKQQQQHQWQQHQQGSAPPTPVPPS--------------PPQPVTLGAVPAPQAP-- 696
Query: 351 RTPSPRPGPAPALQPYALTRFP 372
P P AL P AL R P
Sbjct: 697 ------PPPPKALYPGALGRPP 712
Score = 33.9 bits (76), Expect = 0.27
Identities = 64/268 (23%), Positives = 83/268 (30%), Gaps = 38/268 (14%)
Query: 96 GVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGR---------KLRGEP--KTPPG 144
G+ R+NR P PG +S G G PGR K R P + PPG
Sbjct: 1391 GMERQNRRPG-PGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPG 1449
Query: 145 RSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG--PLLRPARPPRPYF 202
P S A R H AG + PG P +P P P
Sbjct: 1450 LPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQG 1509
Query: 203 PRPRTPPTCEP----------PSRKLPPPL-----PLCRSRWVLAPPPPVRPRLRVLTPP 247
P PR P EP P + P P+ R ++P PP R P
Sbjct: 1510 PSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPE 1569
Query: 248 LALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAF 307
L +LP P S L + G G + + A H + A +++
Sbjct: 1570 LLQEESLP------PPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSY 1623
Query: 308 CSADPLPRPPSFVPSLPSPQAQGQAVRQ 335
P P P P G + Q
Sbjct: 1624 ---RPSSMEPWMEPLSPFEDVAGTEMSQ 1648
Score = 33.5 bits (75), Expect = 0.35
Identities = 94/375 (25%), Positives = 120/375 (32%), Gaps = 89/375 (23%)
Query: 28 LGALP-PDRSPTPRSRVSPGVTSLA--VGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRAR 84
LGA+P P P P + PG + P N PY P +L + R
Sbjct: 687 LGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDP------RLLQGRPP 740
Query: 85 LPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAP--------GRKLR 136
L G +G+ R R + S P PA R +G P G
Sbjct: 741 LDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAML---RERGTPPVDPKLAWVGDVFT 797
Query: 137 GEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARL------------- 183
P P + P R AA E G P PP L
Sbjct: 798 ATPAEPRPLTSPL---------RQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPG 848
Query: 184 PPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRV 243
PP PL P P P+ P + P K PP + + P +P V
Sbjct: 849 PPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKE--ETAQLTGPEAGRKPARGV 906
Query: 244 LT-----PPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSE 298
+ PP P R SRT TR G SSRR + E
Sbjct: 907 GSGGQGPPP-------PRRESRT-ETRWGPRPG-------------SSRR-----GIPPE 940
Query: 299 RQAAPTRAFCSADPL--PRPPSFVPSL-PSPQAQGQAVRQP------RLLRAALARGAPR 349
AP R A P+ P PP+ V L P P QG +P ++ + L G P+
Sbjct: 941 EPGAPPR---RAGPIKKPPPPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKL--GGPK 995
Query: 350 GRTPSPRPGPAPALQ 364
P+ PAP L+
Sbjct: 996 ETPPNGNLSPAPRLR 1010
Score = 32.3 bits (72), Expect = 0.77
Identities = 61/218 (27%), Positives = 72/218 (33%), Gaps = 47/218 (21%)
Query: 30 ALPPDRSPTPRSRVSPGVTSLAVGPGNP--TRCQRSGVPY-------EGPGAPGGQQL-- 78
A PP+ P P S+ +P P P T SGV G GG+
Sbjct: 103 AQPPESQPLPASQ-TPASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSL 161
Query: 79 --RKSRARLPRTRQGREDAGVGRRNRDPAE----PG-SLRP-TSLGFPARAGQGRVQGAA 130
R SR P T Q D + R+ AE PG SLRP S + G+G +
Sbjct: 162 LSRFSREEFP-TLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEG 220
Query: 131 PGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPP----- 185
P KL P G PSG + F G PP PP
Sbjct: 221 PDSKLH-HGHDPRGGLQPSGPPQ-----------------FPPYRGMMPPFMYPPYLPFP 262
Query: 186 ---APPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPP 220
P GP P FPR P PP R + P
Sbjct: 263 PPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMRLVEP 300
Score = 32.3 bits (72), Expect = 0.77
Identities = 47/205 (22%), Positives = 66/205 (32%), Gaps = 32/205 (15%)
Query: 180 PARLPPAPPGPLLRPARPPR----PYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPP 235
P PP P +RPP P P+P PP P+ PP + P
