Guide to the Human Genome
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Name: DONSON Sequence: fasta or formatted (566aa) NCBI GI: 8922149
Description:

downstream neighbor of SON

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         43           3
 C cysteine            1.1          6           1
 D aspartate           3.7         21           1
 E glutamate           6.7         38           3
 F phenylalanine       3.9         22           1
 G glycine             6.0         34           3
 H histidine           2.3         13           1
 I isoleucine          3.5         20           1
 K lysine              5.1         29           2
 L leucine            11.8         67           2
 M methionine          2.1         12           1
 N asparagine          2.8         16           1
 P proline             8.1         46           2
 Q glutamine           4.1         23           2
 R arginine            6.4         36           2
 S serine              9.7         55           2
 T threonine           6.0         34           2
 V valine              5.5         31           2
 W tryptophan          1.6          9           1
 Y tyrosine            1.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   downstream neighbor of SON 
LOC100131102          0.018   PREDICTED: hypothetical protein 
LOC100131102          0.018   PREDICTED: hypothetical protein 
LOC100131102          0.018   PREDICTED: hypothetical protein 
SFRS1                 0.015   splicing factor, arginine/serine-rich 1 isoform 2 [...
LOC100289126          0.014   PREDICTED: hypothetical protein XP_002343381 
LOC100132234          0.014   PREDICTED: hypothetical protein LOC100132234 
LOC284988             0.014   PREDICTED: hypothetical protein 
LOC100132234          0.014   PREDICTED: hypothetical protein LOC100132234 
LOC100132234          0.014   PREDICTED: hypothetical protein LOC100132234 
YBX2                  0.014   Y box binding protein 2 
LOC389813             0.014   similar to CG15216-PA 
C10orf47              0.011   hypothetical protein LOC254427 
LOC100292048          0.011   PREDICTED: hypothetical protein XP_002344877 
SFRS1                 0.011   splicing factor, arginine/serine-rich 1 isoform 1 [Ho...
XYLT1                 0.011   xylosyltransferase I 
LOC100133885          0.011   PREDICTED: hypothetical protein 
FLJ37078              0.011   hypothetical protein LOC222183 
SALL3                 0.010   sal-like 3 
LOC730456             0.010   PREDICTED: hypothetical protein 
DACT3                 0.010   thymus expressed gene 3-like 
LOC100131455          0.009   PREDICTED: hypothetical protein 
LOC100131455          0.009   PREDICTED: hypothetical protein 
LOC100131455          0.009   PREDICTED: hypothetical protein 
MAP1S                 0.009   BPY2 interacting protein 1 
HMX2                  0.009   H6 family homeobox 2 
LOC100288573          0.009   PREDICTED: hypothetical protein XP_002343799 
MAGI2                 0.009   membrane associated guanylate kinase, WW and PDZ dom...
MNX1                  0.009   homeo box HB9 
HNRNPUL2              0.009   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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