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Search of human proteins with 116292168
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116292168 KRAB A domain containing 1 [Homo sapiens]
(1030 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116292168 KRAB A domain containing 1 [Homo sapiens] 2167 0.0
gi|163965366 nascent polypeptide-associated complex alpha subuni... 91 6e-18
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 81 6e-15
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 78 4e-14
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 74 9e-13
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 72 2e-12
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 70 1e-11
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 70 1e-11
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 68 4e-11
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 65 3e-10
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 65 4e-10
gi|150170670 piccolo isoform 2 [Homo sapiens] 65 4e-10
gi|150378539 piccolo isoform 1 [Homo sapiens] 65 4e-10
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 64 6e-10
gi|55750053 atrophin-1 [Homo sapiens] 64 7e-10
gi|55750041 atrophin-1 [Homo sapiens] 64 7e-10
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 63 2e-09
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 62 4e-09
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 62 4e-09
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 62 4e-09
gi|188536004 zinc finger protein 469 [Homo sapiens] 62 4e-09
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 58 5e-08
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 57 7e-08
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 57 7e-08
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 57 7e-08
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 57 7e-08
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 57 7e-08
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 57 7e-08
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 57 7e-08
gi|48762934 alpha 2 type I collagen [Homo sapiens] 56 2e-07
>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
Length = 1030
Score = 2167 bits (5615), Expect = 0.0
Identities = 1030/1030 (100%), Positives = 1030/1030 (100%)
Query: 1 MRENYETLVSVGTAELLPLSAFLSPSEPGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLH 60
MRENYETLVSVGTAELLPLSAFLSPSEPGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLH
Sbjct: 1 MRENYETLVSVGTAELLPLSAFLSPSEPGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLH 60
Query: 61 LTALVQLVKEIPEFLFGEVKGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCL 120
LTALVQLVKEIPEFLFGEVKGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCL
Sbjct: 61 LTALVQLVKEIPEFLFGEVKGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCL 120
Query: 121 PDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPT 180
PDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPT
Sbjct: 121 PDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPT 180
Query: 181 HSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLG 240
HSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLG
Sbjct: 181 HSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLG 240
Query: 241 TSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQEN 300
TSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQEN
Sbjct: 241 TSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQEN 300
Query: 301 PGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATG 360
PGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATG
Sbjct: 301 PGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATG 360
Query: 361 DTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRS 420
DTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRS
Sbjct: 361 DTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRS 420
Query: 421 QKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGS 480
QKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGS
Sbjct: 421 QKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGS 480
Query: 481 PVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTAD 540
PVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTAD
Sbjct: 481 PVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTAD 540
Query: 541 KEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRW 600
KEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRW
Sbjct: 541 KEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRW 600
Query: 601 LPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEP 660
LPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEP
Sbjct: 601 LPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEP 660
Query: 661 DLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQD 720
DLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQD
Sbjct: 661 DLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQD 720
Query: 721 PCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAA 780
PCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAA
Sbjct: 721 PCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAA 780
Query: 781 PPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGR 840
PPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGR
Sbjct: 781 PPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGR 840
Query: 841 RPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDL 900
RPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDL
Sbjct: 841 RPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDL 900
Query: 901 QGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSP 960
QGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSP
Sbjct: 901 QGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSP 960
Query: 961 LPPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPSSLLGGVQRALQEELWGG 1020
LPPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPSSLLGGVQRALQEELWGG
Sbjct: 961 LPPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPSSLLGGVQRALQEELWGG 1020
Query: 1021 EHRDPRWGAH 1030
EHRDPRWGAH
Sbjct: 1021 EHRDPRWGAH 1030
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 90.9 bits (224), Expect = 6e-18
Identities = 225/997 (22%), Positives = 316/997 (31%), Gaps = 162/997 (16%)
Query: 85 SPESESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPT 144
+P S G + + +P AA P P G + P G + P A TP S GP
Sbjct: 946 TPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPP--AATP--PSPKGGPA 1001
Query: 145 GDGVQGSPLPIKTADKPWPTRKEGPGAL---GGEPSPPTHSPSRRKSHRGQERGTSEAGI 201
+G+P P P+ K P A G +PP +P K
Sbjct: 1002 TPSPKGAPTPPAVTP---PSPKGSPAATPFPKGASTPPAATPPSPKG------------- 1045
Query: 202 SPGNSPLQGLINCLKEILVPGPRHPETSPSFL-PPLPSLGTSRLTRADLGPGSPPWAVKT 260
SP +PL +P P+ +PS P P T + SP A
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP 1105
Query: 261 EAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGP----GYLLT 316
A + P GL + PS G GA + P G L T
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1165
Query: 317 PPPH---------PDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVP- 366
PPP P GGL + + +P PA+ P P AT +G P
Sbjct: 1166 PPPKGAPTTPAATPPSPKGGLATPSPKG----APTTPAATPP--SPKGGLATPSPKGAPT 1219
Query: 367 QPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPEL- 425
P+ P + ++ + PP+ PP + P S K L
Sbjct: 1220 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279
Query: 426 -QPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGN 484
PH+ A P P G GP+ P+G PT +++ SP G+
Sbjct: 1280 TPPHKGAPNPAVVTPPSPKG-------GPATS-PPKGAPTPPAATPP--------SPKGS 1323
Query: 485 QGQHPGKG--SPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRG----PRRAE---PR 535
G P KG +PP +P P P P P ++ + +G P E P
Sbjct: 1324 PGTPPPKGAPTPPAVTP-----------PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPP 1372
Query: 536 NWTADKEGLRAEACESARLGQG----RGEAPTRSLHLVSPQVFTSSCV----PACHQRGF 587
T +G A S + G +G+ + ++ +SP+ ++ V A +G
Sbjct: 1373 AATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432
Query: 588 KDPGATRPGVWRWLPEGSAPK---PSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGS 644
P A P + P SAPK +P + L + P P P+P S
Sbjct: 1433 LTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKE-----PPAPKQVATS 1487
Query: 645 SSSFSGSEGEDPRPEPDLWKPLPQERDRLP-----------------SCKPPVPLSPCPG 687
SS P P L +P +P S K P L+P
Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEA 1547
Query: 688 GTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPV---SQLEKRPRVSEASRGLELGH 744
P + SP + P P+ + P S + P E +
Sbjct: 1548 LIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTS 1607
Query: 745 GRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPP-------CHCGK 797
P+ A T + P P + P+ P P +PPV P+S P C G
Sbjct: 1608 PSPK-EAPTPPAVTPPSPEKGPATPAPKGTP---TSPPVTPSSLKDSPTSPASVTCKMGA 1663
Query: 798 PLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQ-------------- 843
+ Q S G + L L A E + T R G + +
Sbjct: 1664 TVPQA--SKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPS 1721
Query: 844 ----GPGPMGQASWMWTLP---RGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCR 896
GP+ + LP + A G H P KGP P +
Sbjct: 1722 AKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSP----KGPLAPPESKASTPLTAAA 1777
Query: 897 AGDLQGLSRGTARRARPLPPDAPPAEP-PGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTG 955
+ + A P PP + P P P QQ L S+P P+ PL
Sbjct: 1778 FEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADE 1837
Query: 956 GHQSPLPPLVP--AALPLQGA---SPPAASADADVPT 987
PL P P +P Q P SA VPT
Sbjct: 1838 DELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPT 1874
Score = 83.2 bits (204), Expect = 1e-15
Identities = 212/959 (22%), Positives = 290/959 (30%), Gaps = 180/959 (18%)
Query: 102 PEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPL--PIKTAD 159
P A + + C L P+ P S P + P + + DG+ + P+ ++
Sbjct: 709 PVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKV-DGISHTSALAPVASSP 767
Query: 160 KPWPTRKEG-----------------PGALGGEPSPPTHSPSRRKSHRGQERGTS----- 197
K PT G P LG SP T P +K G +
Sbjct: 768 KECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSP 827
Query: 198 ----EAGISPGNS-PLQGLINCLKEILVPGPRHPE--TSPSFLPPLPSLGTSRLTRADLG 250
EA P NS QG + P P P+ +PS + PL G + +
Sbjct: 828 VSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPT 887
Query: 251 PGSPPWAVKTEAVSGDCPLQG-LLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSG 309
P E + P Q L P+ P+P G+ A G
Sbjct: 888 PSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIP---------ASPSPKG 938
Query: 310 GPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPS 369
P PP P GPA+ P P P+AT P P
Sbjct: 939 APTPPAATPPSPK-------------------GGPATPSPKWAPTPPAATP-----PSPK 974
Query: 370 WGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHR 429
GP + + +P A KG P SP P P P S + P +
Sbjct: 975 GGPATPSPKGAPTPPAATPPSPKGGPAT-PSPKGAPTPPAVTPPSPKGSPAATPF---PK 1030
Query: 430 SHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHP 489
S P P G P+ P+G PT+ +++ SP G
Sbjct: 1031 GASTPPAATPPSPKG-------SPAATPLPKGAPTTPAAT--------LPSPKGGPATPS 1075
Query: 490 GKGSP--PGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAE 547
KG+P P ++P P P PA P A P P + K GL
Sbjct: 1076 LKGAPTPPAATP-----------PSPKGGPATPSPKGAPMPPAATPP----SPKGGLATP 1120
Query: 548 ACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDP----GATRPGVWRWLPE 603
+ A PT T + P + G P T P P+
Sbjct: 1121 PHKGA---------PT-----------TPAATPPSPKGGLATPPPKGAPTTPAATPPSPK 1160
Query: 604 GSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLW 663
G P P + A P + PSP +P + ++ P P+ L
Sbjct: 1161 GGLATPPP----KGAPTTPAATPPSPKGGLATPSPKGAPTTPAA------TPPSPKGGLA 1210
Query: 664 KPLPQERDRLPSCKPPVP----LSPCPGGTPA--GSSGGSPGEDPRRTEPRYCSGLGAGT 717
P P+ P+ PP P +P P G P ++ SP P P+ GA T
Sbjct: 1211 TPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPK-----GAPT 1265
Query: 718 AQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPP 777
P S + G P A T P P P+ SPP P P