Sbjct: 381 PNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPP-----GDYPDRGGP 435
Query: 236 PVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHAL 295
P +P P A +R ++ S S + E RRA + L
Sbjct: 436 PCKP-----PAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKL 490
Query: 296 S--SERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTP 353
E+ AP + + P P PS P+P A+ + P P
Sbjct: 491 KRLDEKFGAPDKRLKAE---PAAPPAAPSTPAPPP-------------AVPKELPAPPAP 534
Query: 354 SPRPGPAPALQPYALTRFPASLSLP 378
P P P +P + P + S P
Sbjct: 535 PPASAPTPETEPEEPAQAPPAQSTP 559
Score = 31.6 bits (70), Expect = 1.3
Identities = 79/347 (22%), Positives = 107/347 (30%), Gaps = 59/347 (17%)
Query: 36 SPTPRSRVSPGVTSLAVGPGN--PTRCQ----RSGVPYEGPGAPGGQQLRKSRARLPRTR 89
+P R PG+ GP PTR + SG+ + G +R PR
Sbjct: 1492 APGGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVR-GVGGTPRDS 1550
Query: 90 QGREDAGVGRRNRDPAEPGSLRPTSLGFPARAG--QGRVQGAAPGRKLRG---------- 137
G RR R P +P L+ SL P +G + +G P + R
Sbjct: 1551 AGVSPFPPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHI 1610
Query: 138 -------------EPKTPPGRSGPSGGVRSGAGHRAAAAEH--QLGAGFSVRNGP----- 177
P + P AG + ++ L V +GP
Sbjct: 1611 WNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRS 1670
Query: 178 GPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPV 237
P L A GP RP PP EPP R PPP P R L P+
Sbjct: 1671 SPDGGLKGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRR--PPPAPHDGDRKELPREQPL 1728
Query: 238 RPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGT-----ELTLTPSSRRAHGS 292
P P R +RG+ R + G GT +L L
Sbjct: 1729 PP-----GPIGTERSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEK 1783
Query: 293 HALSSERQAAPT--------RAFCSADPLPRPPSFVPSLPSPQAQGQ 331
+S +A P A SA+P + +P P + GQ
Sbjct: 1784 ELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQ 1830
Score = 29.6 bits (65), Expect = 5.0
Identities = 48/153 (31%), Positives = 58/153 (37%), Gaps = 22/153 (14%)
Query: 141 TPPGRSGPSGGVRSGAGHRAAA---AEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARP 197
TP G SG + SGA + + QL V G PPA P PP LL
Sbjct: 1959 TPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPV---VNFGSLPPAPPPAPPPLSLLPVGPA 2015
Query: 198 PRPYFPRPRTPPTCEPPSRKLPP---PLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCAL 254
+P R PP P +R LP P P R L P L+ L L
Sbjct: 2016 LQPPSLAVRPPPA--PATRVLPSPARPFPASLGRAELHP-----VELKPFQDYQKLSSNL 2068
Query: 255 PERG-SRTPSTRSAVLSGRVAGLGTELTLTPSS 286
G SRTP T + +GL + L TPS+
Sbjct: 2069 GGPGSSRTPPTGRS-----FSGLNSRLKATPST 2096
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 55.1 bits (131), Expect = 1e-07
Identities = 93/397 (23%), Positives = 134/397 (33%), Gaps = 84/397 (21%)
Query: 40 RSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRT-RQGREDAGVG 98
R R SPG S + G + +++ ++ R A P+ +QGR +
Sbjct: 30 RGRASPGGVSTSSSDGKAEKSRQTA-----------KKARVEEASTPKVNKQGRSEEISE 78
Query: 99 RRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGH 158
+ + P + T P + + GR L + + P S + +
Sbjct: 79 SESEETNAPKKTK-TEQELPRPQSPSDLD-SLDGRSLNDDGSSDPRDIDQDNRSTSPSIY 136
Query: 159 RAAAAEHQLGAGFSVRNGPG----PPARLPPAPPGPLLRPARPPRPYFPRPRTPPT---- 210
+ E+ + + GP PP PP+P P P +P + P P PT
Sbjct: 137 SPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHA 196
Query: 211 -CEPPSRKLPPPLPLCRSRWVLAPP--PPVRPRL------RVLT-PPL-------ALRCA 253
EPP+ SR APP PP P+L VL+ PP+ A
Sbjct: 197 PMEPPT-----------SRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVG 245
Query: 254 LPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADP- 312
P G + P + + G T P++ G+ A P F P
Sbjct: 246 GPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLP-----SAPPPANFPHVTPN 300
Query: 313 LPRPPSFVP------------------SLPSPQAQGQAVRQPRLLRAALARGAPRGRTPS 354
LP PP+ P LPSP A GQ + L G +G T +
Sbjct: 301 LPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGM-------GGLPPGPEKGPTLA 353
