| Name: LOC100288341 | Sequence: fasta or formatted (393aa) | NCBI GI: 239745467 | |
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Description: PREDICTED: hypothetical protein XP_002343499
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.2 40 2 C cysteine 1.0 4 1 D aspartate 5.9 23 2 E glutamate 4.6 18 1 F phenylalanine 2.0 8 1 G glycine 10.2 40 2 H histidine 5.9 23 2 I isoleucine 1.3 5 1 K lysine 2.0 8 1 L leucine 13.5 53 5 M methionine 1.3 5 1 N asparagine 2.0 8 1 P proline 6.1 24 2 Q glutamine 7.1 28 3 R arginine 5.9 23 1 S serine 5.6 22 2 T threonine 5.9 23 2 V valine 7.9 31 2 W tryptophan 1.3 5 1 Y tyrosine 0.5 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343499 LOC100289691 0.906 PREDICTED: hypothetical protein XP_002347688 LOC100288546 0.906 PREDICTED: hypothetical protein XP_002343503 LOC100291827 0.534 PREDICTED: hypothetical protein XP_002344924 RBMXL2 0.018 testes-specific heterogenous nuclear ribonucleoprot... ZNF469 0.014 zinc finger protein 469 MAN1C1 0.013 mannosidase, alpha, class 1C, member 1 LOC100293107 0.012 PREDICTED: hypothetical protein LOC100290679 0.012 PREDICTED: hypothetical protein XP_002347834 LOC100288571 0.012 PREDICTED: hypothetical protein XP_002343612 TCF20 0.010 transcription factor 20 isoform 2 TCF20 0.010 transcription factor 20 isoform 1 APBA2 0.009 amyloid beta A4 precursor protein-binding, family A... APBA2 0.009 amyloid beta A4 precursor protein-binding, family A,... ADSSL1 0.009 adenylosuccinate synthase like 1 isoform 1 COL16A1 0.009 alpha 1 type XVI collagen precursor FHOD1 0.009 formin homology 2 domain containing 1 MADCAM1 0.009 mucosal vascular addressin cell adhesion molecule 1... LOC100293404 0.009 PREDICTED: hypothetical protein LOC100291131 0.009 PREDICTED: hypothetical protein XP_002346641 SRRM2 0.009 splicing coactivator subunit SRm300 WIPF3 0.008 WAS/WASL interacting protein family, member 3 [Homo... LOC100289408 0.008 PREDICTED: hypothetical protein LOC100289408 0.008 PREDICTED: hypothetical protein XP_002344217 COL7A1 0.008 alpha 1 type VII collagen precursor HRNR 0.006 hornerin LOC100294444 0.006 PREDICTED: similar to family with sequence similari... ALX4 0.006 aristaless-like homeobox 4 BRSK1 0.006 BR serine/threonine kinase 1 FAM48B2 0.006 family with sequence similarity 48, member B2 [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
