| Name: LOC100291743 | Sequence: fasta or formatted (427aa) | NCBI GI: 239756545 | |
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Description: PREDICTED: hypothetical protein XP_002344931
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.9 51 3 C cysteine 2.3 10 2 D aspartate 2.1 9 1 E glutamate 2.1 9 1 F phenylalanine 2.1 9 1 G glycine 9.8 42 2 H histidine 0.5 2 1 I isoleucine 0.9 4 1 K lysine 2.3 10 1 L leucine 7.5 32 2 M methionine 0.9 4 1 N asparagine 2.1 9 1 P proline 13.8 59 4 Q glutamine 2.3 10 1 R arginine 12.9 55 4 S serine 15.2 65 5 T threonine 4.4 19 1 V valine 3.7 16 2 W tryptophan 2.6 11 1 Y tyrosine 0.2 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002344931 LOC100288859 1.000 PREDICTED: hypothetical protein XP_002343508 LOC100289969 0.543 PREDICTED: hypothetical protein XP_002347692 FLJ22184 0.041 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.032 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.032 PREDICTED: hypothetical protein LOC80164 ATN1 0.030 atrophin-1 ATN1 0.030 atrophin-1 COL4A5 0.029 type IV collagen alpha 5 isoform 2 precursor TENC1 0.029 tensin like C1 domain containing phosphatase isoform... TENC1 0.029 tensin like C1 domain containing phosphatase isoform... TENC1 0.029 tensin like C1 domain containing phosphatase isoform... COL4A5 0.029 type IV collagen alpha 5 isoform 3 precursor PCLO 0.029 piccolo isoform 2 PCLO 0.029 piccolo isoform 1 NACA 0.028 nascent polypeptide-associated complex alpha subuni... COL4A5 0.028 type IV collagen alpha 5 isoform 1 precursor SRRM2 0.028 splicing coactivator subunit SRm300 COL1A1 0.026 alpha 1 type I collagen preproprotein TTMA 0.026 hypothetical protein LOC645369 FMN1 0.025 formin 1 SYNJ1 0.025 synaptojanin 1 isoform a SYNJ1 0.025 synaptojanin 1 isoform b LOC100133756 0.025 PREDICTED: hypothetical protein, partial SRCAP 0.025 Snf2-related CBP activator protein TNKS1BP1 0.023 tankyrase 1-binding protein 1 LOC100289949 0.023 PREDICTED: hypothetical protein XP_002346877 BAT2 0.023 HLA-B associated transcript-2 COL16A1 0.023 alpha 1 type XVI collagen precursor COL1A2 0.023 alpha 2 type I collagenHuman BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