Query: 355 PRP---GPAPALQPYALTRFPASLSLPDLVFTSVGSS 388
P P PA + P RFP S S S SS
Sbjct: 354 PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSS 390
Score = 46.2 bits (108), Expect = 5e-05
Identities = 89/344 (25%), Positives = 120/344 (34%), Gaps = 48/344 (13%)
Query: 32 PPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQG 91
P SP S + L+ GP P + P P Q S R P
Sbjct: 133 PSIYSPGSVENDSDSSSGLSQGPARPY--------HPPPLFPPSPQPPDSTPRQPEASFE 184
Query: 92 REDAGVGRRNRDPAEPGSLRPTSLGFPARAG----QGRVQGAAPGRKLRGEPKTPPGRSG 147
+ P EP PTS F A G ++ G L G P P G
Sbjct: 185 PHPSVTPTGYHAPMEP----PTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGA 240
Query: 148 PS--GGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRP 205
S GG G H + S +G PP + P P G P+ PP FP
Sbjct: 241 ASSVGGPNGGKQHPPPTTP--ISVSSSGASG-APPTKPPTTPVGGGNLPSAPPPANFPHV 297
Query: 206 RTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPV--RPRLRVLTPPLALRCAL------PER 257
TP LPPP L A PP + +P L P A+ + PE+
Sbjct: 298 -TP--------NLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEK 348
Query: 258 G-SRTPSTRS---AVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPL 313
G + PS S A S + + + SS A S + SS A+P F ++ L
Sbjct: 349 GPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASP---FPASQAL 405
Query: 314 PRPPSFVPSLPSPQAQGQAVRQPRLLRAALARGAPRGRTPSPRP 357
P S+ S P P + + + P+ + +L A + P P P
Sbjct: 406 P---SYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPP 446
Score = 39.3 bits (90), Expect = 0.006
Identities = 43/159 (27%), Positives = 53/159 (33%), Gaps = 38/159 (23%)
Query: 30 ALPPDRSPTPRSRVSPGVTSLAVGPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTR 89
A PP P + SPG A PG PG+P P R
Sbjct: 631 ASPPGPPPYGKRAPSPGAYKTATPPGYK------------PGSP------------PSFR 666
Query: 90 QGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPS 149
G G PA PG+ +P S G G + A P G P PP + P+
Sbjct: 667 TGTPPGYRG--TSPPAGPGTFKPGS----PTVGPGPLPPAGPS----GLPSLPPPPAAPA 716
Query: 150 GGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPP 188
SG A + + + P PPAR P PP
Sbjct: 717 ----SGPPLSATQIKQEPAEEYETPESPVPPARSPSPPP 751
Score = 33.1 bits (74), Expect = 0.45
Identities = 62/215 (28%), Positives = 76/215 (35%), Gaps = 34/215 (15%)
Query: 33 PDRSPTPRSRVSPGVTSLAVGP-GNPTRCQR-SGVPYEGPGAPGGQQLRKSRARLPRTRQ 90
P+ P S S TS P +P+ Q G PY P P + S A L
Sbjct: 563 PNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVP---TVTTSSATLSTVIA 619
Query: 91 GREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPG-RSGPS 149
+ G + P PG P G A + PG K P +PP R+G
Sbjct: 620 TVASSPAGYKTASP--PG---PPPYGKRAPSPGAYKTATPPGYK----PGSPPSFRTGTP 670
Query: 150 GGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPP 209
G R G A + G S GPGP P GP P+ PP P P P
Sbjct: 671 PGYR-GTSPPAGPGTFKPG---SPTVGPGPLP-----PAGPSGLPSLPPPPAAPASGPPL 721
Query: 210 TC-----EPPSRKLPP--PLPLCRSRWVLAPPPPV 237
+ EP P P+P RS +PPP V
Sbjct: 722 SATQIKQEPAEEYETPESPVPPARSP---SPPPKV 753
Score = 30.4 bits (67), Expect = 2.9
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Query: 169 AGFSVRNGPGPPARLPPAPPGPLLRPARPP--RPYFP---RPRTPP------------TC 211
AG+ + PGPP AP + A PP +P P R TPP T
Sbjct: 626 AGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTF 685
Query: 212 EPPSRKL-PPPLPLCRSRWVLAPPPPVRPRLRVLTPPLA 249
+P S + P PLP + + PPP P PPL+
Sbjct: 686 KPGSPTVGPGPLPPAGPSGLPSLPPP--PAAPASGPPLS 722
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,544,289
Number of Sequences: 37866
Number of extensions: 1981867
Number of successful extensions: 28594
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 2043
Number of HSP's that attempted gapping in prelim test: 12721
Number of HSP's gapped (non-prelim): 10309
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.