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Search of human proteins with 239744970
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744970 PREDICTED: hypothetical protein XP_002343319 [Homo
sapiens]
(368 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744970 PREDICTED: hypothetical protein XP_002343319 [Homo ... 758 0.0
gi|169210434 PREDICTED: hypothetical protein [Homo sapiens] 42 9e-04
gi|47086495 biogenesis of lysosomal organelles complex-1, subuni... 40 0.003
gi|145275193 specifically androgen-regulated protein isoform 2 [... 40 0.003
gi|145275189 specifically androgen-regulated protein isoform 1 [... 40 0.003
gi|18079216 CASK interacting protein 1 [Homo sapiens] 39 0.007
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens] 39 0.010
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens] 39 0.010
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.013
gi|157266264 pleckstrin homology-like domain, family B, member 3... 38 0.013
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 36 0.048
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 36 0.063
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 36 0.063
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 36 0.063
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 36 0.063
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 35 0.082
gi|32528301 EPH receptor B4 precursor [Homo sapiens] 35 0.11
gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo ... 35 0.11
gi|239745511 PREDICTED: hypothetical protein XP_002343508 [Homo ... 35 0.11
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 35 0.14
gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens] 35 0.14
gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi... 35 0.14
gi|110815800 WD repeat domain 32 [Homo sapiens] 34 0.18
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 34 0.18
gi|239754415 PREDICTED: hypothetical protein XP_002345991 [Homo ... 34 0.18
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens] 34 0.18
gi|239748949 PREDICTED: hypothetical protein XP_002346841 [Homo ... 34 0.18
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ... 34 0.18
gi|239742971 PREDICTED: hypothetical protein XP_002342727 [Homo ... 34 0.18
>gi|239744970 PREDICTED: hypothetical protein XP_002343319 [Homo
sapiens]
Length = 368
Score = 758 bits (1958), Expect = 0.0
Identities = 368/368 (100%), Positives = 368/368 (100%)
Query: 1 MSADPARSKSAGPVKAPVITASTLISGSPLSAEGQRDTWHRTRAERAFLCSVAVALLLLH 60
MSADPARSKSAGPVKAPVITASTLISGSPLSAEGQRDTWHRTRAERAFLCSVAVALLLLH
Sbjct: 1 MSADPARSKSAGPVKAPVITASTLISGSPLSAEGQRDTWHRTRAERAFLCSVAVALLLLH 60
Query: 61 RTRRRLRLEGASFPTASPPPASLWQSPKAGLQVVDPIEACIPHFSSGRRTEDLFLSSAHF 120
RTRRRLRLEGASFPTASPPPASLWQSPKAGLQVVDPIEACIPHFSSGRRTEDLFLSSAHF
Sbjct: 61 RTRRRLRLEGASFPTASPPPASLWQSPKAGLQVVDPIEACIPHFSSGRRTEDLFLSSAHF 120
Query: 121 GGCSCHWALERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAEC 180
GGCSCHWALERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAEC
Sbjct: 121 GGCSCHWALERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAEC 180
Query: 181 LRGEAASMDSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVS 240
LRGEAASMDSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVS
Sbjct: 181 LRGEAASMDSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVS 240
Query: 241 GAGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPAQGRWRRPWILVRRRP 300
GAGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPAQGRWRRPWILVRRRP
Sbjct: 241 GAGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPAQGRWRRPWILVRRRP 300
Query: 301 RPCCRFSSALLASDTSCLLLRFLGSWLWFSDPNSSPARSEEGGYPTVIKVWLGDIGYSPF 360
RPCCRFSSALLASDTSCLLLRFLGSWLWFSDPNSSPARSEEGGYPTVIKVWLGDIGYSPF
Sbjct: 301 RPCCRFSSALLASDTSCLLLRFLGSWLWFSDPNSSPARSEEGGYPTVIKVWLGDIGYSPF 360
Query: 361 FTAISGCH 368
FTAISGCH
Sbjct: 361 FTAISGCH 368
>gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 301
Score = 42.0 bits (97), Expect = 9e-04
Identities = 62/237 (26%), Positives = 80/237 (33%), Gaps = 49/237 (20%)
Query: 113 LFLSSAHFGGCSCHWALERRGKLGRRCPRS-ARG-------RASSPPVQRESRASQDPDH 164
+ L+ GC W L G R P S ARG R+ S P QR RA + P
Sbjct: 8 VLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARRAGEGPAR 67
Query: 165 SAAPGAGGLVARPAECLRGEAASMDSKAR--QGRRPRP---ELRGTTQLSSPWVPRSQLP 219
+ L A A C G A ++A +GR + R Q + P
Sbjct: 68 AR------LEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRGP 121
Query: 220 GPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWRQDKAALAARCA------------- 266
P+ P L + +G G PA G A A+A RCA
Sbjct: 122 APAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWGV 181
Query: 267 ----SCPTAGVSAPCLPGPALPAQGR----------WRRPWILVRRRPRPC--CRFS 307
S S C P P P +G ++ PW L R P PC C F+
Sbjct: 182 RHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRL-RLLPPPCLHCLFA 237
>gi|47086495 biogenesis of lysosomal organelles complex-1, subunit 3
[Homo sapiens]
Length = 202
Score = 40.4 bits (93), Expect = 0.003
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 131 RRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAEC-LRGEAASMD 189
RR + RR G A+ +R + +S++ + P +G RP + GEAA D
Sbjct: 6 RRRRPLRRPETVVPGEATETDSERSASSSEEEELYLGP-SGPTRGRPTGLRVAGEAAETD 64
Query: 190 SKARQGRRPRPELRGTTQLSSPWVPR----------SQLPGPSLSRPLRSLR-AKLQARH 238
S+ P PE + P V + + P P+ +R L LR A+ QAR
Sbjct: 65 SEPE----PEPEPTAAPRDLPPLVVQRESAEEAWGTEEAPAPAPARSLLQLRLAESQAR- 119
Query: 239 VSGAGHPAAGLVPALWRQ---DKAALAARCASCPTAGVSA 275
H A V ++R+ D AALA+R A+ AG++A
Sbjct: 120 ---LDHDVAAAVSGVYRRAGRDVAALASRLAAAQAAGLAA 156
>gi|145275193 specifically androgen-regulated protein isoform 2
[Homo sapiens]
Length = 355
Score = 40.4 bits (93), Expect = 0.003
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 30/145 (20%)
Query: 150 PP--VQRESRAS--QDPDHSAAPGAGGLVARPAECLRGEAASMDSKARQGRRPRPELRGT 205
PP V + SR+S DP H ++R E G++ + ++ R+ R E
Sbjct: 56 PPNIVLKSSRSSFHSDPQH--------WLSRHTEAAPGDSGLISCSLQEQRKARKEA--- 104
Query: 206 TQLSSPWVPRSQ-LPGPSLSRPLRSLRAK-LQARHVSGAGHPAAGLVPALWRQDKAALAA 263
L +P+ Q PG LS+P S+R K +A+H+S PA GL AA A
Sbjct: 105 --LEKLGLPQDQDEPGLHLSKPTSSIRPKETRAQHLS----PAPGLA------QPAAPAQ 152
Query: 264 RCASCPTAGVSAPCLPGPAL-PAQG 287
A+ P AG + P PA PAQG
Sbjct: 153 ASAAIPAAGKALAQAPAPAPGPAQG 177
>gi|145275189 specifically androgen-regulated protein isoform 1
[Homo sapiens]
Length = 601
Score = 40.4 bits (93), Expect = 0.003
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 30/145 (20%)
Query: 150 PP--VQRESRAS--QDPDHSAAPGAGGLVARPAECLRGEAASMDSKARQGRRPRPELRGT 205
PP V + SR+S DP H ++R E G++ + ++ R+ R E
Sbjct: 302 PPNIVLKSSRSSFHSDPQH--------WLSRHTEAAPGDSGLISCSLQEQRKARKEA--- 350
Query: 206 TQLSSPWVPRSQ-LPGPSLSRPLRSLRAK-LQARHVSGAGHPAAGLVPALWRQDKAALAA 263
L +P+ Q PG LS+P S+R K +A+H+S PA GL AA A
Sbjct: 351 --LEKLGLPQDQDEPGLHLSKPTSSIRPKETRAQHLS----PAPGLA------QPAAPAQ 398
Query: 264 RCASCPTAGVSAPCLPGPAL-PAQG 287