Sbjct: 1266 PPAATPPSL--------KGGLATPPHKGAPNPAVVT-----PPSPKGGPATSPPKGAPTP 1312
Query: 778 EAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNR 837
AA P P S P G P A T A T ++
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPP------AVTPPSPKGTPTLPATTPSSKGGPTTPSSK 1366
Query: 838 LGRRPQGPGPMGQASWMWTLP---RGPRWAHGPGHRHLPYWRQKGPTR-PKPKILRGQGE 893
G P P + T P RGP G P P + P + R
Sbjct: 1367 EGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA 1426
Query: 894 SCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAH 953
+ GDL + + AP P L + TP PPA +A
Sbjct: 1427 TPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVAT 1486
Query: 954 TGGHQ----SPLP---PLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPSSL 1005
+ + +P P P +PA +P PA + P +AP K P++L
Sbjct: 1487 SSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDP---IAPTATLLSKKTPATL 1542
Score = 74.7 bits (182), Expect = 4e-13
Identities = 164/719 (22%), Positives = 230/719 (31%), Gaps = 133/719 (18%)
Query: 85 SPESESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPT 144
+P S G + + +P A P P G + P G + P AT P+ P
Sbjct: 1270 TPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPP-AATPPSPKGSPGTPP 1328
Query: 145 GDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHS-----PSRRKSHRGQERGTSEA 199
G P + K PT + G P+ P+ P+ SH+G G +
Sbjct: 1329 PKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKG---GPAMT 1385
Query: 200 GISPGNSPLQGLINCLKEILVPGPRHPETSPSFLP---------PLPSLGTSRLTRADLG 250
SP P +P P+ TSP+ +P P+ G + ++ DL
Sbjct: 1386 PPSPKRGPA-----------IPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLT 1434
Query: 251 P--------------GSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRR 296
P +P T + GD L + P + P+P V
Sbjct: 1435 PPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVT------PPSPKEPPAPKQVATSS 1488
Query: 297 LQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVK---MENSWVQSPPGPASCQPGRQP 353
+ A G P P P S + + + S PA+ P
Sbjct: 1489 SPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEAL 1548
Query: 354 LSPSAT----GDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQL--PPT 407
+ P+ T T +P P P ++ +SSP + KG P SP +L PP
Sbjct: 1549 IPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAP----SPKELLIPPA 1604
Query: 408 SCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTS-- 465
S +P+ P P GP+ P AP+GTPTS
Sbjct: 1605 VTSPSPKEA----------------------PTPPAVTPPSPEKGPATP-APKGTPTSPP 1641
Query: 466 FSSSSSTDWDLDFGSPVGNQGQ---HPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCS 522
+ SS D S G KG P P LKE+ ++ PA P S
Sbjct: 1642 VTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGP-----TALKEV---LVAPA-PES 1692
Query: 523 SAADRGPRRAEPRNWTADKEGLRAEACESARLGQG-RGEAPTRSLHLVSPQVFTSSCVPA 581
+ P R P+ T C G +G T + + P SS
Sbjct: 1693 TPIITAPTRKGPQ--TKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAK 1750
Query: 582 CHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLE-------SALRGILPVRPLRFACVG 634
G P PE A P E SA P P+
Sbjct: 1751 GKDASHSPKGPLAP------PESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLA- 1803
Query: 635 GPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPL-PQERDRLPSCKPPVPLSPCPGGTPAGS 693
PSP P+ F S P KPL P + D L PP P+S GG P S
Sbjct: 1804 -PSPVPTLPPKQQFLPSSPGLVLESPS--KPLAPADEDELLPLIPPEPIS---GGVPFQS 1857
Query: 694 ---------SGGSPGEDPRRTEPRYCSGLGAGTAQDPC-PVSQLEKRPRVSEASRGLEL 742
S G P P +P + G+GT D V +LE++ ++ +L
Sbjct: 1858 VLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQQAQL 1916
Score = 62.4 bits (150), Expect = 2e-09
Identities = 171/706 (24%), Positives = 221/706 (31%), Gaps = 135/706 (19%)
Query: 343 GPASCQPGRQPLSPSATGDTRGVPQPSWG-PEAQAASASSSPLEALEACLKGIPPNGSSP 401
G S P P+ VP S P A + + +PL L + IP + SP
Sbjct: 679 GTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPE-IPKSVPSP 737
Query: 402 SQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRG 461
S LPP + D S L P S +E E G S + +G
Sbjct: 738 S-LPPAGTPPGTKKVDGISHTSALAPVASSPKECPTED-----------SGASATASSKG 785
Query: 462 TPTSFSSSSSTDWDLDFGSPVGNQGQHPG--KGSPPGSSPLQGL-------------ENC 506
T T + S S G V Q + P KGS +P+ L EN
Sbjct: 786 TLTYLADSPSP-----LGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENS 840
Query: 507 L-----KEIPVPVLRPAWPCSSAADRG-------------PRRAEPR----NWTADKEGL 544
L K+ P P P A P + P N KEG
Sbjct: 841 LSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGP 900
Query: 545 RAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEG 604
A + A +P ++ +P+ +S P +G P A P P+G
Sbjct: 901 ATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSP----KGAPTPPAATPPS----PKG 952
Query: 605 SAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWK 664
PSP P P PSP P + S P P P
Sbjct: 953 GPATPSPKWA---------PTPP----AATPPSPKGGPATPSPKGA-----PTP-PAATP 993
Query: 665 PLPQERDRLPSCK----PPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQD 720
P P+ PS K PP P P G+PA + P P G A T
Sbjct: 994 PSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP 1053
Query: 721 ---PCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPP 777
P + P+ A+ L+ G P A T P+G P PS P P P
Sbjct: 1054 KGAPTTPAATLPSPKGGPATPSLK---GAPTPPAATPPS--PKGGPATPS---PKGAPMP 1105
Query: 778 EAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNR 837
AA P P L P H G P + A LAT A +
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPT-----TPAATPPSPKGGLATPPPKGAPTTPAATPPSPK 1160
Query: 838 LGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRA 897
G P P G + P P+ G P PK +
Sbjct: 1161 GGLAT--PPPKGAPTTPAATPPSPK---------------GGLATPSPKGAPTTPAATPP 1203
Query: 898 GDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGH 957
GL+ + + A P PP+ GL S + P+ AA P P GG
Sbjct: 1204 SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK----GAPTTPAATPPSP----KGGP 1255
Query: 958 QSPLP---PLVPAALP--LQG--ASPPAASADADVPTSGVAPDGIP 996
+P P P PAA P L+G A+PP A + +P G P
Sbjct: 1256 ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGP 1301
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 80.9 bits (198), Expect = 6e-15
Identities = 238/1005 (23%), Positives = 333/1005 (33%), Gaps = 183/1005 (18%)
Query: 95 LDGERASPEA-AAAREPCPLR-GLLSCLPDG-PTSQPHLATTPTDSSCSSGPTG------ 145
+D +R +A AAAR P GLL+ P G P P + ++G G
Sbjct: 1 MDNKRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAE 60
Query: 146 --DGVQGSPLPIKTADKPWPTRKEG----------PGALGGEPSPPTHSPSRRK-SHRGQ 192
G+ G+ +P ++A + PTR G P + GE +PP + S S G+
Sbjct: 61 RAGGIGGATIP-ESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGR 119
Query: 193 ERGTSEAG--------ISPGNSPLQGLINCL--KEILVPGPRHPETSPSFLPPLPSLGT- 241
GT+ G IS + +G + L G R + P+ P P++
Sbjct: 120 ASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARR 179
Query: 242 SRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENP 301
SR ++G P + + P +G + E PSP+ RR
Sbjct: 180 SRAAGTEVGLPRPAPSARPRP-----PTEGPRKSVSSASEHSTTEPSPAA--RRRPSAGG 232
Query: 302 GAWKRGS---------------GGPGYLLTP--PPHPDL----GAGGLLSVKMENSWVQS 340
G + S GP TP P HP G L ++ +
Sbjct: 233 GLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDA 292
Query: 341 PP--GPASCQPGRQPLSPSATG-------DTRGVPQPSWGPEAQAASAS---SSPLEALE 388
P GP S P P SPS T D P P+ P + + + P +
Sbjct: 293 APALGPLSSSPLATP-SPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAP 351
Query: 389 ACLKGIP-PNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQS 447
L+ +P P + PSQ PP+ + Q S P +Q S + + + P PL L S
Sbjct: 352 PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSS 411
Query: 448 CVRDGPSRPLAPRGTPT-----SFSSSSSTDWDLDFGSPVGNQGQHPGKG------SPPG 496
+ G+PT SF + S SP P S P
Sbjct: 412 L------QATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPA 465
Query: 497 SSPLQ-GLENCLKEIPVPV-LRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARL 554
S PLQ L + + P+ + P SS A P+ E + A S +
Sbjct: 466 SPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQT 525
Query: 555 GQGRGEAP--------------TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRW 600
P T S L +P + T C C + P T P
Sbjct: 526 PPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPP----- 580
Query: 601 LPE-----GSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGED 655
PE + P +P L+G LP PL + + P P P + +
Sbjct: 581 -PETPSSIATPPPQAPPALASPPLQG-LPSPPL--SPLATPPPQAPPXLALPPLQAPPSP 636
Query: 656 PRPEP--DLWKPLPQERDRL-------PSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTE 706
P P L P PQ + L P PP P P PA SP P T
Sbjct: 637 PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA-----SPPVSPSATP 691
Query: 707 PRYCS-GLGAGTAQ-DPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHE--RLLPQGP 762
P L A Q P P + P + + P +AA + P P
Sbjct: 692 PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA------PPPLAAPPLQVPPSPPASP 745
Query: 763 PELPSESPPPELPPPEAAPPV----LPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLA 818
P PS +PPP +PP AAPP+ P +SL P KP Q +L + L
Sbjct: 746 PMSPSATPPPRVPPLLAAPPLQVPPSPPASL-PMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 819 TALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLP--------RGPRWAHGPGHR 870
+ G A + ++ L P P+ A + P + PR PG
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG-- 862
Query: 871 HLPYWRQKGP-------TRPKPKILRGQGESCRAGDLQGLSRGTARRARPL------PPD 917
P GP P P R + DL G S L P
Sbjct: 863 --PDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 920
Query: 918 APPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLP 962
A PP +L + P+ + PA P LA G +PLP
Sbjct: 921 GAAASPP-----PDAELAACHPAAWSRGPAPP-LAFRGAPGAPLP 959
Score = 63.5 bits (153), Expect = 1e-09
Identities = 151/606 (24%), Positives = 192/606 (31%), Gaps = 127/606 (20%)
Query: 110 PCPLRGLLSCLPDGPTSQPHLATTPTDSS--CSSGPTGDGVQGSPL-PIKTADKPWPTRK 166
PCPL+ S L P P TP + + P G+ PL P+ T P
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL 625
Query: 167 EGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHP 226
P L PSPP P +SP +P N L L+ P P
Sbjct: 626 ALP-PLQAPPSPPASPP-----------------LSPLATPSPQAPNALAVHLLQAPFSP 667
Query: 227 ETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRH 286
SP P P SPP + P A
Sbjct: 668 PPSPPVQAPFSP------------PASPPVS----------------------PSATPPS 693
Query: 287 PSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPH--PDLGAGGLLSVKMENSWVQSPPGP 344
+P + LQ P P TPPP P L A L Q PP P
Sbjct: 694 QAPPSLAAPPLQVPPSPPASPPMSPS--ATPPPQAPPPLAAPPL----------QVPPSP 741
Query: 345 ASCQPGRQPLSPSATGDTRGVPQPSWGP-EAQAASASSSPLEALEACLKGIPPNGSSP-- 401
P P+SPSAT R P + P + + +S P+ L PP ++P
Sbjct: 742 ----PASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPL 797
Query: 402 SQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPL--AP 459
LP S Q S S + P + +A PVL L P+ P AP
Sbjct: 798 QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP--PVLAAPLLQVPPSPPASPTLQAP 855
Query: 460 RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAW 519
R PT +S + P PG PP SP L P L
Sbjct: 856 RRPPTPGPDTSVS-------GPRLTLALAPGPPPPPSRSPSSTLSG-------PDLAGH- 900
Query: 520 PCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCV 579
SS+A P E R + + EG G +P P ++C
Sbjct: 901 --SSSATSTPE--ELRGYDSGPEG-------------GAAASPP-------PDAELAACH 936
Query: 580 PACHQRGFKDPGATR--PGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPS 637
PA RG P A R PG P + P + C G P A GPS
Sbjct: 937 PAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPS 996
Query: 638 PSPSPGSSSSFSGSEGEDPRPEPDLWKPLP----QERDRLPSCKPPVPLSPCPGGTPAGS 693
P S G +++ +G+ P+ LP Q + L+ G AG
Sbjct: 997 PGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGA--AGG 1054
Query: 694 SGGSPG 699
SGG PG
Sbjct: 1055 SGGGPG 1060
Score = 55.1 bits (131), Expect = 3e-07
Identities = 204/834 (24%), Positives = 273/834 (32%), Gaps = 154/834 (18%)
Query: 221 PGPRHPETSPSFLPPLPSLGTS-RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKEL 279
PG P S PP P + R+ A G P A + + G +
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG-----------ATI 70
Query: 280 PEAQDRH-PSPS-GVGNRRLQENPGAWKRGSGGPGYLLTPP--------------PHPDL 323
PE+ R P+ S G +R P A RG P T P P P L
