Guide to the Human Genome
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Name: ADSSL1 Sequence: fasta or formatted (500aa) NCBI GI: 40316944
Description:

adenylosuccinate synthase like 1 isoform 1

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [457aa] adenylosuccinate synthase like 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         34           2
 C cysteine            1.4          7           1
 D aspartate           3.8         19           1
 E glutamate           5.6         28           2
 F phenylalanine       3.6         18           1
 G glycine            12.0         60           3
 H histidine           3.2         16           1
 I isoleucine          4.8         24           2
 K lysine              5.2         26           2
 L leucine             9.4         47           2
 M methionine          1.6          8           1
 N asparagine          3.6         18           2
 P proline             5.6         28           2
 Q glutamine           4.2         21           1
 R arginine            6.2         31           2
 S serine              5.2         26           3
 T threonine           6.4         32           2
 V valine              7.4         37           3
 W tryptophan          1.6          8           1
 Y tyrosine            2.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenylosuccinate synthase like 1 isoform 1 
ADSSL1                0.778   adenylosuccinate synthase like 1 isoform 2 
ADSS                  0.627   adenylosuccinate synthase 
C14orf4               0.012   chromosome 14 open reading frame 4 
IKIP                  0.012   IKK interacting protein isoform 2 
LOC100293471          0.010   PREDICTED: hypothetical protein 
LOC100287524          0.010   PREDICTED: hypothetical protein XP_002342307 
LOC100288644          0.009   PREDICTED: hypothetical protein XP_002342521 
LOC100292727          0.008   PREDICTED: hypothetical protein 
LOC100131774          0.008   PREDICTED: hypothetical protein 
LOC100131774          0.008   PREDICTED: hypothetical protein 
LOC100131774          0.008   PREDICTED: hypothetical protein 
LOC100290403          0.008   PREDICTED: hypothetical protein XP_002346677 
ARHGEF12              0.008   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
LOC100291827          0.007   PREDICTED: hypothetical protein XP_002344924 
LOC100289691          0.007   PREDICTED: hypothetical protein XP_002347688 
LOC100288546          0.007   PREDICTED: hypothetical protein XP_002343503 
LOC100288341          0.007   PREDICTED: hypothetical protein XP_002343499 
OCA2                  0.007   oculocutaneous albinism II 
LOC100292745          0.006   PREDICTED: hypothetical protein 
LOC100290074          0.006   PREDICTED: hypothetical protein XP_002346855 
LOC100287034          0.006   PREDICTED: hypothetical protein XP_002342693 
TUBGCP4               0.006   tubulin, gamma complex associated protein 4 
HCN4                  0.005   hyperpolarization activated cyclic nucleotide-gated p...
LOC100288243          0.005   PREDICTED: hypothetical protein 
LOC100288360          0.005   PREDICTED: hypothetical protein XP_002342802 
LOC100288243          0.005   PREDICTED: hypothetical protein XP_002342233 
LOC100288360          0.005   PREDICTED: similar to Putative uncharacterized prot...
JPH4                  0.005   junctophilin 4 
JPH4                  0.005   junctophilin 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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