A+ P AG + P PA PAQG
Sbjct: 399 ASAAIPAAGKALAQAPAPAPGPAQG 423
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 12/136 (8%)
Query: 150 PPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMDSKARQGRRPRPELRGTTQLS 209
PP + E+R P S P ++ +P L+G K PE++
Sbjct: 1212 PPPEGEARKPAKPPVSPKP----VLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTP 1267
Query: 210 SPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWRQDKAALAARCASCP 269
P P+ P P+ +P++++ A SG+ P+ PA RQ AALA + P
Sbjct: 1268 PPVSPKPP-PPPTAPKPVKAV-----AGLPSGSAGPSPAPSPA--RQPPAALAKPPGTPP 1319
Query: 270 TAGVSAPCLPGPALPA 285
+ G S P P PA
Sbjct: 1320 SLGASPAKPPSPGAPA 1335
>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 38.5 bits (88), Expect = 0.010
Identities = 61/194 (31%), Positives = 70/194 (36%), Gaps = 56/194 (28%)
Query: 130 ERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMD 189
ERRG L R GRAS P R S+ + +PG G A G AA
Sbjct: 115 ERRGSLQDRL-----GRASRPGCPPSPRGSRQERGANSPGRSG-----ARGCGGAAALQQ 164
Query: 190 SKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGL 249
RPRP RGT PG +L PL R Q G G A+ L
Sbjct: 165 EPTNFRGRPRPGARGTDP-----------PGRTLPAPL--ARPSTQPGRRPGLGRAASPL 211
Query: 250 VPALWRQDKAALAARCASCPTAGVSAPCLPGPALPA---QGRWRRPWILVRRRP------ 300
P AGV+ GPA +GRW R W VRRR
Sbjct: 212 GPR-----------------GAGVTG---AGPATQGGRDRGRWGR-W--VRRRVPCPLPG 248
Query: 301 -RPCCRFSSALLAS 313
RP R +ALLA+
Sbjct: 249 LRPHERAGAALLAT 262
>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 38.5 bits (88), Expect = 0.010
Identities = 61/194 (31%), Positives = 70/194 (36%), Gaps = 56/194 (28%)
Query: 130 ERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMD 189
ERRG L R GRAS P R S+ + +PG G A G AA
Sbjct: 115 ERRGSLQDRL-----GRASRPGCPPSPRGSRQERGANSPGRSG-----ARGCGGAAALQQ 164
Query: 190 SKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGL 249
RPRP RGT PG +L PL R Q G G A+ L
Sbjct: 165 EPTNFRGRPRPGARGTDP-----------PGRTLPAPL--ARPSTQPGRRPGLGRAASPL 211
Query: 250 VPALWRQDKAALAARCASCPTAGVSAPCLPGPALPA---QGRWRRPWILVRRRP------ 300
P AGV+ GPA +GRW R W VRRR
Sbjct: 212 GPR-----------------GAGVTG---AGPATQGGRDRGRWGR-W--VRRRVPCPLPG 248
Query: 301 -RPCCRFSSALLAS 313
RP R +ALLA+
Sbjct: 249 LRPHERAGAALLAT 262
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.1 bits (87), Expect = 0.013
Identities = 73/279 (26%), Positives = 90/279 (32%), Gaps = 61/279 (21%)
Query: 3 ADPARSKSAGPVKAPVITASTLISGSPLSAEGQRDTWHRTRAERAFLCSVAVALLLLHRT 62
A PA++ S GPV +P + T G PL +G R + T A + A L
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPG-PLGQKGLRISAEETVARGK--ATEAPKRSALSAG 159
Query: 63 RRRLRLEGASFPT-ASPPPASLWQSPKAGLQVVDPIEACIPHFSSGRRTEDLFLSSAHFG 121
RR S PT +P PA +S AG +V
Sbjct: 160 ARR----DTSGPTPGTPSPAMARRSRAAGTEV---------------------------- 187
Query: 122 GCSCHWALERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPA-EC 180
L R R P + R S S P P AGG + RPA
Sbjct: 188 ------GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRS 241
Query: 181 LRGEAASMDSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVS 240
L A + S AR G P RGT PR+ PS +P LQA
Sbjct: 242 LSSSATPLSSPARSG----PSARGT--------PRAP-AHPSQPKP-----KGLQALRPP 283
Query: 241 GAGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLP 279
P PAL + LA S + P LP
Sbjct: 284 QVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLP 322
>gi|157266264 pleckstrin homology-like domain, family B, member 3
[Homo sapiens]
Length = 640
Score = 38.1 bits (87), Expect = 0.013