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP-L 129
Query: 324 GAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSP 383
G GL + E + + G A+ P R LS A DT G P P A A + ++
Sbjct: 130 GQKGL-RISAEETVAR---GKATEAPKRSALSAGARRDTSG-PTPGTPSPAMARRSRAAG 184
Query: 384 LEALEACLKGIPPNGSSPSQLPPT--------SCSQNP--QPGDSRSQKPE----LQPHR 429
E G+P S PPT S S++ +P + ++P LQ
Sbjct: 185 TEV------GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA 238
Query: 430 SHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHP 489
S S ++ P L S R GPS RGTP + + S P G Q P
Sbjct: 239 SRSLSSSATP-----LSSPARSGPSA----RGTPRAPAHPSQP-------KPKGLQALRP 282
Query: 490 GKGSPP--GSSPLQG-LENCLKEIPVPV---LRPAWPCSSAADRGPRRAEPRNWTADKEG 543
+ +PP ++P G L + P P RP P +AA P P A
Sbjct: 283 PQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLP 342
Query: 544 LRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPE 603
L + AP L SP S P P P + +P
Sbjct: 343 LAPPS----------PSAPPSLQTLPSPPATPPSQAPP----SMTTPPMQAPPSLQTIPP 388
Query: 604 GSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLW 663
P L++ P PL + + + SP ++ S + + L
Sbjct: 389 IQVPHSLTSPSLQA------PPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLT 442
Query: 664 KPLPQERDRLPSCKPPVPLSPCPGGTPAG-------SSGGSPGEDPRRTEP-RYCSGLGA 715
P R S P P P PA S SP P P + S L +
Sbjct: 443 SP-----SRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLAS 497
Query: 716 GTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPE-LPSESPPPEL 774
+ Q P+S L P +++S + +T L P E LPS +PPP
Sbjct: 498 HSPQ--APLSSLIMPPLETQSSLAPP--------SLQTPPASLTTPPLENLPSLAPPPL- 546
Query: 775 PPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQ 834
A+ P+ PPC PLQ L E +AT +A+ Q
Sbjct: 547 --QTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQ 604
Query: 835 VNRLGRRPQGP--GPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQG 892
L P P P QA LP P L P P +
Sbjct: 605 --GLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH--- 659
Query: 893 ESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPP--AHPL 950
+A PP +PP + P +S S+TP A P A PL
Sbjct: 660 ---------------LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPL 704
Query: 951 LAHTGGHQSPLPPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPSS 1004
SP P+ P+A P A PP A+ VP S P P P PS+
Sbjct: 705 QVPPSPPASP--PMSPSATPPPQAPPPLAAPPLQVPPS---PPASP--PMSPSA 751
Score = 54.3 bits (129), Expect = 6e-07
Identities = 106/442 (23%), Positives = 146/442 (33%), Gaps = 83/442 (18%)
Query: 588 KDPGATRPGVWRWLPEGSAPKPSPLHCLESALR-----GILPVRPL--RFACVGG---PS 637
+ P A PG+ P GS P P+ +ALR G + +PL R +GG P
Sbjct: 15 RTPAARAPGLLTPRPPGSPRPPPPV--TPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 638 PSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSG-- 695
+P G + S +G+ +P P P +R P K SP P +P +SG
Sbjct: 73 SAPRAGPTRS-AGTSSRNPASRP----PASGRGERAPPAKNT---SPGPVSSPGRASGTT 124
Query: 696 --GSPGEDPRR------------TEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLE 741
G G+ R TE S L AG +D + P ++ SR
Sbjct: 125 RPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAG 184
Query: 742 LGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQ 801
G PR A R +GP + S + P PA+ +P G
Sbjct: 185 TEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPS------PAARRRPSAGGG----- 233
Query: 802 ELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGP 861
L + L AT L+ A+ GP G PR P
Sbjct: 234 ----LQRPASRSLSSSATPLSSPARS----------------GPSARGT-------PRAP 266
Query: 862 RWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPA 921
P + L R T P+ G + GT +ARP+PP A
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGT--KARPVPPPDNAA 324
Query: 922 EPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASA 981
P S L + P +P A P L P PP P + + P A
Sbjct: 325 TPLPATLPPSPPLATPLPLAPPSPSAPPSL-----QTLPSPPATPPSQAPPSMTTPPMQA 379
Query: 982 DADVPTSGVAPDGIPERPKEPS 1003
+ T + P +P PS
Sbjct: 380 PPSLQT--IPPIQVPHSLTSPS 399
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 78.2 bits (191), Expect = 4e-14
Identities = 202/802 (25%), Positives = 265/802 (33%), Gaps = 123/802 (15%)
Query: 226 PETSPSFLPP--LPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQ 283
PE SP PP P+ +R P P + EA+ PL+ L PE
Sbjct: 444 PEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEE--SPLSPPPEES 501
Query: 284 DRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTP-PPHPDLGAGGLLSVKMENSWVQSPP 342
P P L+E+P + S L TP P P+ LS E S + PP
Sbjct: 502 PLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASP---LSPPFEESPLSPPP 558
Query: 343 G--PASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
P S P LSP P P P + AS E+ L PP S
Sbjct: 559 EELPTSPPPEASRLSPPPEESPMS-PPPEESPMSPPPEASRLFPPFEESPLS--PPPEES 615
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPL--GLQSCVRDGPSRPLA 458
P PP + +P P DS P + S E +R LP+ L + P P
Sbjct: 616 PLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSP-P 674
Query: 459 PRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKE---IPVPVL 515
P +PTS +S SP + SPP L L L+E +P+P
Sbjct: 675 PEESPTSPPPEASRLSPPPEDSPT-SPPPEDSPASPPPEDSLMSLP--LEESPLLPLPEE 731
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFT 575
P S PR EP +E + E L SPQ
Sbjct: 732 PQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHL---------------SPQP-E 775
Query: 576 SSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGG 635
C+ A + P A P + +P+P LH L P
Sbjct: 776 EPCLCAVPEEPHLSPQAEGPHL--------SPQPEELHLSPQTEEPHLSPVPEE------ 821
Query: 636 PSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSG 695
P SP P S P+ E P P+E P + P PLSP P P
Sbjct: 822 PCLSPQPEESHL-------SPQSEEPCLSPRPEESHLSPELEKP-PLSPRPEKPPE---- 869
Query: 696 GSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHE 755
PG+ P E G + +S L P +SE G P ++ E
Sbjct: 870 -EPGQCPAPEELPLFPPPGEPS------LSPLLGEPALSEP--------GEPPLSPLPEE 914
Query: 756 -RLLPQGPPEL-PSESPPPELPPP------EAAPPVL-PASSLQPPCHCGKPLQQELHSL 806
L P G P L P PP LPPP AAPP L P L+ P E
Sbjct: 915 LPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPFGAKGDSDPE---- 970
Query: 807 GAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHG 866
+ LA + L T ++ + T V + P P+G AS + P P+ +
Sbjct: 971 -SPLAAPI--LETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPL 1027
Query: 867 PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGL 926
H +P P L G + G+S + L
Sbjct: 1028 LQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVS-----------------DEAEL 1070
Query: 927 HCSSSQQLLSSTPSCHAAPPA--HPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADAD 984
H ++++ S P C A P+ PL + G P P PA G A
Sbjct: 1071 HEMETEKV--SEPECPALEPSATSPLPSPMGDLSCPAPSPAPALDDFSGLGEDTA----- 1123
Query: 985 VPTSGV-APDGIPERPKEPSSL 1005
P G+ AP PE + P SL
Sbjct: 1124 -PLDGIDAPGSQPEPGQTPGSL 1144
Score = 69.7 bits (169), Expect = 1e-11
Identities = 186/764 (24%), Positives = 239/764 (31%), Gaps = 147/764 (19%)
Query: 87 ESESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGD 146
+ E++ G + P+ A PL + LP P + L+ P +S S P
Sbjct: 413 QCEAKPLGKAGVQLEPQLEA-----PLNEEMPLLP--PPEESPLSPPPEESPTSPPPEAS 465
Query: 147 GVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNS 206
+ P + + P P PP SP P +S
Sbjct: 466 RLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESP---------------LSPPPESS 510
Query: 207 PLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGD 266
P P P + P PP P+L T + P SPP+
Sbjct: 511 PFS-----------PLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESP------ 553
Query: 267 CPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAG 326
L PE P P RL P ++PPP
Sbjct: 554 ---------LSPPPEELPTSPPPEA---SRLSPPPEESPMSPPPEESPMSPPPE-----A 596
Query: 327 GLLSVKMENSWVQSPP--GPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPL 384
L E S + PP P S P LSP D+ P P P + S L
Sbjct: 597 SRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPE-DSPMSPPPEESPMSPPPEVSR--L 653
Query: 385 EALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSR-SQKPELQPHRSHSEEATREPVLPL 443
L + PP SP PP +P P SR S PE P E++ P
Sbjct: 654 SPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPED 713
Query: 444 GLQSC-VRDGPSRPL--APRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPL 500
L S + + P PL P+ P S S + SP + + P SP
Sbjct: 714 SLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSP- 772
Query: 501 QGLENCLKEIP-VPVLRP------AWPCSSAADRGPRRAEPRNWTADKEGLRAEACESAR 553
Q E CL +P P L P P P+ EP +E + E +
Sbjct: 773 QPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESH 832
Query: 554 LGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLH 613
L +P +SP+ S P K P + RP P G P P L
Sbjct: 833 L------SPQSEEPCLSPRPEESHLSPELE----KPPLSPRPEKPPEEP-GQCPAPEEL- 880
Query: 614 CLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRL 673
PL F G PS SP G + GE P PLP+E
Sbjct: 881 -------------PL-FPPPGEPSLSPLLGEPA--LSEPGEPP------LSPLPEELPLS 918
Query: 674 PSCKP------------PVPLSP----------CPGGT---PAGSSGGSPGEDPRRTE-- 706
PS +P P PLSP P G P G+ G S E P
Sbjct: 919 PSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAAPIL 978
Query: 707 PRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELP 766
S DP PV P + S G +G P + E L PQ P L
Sbjct: 979 ETPISPPPEANCTDPEPVP-----PMILPPSPGSPVGPASPILM----EPLPPQCSPLLQ 1029
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPL----QQELHSL 806
P PP + +PP LP S P GK + + ELH +
Sbjct: 1030 HSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEM 1073
Score = 68.2 bits (165), Expect = 4e-11
Identities = 160/671 (23%), Positives = 215/671 (32%), Gaps = 132/671 (19%)
Query: 342 PGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSP 401
PGP C+ +PL + P+ +A PL +PP SP
Sbjct: 409 PGPLQCEA--KPLGKAGV---------QLEPQLEAPLNEEMPL---------LPPPEESP 448
Query: 402 SQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRG 461
PP +P P SR P + S EA L L + + P P P
Sbjct: 449 LSPPPEESPTSPPPEASRLSPPPEELPASPLPEA-------LHLSRPLEESPLSP-PPEE 500
Query: 462 TPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS-------PPGSSPLQGLENCLKEIPVPV 514
+P S SS L+ SP+ + P + PP +SPL P P
Sbjct: 501 SPLSPPPESSPFSPLE-ESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPE 559
Query: 515 LRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVF 574
P P A+ P E +E + E++RL E+P +SP
Sbjct: 560 ELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESP------LSPPPE 613
Query: 575 TSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVG 634
S P P PE S P P S + + PL
Sbjct: 614 ESPLSPPPEASRLSPP-----------PEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRL 662
Query: 635 GPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSS 694
P P SP S P PE P P E RL P SP P +PA
Sbjct: 663 SPPPEESPLS-----------PPPEESPTSP-PPEASRLSPPPEDSPTSPPPEDSPASP- 709
Query: 695 GGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTH 754
P ED + P + P+ L + P++ S G L PR
Sbjct: 710 ---PPEDSLMSLPL-----------EESPLLPLPEEPQLCPRSEGPHLS---PR------ 746
Query: 755 ERLLPQGPPELPSESPPPELP--PPEAAPPVLPASSLQPPCHCGKPLQQEL--HSLGAAL 810
PE P SP PE P P+A P L + PC C P + L + G L
Sbjct: 747 --------PEEPHLSPRPEEPHLSPQAEEPHLSPQP-EEPCLCAVPEEPHLSPQAEGPHL 797
Query: 811 AEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGP--GPMGQASWMWTLPRGPRWAHGPG 868
+ + + L + +T+ L P+ P P + S + P + P
Sbjct: 798 SPQPEELHLS----------PQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPE 847
Query: 869 HRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHC 928
HL +K P P+P+ + C A + LP PP EP
Sbjct: 848 ESHLSPELEKPPLSPRPEKPPEEPGQCPAPE-------------ELPLFPPPGEP----- 889
Query: 929 SSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADADVPTS 988
S S L S PP PL S P L P +P PP +
Sbjct: 890 SLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPP 949
Query: 989 GVAPDGIPERP 999
++P G E P
Sbjct: 950 ALSPLGELEYP 960
Score = 47.8 bits (112), Expect = 5e-05
Identities = 74/303 (24%), Positives = 101/303 (33%), Gaps = 45/303 (14%)
Query: 734 SEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPAS-SLQPP 792
SEA+ G G P T E + + PS S +L + P P+S LQPP
Sbjct: 4035 SEATEGPSTHQGGPLAIGTTPESMATEPGEVKPSLSGDSQLLLVQPQPQPQPSSLQLQPP 4094
