Search of human proteins with 239745005

Search of human proteins with 239745005

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745005 PREDICTED: hypothetical protein XP_002343329 [Homo
sapiens]
         (86 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756146 PREDICTED: hypothetical protein XP_002344838 [Homo ...   179   4e-46
gi|239750697 PREDICTED: hypothetical protein [Homo sapiens]           179   4e-46
gi|239745005 PREDICTED: hypothetical protein XP_002343329 [Homo ...   179   4e-46
gi|239754892 PREDICTED: hypothetical protein [Homo sapiens]            32   0.083
gi|239749431 PREDICTED: hypothetical protein XP_002347034 [Homo ...    32   0.083
gi|239743565 PREDICTED: hypothetical protein XP_002342886 [Homo ...    32   0.083
gi|61699226 pulmonary surfactant-associated protein D precursor ...    30   0.53 
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      29   0.91 
gi|239755899 PREDICTED: hypothetical protein [Homo sapiens]            29   0.91 
gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo ...    29   0.91 
gi|163965441 hypothetical protein LOC149499 [Homo sapiens]             29   0.91 
gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]            28   1.2  
gi|189571667 zinc finger protein 696 [Homo sapiens]                    28   1.2  
gi|30039694 zinc finger protein 598 [Homo sapiens]                     28   1.2  
gi|19923191 minichromosome maintenance complex component 3 assoc...    28   1.6  
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      28   2.0  
gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]    28   2.0  
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]     28   2.0  
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     27   2.7  
gi|8922149 downstream neighbor of SON [Homo sapiens]                   27   2.7  
gi|4502399 filensin isoform 1 [Homo sapiens]                           27   3.5  
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]      27   3.5  
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]      27   3.5  
gi|169177615 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|169179060 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|169181042 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          27   3.5  
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho...    27   3.5  
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho...    27   3.5  
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho...    27   3.5  

>gi|239756146 PREDICTED: hypothetical protein XP_002344838 [Homo
          sapiens]
          Length = 86

 Score =  179 bits (454), Expect = 4e-46
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE 60
          MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE
Sbjct: 1  MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE 60

Query: 61 SWRGHGESAGVLPATAEPSAQAPGFA 86
          SWRGHGESAGVLPATAEPSAQAPGFA
Sbjct: 61 SWRGHGESAGVLPATAEPSAQAPGFA 86


>gi|239750697 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 86

 Score =  179 bits (454), Expect = 4e-46
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE 60
          MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE
Sbjct: 1  MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE 60

Query: 61 SWRGHGESAGVLPATAEPSAQAPGFA 86
          SWRGHGESAGVLPATAEPSAQAPGFA
Sbjct: 61 SWRGHGESAGVLPATAEPSAQAPGFA 86


>gi|239745005 PREDICTED: hypothetical protein XP_002343329 [Homo
          sapiens]
          Length = 86

 Score =  179 bits (454), Expect = 4e-46
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE 60
          MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE
Sbjct: 1  MVTVSILTHLFIPGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSE 60

Query: 61 SWRGHGESAGVLPATAEPSAQAPGFA 86
          SWRGHGESAGVLPATAEPSAQAPGFA
Sbjct: 61 SWRGHGESAGVLPATAEPSAQAPGFA 86


>gi|239754892 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 84

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 21 EEMRRREESSRAGP-------PEELGHVGLLWALGARGC 52
          E  R R +S++AGP       PEE G  GL+   GARGC
Sbjct: 2  EGRRGRAQSAQAGPAAACRGGPEEPGRAGLVAGWGARGC 40


>gi|239749431 PREDICTED: hypothetical protein XP_002347034 [Homo
          sapiens]
          Length = 84

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 21 EEMRRREESSRAGP-------PEELGHVGLLWALGARGC 52
          E  R R +S++AGP       PEE G  GL+   GARGC
Sbjct: 2  EGRRGRAQSAQAGPAAACRGGPEEPGRAGLVAGWGARGC 40


>gi|239743565 PREDICTED: hypothetical protein XP_002342886 [Homo
          sapiens]
          Length = 84

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 21 EEMRRREESSRAGP-------PEELGHVGLLWALGARGC 52
          E  R R +S++AGP       PEE G  GL+   GARGC
Sbjct: 2  EGRRGRAQSAQAGPAAACRGGPEEPGRAGLVAGWGARGC 40


>gi|61699226 pulmonary surfactant-associated protein D precursor
           [Homo sapiens]
          Length = 375

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 8/60 (13%)

Query: 32  AGPPEELGHVGLLWALGARGCFIPEG----PSESW----RGHGESAGVLPATAEPSAQAP 83
           AGP  E+G  G+  + GARG   P+G    P E       G   SAG +     P A+ P
Sbjct: 141 AGPKGEVGAPGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGP 200


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 32  AGPPEELGHVGLLWALGARGCFIPEGPSESWRGHGESAGVLPATAEPSAQAPG 84
           AGPP  +G+VG   A GARG     GP  +    G +  V P     +A  PG
Sbjct: 847 AGPPGPIGNVGAPGAKGARG---SAGPPGATGFPGAAGRVGPPGPSGNAGPPG 896