Identities = 62/256 (24%), Positives = 89/256 (34%), Gaps = 51/256 (19%)
Query: 70 GASFPTASPPPASLWQSPKAGLQVVDPIEACIPHFSSGRRTEDLFLSSAHFGGCSCHWAL 129
G F +P L + K Q++ ++ + H ++ + LF + G L
Sbjct: 333 GGDFSEPNPALTKLLFTQKTDRQLL-VLQDAVAHSAATPTSSCLFSVHSSLQGSI---GL 388
Query: 130 ERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPA-----ECLRGE 184
+R G L R+ R RG P ++ + SA P A G R C RG
Sbjct: 389 QRTGSLPRK--RGERGSQRGSPRPLSFHCTESLEASALPPAVGDSGRYPLYQLLNCGRGN 446
Query: 185 A--------ASMDSKARQGRRPRPEL--------RGTTQLSSPWVPRSQLPGPSLSRPLR 228
+ A M+ +Q R L RGT S P VP P P+ P
Sbjct: 447 SCGAIHPDIAHMERLLQQAMAERERLLKAREGTRRGTEGSSGPAVPAITAP-PTPPHPPG 505
Query: 229 SLRAKLQARHVSGAGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPAQGR 288
L+ +H+ G GH +CP VS C GP + GR
Sbjct: 506 PRILDLR-QHLEGWGHNPE-------------------NCPHVQVSGCCCRGPLVKMGGR 545
Query: 289 ---WRRPWILVRRRPR 301
WR+ W R+ R
Sbjct: 546 IKTWRKRWFCFDRQAR 561
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 36.2 bits (82), Expect = 0.048
Identities = 49/169 (28%), Positives = 60/169 (35%), Gaps = 25/169 (14%)
Query: 136 GRRCPR-SARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASM------ 188
GRR P RG A P A P PGAG R A+S+
Sbjct: 51 GRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQ 110
Query: 189 --DSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGH-- 244
D +R+GRR P L G R +L S+SR RA+ A H + G
Sbjct: 111 VGDWTSREGRRGGPCLPGA---------RRRLFSLSVSRSSGPPRARSCAPHPAREGMAT 161
Query: 245 ---PAAGLVPALW--RQDKAALAARCASCPTAGVSAPCLPGPALPAQGR 288
P AGL + R + R + P PCL P PA R
Sbjct: 162 TRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSR 210
Score = 29.6 bits (65), Expect = 4.5
Identities = 46/167 (27%), Positives = 58/167 (34%), Gaps = 20/167 (11%)
Query: 143 ARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMDSKAR-----QGRR 197
AR R S +R +RA + + A P AGG V R A + R +GR
Sbjct: 2 ARVRGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRG 61
Query: 198 P---RPELRGTTQLSSPWVPRSQLPGPSLSR--PLRSLRAKLQAR-------HVSGAGHP 245
P P T L P P GPS R P R+ RA A S G
Sbjct: 62 PAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRR 121
Query: 246 AAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPAQGRWRRP 292
+P R+ + +R + P A C P PA R P
Sbjct: 122 GGPCLPGARRRLFSLSVSRSSGPPRA---RSCAPHPAREGMATTRGP 165
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 35.8 bits (81), Expect = 0.063
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 136 GRRCPRSARGRASSPPVQRESRASQDPD-HSAAPGAGGLVARPAECLRGEAASMDSKARQ 194
G P +ARGR + RA+ P PGA G + RP RG A + +Q
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQ 74
Query: 195 GRRPRPELRGTTQLSSPW---VPRSQLPGPSLSRP 226
RP P L +P P + +PG S SRP
Sbjct: 75 PWRPGP-------LGAPLQDRAPSAHVPG-SASRP 101
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 35.8 bits (81), Expect = 0.063
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 136 GRRCPRSARGRASSPPVQRESRASQDPD-HSAAPGAGGLVARPAECLRGEAASMDSKARQ 194
G P +ARGR + RA+ P PGA G + RP RG A + +Q
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQ 74
Query: 195 GRRPRPELRGTTQLSSPW---VPRSQLPGPSLSRP 226
RP P L +P P + +PG S SRP
Sbjct: 75 PWRPGP-------LGAPLQDRAPSAHVPG-SASRP 101
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 35.8 bits (81), Expect = 0.063
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 136 GRRCPRSARGRASSPPVQRESRASQDPD-HSAAPGAGGLVARPAECLRGEAASMDSKARQ 194
G P +ARGR + RA+ P PGA G + RP RG A + +Q