Query: 793 CHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVN-RLGRRPQGPGPMGQA 851
QQ++ L A +L + + A V + Q + LG +P G
Sbjct: 4095 LRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEASSVPHLLAQPSVSLGDQP------GSM 4148
Query: 852 SWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARR- 910
+ P+ P + P + GP + L G G G L+ +G +
Sbjct: 4149 TQNLLGPQQPMLERPMQNNTGPQPPKPGPVLQSGQGLPGVGIMPTVGQLRAQLQGVLAKN 4208
Query: 911 --ARPLPPD----------------------APPAEPPGLHCSSSQQLLSSTPSC--HAA 944
R L P PP + PG S Q LL P
Sbjct: 4209 PQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGTQTSPLQGLLGCQPQLGGFPG 4268
Query: 945 PPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADADV--PTSGVAPDGIPERPKEP 1002
P PL G + PP +PA PP A + V P P P+ PK P
Sbjct: 4269 PQTGPLQELGAGPRPQGPPRLPA--------PPGALSTGPVLGPVHPTPPPSSPQEPKRP 4320
Query: 1003 SSL 1005
S L
Sbjct: 4321 SQL 4323
Score = 39.7 bits (91), Expect = 0.015
Identities = 145/619 (23%), Positives = 199/619 (32%), Gaps = 140/619 (22%)
Query: 375 QAASASSSPLEALEACLKGIP--PNGSSPSQ----LPPTSCSQNPQ-PGDSRSQKPELQP 427
Q + S P A G P P G S S PP P PG+ + P P
Sbjct: 2109 QPGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGELFLKLPPQVP 2168
Query: 428 HRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQ 487
+ S++ P GL P P AP P S + + G+
Sbjct: 2169 AQVPSQD-------PFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAG 2221
Query: 488 HPGK--GSPPGSSPLQGLENCLKEIPVPVLRPAWPC-------SSAADRGPRRAEP---- 534
PG+ +PPG+ Q P P L+P P S G + +EP
Sbjct: 2222 QPGEFHTTPPGTPRHQ------PSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSP 2275
Query: 535 -------RNWTADKEGLRAEACESARLGQGRGEAPTRSLHL-----VSPQVFTSSCVPAC 582
+ KE L A + G ++P+ HL +P VF + P
Sbjct: 2276 PPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRA 2335
Query: 583 HQRGFKDPG-ATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPS 641
Q + PG RP + P A PSP P P F
Sbjct: 2336 SQVEPQSPGLGLRP---QEPPPAQALAPSP------------PSHPDIFR---------- 2370
Query: 642 PGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCK-PPVPLSPCPGGTPAGSSGGSPGE 700
PGS + PRP+P P P+ LP P P S P + SS SP
Sbjct: 2371 PGSYTDPYAQPPLTPRPQP----PPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLT 2426
Query: 701 DPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQ 760
+ +C Q P P S+ RP+ + L H PR PQ
Sbjct: 2427 PRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPL---HKPPR----------PQ 2473
Query: 761 GPPELPSESP------------PPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGA 808
PPE+ ++ P LP A S QPP P GA
Sbjct: 2474 -PPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVPSGQPPNFVRSP------GTGA 2526
Query: 809 ALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQ-------GPGP-MGQASWMWTLPRG 860
+ T + + +++ V + G P GPGP +G+ P+
Sbjct: 2527 FVGTPSPMRFTFPQAVGE--PSLKPPVPQPGLPPPHGINSHFGPGPTLGK-------PQS 2577
Query: 861 PRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPP 920
+ G+ H P GP+ S G+ GLS R LPP AP
Sbjct: 2578 TNYTVATGNFH-PSGSPLGPS------------SGSTGESYGLS--PLRPPSVLPPPAPD 2622
Query: 921 AEPPGLHCSSSQQLLSSTP 939
P L +SQ+ ++P
Sbjct: 2623 GSLPYLSHGASQRSGITSP 2641
Score = 38.5 bits (88), Expect = 0.033
Identities = 116/442 (26%), Positives = 148/442 (33%), Gaps = 89/442 (20%)
Query: 85 SPESESRGASLDGERA--SPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSG 142
SPE E S E+ P A E PL P G S L P S
Sbjct: 852 SPELEKPPLSPRPEKPPEEPGQCPAPEELPLFP-----PPGEPSLSPLLGEPALSEPGEP 906
Query: 143 PTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSP------SRRKSHRGQ-ERG 195
P SPLP + P P + +P PP SP S G+ E
Sbjct: 907 PL------SPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYP 960
Query: 196 TSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPL---PSLGTSRLTRADLGPG 252
G S SPL I L+ + P P T P +PP+ PS G+ +GP
Sbjct: 961 FGAKGDSDPESPLAAPI--LETPISPPPEANCTDPEPVPPMILPPSPGSP------VGPA 1012
Query: 253 SPPWAVKTEAVSGDC-PLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGP 311
SP + E + C PL L H L Q+ PS P
Sbjct: 1013 SP---ILMEPLPPQCSPL--LQHSLVP----QNSPPSQCS-------------------P 1044
Query: 312 GYLLTPPPHPDLGAGGLLSV-------KMENSWVQSPPGPASCQPGRQPLSPSATGDTRG 364
L P P G ++ V +ME V P PA PL PS GD
Sbjct: 1045 PALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSPL-PSPMGDL-S 1102
Query: 365 VPQPSWGPEAQAASA---SSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQ 421
P PS P S ++PL+ ++A P + P Q P + S+ G
Sbjct: 1103 CPAPSPAPALDDFSGLGEDTAPLDGIDA-----PGSQPEPGQTPGSLASE--LKGSPVLL 1155
Query: 422 KPE-LQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGS 480
PE L P + G ++ P P+AP TP + S D +
Sbjct: 1156 DPEELAPVTPMEVYPECKQTAGQGSPCEEQEEPRAPVAP--TPPTLIKS-------DIVN 1206
Query: 481 PVGNQGQHPGKGSPPGSSPLQG 502
+ N Q S PGS PL G
Sbjct: 1207 EISNLSQGDASASFPGSEPLLG 1228
Score = 37.7 bits (86), Expect = 0.056
Identities = 102/427 (23%), Positives = 138/427 (32%), Gaps = 89/427 (20%)
Query: 167 EGPGALGGEPSPPTHSPSR-RKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRH 225
E PG GG+ S P SP +S + E E G S
Sbjct: 2259 ESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGAS----------------------- 2295
Query: 226 PETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDR 285
SPS+ PP S + LG +KT V PL P A
Sbjct: 2296 ---SPSYGPPNLGFVDSPSSGTHLG----GLELKTPDVF-KAPL---------TPRASQV 2338
Query: 286 HPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWV---QSPP 342
P G+G R QE P A +PP HPD+ G + + PP
Sbjct: 2339 EPQSPGLG-LRPQEPPPA-------QALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPP 2390
Query: 343 GPASC---QPGRQPLSPSATGDTRGVPQPSWGPEAQAASAS---SSPLEALEACLKGIPP 396
P SC P P P + VP P++Q++S S PL A C + P
Sbjct: 2391 PPESCCALPPRSLPSDPFSR-----VPA---SPQSQSSSQSPLTPRPLSAEAFCPSPVTP 2442
Query: 397 NGSSPSQLP-PTSCSQNPQPGDSRSQKPELQPHR--SHSEEATREPVLPLGLQSCVRDGP 453
SP P S Q+ P + P QP + + G + + GP
Sbjct: 2443 RFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGP 2502
Query: 454 SRPL---APRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEI 510
+ L P G P +F S T G+P + P P P +
Sbjct: 2503 AGELHAKVPSGQPPNFVRSPGT--GAFVGTPSPMRFTFPQAVGEPSLKP---------PV 2551
Query: 511 PVPVLRPAWPCSSAADRGPRRAEPR--NWTADKEGLRAEAC----ESARLGQGRGEAPTR 564
P P L P +S GP +P+ N+T S G+ G +P R
Sbjct: 2552 PQPGLPPPHGINSHFGPGPTLGKPQSTNYTVATGNFHPSGSPLGPSSGSTGESYGLSPLR 2611
Query: 565 SLHLVSP 571
++ P
Sbjct: 2612 PPSVLPP 2618
Score = 37.7 bits (86), Expect = 0.056
Identities = 79/326 (24%), Positives = 110/326 (33%), Gaps = 56/326 (17%)
Query: 221 PGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELP 280
PGP PE P PP RL A + P P + C ++ P
Sbjct: 3091 PGPLGPEERP---PPAADASEPRL--ASVLPEVKPKVEEGGRHPSPCQFTIATPKVEPAP 3145
Query: 281 EAQDR----HPSPSGVGNRRLQENPGAWKRGS------------GGPGYLLTPPPHPDLG 324
A P S +G+R + G + G P +LLTP P G
Sbjct: 3146 AANSLGLGLKPGQSMMGSRDTRMGTGPFSSSGHTAEKASFGATGGPPAHLLTPSPLSGPG 3205
Query: 325 AGGLL-SVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSP 383
LL ++E+ + P GPA A+GD + S AS P
Sbjct: 3206 GSSLLEKFELESGALTLPGGPA------------ASGDELDKMESS-------LVASELP 3246
Query: 384 L---EALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKP-----ELQPHRSHSEE- 434
L + LE K + +QL P Q Q S P PH S
Sbjct: 3247 LLIEDLLEHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAPGPAQAMSLPHEGSSPSL 3306
Query: 435 ATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGN--QGQHPGKG 492
A + L LGL + G +PL P P + + + S G+ GQH G+
Sbjct: 3307 AGSQQQLSLGLAGARQPGLPQPLMPT-QPPAHALQQRLAPSMAMVSNQGHMLSGQHGGQA 3365
Query: 493 SPPGSSPLQGLENCLKEIPVPVLRPA 518
G P Q + L + P+ + P+
Sbjct: 3366 ---GLVPQQSSQPVLSQKPMGTMPPS 3388
Score = 36.6 bits (83), Expect = 0.13
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 719 QDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSE-SPPPE---- 773
++P P+ Q E +P G++L P++ A +E + P PP S SPPPE
Sbjct: 407 KEPGPL-QCEAKPL---GKAGVQL---EPQLEAPLNEEM-PLLPPPEESPLSPPPEESPT 458
Query: 774 LPPPEAA-----PPVLPASSLQPPCHCGKPLQQ 801
PPPEA+ P LPAS L H +PL++
Sbjct: 459 SPPPEASRLSPPPEELPASPLPEALHLSRPLEE 491
Score = 36.6 bits (83), Expect = 0.13
Identities = 66/253 (26%), Positives = 87/253 (34%), Gaps = 70/253 (27%)
Query: 176 PSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPP 235
P PP P + +G GI P L+ L+ +L P+ SP
Sbjct: 4170 PQPPKPGPVLQSG-----QGLPGVGIMPTVGQLRAQ---LQGVLAKNPQLRHLSPQQQQQ 4221
Query: 236 LPSLGTSR-LTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGN 294
L +L R L ++ +PP+ E + PLQGLL C +L P
Sbjct: 4222 LQALLMQRQLQQSQAVRQTPPYQ---EPGTQTSPLQGLLGCQPQLGGFPGPQTGP----- 4273
Query: 295 RRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPL 354
LQE GA R G PP P +PPG S P P+
Sbjct: 4274 --LQEL-GAGPRPQG-------PPRLP------------------APPGALSTGPVLGPV 4305
Query: 355 SPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQ 414
P+ P PS E + S SP L + +QLPPT
Sbjct: 4306 HPT--------PPPSSPQEPKRPSQLPSPSSQLP-----------TEAQLPPT------H 4340
Query: 415 PGDSRSQKPELQP 427
PG + Q P L+P
Sbjct: 4341 PGTPKPQGPTLEP 4353
Score = 35.8 bits (81), Expect = 0.21
Identities = 178/803 (22%), Positives = 248/803 (30%), Gaps = 140/803 (17%)
Query: 28 PGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLHLTALVQLVKEIPEFLFGEVKGAMDSPE 87
PG GG + +P G P G L + +L K + L K + S
Sbjct: 1844 PGPEDGGVKASPVPSDPEKPGTPGEGMLSSDLDRISTEELPKMESKDLQQLFKDVLGSER 1903
Query: 88 SESRGAS---LDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPT 144
+ G L+G R + + PL L S P S P L +P S G
Sbjct: 1904 EQHLGCGTPGLEGSRTPLQRPFLQGGLPLGNLPSSSP--MDSYPGLCQSPFLDSRERGGF 1961
Query: 145 GDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPG 204
G P D PW G+ G PS PT + + G+S
Sbjct: 1962 FSPEPGEP------DSPWT------GSGGTTPSTPTTPTTEGEGD----------GLSYN 1999
Query: 205 NSPLQ--------GLINCLKEILVPGPRHPETSPSFLPPLPSLGTS--RLTRADLGPGSP 254
LQ G ++ + +L P + P S +L R
Sbjct: 2000 QRSLQRWEKDEELGQLSTISPVLYANINFPNLKQDY-PDWSSRCKQIMKLWRKVPAADKA 2058
Query: 255 PWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYL 314
P+ K + D ++ +++ E+Q + G R+ + P R PG L
Sbjct: 2059 PYLQKAK----DNRAAHRINKVQKQAESQINKQTKVGDIARKT-DRPALHLRIPPQPGAL 2113
Query: 315 LTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPS----- 369
+PPP ++ SP PA G G P
Sbjct: 2114 GSPPP-----------AAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGELFLK 2162
Query: 370 WGPEAQAASASSSPLEA-----LEACLKGIPPN-------GSSPSQLPPTSCSQNP---Q 414
P+ A S P LE PP +P+Q P S P Q
Sbjct: 2163 LPPQVPAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQ 2222
Query: 415 PGDSRSQKPELQPHRSHSEEATREPVLP----LGLQSCVRDGPSRPLAPRGTPTSFSSSS 470
PG+ + P H+ + + +P P L + G + P +P F S
Sbjct: 2223 PGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGESR 2282
Query: 471 ST----DWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAAD 526
+L SP SP + L GLE + P P P +S
Sbjct: 2283 KALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLE---LKTPDVFKAPLTPRAS--- 2336
Query: 527 RGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRG 586
+ EP++ GLR + A+ AP+ H P +F
Sbjct: 2337 ----QVEPQS---PGLGLRPQEPPPAQ-----ALAPSPPSH---PDIFRPG--------S 2373
Query: 587 FKDPGATRPGVWRWLPEGSAPKPS-----PLHCLESALRGILPVRPLRFACVGGPSPSPS 641
+ DP A P P P P P L S +P P + P +P
Sbjct: 2374 YTDPYAQPP----LTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPL-TPR 2428
Query: 642 PGSSSSFSGSEGEDPRPEPDLWK---PLPQERDRL-PSCKPPVPLSP---CPGGTPAGSS 694
P S+ +F S PD + PQ RD P KPP P P G+ A +S
Sbjct: 2429 PLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTS 2488
Query: 695 GGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTH 754
G+ G P AG P Q P S G G P T
Sbjct: 2489 LGAGGF------PAALPAGPAGELHAKVPSGQ----PPNFVRSPGTGAFVGTPSPMRFTF 2538
Query: 755 ERLLPQGPPELPSESPPPELPPP 777
+ + G P L P P LPPP
Sbjct: 2539 PQAV--GEPSLKPPVPQPGLPPP 2559
Score = 35.4 bits (80), Expect = 0.28
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 27/89 (30%)
Query: 759 PQGPPELPSE---------------SPPPELPPPEAAPPVLPASSLQ-------PPCHCG 796
PQGPP LP+ +PPP P P LP+ S Q PP H G
Sbjct: 4283 PQGPPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPG 4342
