Guide to the Human Genome
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Name: ZNF213 Sequence: fasta or formatted (459aa) NCBI GI: 32698678
Description:

zinc finger protein 213

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [459aa] zinc finger protein 213
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         33           2
 C cysteine            3.3         15           2
 D aspartate           4.6         21           1
 E glutamate           9.6         44           2
 F phenylalanine       3.9         18           1
 G glycine             9.2         42           1
 H histidine           4.4         20           1
 I isoleucine          1.5          7           1
 K lysine              4.4         20           1
 L leucine             7.4         34           2
 M methionine          0.7          3           1
 N asparagine          0.7          3           1
 P proline             7.4         34           3
 Q glutamine           6.5         30           1
 R arginine            8.7         40           3
 S serine              8.1         37           3
 T threonine           3.9         18           2
 V valine              5.7         26           2
 W tryptophan          2.2         10           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 213 
ZNF213                1.000   zinc finger protein 213 
ZNF500                0.309   zinc finger protein 500 
ZNF192                0.300   zinc finger protein 192 
ZKSCAN4               0.298   zinc finger with KRAB and SCAN domains 4 
ZKSCAN1               0.296   zinc finger protein 36 
ZNF202                0.287   zinc finger protein 202 
ZKSCAN5               0.287   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.287   zinc finger with KRAB and SCAN domains 5 
ZNF197                0.286   zinc finger protein 197 isoform 1 
ZNF263                0.284   zinc finger protein 263 
ZKSCAN3               0.284   zinc finger with KRAB and SCAN domains 3 
ZSCAN23               0.272   zinc finger protein 390 
ZNF75D                0.271   zinc finger protein 75 
ZNF167                0.269   zinc finger protein 167 isoform 1 
ZSCAN21               0.255   zinc finger protein 38 
ZNF498                0.254   zinc finger and SCAN domain containing 25 
ZNF436                0.214   zinc finger protein 436 
ZNF436                0.214   zinc finger protein 436 
ZNF3                  0.193   zinc finger protein 3 isoform 2 
ZNF446                0.192   zinc finger protein 446 
ZNF577                0.190   zinc finger protein 577 isoform b 
ZNF331                0.183   zinc finger protein 331 
ZNF331                0.183   zinc finger protein 331 
ZNF331                0.183   zinc finger protein 331 
ZNF189                0.182   zinc finger protein 189 isoform 2 
ZNF189                0.182   zinc finger protein 189 isoform 1 
ZNF180                0.180   zinc finger protein 180 
ZNF16                 0.180   zinc finger protein 16 
ZNF557                0.180   zinc finger protein 557 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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