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQ 74
Query: 195 GRRPRPELRGTTQLSSPW---VPRSQLPGPSLSRP 226
RP P L +P P + +PG S SRP
Sbjct: 75 PWRPGP-------LGAPLQDRAPSAHVPG-SASRP 101
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 35.8 bits (81), Expect = 0.063
Identities = 66/254 (25%), Positives = 87/254 (34%), Gaps = 43/254 (16%)
Query: 70 GASFPTASPP------PASLWQSPKAGLQVVDPIEACIPHFSSGRRTEDLFLSSAHFGGC 123
G S P++ PP P W + GL P + P ++G R F
Sbjct: 30 GDSGPSSPPPVRPSGNPEPGWLESREGL--AHPPQGLAPPPTAGNRPHPT--RKCTFPVP 85
Query: 124 SCHWALERRGKL------GRRCP-----RSARGRASS--PPVQRESRASQDPDHSAAPGA 170
S R G++ GRRC +ARG+ +S P R DP A G
Sbjct: 86 SPELGAGREGEVAGVSACGRRCAVLGVRAAARGQLNSRTAPRDRHRGVGPDPGRETALGT 145
Query: 171 GGLVARPAECLRGEAASMDSKARQG----------RRPRPELRGTTQLSSP-WVPRS--- 216
L R + + + K R+G R P LR ++QL SP +PR+
Sbjct: 146 ATLSLRSSPTAGSVSTGLVGKQREGGNGPWRAPVFRLPGARLRLSSQLPSPTTLPRAAPL 205
Query: 217 --QLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWR--QDKAALAARCASCPTAG 272
PG R LR++ R G VPA R SC T G
Sbjct: 206 TPYRPGSPSPRGHSRLRSRPPTRAQLRVGANPLSPVPARLRGCHSVRPEGGGVRSCRTLG 265
Query: 273 VSAPCLP--GPALP 284
P P P LP
Sbjct: 266 CCPPTSPHQPPRLP 279
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 35.4 bits (80), Expect = 0.082
Identities = 51/173 (29%), Positives = 64/173 (36%), Gaps = 30/173 (17%)
Query: 135 LGRRCPRSARGRASSPPVQ---------RESRASQDPDHSAAPGAGGLVARPAECLRGE- 184
+GRR RGR P R R +Q P A GG R A G
Sbjct: 71 VGRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGGPP 130
Query: 185 ---------AASMDSKARQGRRP---RPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRA 232
A + + G RP R LR +L+S +PR P P+ R+
Sbjct: 131 RRRPPRLAAAHGLPASEAPGLRPDSARTRLR--LRLASARLPRGLPPAPAAGL-WRAGCT 187
Query: 233 KLQARHVSGAGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPA 285
+L+ + P L P L + L AR S P A APCLP PA PA
Sbjct: 188 RLRPLLLQ----PPPMLSPGLAQSPGVELHARTLSLP-APSPAPCLPPPAPPA 235
>gi|32528301 EPH receptor B4 precursor [Homo sapiens]
Length = 987
Score = 35.0 bits (79), Expect = 0.11
Identities = 64/254 (25%), Positives = 91/254 (35%), Gaps = 49/254 (19%)
Query: 50 CSVAVALLLLHRTRRRLRLEGASFPTASPPPASLWQSPKAGLQVVDPIEACIPHFSSGRR 109
C ++L L ++ +L + FP P + P AG VVD + A P S R
Sbjct: 184 CMALLSLHLFYKKCAQLTVNLTRFPETVPRELVV---PVAGSCVVDAVPAPGPSPSLYCR 240
Query: 110 TEDLFLSSAHFGGCSCHWALERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPG 169
ED + GCSC E + +C A+G + P+ E P +S +
Sbjct: 241 -EDGQWAEQPVTGCSCAPGFEA-AEGNTKCRACAQG--TFKPLSGEGSCQPCPANSHSNT 296
Query: 170 AGGLVARPAECLRGEAASMDSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRS 229
G V +C G R R + RG + P PRS + + S S
Sbjct: 297 IGSAVC---QCRVGYF-----------RARTDPRGAPCTTPPSAPRSVVSRLNGS----S 338
Query: 230 LRAKLQARHVSGAGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPC------LPGPAL 283
L + A SG ++ A RC C G APC PGP
Sbjct: 339 LHLEWSAPLESGG-------------REDLTYALRCRECRPGGSCAPCGGDLTFDPGPRD 385
Query: 284 PAQGRWRRPWILVR 297
+ PW++VR
Sbjct: 386 LVE-----PWVVVR 394
>gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo
sapiens]
Length = 427
Score = 35.0 bits (79), Expect = 0.11
Identities = 58/225 (25%), Positives = 80/225 (35%), Gaps = 51/225 (22%)
Query: 129 LERRGKLGRRCPRSARGRA-----SSPPVQRESRASQDPDHSAAP-------GAGGLVAR 176
L R G+L +ARG SSPP +R +R + A G +V R
Sbjct: 12 LRRWGRLAAGGRAAARGSVPQPVKSSPPFRRSARPTDSLASRARAWRRRRQAGCLRVVPR 71
Query: 177 PAECLRGEAASMDSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQA 236