Query: 797 KPLQQELHSLGAALAEKLDRLATALAGLA 825
P Q G L R++ A A LA
Sbjct: 4343 TPKPQ-----GPTLEPPPGRVSPAAAQLA 4366
Score = 33.5 bits (75), Expect = 1.1
Identities = 66/293 (22%), Positives = 93/293 (31%), Gaps = 71/293 (24%)
Query: 169 PGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPET 228
PG+ G EPS P +S G +P G ++
Sbjct: 2717 PGSWGAEPSSPAFEQ-----------------LSRGQTPFAGT-------------QDKS 2746
Query: 229 SPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPS 288
S LPP S+L+ LGPGS P S D + P A PS
Sbjct: 2747 SLVGLPP------SKLSGPILGPGSFP--------SDD-------RLSRPPPPAT---PS 2782
Query: 289 PSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQ 348
V +R+L A+ + + PG L L + + S P++
Sbjct: 2783 SMDVNSRQLVGGSQAFYQRAPYPGSLPLQQQQQQLWQQQQATAATSMRFAMSARFPSTPG 2842
Query: 349 P--GRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPP 406
P GRQ L G + +P P G + + +E KG+ P G+
Sbjct: 2843 PELGRQALGSPLAGISTRLPGP--GEPVPGPAGPAQFIELRHNVQKGLGPGGT------- 2893
Query: 407 TSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP 459
P PG Q+P P E + L + PS P AP
Sbjct: 2894 ------PFPGQGPPQRPRFYPVSEDPHRLAPEGLRGLAVSGLPPQKPSAPPAP 2940
Score = 32.7 bits (73), Expect = 1.8
Identities = 45/153 (29%), Positives = 56/153 (36%), Gaps = 32/153 (20%)
Query: 644 SSSSFSGSEGEDPRPEPDLWK-----PLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSP 698
+S F+ S P P+L + PL RLP P P PG PAG +
Sbjct: 2827 TSMRFAMSARFPSTPGPELGRQALGSPLAGISTRLPG-----PGEPVPG--PAGPA---- 2875
Query: 699 GEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLL 758
+ E R+ G G P P +RPR S R+A + L
Sbjct: 2876 ----QFIELRHNVQKGLGPGGTPFPGQGPPQRPRFYPVSEDPH------RLAPEGLRGLA 2925
Query: 759 PQG-PPELPSESPPPEL-----PPPEAAPPVLP 785
G PP+ PS P PEL P P P LP
Sbjct: 2926 VSGLPPQKPSAPPAPELNNSLHPTPHTKGPTLP 2958
Score = 30.8 bits (68), Expect = 6.9
Identities = 37/146 (25%), Positives = 53/146 (36%), Gaps = 11/146 (7%)
Query: 660 PDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQ 719
P+ ++ L E +P + PGG G G SP P + ++ + L T +
Sbjct: 4812 PNSYEVLFPESPARAGTEPKKGEAEGPGGKEKGLEGKSPDTGPDWLK-QFDAVLPGYTLK 4870
Query: 720 DPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEA 779
+ L K+ + H + R L PPE PS P P P P A
Sbjct: 4871 SQLDILSLLKQESPAPEP---PTQHSYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSP-A 4926
Query: 780 APPVLPASSL------QPPCHCGKPL 799
+PP P L +PP PL
Sbjct: 4927 SPPTEPLVELPTEPLAEPPVPSPLPL 4952
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 73.6 bits (179), Expect = 9e-13
Identities = 174/724 (24%), Positives = 236/724 (32%), Gaps = 91/724 (12%)
Query: 1 MRENYETLVSVGTAELLPLSAFLSPSEPGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLH 60
+R + E V+ G A P + LS G G P G P R S
Sbjct: 134 LRISAEETVARGKATEAPKRSALS--------AGARRDTSGPTP---GTPSPAMARRSRA 182
Query: 61 LTALVQLVKEIPEFLFGEVKGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCL 120
V L + P + + P AS + P AA R P GL
Sbjct: 183 AGTEVGLPRPAPS---ARPRPPTEGPRKSVSSAS-EHSTTEPSPAARRRPSAGGGL---- 234
Query: 121 PDGPTSQP-HLATTPTDSSCSSGPTGDGVQGSP----------LPIKTADKPWPTRKEGP 169
P S+ + TP S SGP+ G +P L + P RK+
Sbjct: 235 -QRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAA 293
Query: 170 GALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVP-GPRHPET 228
ALG S P +PS + + Q T A +P + C +P P P
Sbjct: 294 PALGPLSSSPLATPSPSAALQSQAPPTLPA------TPHSSSLTCQLATPLPLAPPSPSA 347
Query: 229 SPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPS 288
PS L LPS + ++A GSP T + PL L + P A P
Sbjct: 348 PPS-LQTLPSPPATPPSQATTSLGSPTLQA-THSFLPSPPLSPLATPPPQAPPALALPP- 404
Query: 289 PSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGP---- 344
LQ P P L TP P A L+V + + PP P
Sbjct: 405 --------LQAPPSPPASPPLSP--LATPSPQ----APNALAVHLLQAPFSPPPSPPVQA 450
Query: 345 ASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQL 404
P P+SPSAT ++ P + P S +SP + A PP P
Sbjct: 451 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT---PPPQAPPPLAA 507
Query: 405 PPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPT 464
PP ++ P P LQ A P Q+ S P++P TP
Sbjct: 508 PPLQLAKPPPQAPPALATPPLQ--------ALPSPPASFPGQAPFSPSASLPMSPLATPP 559
Query: 465 SFSSS--SSTDWDLDFGSPVGNQGQHPGKGSPPG-SSPLQGLENCLKEIPVPVLRPAWPC 521
+ ++ + P Q P + PG + + G L P P P+
Sbjct: 560 PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 619
Query: 522 SSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPA 581
SS + T+ E LR +S G P P ++C PA
Sbjct: 620 SSTLSGPDLAGHSSSATSTPEELR--GYDSGPEGGAAASPP--------PDAELAACHPA 669
Query: 582 CHQRGFKDPGATR--PGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPS 639
RG P A R PG P + P + C G P A GPSP
Sbjct: 670 AWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG 729
Query: 640 PSPGSSSSFSGSEGEDPRPEPDLWKPLP----QERDRLPSCKPPVPLSPCPGGTPAGSSG 695
S G +++ +G+ P+ LP Q + L+ G AG SG
Sbjct: 730 TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGA--AGGSG 787
Query: 696 GSPG 699
G PG
Sbjct: 788 GGPG 791
Score = 63.2 bits (152), Expect = 1e-09
Identities = 198/803 (24%), Positives = 252/803 (31%), Gaps = 195/803 (24%)
Query: 221 PGPRHPETSPSFLPPLPSLGTS-RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKEL 279
PG P S PP P + R+ A G P A + + G +
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG-----------ATI 70
Query: 280 PEAQDRH-PSPS-GVGNRRLQENPGAWKRGSGGPGYLLTPP--------------PHPDL 323
PE+ R P+ S G +R P A RG P T P P P L
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP-L 129
Query: 324 GAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSP 383
G GL + E + + G A+ P R LS A DT G P P A A + ++
Sbjct: 130 GQKGL-RISAEETVAR---GKATEAPKRSALSAGARRDTSG-PTPGTPSPAMARRSRAAG 184
Query: 384 LEALEACLKGIPPNGSSPSQLPPT--------SCSQNP--QPGDSRSQKPE----LQPHR 429
E G+P S PPT S S++ +P + ++P LQ
Sbjct: 185 TEV------GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA 238
Query: 430 SHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHP 489
S S ++ P L S R GPS RGTP + + S P G Q P
Sbjct: 239 SRSLSSSATP-----LSSPARSGPSA----RGTPRAPAHPSQP-------KPKGLQALRP 282
Query: 490 GKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEAC 549
+ +PP L P+ P+ P ++ + P T L +
Sbjct: 283 PQVTPPRKDAAPALGPLSSS---PLATPS-PSAALQSQAPPTLPA---TPHSSSLTCQLA 335
Query: 550 ESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKP 609
L AP L SP S Q T +LP +P
Sbjct: 336 TPLPLAPPSPSAPPSLQTLPSPPATPPS------QATTSLGSPTLQATHSFLP---SPPL 386
Query: 610 SPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQE 669
SPL L + PL+ PSP SP S + P P L
Sbjct: 387 SPLATPPPQAPPALALPPLQ----APPSPPASPPLSPLAT--------PSPQAPNALAVH 434
Query: 670 RDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEK 729
+ P PP P P PA SP P T P A P Q+
Sbjct: 435 LLQAPFSPPPSPPVQAPFSPPA-----SPPVSPSATPPSQAPPSLAA------PPLQVPP 483
Query: 730 RPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPAS-- 787
P P PP PS +PPP+ PPP AAPP+ A
Sbjct: 484 SP---------------------------PASPPMSPSATPPPQAPPPLAAPPLQLAKPP 516
Query: 788 SLQPPCHCGKPLQ-----------QELHSLGAALAEKLDRLATALAGLAQEVATMRTQVN 836
PP PLQ Q S A+L + LAT +A QV
Sbjct: 517 PQAPPALATPPLQALPSPPASFPGQAPFSPSASL--PMSPLATPPPQAPPVLAAPLLQVP 574
Query: 837 ---------RLGRRPQGPGPMGQASWMWTLPRGPR--WAHGPGHRHLPYWRQKGPTRPKP 885
+ RRP PGP S GPR A PG P P
Sbjct: 575 PSPPASPTLQAPRRPPTPGPDTSVS-------GPRLTLALAPG--------------PPP 613
Query: 886 KILRGQGESCRAGDLQGLSRGTARRARPL------PPDAPPAEPPGLHCSSSQQLLSSTP 939
R + DL G S L P A PP +L + P
Sbjct: 614 PPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP-----PDAELAACHP 668
Query: 940 SCHAAPPAHPLLAHTGGHQSPLP 962
+ + PA P LA G +PLP
Sbjct: 669 AAWSRGPAPP-LAFRGAPGAPLP 690
Score = 54.3 bits (129), Expect = 6e-07
Identities = 187/719 (26%), Positives = 243/719 (33%), Gaps = 141/719 (19%)
Query: 321 PDLGAGGLLSVKMENSWVQSPP-GPASCQP-------GRQPLSPSATG-DTRGVPQ--PS 369
P A GLL+ + S PP PA+ + GR+PL+ A G +P+ P
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 370 WGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHR 429
GP A ++S +P PP + PP ++N PG P P R
Sbjct: 77 AGPTRSAGTSSRNPASR--------PPASGRGERAPP---AKNTSPG------PVSSPGR 119
Query: 430 SHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHP 489
+ T P PLG Q +R +A RG T S+ L G+ G P
Sbjct: 120 A---SGTTRPG-PLG-QKGLRISAEETVA-RGKATEAPKRSA----LSAGARRDTSGPTP 169
Query: 490 GKGSPPGS--SPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAE 547
G SP + S G E L P P RP P GPR++ ++ E E
Sbjct: 170 GTPSPAMARRSRAAGTEVGLPR-PAPSARPRPPTE-----GPRKSV----SSASEHSTTE 219
Query: 548 ACESAR----LGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPE 603
+AR G G +RSL +SS P G + G R
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSL--------SSSATPLSSPAR---SGPSARGTPRAPAH 268
Query: 604 GSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLW 663
S PKP L ALR P + A +P+ P SSS + P P L
Sbjct: 269 PSQPKPKGLQ----ALRPPQVTPPRKDA-----APALGPLSSSPLA-----TPSPSAALQ 314
Query: 664 KPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCP 723
P P +P +P + P P + P L + A P
Sbjct: 315 SQAP----------PTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPP-- 362
Query: 724 VSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPV 783
S+A+ L G P + A TH L PP P +PPP+ PP A PP+
Sbjct: 363 ----------SQATTSL----GSPTLQA-THSFL--PSPPLSPLATPPPQAPPALALPPL 405
Query: 784 LPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQ 843
PP P L L + + LA L A + + P
Sbjct: 406 QA-----PP---SPPASPPLSPLATPSPQAPNALAVHLLQ-----APFSPPPSPPVQAPF 452
Query: 844 GPGPMGQASWMWTLP-RGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQ- 901
P S T P + P P + P P P A LQ
Sbjct: 453 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQL 512
Query: 902 GLSRGTARRARPLPP----DAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGH 957
A A PP +PPA PG S L +P P A P+LA
Sbjct: 513 AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLA----- 567
Query: 958 QSPL---PPLVPAALPLQG-ASPPAASADADVP----TSGVAPDGIPERPKEPSSLLGG 1008
+PL PP PA+ LQ PP D V T +AP P + PSS L G
Sbjct: 568 -APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSG 625
Score = 37.4 bits (85), Expect = 0.073
Identities = 87/347 (25%), Positives = 111/347 (31%), Gaps = 47/347 (13%)
Query: 672 RLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRP 731
R P+ + P L+P P G+P P P LGA A P+++
Sbjct: 15 RTPAARAPGLLTPRPPGSP---------RPPPPVTPAALRVLGAAGAVGRKPLAER---- 61
Query: 732 RVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP 791
+ G + PR + P P S E PP P SS P
Sbjct: 62 --AGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSS--P 117
Query: 792 PCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRR-PQGPGPMGQ 850
G L G ++ + T G A E A R+ ++ RR GP P
Sbjct: 118 GRASGTTRPGPLGQKGLRISAE----ETVARGKATE-APKRSALSAGARRDTSGPTPGTP 172
Query: 851 ASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARR 910
+ M R G LP R RP+P + A + A R
Sbjct: 173 SPAMARRSRAAGTEVG-----LP--RPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAAR 225
Query: 911 ARPLPPDAPPAEPPGLHCSSSQQLLSST----PSCHAAP--PAHPLLAHTGGHQSPLPPL 964
RP P SSS LSS PS P PAHP G Q+ PP
Sbjct: 226 RRP-SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ 284
Query: 965 V--------PAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
V PA PL +S P A+ AP +P P S
Sbjct: 285 VTPPRKDAAPALGPL--SSSPLATPSPSAALQSQAPPTLPATPHSSS 329
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 72.4 bits (176), Expect = 2e-12
Identities = 216/932 (23%), Positives = 292/932 (31%), Gaps = 182/932 (19%)
Query: 121 PDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPT 180
P G + +P + D+ P GVQG P P K + GP L G P
Sbjct: 429 PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPP---- 484
Query: 181 HSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLG 240
G+ G G PG + G E PGP P+ SP G
Sbjct: 485 ----------GERGGPGSRGF-PGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAG 533
Query: 241 TSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQEN 300
PGSP KT P QD P P G R Q
Sbjct: 534 LPGAKGLTGSPGSPGPDGKTGPPG---------------PAGQDGRPGPPGPPGARGQAG 578
Query: 301 ----PGAWKRGSGGPGYL---LTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQP 353
