Guide to the Human Genome
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Name: MCM3AP Sequence: fasta or formatted (1980aa) NCBI GI: 19923191
Description:

minichromosome maintenance complex component 3 associated protein

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2        143           4
 C cysteine            2.1         42           2
 D aspartate           4.5         90           2
 E glutamate           7.7        153           3
 F phenylalanine       4.4         88           2
 G glycine             6.0        118           3
 H histidine           2.4         48           1
 I isoleucine          2.9         58           2
 K lysine              5.1        101           2
 L leucine            10.8        214           3
 M methionine          1.8         36           2
 N asparagine          3.0         59           2
 P proline             6.6        130           4
 Q glutamine           5.3        105           2
 R arginine            5.7        113           2
 S serine             10.7        212           4
 T threonine           4.7         94           2
 V valine              6.7        133           2
 W tryptophan          1.0         19           1
 Y tyrosine            1.2         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   minichromosome maintenance complex component 3 assoc... 
SAC3D1                0.025   SAC3 domain containing 1 
FMN1                  0.007   formin 1 
LOC100130716          0.007   PREDICTED: similar to mucin 11 
LENG8                 0.007   leukocyte receptor cluster member 8 
NUP153                0.006   nucleoporin 153kDa 
NUP214                0.006   nucleoporin 214kDa 
LOC100130716          0.006   PREDICTED: similar to Mucin-12 
MAPK7                 0.006   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.006   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.006   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.006   mitogen-activated protein kinase 7 isoform 2 
FLG2                  0.006   filaggrin family member 2 
MUC17                 0.006   mucin 17 
MUC16                 0.005   mucin 16 
GGA3                  0.005   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.005   ADP-ribosylation factor binding protein 3 isoform lo...
MAP7D1                0.005   MAP7 domain containing 1 
MUC12                 0.005   PREDICTED: mucin 12 
RBM42                 0.005   RNA binding motif protein 42 
LOC100288540          0.005   PREDICTED: hypothetical protein XP_002342775 
MAP7                  0.005   microtubule-associated protein 7 
POM121C               0.005   POM121 membrane glycoprotein (rat)-like 
FMNL1                 0.005   formin-like 1 
ATN1                  0.005   atrophin-1 
ATN1                  0.005   atrophin-1 
BRD4                  0.005   bromodomain-containing protein 4 isoform long 
NUP98                 0.005   nucleoporin 98kD isoform 3 
MUC21                 0.005   mucin 21 
MUC12                 0.005   PREDICTED: mucin 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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