P + R R+PRP + + P S+ P +S R +A
Sbjct: 72 PGVARAAACCACACAGRTNRQPRP-FQARLLAAVPSASNSKTPCTCMSASPRLSKA---- 126
Query: 237 RHVSGAGHPAAGLVPALWRQDKAALAARCASC-PTAGVSAPCLPGPALPAQGRWRRPWIL 295
++ ++RC S PT+G+ A L G LP R R +
Sbjct: 127 ----------------------SSSSSRCWSRGPTSGLGAT-LGGTVLPPAARTPRDGL- 162
Query: 296 VRRRPRPCCRFSSA---LLASDTSCLLLRFLGSWLWFSDPNSSPA 337
R R R R S+A L + CL SWLW P PA
Sbjct: 163 -RDRGRLLSRNSTARRSFLELPSKCLT-----SWLWVIAPRPGPA 201
>gi|239745511 PREDICTED: hypothetical protein XP_002343508 [Homo
sapiens]
Length = 427
Score = 35.0 bits (79), Expect = 0.11
Identities = 58/225 (25%), Positives = 80/225 (35%), Gaps = 51/225 (22%)
Query: 129 LERRGKLGRRCPRSARGRA-----SSPPVQRESRASQDPDHSAAP-------GAGGLVAR 176
L R G+L +ARG SSPP +R +R + A G +V R
Sbjct: 12 LRRWGRLAAGGRAAARGSVPQPVKSSPPFRRSARPTDSLASRARAWRRRRQAGCLRVVPR 71
Query: 177 PAECLRGEAASMDSKARQGRRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQA 236
P + R R+PRP + + P S+ P +S R +A
Sbjct: 72 PGVARAAACCACACAGRTNRQPRP-FQARLLAAVPSASNSKTPCTCMSASPRLSKA---- 126
Query: 237 RHVSGAGHPAAGLVPALWRQDKAALAARCASC-PTAGVSAPCLPGPALPAQGRWRRPWIL 295
++ ++RC S PT+G+ A L G LP R R +
Sbjct: 127 ----------------------SSSSSRCWSRGPTSGLGAT-LGGTVLPPAARTPRDGL- 162
Query: 296 VRRRPRPCCRFSSA---LLASDTSCLLLRFLGSWLWFSDPNSSPA 337
R R R R S+A L + CL SWLW P PA
Sbjct: 163 -RDRGRLLSRNSTARRSFLELPSKCLT-----SWLWVIAPRPGPA 201
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 34.7 bits (78), Expect = 0.14
Identities = 45/156 (28%), Positives = 52/156 (33%), Gaps = 13/156 (8%)
Query: 136 GRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMDSKARQG 195
GR R R A R S A P A PG L G G
Sbjct: 12 GRATDRFLRMFAKPGVSPRRSPALPRPGFPA-PGFPALRLPRRRAQLGVKLGGGPSPASG 70
Query: 196 RRPRPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWR 255
RP P L G + PW+ GP RP R L LQ + P G P+ R
Sbjct: 71 ARPSPHLEGAGCETRPWL------GP---RPRRRLALHLQVPEGARQLGPRTGAQPSRHR 121
Query: 256 QDKA---ALAARCASCPTAGVSAPCLPGPALPAQGR 288
+ +A AL S AP LP P+ GR
Sbjct: 122 RQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGR 157
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 34.7 bits (78), Expect = 0.14
Identities = 49/189 (25%), Positives = 70/189 (37%), Gaps = 33/189 (17%)
Query: 67 RLEGASFPTASPPPASLWQSPK-AGLQVVDPIEACIPHFSSGRRTEDLFLSSAHFGGCSC 125
R F T SP A +SP+ G D P R D ++S+
Sbjct: 209 RARAGPFLTPSPLHAVAMRSPRPCGRPPTDS-----PDAGGAGRPLDGYISAL------- 256
Query: 126 HWALERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEA 185
L RR + G PR++ G A P ++ S + PD S +PG+ ARPA
Sbjct: 257 ---LRRRRRRGAGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGS----ARPAR------ 303
Query: 186 ASMDSKARQGRRPRPELRGTTQLSSPW----VPRSQLPGPSLSRPLRSLRAKL-QARHVS 240
S R G P + +S W P P + S P +L +A+++
Sbjct: 304 --EPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIP 361
Query: 241 GAGHPAAGL 249
GA GL
Sbjct: 362 GAQAATRGL 370
Score = 30.0 bits (66), Expect = 3.4
Identities = 19/70 (27%), Positives = 29/70 (41%)
Query: 114 FLSSAHFGGCSCHWALERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGL 173
+L + G C HW ER+ ++ R A+ + E A +D D +AA A
Sbjct: 19 WLEGSLAGLCELHWLRERQEYRVQQALRLAQPGMGGAEAEDEEDADEDEDAAAARRAAAA 78
Query: 174 VARPAECLRG 183
+ E L G
Sbjct: 79 LEEQLEALPG 88
>gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]
Length = 1484
Score = 34.7 bits (78), Expect = 0.14
Identities = 54/239 (22%), Positives = 86/239 (35%), Gaps = 39/239 (16%)