PG K +G PG P P +G G K + Q PPGPA R
Sbjct: 579 VMGFPGP-KGAAGEPGKAGERGVPGPPGAVGPAG----KDGEAGAQGPPGPAGPAGERGE 633
Query: 354 LSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNP 413
P+ + +G+P P+ GP +A +G+P + +P P + +
Sbjct: 634 QGPAGSPGFQGLPGPA-GPPGEAGKPGE----------QGVPGDLGAPG--PSGARGERG 680
Query: 414 QPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTD 473
PG+ Q GP P PRG
Sbjct: 681 FPGERGVQ------------------------------GPPGPAGPRGAN---------- 700
Query: 474 WDLDFGSPVGNQGQHPGKGSP--PGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRR 531
G+P GN G G+P PGS GL+ E L P D GP+
Sbjct: 701 -----GAP-GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGL--PGPKGDRGDAGPKG 752
Query: 532 AEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPG 591
A+ + K+G+R G G + S + A RG +PG
Sbjct: 753 AD---GSPGKDGVRGLTGPIGPPGPA-GAPGDKGESGPSGPAGPTGARGAPGDRG--EPG 806
Query: 592 ATRPGVWRWLPEGSAPKPSPLHCLESALRGIL-PVRPLRFACVGGPSPSPSPGSSSSFSG 650
P + P + ++ +G P P GP+ P P + G
Sbjct: 807 PPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP------AGPAGPPGPIGNVGAPG 860
Query: 651 SEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPR-RTEPRY 709
++G P P R+ PP P P G +G G+ PR T P
Sbjct: 861 AKGARGSAGPPGATGFPGAAGRV---GPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAG 917
Query: 710 CSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-----QGPPE 764
G G P P EK ++ G G +A + LP +G P
Sbjct: 918 RPG-EVGPPGPPGPAG--EKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG 974
Query: 765 LPSESPPPELPPPEAAP-------PVLPASSLQPPCHCGK---PLQQELHSLGAALAEKL 814
LP S P P A P+ P PP G+ P + + K
Sbjct: 975 LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKG 1034
Query: 815 DRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMW----TLPRGPRWAHGPGHR 870
DR T AG P PGP+G A T P GP GP
Sbjct: 1035 DRGETGPAGPPGAPGA-----------PGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGA 1083
Query: 871 HLPYWRQKGPTRPKPKILRGQGESCRAGD--LQGLSRGTARRARPLPPDAPPAEPPGLHC 928
P GP P+ +GE+ GD ++G + + P PP +P + P
Sbjct: 1084 RGP----AGPQGPR----GDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPS--- 1132
Query: 929 SSSQQLLSSTPSCHAAPPAH---PLLAHTGGHQSPLPPLVPA-----ALPLQGASPPAAS 980
+S P+ PP P G P+ P P A P+ PP
Sbjct: 1133 ------GASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPP 1186
Query: 981 ADADVPTSGVAPDGIPERPKEPSSLLGGVQRA 1012
P++G +P+ P+E + G RA
Sbjct: 1187 GPPGPPSAGFDFSFLPQPPQEKAHDGGRYYRA 1218
Score = 31.2 bits (69), Expect = 5.3
Identities = 43/158 (27%), Positives = 50/158 (31%), Gaps = 23/158 (14%)
Query: 24 SPSEPGRAVGGGSHADEGQE-PAGCGDPQGGQPRHSLHLTALVQLVKEIPEFLFGEVKGA 82
+P PG G D G+ PAG P G + A + P GE
Sbjct: 1050 APGAPGPVGPAGKSGDRGETGPAGPAGPVGP-------VGARGPAGPQGPRGDKGETGEQ 1102
Query: 83 MDSPESESRGAS-LDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSS 141
D RG S L G P + + P G P GP P A
Sbjct: 1103 GDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASG-----PAGPRGPPGSA---------G 1148
Query: 142 GPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPP 179
P DG+ G P PI T GP G P PP
Sbjct: 1149 APGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPP 1186
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 70.1 bits (170), Expect = 1e-11
Identities = 220/964 (22%), Positives = 332/964 (34%), Gaps = 212/964 (21%)
Query: 149 QGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPL 208
+G P P+K A +P + P AL G SP ++ RG + + G+ PG PL
Sbjct: 192 RGGP-PVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKR-RRGCN--SEQTGLPPG-LPL 246
Query: 209 QGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS---RLTRADLGPG--SPPWAVKTEAV 263
P P P P PPLP L TS +LT+ L W + +
Sbjct: 247 PP---------PPLPPPPPPPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERK-- 295
Query: 264 SGDCPLQ------GLLHCLKELPEAQDRHPSPSGVGNRRLQE---NPGAWKRGSGGPGYL 314
G P + L H A HP G+R + PG G+ G L
Sbjct: 296 -GSAPPERQEQRHSLPHPYPYPAPAYTAHPP----GHRLVPAAPPGPGPRPPGAESHGCL 350
Query: 315 -LTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDT----------- 362
T PP DL + +M++S SP +C P P G T
Sbjct: 351 PATRPPGSDLRESRVQRSRMDSS--VSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNT 408
Query: 363 --RGV-PQPS----------------WGPEAQAASASSSPLEALEACLK--GIPPNGSSP 401
RGV P P G +A +S P A +PP SSP
Sbjct: 409 GLRGVEPNPGIPGADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSP 468
Query: 402 SQLPPTSCSQ--NPQPGDSRSQKPELQPHRSHSEE------ATREPVLPLGLQSCVRDGP 453
PP C + P P + + P + R E T P P R+G
Sbjct: 469 ---PPPPCPRLLRPPPPPAWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGF 525
Query: 454 SRPLAPR---GT---------PTSFSSSSSTDWDLDFGSPVGNQGQHP----GKGSPPGS 497
P A R GT PT +SSS+++ SP G P + P
Sbjct: 526 LGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLP 585
Query: 498 SPLQGLENCLKEIPVPV---LRPAWPCS-----SAADRGPRRAEPR-NWTADKE------ 542
P +N VP+ L PA P S S + R P PR ++ E
Sbjct: 586 RPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPP 645
Query: 543 -GLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWL 601
G ++A + + G GE P R P++F P Q F++P ++ L
Sbjct: 646 PGPLSKAPQP--VPPGVGELPARG-----PRLFDFPPTPLEDQ--FEEPAE-----FKIL 691
Query: 602 PEGSAPKPSPLHCLESALR----------GILPVRPLR--FACVGGPSPSPSPGSSSS-- 647
P+G A + + L+ ++R G+ P PL+ FA + P P+ + ++++
Sbjct: 692 PDGLA---NIMKMLDESIRKEEEQQQHEAGVAPQPPLKEPFASLQSPFPTDTAPTTTAPA 748
Query: 648 ------------FSGSEGEDPRPEPDLWKPLPQERDRLPSC-KPPVPLSPCPGGTPAGSS 694
+ ++ E+ +P P L P P + PS +PP P P P +
Sbjct: 749 VAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLA 808
Query: 695 GGSPGEDPRRTEPRYC-SGLGAGTAQDPCPVSQLEKRPRVSEASRGLE------LGHGRP 747
G+ +YC G GA + P P+ + P + L G P
Sbjct: 809 SVLEGQ-------KYCYRGTGAAVSTRPGPLPTTQYSPGPPSGATALPPTSAAPSAQGSP 861
Query: 748 RVAAKTHERLLPQGPP----ELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQEL 803
+ +A + + G P E P P P PP L PP + +E+
Sbjct: 862 QPSASSSSQFSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSL----PPARSESEVLEEI 917
Query: 804 HSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRW 863
L E++ R AT A + RL Q G + + + +
Sbjct: 918 SRACETLVERVGRSATDPADPVDTAEPADSGTERLLPPAQAKEEAGGVAAVSGSCKRRQK 977
Query: 864 AHGPGHRH--------LPYWRQKGPTRPKPKILRGQGE------SCRAGDLQGLSR---- 905
H HR + ++G + K K+ + + ++ ++QG +
Sbjct: 978 EHQKEHRRHRRACKDSVGRRPREGRAKAKAKVPKEKSRRVLGNLDLQSEEIQGREKSRPD 1037
Query: 906 -GTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPL 964
G A +A+P APP+ P PS PP+ + ++P PP
Sbjct: 1038 LGGASKAKPPTAPAPPSAP--------------APSAQPTPPSASVPGKKAREEAPGPPG 1083
Query: 965 VPAA 968
V A
Sbjct: 1084 VSRA 1087
Score = 59.3 bits (142), Expect = 2e-08
Identities = 238/1009 (23%), Positives = 314/1009 (31%), Gaps = 237/1009 (23%)
Query: 102 PEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKP 161
P A AARE L GL SC + PH P + G + PLP P
Sbjct: 8 PGARAAREAFALGGL-SCAGAWSSCPPH--PPPRSAWLPGGRCSASIGQPPLPA-----P 59
Query: 162 WPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVP 221
P G+ G PS P ++P P + L+ L C++ +L
Sbjct: 60 LPPSH---GSSSGHPSKPYYAPGAPTPR-------------PLHGKLESLHGCVQALL-- 101
Query: 222 GPRHPETSPSFLPPLPSLGTSR-----LTR------------ADLGP--GSPPWAVKTEA 262
R P P L L S TR A+LGP G A
Sbjct: 102 --REP-AQPGLWEQLGQLYESEHDSEEATRCYHSALRYGGSFAELGPRIGRLQQAQLWNF 158
Query: 263 VSGDC--------PLQ---GLLHC--------------LKELPEAQDRHPSP----SGVG 293
+G C PL+ LLH +K E P P SG
Sbjct: 159 HTGSCQHRAKVLPPLEQVWNLLHLEHKRNYGAKRGGPPVKRAAEPPVVQPVPPAALSGPS 218
Query: 294 NRRLQENPGAWKRGSGG------PGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASC 347
G +RG PG L PPP PP P
Sbjct: 219 GEEGLSPGGKRRRGCNSEQTGLPPGLPLPPPP--------------------LPPPPPPP 258
Query: 348 QPGRQPLSPSATGDTRGVPQP---------SWGPEAQAASASSS-------------PLE 385
P PL AT + +P +WGPE + ++ P
Sbjct: 259 PPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQEQRHSLPHPYPYPAP 318
Query: 386 ALEACLKG---IPPNGSSPSQLPPTS----CSQNPQPGDSRSQKPELQPHRSHSEEATRE 438
A A G +P P PP + C +P S ++ +Q R S
Sbjct: 319 AYTAHPPGHRLVPAAPPGPGPRPPGAESHGCLPATRPPGSDLRESRVQRSRMDSS----- 373
Query: 439 PVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDL-----DFGSPVGNQGQ------ 487
V P +CV PSRP GT TS SSSSS++ L + G P + Q
Sbjct: 374 -VSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEPNPGIPGADHYQTPALEV 432
Query: 488 -HPGKGSPPGSS---PLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEG 543
H G+ P S P G + +P P+ P R R P W
Sbjct: 433 SHHGRLGPSAHSSRKPFLGAPAATPHLSLPP-GPSSPPPPPCPRLLRPPPPPAW------ 485
Query: 544 LRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPE 603
L+ AC +AR GE L + + P H+ GF P A+R V
Sbjct: 486 LKGPACRAAR---EDGEI-LEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSH 541
Query: 604 GSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLW 663
P+P ++ G P GP P P + DP P P
Sbjct: 542 TPPTPPTPTTSSSNSNSGSHSSSP------AGPVSFPPPPYL-----ARSIDPLPRPPSP 590
Query: 664 KPLPQERDRLP--SCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDP 721
PQ+ +P PP P S C T +GS PR + P+ +G G P
Sbjct: 591 AQNPQDPPLVPLTLALPPAPPSSCHQNT-SGSFRRPESPRPRVSFPK-TPEVGPGPPPGP 648
Query: 722 CPVSQLEKRPRVSE-ASRGLELGHGRPRVAAKTHE-----RLLPQGPP---ELPSESPPP 772
+ P V E +RG L P E ++LP G ++ ES
Sbjct: 649 LSKAPQPVPPGVGELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRK 708
Query: 773 ELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMR 832
E + V P QP PL++ SL + TA A T
Sbjct: 709 EEEQQQHEAGVAP----QP------PLKEPFASLQSPFPTDTAPTTTAPAVAVTTTTTTT 758
Query: 833 TQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKP------- 885
T + P P LP P A P P + + P P P
Sbjct: 759 TTTTATQEEEKKPPP--------ALPPPPPLAKFP-----PPSQPQPPPPPPPSPASLLK 805
Query: 886 ---KILRGQGESCRAGDLQGLSRGTARRARPL--------PPDAPPAEPPGLHCSSSQ-- 932
+L GQ R G + R PL PP A PP S+Q
Sbjct: 806 SLASVLEGQKYCYR-----GTGAAVSTRPGPLPTTQYSPGPPSGATALPPTSAAPSAQGS 860
Query: 933 QLLSSTPSCHAAPPAHPLLAHTGGHQSPLP-PLVPAALPLQGASPPAAS 980
S++ S + P + P+P P+ P P + PPA S
Sbjct: 861 PQPSASSSSQFSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSLPPARS 909
Score = 42.4 bits (98), Expect = 0.002
Identities = 110/440 (25%), Positives = 139/440 (31%), Gaps = 100/440 (22%)
Query: 625 VRPLRFACVGGPSPSP--SPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPL 682
V+P+ A + GPS SPG G E P L PLP P PP P
Sbjct: 206 VQPVPPAALSGPSGEEGLSPGGKRR-RGCNSEQTGLPPGL--PLP------PPPLPPPPP 256
Query: 683 SPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLEL 742
P P P SP + T+P S L G A P + P E L
Sbjct: 257 PPPPPPPPLPGLATSPPF--QLTKPGLWSTLH-GDAWGP--ERKGSAPPERQEQRHSLPH 311
Query: 743 GHGRPRVAAKTH---ERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPL 799
+ P A H RL+P PP P P PP + LPA+ +PP G L
Sbjct: 312 PYPYPAPAYTAHPPGHRLVPAAPP-----GPGPR-PPGAESHGCLPAT--RPP---GSDL 360
Query: 800 QQELHSLGAALAEKLDRLATALAGLAQE---------VATMRTQVNRLGRRPQGPGPMGQ 850
++ + TA A ++ + + G R P P
Sbjct: 361 RESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEPNPGIP 420
Query: 851 ASWMWTLPRGPRWAHG-------------------PGHRHLPYWRQKGPTRPKPKILRG- 890
+ + P HG H LP P P P++LR
Sbjct: 421 GADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPP 480
Query: 891 ------QGESCRAGD-----LQGLSRGTARRARPLPPDAP-------------------- 919
+G +CRA L+ L GT RP PP P
Sbjct: 481 PPPAWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDS 540
Query: 920 --PAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLP--------PLVPAAL 969
P PP SSS S S A P + P + PLP P P +
Sbjct: 541 HTPPTPPTPTTSSSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLV 600
Query: 970 PLQGASPPAASADADVPTSG 989
PL A PPA + TSG
Sbjct: 601 PLTLALPPAPPSSCHQNTSG 620
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 69.7 bits (169), Expect = 1e-11
Identities = 198/832 (23%), Positives = 261/832 (31%), Gaps = 154/832 (18%)
Query: 90 SRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQ 149
SR S+ G P P P P P+S L +P GP G
Sbjct: 909 SRSLSVPGSEDIPPPPTTSPPEPPYST----PPVPSSSGRLTPSPR-----GGPFNPG-S 958
Query: 150 GSPLPIKTA---DKPWP--TR---KEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGI 201
G PLP + D P P TR +E G P H P H