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 33  GPPEELGHVGLLWALGARGCFIPEGP--SESWRG-HGESAGVLPATAEPSAQAPG 84
           GP    G  G   A+GA+G   P+GP  SE  +G  GE     PA A   A  PG
Sbjct: 335 GPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPG 389


>gi|239755899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 459

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 29  SSRAGPPEEL---GHVGLLWALGARGCFIP 55
           SSRA  P +L      GLLWAL  R C +P
Sbjct: 222 SSRAPAPSKLTGGSLAGLLWALAGRACSLP 251


>gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo
           sapiens]
          Length = 459

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 29  SSRAGPPEEL---GHVGLLWALGARGCFIP 55
           SSRA  P +L      GLLWAL  R C +P
Sbjct: 222 SSRAPAPSKLTGGSLAGLLWALAGRACSLP 251


>gi|163965441 hypothetical protein LOC149499 [Homo sapiens]
          Length = 559

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 7   LTHLFIPGMSKTREEEMR-RREESSRAGPPEELGHVGLLWALGARGCFIPEGPS 59
           +T + + G   T + +M+  + +S+  GP      VGLLW   A+ CF P+ P+
Sbjct: 484 ITEVGLEGFLATVQYQMQFSKAKSASKGP------VGLLWLSLAKNCFAPQCPA 531


>gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]
          Length = 341

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 25  RREESSRAGPPEELGHVGLLWALGARGCFIPEGPSESWRG-----HGESAGVLPATAEPS 79
           R     R   PE+L HV +  A G   C++P+    +W+       G++ G   A +   
Sbjct: 83  RHSRRQRLLQPEDLRHVLVDDAHGLLYCYVPKVACTNWKRVLLALSGQARGDPRAISAQE 142

Query: 80  AQAPG 84
           A APG
Sbjct: 143 AHAPG 147


>gi|189571667 zinc finger protein 696 [Homo sapiens]
          Length = 374

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 28  ESSRAGPPEELGHVGLLWALGA--RGCFIPEGPSESWRGHGESA--GVLPATAEPSAQAP 83
           E  R GPP  LG +GL     A  R    P GP  S +  G+S     +P  A P A+  
Sbjct: 58  EGHRGGPPRALGSLGLCENQEARERPGGSPRGPVTSEKTGGQSGLESDVPPNAGPGAEGG 117

Query: 84  G 84
           G
Sbjct: 118 G 118


>gi|30039694 zinc finger protein 598 [Homo sapiens]
          Length = 904

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 7/52 (13%)

Query: 19  REEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSESWRGHGESAG 70
           ++EE RR E+    G P++           ARG   P GP  S R  GE  G
Sbjct: 357 QQEEARRSEDQEEGGRPKKE-------EAAARGPEDPRGPRRSPRTQGEGPG 401


>gi|19923191 minichromosome maintenance complex component 3
           associated protein [Homo sapiens]
          Length = 1980

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 5   SILTHLFIPGMSKTREEEMRRREESSRAGPP 35
           S+L    IPG++K  E E R ++E S  G P
Sbjct: 383 SVLAPSRIPGVNKEEETESREKKEDSLRGTP 413


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 32  AGPPEELGHVGLLWALGARGCFIPEGPSESWRGHGESAGVLPATAEPSAQA-PG 84
           AG P E G  GL  A G RG   P GP E  +G     G   A   P  Q  PG
Sbjct: 677 AGAPGERGPPGLAGAPGLRGGAGPPGP-EGGKGAAGPPGPPGAAGTPGLQGMPG 729



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 13  PGMSKTREEEMRRREESSRA--GPPEELGHVGLLWALGARGCFIPEGPSESWRGHGESAG 70
           PG+S  + +  +  E+ S    GPP   G +G+    GARG   P G     RG     G
Sbjct: 917 PGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPG-MPGPRGSPGPQG 975

Query: 71  VLPATAEPSA 80
           V   + +P A
Sbjct: 976 VKGESGKPGA 985


>gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]
          Length = 1745

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 33   GPPEELGHVGLLWALGARGCFIPEGPSESWRGHGESAGVLPATAEPSA 80
            GPP E G VG + ++G  G   P GP       G + G+     +P A
Sbjct: 1154 GPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEG-TPGLPGGVGQPGA 1200


>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
          Length = 1712

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 19  REEEMRRREESSRAG------PPEELGHVGLLWALGARGCFIPEGP 58
           +EE  R R E    G      PP   GHVG +  +GA G   P GP
Sbjct: 176 KEERDRYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGP 221


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 33  GPPEELGHVGLLWALGARGCFIPEGPSESWRGHGESAGVLPA--TAEPS 79
           GPP E G  G    +G+RG   P GP     G+    GV+ A  TA PS
Sbjct: 592 GPPGESGAAGPTGPIGSRGPSGPPGPD----GNKGEPGVVGAVGTAGPS 636