Query: 138 RCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVAR-------------PAECLRGE 184
R +S + P++ + S P + PG LV+ P + RGE
Sbjct: 895 RSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGE 954
Query: 185 AASMDSKARQGRRPRPELRGTTQLSSP---WVPRSQLPGPSLSRPLRSLRAKLQARHVSG 241
S R+G RPR L ++ P +P S + + P + +L +R
Sbjct: 955 PVRR-SAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPA 1013
Query: 242 AGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPAQGRWRRPWI------- 294
A P+ PA R++++ +A P A + L P R RR +
Sbjct: 1014 APPPS----PAA-REEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTE 1068
Query: 295 --------LVRRRP--RPCCRFSSALLASDTSCLLLRFLGSWLWFSDPNSSPARSEEGG 343
L P RP + L D + + GS+ SDP ++PAR+ G
Sbjct: 1069 AADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSG 1127
>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapiens]
Length = 1554
Score = 34.7 bits (78), Expect = 0.14
Identities = 54/239 (22%), Positives = 86/239 (35%), Gaps = 39/239 (16%)
Query: 138 RCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVAR-------------PAECLRGE 184
R +S + P++ + S P + PG LV+ P + RGE
Sbjct: 965 RSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGE 1024
Query: 185 AASMDSKARQGRRPRPELRGTTQLSSP---WVPRSQLPGPSLSRPLRSLRAKLQARHVSG 241
S R+G RPR L ++ P +P S + + P + +L +R
Sbjct: 1025 PVRR-SAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPA 1083
Query: 242 AGHPAAGLVPALWRQDKAALAARCASCPTAGVSAPCLPGPALPAQGRWRRPWI------- 294
A P+ PA R++++ +A P A + L P R RR +
Sbjct: 1084 APPPS----PAA-REEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTE 1138
Query: 295 --------LVRRRP--RPCCRFSSALLASDTSCLLLRFLGSWLWFSDPNSSPARSEEGG 343
L P RP + L D + + GS+ SDP ++PAR+ G
Sbjct: 1139 AADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSG 1197
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 34.3 bits (77), Expect = 0.18
Identities = 33/120 (27%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 142 SARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPA--ECLRGEAASMDSKARQGRRPR 199
SA A P A+ P PGA P R A S+ R G
Sbjct: 14 SAGAGAEEPTPHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGL 73
Query: 200 PELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWRQDKA 259
P ++ S+P P P P RP RAK + RH GAG G W ++++
Sbjct: 74 PGAPESSTASAPGEPSP--PSPPCRRPGPDCRAKSRGRHGLGAGLGGPGARLFGWLKERS 131
>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
sapiens]
Length = 1483
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 3/115 (2%)
Query: 124 SCHWALERRGKLGRR-CPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLR 182
+C A RR GR SA + E ++ + GL RP + +R
Sbjct: 1230 ACQPATARRNSRGRNYTEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTIR 1289
Query: 183 GEAASMDSKARQGRRP--RPELRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQ 235
G+ + + AR GRRP +P +Q +P V +++ L S R L+
Sbjct: 1290 GKHSVIPPAARSGRRPGKKPHSTRRSQPKAPPVDDAEVDELVLQTKRSSRRQSLE 1344
>gi|239754415 PREDICTED: hypothetical protein XP_002345991 [Homo
sapiens]
Length = 205
Score = 34.3 bits (77), Expect = 0.18
Identities = 45/145 (31%), Positives = 59/145 (40%), Gaps = 17/145 (11%)
Query: 130 ERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMD 189
E R R C + R S Q SR+ +P A P A L ++P L D
Sbjct: 62 EDRKAAPRGCSAAGEARGSGFTRQALSRSPAEPGPGAQPAA--LRSQPGTWLSVSRPRRD 119
Query: 190 SKARQGRRPR-PE----LRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGH 244
S +G P PE R ++ L+ P RSQ SL R LRSL+++L + G