Sbjct: 959 GGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHA 1018
Query: 202 SPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTE 261
P + P E+ G L P PSL R PG+P +
Sbjct: 1019 HPPHPP---------EMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGS 1069
Query: 262 AVSGDCPLQGLLHCLKELP----EAQDRHPSPSGVGNR----RLQENPGAWKRGSGGPGY 313
A G QG +LP A P+ SG G + + + G ++G G P
Sbjct: 1070 AGGGGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLP-- 1127
Query: 314 LLTPPPHPDLGAGG----LLSVKMENSWVQSPP----GPASCQPGRQPLSPSATGDTRGV 365
P P P A ++ E + + P P++ GR S +
Sbjct: 1128 ---PAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQ 1184
Query: 366 PQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPEL 425
P+P+ G +S S +P + +PP SPS +P + P D SQ
Sbjct: 1185 PEPTGGGGGGGSSPSPAP------AMSPVPP---SPSPVPTPASPSGPATLDFTSQFGAA 1235
Query: 426 QPHRSHSE-----EATREPVLPLGLQSCVRDGPSRPLAPRGTP-TSFSSSSSTDWDL--- 476
+ E EA R L L + DG L P S S D +
Sbjct: 1236 LVGAARREGGWQNEARRRSTLFLSTDAGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSA 1295
Query: 477 -------DFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPV------PVLRPAWPCSS 523
GS G G G + G + L P+ L PA P
Sbjct: 1296 EPYLRLESAGSGAGYGGYGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGL 1355
Query: 524 AADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACH 583
A A R EG A R R EAP + H SP P
Sbjct: 1356 AL-----AARERALKESSEGGGAPQ-PPPRPPSPRYEAPPPTPHHHSPHAHHE---PVLR 1406
Query: 584 QRGFKDPGATRPGVWRWLPEGSAPKPSP----------LHCLESALRGILPVRPLRFACV 633
G P R + GS K P LH L G+ P+ +
Sbjct: 1407 LWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPL----LLQL 1462
Query: 634 GGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGS 693
G P+P PG S + + E+P + LP L +C+P P++ G P+
Sbjct: 1463 GTEPPAPHPGVSKPWRSAAPEEP-------ERLPLHVRFLENCQPRAPVTS-GRGPPSED 1514
Query: 694 SGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRG--LELGHGRPRVAA 751
G P PRR+ P P P S PR SE + L L P V
Sbjct: 1515 GPGVPPPSPRRSVP-------------PSPTS-----PRASEENGLPLLVLPPPAPSVDV 1556
Query: 752 KTHERLL--PQGPP-------ELPSE--SPPPELPPPEAAPPVLPASSLQPPCHCGKPLQ 800
+ E L P PP E P +P P P P+ P P + PP P
Sbjct: 1557 EDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPVPPPAVAAAP-- 1614
Query: 801 QELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQAS 852
LD A++L EVAT+ + P PGP A+
Sbjct: 1615 -----------PTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAA 1655
Score = 53.9 bits (128), Expect = 8e-07
Identities = 221/926 (23%), Positives = 287/926 (30%), Gaps = 189/926 (20%)
Query: 128 PHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRK 187
PH P+ S P G G+ I A+ P +PP SR
Sbjct: 864 PHHRAQPSYERPSFLPPGPGLMLRQKSIGAAEDDRPYL-----------APPAMKFSRSL 912
Query: 188 SHRGQERGTSEAGISPGNSPLQGL-INCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTR 246
S G E SP P + L P PR +P PLP+ +
Sbjct: 913 SVPGSEDIPPPPTTSPPEPPYSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFD- 971
Query: 247 ADLGPGSPPWAV--KTEAVSGDCPLQGLLHCLKELPEAQDRH-PSPSGVGNRRLQENPGA 303
GP P V + +++ PL H P H P P + +P
Sbjct: 972 ---GPSPPDTRVGSREKSLYHSGPLPPAHH---HPPHHHHHHAPPPQPHHHHAHPPHPPE 1025
Query: 304 WKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTR 363
+ G G P PPP LG L W P P P SPS G
Sbjct: 1026 METG-GSPD---DPPPRLALGPQPSL-----RGWRGGGPSPTPGAP-----SPSHHGSAG 1071
Query: 364 GVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLP---PTSCSQNPQPGDSRS 420
G S GP A P A A + +P + P T PQ G
Sbjct: 1072 GGGGSSQGP---ALRYFQLPPRAASAAMY-VPARSGRGRKGPLVKQTKVEGEPQKGGG-- 1125
Query: 421 QKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGS 480
L P S + A+ +P + S P + + TS S SS +
Sbjct: 1126 ----LPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEP 1181
Query: 481 PVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTAD 540
P Q + G G GSSP P P + P P S + P
Sbjct: 1182 PT--QPEPTGGGGGGGSSPS----------PAPAMSPVPPSPSPVPTPASPSGPATLDFT 1229
Query: 541 KEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRW 600
+ A + R G + EA RS +S G +D G G
Sbjct: 1230 SQFGAALVGAARREGGWQNEARRRSTLFLSTDA------------GDEDGGDGGLGT--- 1274
Query: 601 LPEGSAPKPSPLHCLESALRGILPVRP-LRFACVGGPSPSPSPGSSSSFSGSEGED---- 655
G+AP P H +S G+ P LR G + G+ S G G
Sbjct: 1275 ---GAAPGPRLRHS-KSIDEGMFSAEPYLRLESAGSGAGYGGYGAGSRAYGGGGGSSAFT 1330
Query: 656 ----PRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTP-----AGSSGGSPGEDPRRTE 706
PRP L PL + + P PL + GG+P PR
Sbjct: 1331 SFLPPRP---LVHPLTGK-----ALDPASPLGLALAARERALKESSEGGGAPQPPPRPPS 1382
Query: 707 PRYCSGLGAGTAQDPC----PVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGP 762
PRY + P PV +L A R ELG+ R + E+ LP P
Sbjct: 1383 PRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARR--ELGY---RAGLGSQEKSLPASP 1437
Query: 763 PELPSESPPPELPP--PEAAPPVLPASSLQPPCHCG--KPLQQELHSLGAALAEKLDRLA 818
P S LPP P P +L + P H G KP + +A E+ +RL
Sbjct: 1438 PAA-RRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWR-------SAAPEEPERLP 1489
Query: 819 TALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQK 878
+ L +P+ P G RGP GPG +P +
Sbjct: 1490 LHVRFLEN-------------CQPRAPVTSG---------RGPPSEDGPG---VPPPSPR 1524
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAE------------PPGL 926
P P S RA + GL LPP AP + PP L
Sbjct: 1525 RSVPPSPT-------SPRASEENGLP------LLVLPPPAPSVDVEDGEFLFVEPLPPPL 1571
Query: 927 HCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADADVP 986
S+S + P PL T G PLP A PL PPA +A P
Sbjct: 1572 EFSNSFE-----------KPESPL---TPGPPHPLPDTPAPATPLPPVPPPAVAAAP--P 1615
Query: 987 TSGVAPDGIPERPKEPSSLLGGVQRA 1012
T + E ++L G A
Sbjct: 1616 TLDSTASSLTSYDSEVATLTQGASAA 1641
Score = 42.7 bits (99), Expect = 0.002
Identities = 200/860 (23%), Positives = 275/860 (31%), Gaps = 202/860 (23%)
Query: 151 SPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQG 210
SPL + A + ++ G GG P PP PS R +P +P
Sbjct: 1351 SPLGLALAARERALKESSEG--GGAPQPPPRPPSPRYE-------------APPPTPHHH 1395
Query: 211 LINCLKEILVP--GPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCP 268
+ E ++ G P+ + L LG+ + P SPP A ++
Sbjct: 1396 SPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSL----PASPPAARRS-------- 1443
Query: 269 LQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGL 328
LLH L P+ GVG LQ L T PP P G
Sbjct: 1444 ---LLHRLP---------PTAPGVGPLLLQ---------------LGTEPPAPHPG---- 1472
Query: 329 LSVKMENSWVQSPPGPASCQP-------GRQPLSPSATG------DTRGVPQPSWGPEAQ 375
+ W + P P QP +P +G D GVP PS P
Sbjct: 1473 ----VSKPWRSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPS--PRRS 1526
Query: 376 AASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHR-SHSEE 434
+ +SP + E NG LPP + S + + G+ +P P S+S E
Sbjct: 1527 VPPSPTSPRASEE--------NGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFE 1578
Query: 435 ATREPVLPLGLQSCVRD--GPSRPLAP-------RGTPTSFSSSSS-TDWDLDFGSPVGN 484
P+ P G + D P+ PL P PT S++SS T +D + +
Sbjct: 1579 KPESPLTP-GPPHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQG 1637
Query: 485 QGQHPGKGSPPGS---------------SPLQGLENCLKEIPVPVL--RPAWPCSSAADR 527
PG PPG P G ++ ++E+ P SSA+
Sbjct: 1638 ASAAPGDPHPPGPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTL 1697
Query: 528 GPRRAEPRNWTADKEGLRAEACESARL---------GQGRGEAPTRSLHLVSPQVFTSSC 578
AE G A L GQ G + T PQ+ T S
Sbjct: 1698 SSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPY-PPQLMTPSK 1756
Query: 579 VPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVR----PLRFACVG 634
+ R G RPG L + P + + G+L +R P G
Sbjct: 1757 LRG---RALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAG 1813
Query: 635 GP-------SPSPSPGSSSS----FSGSEGEDPRPEPDLWKPLPQ-ERDRLPSCKPPVPL 682
GP P P P +SS EG P P P L PL Q + L + K +
Sbjct: 1814 GPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGP-PPPPLPGPLAQPQASALATVKASIIS 1872
Query: 683 SPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLEL 742
G S + G P + G G+G D S V E + L+
Sbjct: 1873 ELSSKLQQFGGSSAAGGALP------WARG-GSGGGGD----SHHGGASYVPERTSSLQ- 1920
Query: 743 GHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQE 802
R R++ + LL + L P P LPP V P ++ P
Sbjct: 1921 ---RQRLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVSPTAAAAP----------- 1966
Query: 803 LHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRP-------QGPGPMGQASWMW 855
A + +T+ L MR + R P P + S +
Sbjct: 1967 -----GATSPSASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLP 2021
Query: 856 TLPRGPRW----------AHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSR 905
LP GP + G G P+ P P P I G G G L G SR
Sbjct: 2022 ILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVP--PHPGISGGLG-----GALSGASR 2074
Query: 906 G-TARRARPLPPDAPPAEPP 924
+ R LPPD P P
Sbjct: 2075 SLSPTRLLSLPPDKPFGAKP 2094
Score = 41.2 bits (95), Expect = 0.005
Identities = 100/417 (23%), Positives = 131/417 (31%), Gaps = 102/417 (24%)
Query: 640 PSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVP-----LSPCPGGTP--AG 692
P+ S S S ED P P P P P PPVP L+P P G P G
Sbjct: 904 PAMKFSRSLSVPGSEDIPPPPTTSPPEP------PYSTPPVPSSSGRLTPSPRGGPFNPG 957
Query: 693 SSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAK 752
S G P P + P P P SR L H P
Sbjct: 958 SGGPLPASSP-------------ASFDGPSP-------PDTRVGSREKSLYHSGP----- 992
Query: 753 THERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAE 812
LP P+ PP A PP QP H P G + +
Sbjct: 993 -----LP------PAHHHPPHHHHHHAPPP-------QPHHHHAHPPHPPEMETGGSPDD 1034
Query: 813 KLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQA---SWMWTLPRGPRWAHGPGH 869
RLA + Q + G R GP P A S + G + GP
Sbjct: 1035 PPPRLA------------LGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPAL 1082
Query: 870 RH-------------LPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRA-RPLP 915
R+ +P +G P K + +GE + G L T+ + +P P
Sbjct: 1083 RYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPP 1142
Query: 916 PDAPPAEPPGLHC---------SSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVP 966
A P+E + +SS S S A PP P GG P P
Sbjct: 1143 AVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGSSPSPAP 1202
Query: 967 AALPLQGASPPAASADADVPTSGVAPDGIPERPKEPSSLLGGVQRALQEELWGGEHR 1023
A P+ P + + P S P + + ++L+G +R E W E R
Sbjct: 1203 AMSPV-----PPSPSPVPTPASPSGPATLDFTSQFGAALVGAARR---EGGWQNEAR 1251
Score = 33.9 bits (76), Expect = 0.81
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 298 QENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPAS---------CQ 348
QE+P R G PG LT PP L A S+ + + V S PG AS Q
Sbjct: 411 QESPKYAARRRGPPGTGLTVPP-ALLRANSDTSMALPDWMVFSAPGAASSGAPGPTSGSQ 469
Query: 349 PGRQPLSPS---ATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLP 405
QP +P+ ++G R P G A++ S P +A + +G P + +P + P
Sbjct: 470 GQSQPSAPTTKLSSGTLRSASSPR-GARARSPSRGRHPEDA-KRQPRGRPSSSGTPREGP 527
Query: 406 PTSCSQNPQPGDS 418
+ PG S
Sbjct: 528 AGGTGGSGGPGGS 540
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 68.2 bits (165), Expect = 4e-11
Identities = 213/898 (23%), Positives = 292/898 (32%), Gaps = 168/898 (18%)
Query: 176 PSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQ--GLINCLKEILVPGPRHPETSPSFL 233
P PP+ P R T+ PG+ P + + + PG P P
Sbjct: 140 PGPPSARPPCRVPP------TTPLNGGPGSLPPEPPSVSQAFPTLAGPGGLFP---PRLA 190
Query: 234 PPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVG 293
P+PS G+S G P A+S + P L+ D P+
Sbjct: 191 DPVPSGGSSSPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHA 250
Query: 294 NRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQP 353
+ +P + LTPPP P ++ + + PGPAS P
Sbjct: 251 SSSPPSDPPLFHCSDA-----LTPPPLPP------------SNNLPAHPGPASQPPVSSA 293
Query: 354 LS--PSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPP----NGSSP-SQLPP 406
P G G P GP A ASS A +A +PP G P +Q P
Sbjct: 294 TMHLPLVLGPLGGAPTVE-GPGAPPFLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPS 352
Query: 407 TSCSQNPQPGDSRSQKP----ELQPHRSHSEEATREPVLPLGL-QSCVRDGPSRPLAPR- 460
S S + +P R ++P L R P P + Q PS+P+ P
Sbjct: 353 ASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSV 412
Query: 461 ----GTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLR 516