>gi|8922149 downstream neighbor of SON [Homo sapiens]
          Length = 566

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 11 FIPGMSKTREE-EMRRREESSR---AGPPEELGHVGLLWALGARGCFIPEGPSESWRGHG 66
          + PG  K  E   +RR+   SR   A PP EL       A    G  +   P+   RG G
Sbjct: 8  YSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGG 67

Query: 67 ESAGVLPATAEPSAQ 81
             G   A   P A+
Sbjct: 68 SGGGPAAARRNPFAR 82


>gi|4502399 filensin isoform 1 [Homo sapiens]
          Length = 665

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 17 KTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGPSESWRGHGESAGVL 72
          +TR+E+    +E+SRA  PE     G  WA GA      +G  E    H + A  L
Sbjct: 9  QTRKEQYEHADEASRAAEPERPADEG--WA-GATSLAALQGLGERVAAHVQRARAL 61


>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
          Length = 1662

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 14/46 (30%)

Query: 39  GHVGLLWALGARGCFIPEGPSESWR----GHGESAGVLPATAEPSA 80
           GH   LW+           P   W     GHGE AGV+ + A+P +
Sbjct: 173 GHESYLWSC----------PHNGWLSHNCGHGEDAGVICSAAQPQS 208


>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
          Length = 1788

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 14/46 (30%)

Query: 39  GHVGLLWALGARGCFIPEGPSESWR----GHGESAGVLPATAEPSA 80
           GH   LW+           P   W     GHGE AGV+ + A+P +
Sbjct: 173 GHESYLWSC----------PHNGWLSHNCGHGEDAGVICSAAQPQS 208


>gi|169177615 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 121

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 17/78 (21%)

Query: 24 RRREESSRAGPPEELGHVGLLWALGARG----------CFIPE-------GPSESWRGHG 66
          R  + +   G PE LG +GL +  G+RG           F PE        PS+  +G G
Sbjct: 17 RGHQGAPTRGIPERLGALGLQYRRGSRGREERNHSTQTIFTPELRREGLRNPSDGAQGSG 76

Query: 67 ESAGVLPATAEPSAQAPG 84
           S  VL   +     A G
Sbjct: 77 ASKPVLLCPSPSGTGARG 94


>gi|169179060 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 121

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 17/78 (21%)

Query: 24 RRREESSRAGPPEELGHVGLLWALGARG----------CFIPE-------GPSESWRGHG 66
          R  + +   G PE LG +GL +  G+RG           F PE        PS+  +G G
Sbjct: 17 RGHQGAPTRGIPERLGALGLQYRRGSRGREERNHSTQTIFTPELRREGLRNPSDGAQGSG 76

Query: 67 ESAGVLPATAEPSAQAPG 84
           S  VL   +     A G
Sbjct: 77 ASKPVLLCPSPSGTGARG 94


>gi|169181042 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 121

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 17/78 (21%)

Query: 24 RRREESSRAGPPEELGHVGLLWALGARG----------CFIPE-------GPSESWRGHG 66
          R  + +   G PE LG +GL +  G+RG           F PE        PS+  +G G
Sbjct: 17 RGHQGAPTRGIPERLGALGLQYRRGSRGREERNHSTQTIFTPELRREGLRNPSDGAQGSG 76

Query: 67 ESAGVLPATAEPSAQAPG 84
           S  VL   +     A G
Sbjct: 77 ASKPVLLCPSPSGTGARG 94


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 9/63 (14%)

Query: 28   ESSRAGPPEELGHVGLLWALGARGCFIPEGP-----SESWRGH----GESAGVLPATAEP 78
            E    GPP   G  GL    G  G   PEGP      +  +G     G+ A V PA A P
Sbjct: 1493 EKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGP 1552

Query: 79   SAQ 81
              +
Sbjct: 1553 KGE 1555


>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
            sapiens]
          Length = 1751

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/46 (39%), Positives = 21/46 (45%)

Query: 13   PGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGP 58
            PG   T   +     ESSR GPP   G+ G     GA+G   P GP
Sbjct: 1263 PGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGP 1308


>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1336

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/46 (39%), Positives = 21/46 (45%)

Query: 13  PGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGP 58
           PG   T   +     ESSR GPP   G+ G     GA+G   P GP
Sbjct: 848 PGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGP 893


>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
            sapiens]
          Length = 1516

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/46 (39%), Positives = 21/46 (45%)

Query: 13   PGMSKTREEEMRRREESSRAGPPEELGHVGLLWALGARGCFIPEGP 58
            PG   T   +     ESSR GPP   G+ G     GA+G   P GP
Sbjct: 1028 PGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGP 1073


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,398,035
Number of Sequences: 37866
Number of extensions: 207778
Number of successful extensions: 850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 776
Number of HSP's gapped (non-prelim): 113
length of query: 86
length of database: 18,247,518
effective HSP length: 58
effective length of query: 28
effective length of database: 16,051,290
effective search space: 449436120
effective search space used: 449436120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.