Sbjct: 120 SP--EGYPPETPEESCAARPSSSLARPSTYRSQPRLRSLRRRLRSLQSQLPV--LLTPGR 175
Query: 245 PAAGLVPALWRQDKAALAARCASCP 269
P + P AL A A CP
Sbjct: 176 PGSRPPP------NRALRAPAAPCP 194
>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 34.3 bits (77), Expect = 0.18
Identities = 41/141 (29%), Positives = 53/141 (37%), Gaps = 15/141 (10%)
Query: 148 SSPP-VQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMDSKARQGRR--PRPELRG 204
S PP QR ++ ++ P AA G G + P LRG A RR R EL G
Sbjct: 107 SGPPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAG 166
Query: 205 TTQ----LSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWRQDKAA 260
+ + + RS P PL LR G G P AG+V A W +D
Sbjct: 167 SGRRWWGVGEAREGRS-APPRDWPEPLGELRPSAPR---GGKGGPRAGVVAASWARDSGP 222
Query: 261 LAARCASCPTAGVSAPCLPGP 281
R P + + GP
Sbjct: 223 GVGR----PVPDLEVAVINGP 239
>gi|239748949 PREDICTED: hypothetical protein XP_002346841 [Homo
sapiens]
Length = 205
Score = 34.3 bits (77), Expect = 0.18
Identities = 45/145 (31%), Positives = 59/145 (40%), Gaps = 17/145 (11%)
Query: 130 ERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMD 189
E R R C + R S Q SR+ +P A P A L ++P L D
Sbjct: 62 EDRKAAPRGCSAAGEARGSGFTRQALSRSPAEPGPGAQPAA--LRSQPGTWLSVSRPRRD 119
Query: 190 SKARQGRRPR-PE----LRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGH 244
S +G P PE R ++ L+ P RSQ SL R LRSL+++L + G
Sbjct: 120 SP--EGYPPETPEESCAARPSSSLARPSTYRSQPRLRSLRRRLRSLQSQLPV--LLTPGR 175
Query: 245 PAAGLVPALWRQDKAALAARCASCP 269
P + P AL A A CP
Sbjct: 176 PGSRPPP------NRALRAPAAPCP 194
>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
sapiens]
Length = 386
Score = 34.3 bits (77), Expect = 0.18
Identities = 41/141 (29%), Positives = 53/141 (37%), Gaps = 15/141 (10%)
Query: 148 SSPP-VQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMDSKARQGRR--PRPELRG 204
S PP QR ++ ++ P AA G G + P LRG A RR R EL G
Sbjct: 107 SGPPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAG 166
Query: 205 TTQ----LSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWRQDKAA 260
+ + + RS P PL LR G G P AG+V A W +D
Sbjct: 167 SGRRWWGVGEAREGRS-APPRDWPEPLGELRPSAPR---GGKGGPRAGVVAASWARDSGP 222
Query: 261 LAARCASCPTAGVSAPCLPGP 281
R P + + GP
Sbjct: 223 GVGR----PVPDLEVAVINGP 239
>gi|239742971 PREDICTED: hypothetical protein XP_002342727 [Homo
sapiens]
Length = 205
Score = 34.3 bits (77), Expect = 0.18
Identities = 45/145 (31%), Positives = 59/145 (40%), Gaps = 17/145 (11%)
Query: 130 ERRGKLGRRCPRSARGRASSPPVQRESRASQDPDHSAAPGAGGLVARPAECLRGEAASMD 189
E R R C + R S Q SR+ +P A P A L ++P L D
Sbjct: 62 EDRKAAPRGCSAAGEARGSGFTRQALSRSPAEPGPGAQPAA--LRSQPGTWLSVSRPRRD 119
Query: 190 SKARQGRRPR-PE----LRGTTQLSSPWVPRSQLPGPSLSRPLRSLRAKLQARHVSGAGH 244
S +G P PE R ++ L+ P RSQ SL R LRSL+++L + G
Sbjct: 120 SP--EGYPPETPEESCAARPSSSLARPSTYRSQPRLRSLRRRLRSLQSQLPV--LLTPGR 175
Query: 245 PAAGLVPALWRQDKAALAARCASCP 269
P + P AL A A CP
Sbjct: 176 PGSRPPP------NRALRAPAAPCP 194
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,291,997
Number of Sequences: 37866
Number of extensions: 920824
Number of successful extensions: 4145
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 4053
Number of HSP's gapped (non-prelim): 266
length of query: 368
length of database: 18,247,518
effective HSP length: 104
effective length of query: 264
effective length of database: 14,309,454
effective search space: 3777695856
effective search space used: 3777695856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.