G PT S S ++L +G+ P + SP Q P ++
Sbjct: 413 LSLLGLPTPGPSHSDGSFNL-----LGSDAHLPPPPTLSSGSPPQ---------PRHPIQ 458
Query: 517 PAWPCSSAADRGPRRAEPRNWTADKEGL-RAEACESARLGQGRGEAPTRSLHLVSPQVFT 575
P+ P +++ P A K + + +S G G G P L P +
Sbjct: 459 PSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQSPSEGLGMGAGPACPL----PPLAG 514
Query: 576 SSCVP-ACHQRGFKDPGATRPGVWRWLP---EGSAPKPSPLHCLESALRGIL-------P 624
P ++G GA PG+ LP P PSPL L +L G+L P
Sbjct: 515 GEAFPFPSPEQGLALSGAGFPGMLGALPLPLSLGQPPPSPL--LNHSLFGVLTGGGGQPP 572
Query: 625 VRPLRFACVGGPSPSPSPGSSS--SFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPL 682
PL GGP P +PG S + P P L P + L S P + L
Sbjct: 573 PEPL-LPPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLASFLPLLAL 631
Query: 683 SPCPG-GTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLE 741
P G G + G P +P SGLG P L P + + L
Sbjct: 632 GPTAGDGEGSAEGAGGPSGEP-------FSGLGD---LSPLLFPPLSAPPTLIALNSALL 681
Query: 742 LGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLP----ASSL-QPPCHCG 796
P P G P P P+ PP ++ ASSL + P + G
Sbjct: 682 AATLDP-----------PSGTPPQPCVLSAPQPGPPTSSVTTATTDPGASSLGKAPSNSG 730
Query: 797 KPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWT 856
+P Q LGA+L L L ++ L + +P GP GQ
Sbjct: 731 RPPQLLSPLLGASLLGDLSSLTSSPGALPSLL------------QPPGPLLSGQL----- 773
Query: 857 LPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
G + LP G P P +C LQ +PP
Sbjct: 774 -----------GLQLLP-----GGGAPPPLSEASSPLACLLQSLQ------------IPP 805
Query: 917 DAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASP 976
+ P E P L S L P A PP L G P+P L L G
Sbjct: 806 EQP--EAPCLPPESPASALEPEP---ARPPLSALAPPHGSPDPPVPEL------LTGRGS 854
Query: 977 PAASADADVPTSGVAPDGIPERPKEPSSLLGGVQRALQEELWGG----EHRDPRWGAH 1030
G+ + P R ++P S + AL+ GG R PR H
Sbjct: 855 GKRGRRGGGGLRGINGEARPARGRKPGSRREPGRLALKWGTRGGFNGQMERSPRRTHH 912
Score = 35.8 bits (81), Expect = 0.21
Identities = 66/250 (26%), Positives = 87/250 (34%), Gaps = 45/250 (18%)
Query: 767 SESPPPELPPPEAAPPVLPAS-SLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLA 825
S S P E P+ V P S +PPC P L+ +L + ++ A LA
Sbjct: 122 SHSSPGEGASPQMFHTVSPGPPSARPPCRV--PPTTPLNGGPGSLPPEPPSVSQAFPTLA 179
Query: 826 QEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKP 885
GPG + +P G R LP P P P
Sbjct: 180 ------------------GPGGLFPPRLADPVPSGG----SSSPRFLPRGNAPSPAPPPP 217
Query: 886 KILRGQGESCRAGDLQGLSRGTARRARPLPPDA---PPAEPPGLHCSSSQQLLSSTPSCH 942
+ S G S + P P A PP++PP HCS + L+ P
Sbjct: 218 PAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPLFHCSDA---LTPPP--- 271
Query: 943 AAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEP 1002
PP++ L AH G + PP+ A + L P A PT V G P P
Sbjct: 272 -LPPSNNLPAHPG--PASQPPVSSATMHLPLVLGPLGGA----PT--VEGPGAP--PFLA 320
Query: 1003 SSLLGGVQRA 1012
SSLL +A
Sbjct: 321 SSLLSAAAKA 330
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 65.5 bits (158), Expect = 3e-10
Identities = 168/715 (23%), Positives = 231/715 (32%), Gaps = 103/715 (14%)
Query: 1 MRENYETLVSVGTAELLPLSAFLSPSEPGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLH 60
+R + E V+ G A P + LS G G P G P R S
Sbjct: 125 LRISAEETVARGKATEAPKRSALS--------AGARRDTSGPTP---GTPSPAMARRSRA 173
Query: 61 LTALVQLVKEIPEFLFGEVKGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCL 120
V L + P + + P AS + P AA R P GL
Sbjct: 174 AGTEVGLPRPAPS---ARPRPPTEGPRKSVSSAS-EHSTTEPSPAARRRPSAGGGL---- 225
Query: 121 PDGPTSQP-HLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPP 179
P S+ + TP S SGP+ G +P P + +G AL PP
Sbjct: 226 -QRPASRSLSSSATPLSSPARSGPSARGTPRAPA------HPSQPKPKGLQAL----RPP 274
Query: 180 THSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPET--SPSFLPPLP 237
+P R+ + +P PL + P P P + +P L LP
Sbjct: 275 QVTPPRKDA-------------APALGPLSS-----SPLATPSPSAPPSPSAPPSLQTLP 316
Query: 238 SLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRL 297
S + ++A GSP T + PL L + P A P L
Sbjct: 317 SPPATPPSQATTSLGSPTLQA-THSFLPSPPLSPLATPPPQAPPALALPP---------L 366
Query: 298 QENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPAS----CQPGRQP 353
Q P P L TP P A L+V + + PP P P P
Sbjct: 367 QAPPSPPASPPLSP--LATPSPQ----APNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 420
Query: 354 LSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNP 413
+SPSAT ++ P + P S +SP + A PP P PP ++ P
Sbjct: 421 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP---PPQAPPPLAAPPLQLAKPP 477
Query: 414 QPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSS--SS 471
P LQ A P Q+ S P++P TP + ++
Sbjct: 478 PQAPPALATPPLQ--------ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 529
Query: 472 TDWDLDFGSPVGNQGQHPGKGSPPG-SSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPR 530
+ P Q P + PG + + G L P P P+ SS
Sbjct: 530 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 589
Query: 531 RAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDP 590
+ T+ E LR +S G P P ++C PA RG P
Sbjct: 590 AGHSSSATSTPEELRGY--DSGPEGGAAASPP--------PDAELAACHPAAWSRGPAPP 639
Query: 591 GATR--PGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSF 648
A R PG P + P + C G P A GPSP S G +++
Sbjct: 640 LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAG 699
Query: 649 SGSEGEDPRPEPDLWKPLP----QERDRLPSCKPPVPLSPCPGGTPAGSSGGSPG 699
+G+ P+ LP Q + L+ G AG SGG PG
Sbjct: 700 AGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGA--AGGSGGGPG 752
Score = 59.7 bits (143), Expect = 1e-08
Identities = 181/703 (25%), Positives = 229/703 (32%), Gaps = 152/703 (21%)
Query: 344 PASCQPGRQPLSPSATGDTRGVPQPSWGPEA-----QAASASSSPLEALEACLKGIPPNG 398
PA+ PG L+P G R P P P A A + PL + G
Sbjct: 17 PAARAPGL--LTPRPPGSPR--PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 399 SSP-------SQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRD 451
S+P S+ P + + P + S P P R+ T P PLG Q +R
Sbjct: 73 SAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRA---SGTTRPG-PLG-QKGLRI 127
Query: 452 GPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGS--SPLQGLENCLKE 509
+A RG T S+ L G+ G PG SP + S G E L
Sbjct: 128 SAEETVA-RGKATEAPKRSA----LSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPR 182
Query: 510 IPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESAR----LGQGRGEAPTRS 565
P P RP P GPR++ ++ E E +AR G G +RS
Sbjct: 183 -PAPSARPRPPTE-----GPRKSV----SSASEHSTTEPSPAARRRPSAGGGLQRPASRS 232
Query: 566 LHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPV 625
L +SS P G + G R S PKP L L + P
Sbjct: 233 L--------SSSATPLSSPAR---SGPSARGTPRAPAHPSQPKPKGLQALRPPQ--VTPP 279
Query: 626 R--------PLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEP------DLWKP-LPQER 670
R PL + + PSPS P S+ S P P L P L
Sbjct: 280 RKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATH 339
Query: 671 DRLPS-----------------CKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGL 713
LPS PP+ P P +P S +P P+ L
Sbjct: 340 SFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPS--PQAPNALAVHLL 397
Query: 714 GAGTAQDPCPVSQLEKRPRVSE--ASRGLELGHGRPRVAAKTHE--RLLPQGPPELPSES 769
A + P P Q P S + P +AA + P PP PS +
Sbjct: 398 QAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT 457
Query: 770 PPPELPPPEAAPPVLPAS--SLQPPCHCGKPLQ-----------QELHSLGAALAEKLDR 816
PPP+ PPP AAPP+ A PP PLQ Q S A+L +
Sbjct: 458 PPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL--PMSP 515
Query: 817 LATALAGLAQEVATMRTQVN---------RLGRRPQGPGPMGQASWMWTLPRGPR--WAH 865
LAT +A QV + RRP PGP S GPR A
Sbjct: 516 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVS-------GPRLTLAL 568
Query: 866 GPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPL------PPDAP 919
PG P P R + DL G S L P
Sbjct: 569 APG--------------PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGA 614
Query: 920 PAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLP 962
A PP +L + P+ + PA P LA G +PLP
Sbjct: 615 AASPP-----PDAELAACHPAAWSRGPAPP-LAFRGAPGAPLP 651
Score = 52.4 bits (124), Expect = 2e-06
Identities = 137/554 (24%), Positives = 182/554 (32%), Gaps = 100/554 (18%)
Query: 99 RASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTA 158
R +P A A +GL + P P + D++ + GP S P+ T
Sbjct: 251 RGTPRAPAHPSQPKPKGLQALRP------PQVTPPRKDAAPALGPL------SSSPLATP 298
Query: 159 DKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQE--RGTSEAGISPGNSPLQGLINCLK 216
P P +L PSPP PS+ + G + T SP SPL
Sbjct: 299 SPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 358
Query: 217 EILVPGPRHPETSPSFLPPLPSLGTS----------RLTRADLGPGSPPWAVKTEAVSGD 266
L P SP PPL L T L +A P P +
Sbjct: 359 PALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 418
Query: 267 CPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPH--PDLG 324
P+ P A +P + LQ P P TPPP P L
Sbjct: 419 PPVS---------PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS--ATPPPQAPPPLA 467
Query: 325 AGGLLSVK--------MENSWVQSPPGPASCQPGRQPLSPSATGDTRGVP-QPSWGPEAQ 375
A L K + +Q+ P P + PG+ P SPSA+ +P P P Q
Sbjct: 468 APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS-----LPMSPLATPPPQ 522
Query: 376 AASASSSPLEALEACLKGIPPNGSSPS----QLPPT--------------SCSQNPQPGD 417
A ++PL L+ P +SP+ + PPT + + P P
Sbjct: 523 APPVLAAPL------LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 576
Query: 418 SRSQKPELQ--PHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTP-TSFSSSSSTDW 474
SRS L HS AT P G S GP A P ++ W
Sbjct: 577 SRSPSSTLSGPDLAGHSSSATSTPEELRGYDS----GPEGGAAASPPPDAELAACHPAAW 632
Query: 475 DLDFGSPVGNQGQHPGKGS--PPGSSPLQGLENC-LKEIPVPVLRPAWPCSSAADRGPRR 531
P+ +G PG PP + P C + E P A P A D GP
Sbjct: 633 SRGPAPPLAFRGA-PGAPLPWPPATGPGSADGLCTIYETEGP--ESATPAPGALDPGPSP 689
Query: 532 AEPRNWTADKEGLRA--EACESARLGQGRGEAPTRSL------HLVSPQVFTSSCVPACH 583
A G A + + ARL GE P +L HL+S + ++ A
Sbjct: 690 GTSGGKAAAGAGAGASSRSPKQARL----GELPLGALQASVVQHLLSRTLLLAAAEGAAG 745
Query: 584 QRGFKDPGATRPGV 597
G GA GV
Sbjct: 746 GSGGGPGGAEGGGV 759
Score = 50.8 bits (120), Expect = 6e-06
Identities = 161/662 (24%), Positives = 213/662 (32%), Gaps = 108/662 (16%)
Query: 373 EAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHS 432
+A+A +A+ +P L PP SP PP + + G + + + R+
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRPPG--SPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG 64
Query: 433 EEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKG 492
P +S R GP+R P P S + PV + G+ G
Sbjct: 65 IGGATIP------ESAPRAGPTRTSRP---PASGRGERAPPAKNTSPGPVSSPGRASGT- 114
Query: 493 SPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRR--AEPRNWTADKEGLRAEACE 550
+ PG +GL +E P SA G RR + P T R
Sbjct: 115 TRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 174
Query: 551 SARLGQGRG----------EAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRW 600
+G R E P +S+ S T PA +R G RP R
Sbjct: 175 GTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPS-PAARRRPSAGGGLQRPAS-RS 232
Query: 601 LPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEP 660
L + P SP SA G +P+ S G + P
Sbjct: 233 LSSSATPLSSPARSGPSAR---------------GTPRAPAHPSQPKPKGLQALRPP--- 274
Query: 661 DLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQD 720
+ P +D P+ P LS P TP SP P + P L + A
Sbjct: 275 ---QVTPPRKDAAPALGP---LSSSPLATP------SPSAPPSPSAPPSLQTLPSPPATP 322
Query: 721 PCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAA 780
P S+A+ L G P + A TH L PP P +PPP+ PP A
Sbjct: 323 P------------SQATTSL----GSPTLQA-THSFL--PSPPLSPLATPPPQAPPALAL 363
Query: 781 PPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGR 840
PP+ PP P L L + + LA L A + +
Sbjct: 364 PPLQA-----PP---SPPASPPLSPLATPSPQAPNALAVHLLQ-----APFSPPPSPPVQ 410
Query: 841 RPQGPGPMGQASWMWTLP-RGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGD 899
P P S T P + P P + P P P A
Sbjct: 411 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 470
Query: 900 LQ-GLSRGTARRARPLPP----DAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHT 954
LQ A A PP +PPA PG S L +P P A P+LA
Sbjct: 471 LQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLA-- 528
Query: 955 GGHQSPL---PPLVPAALPLQG-ASPPAASADADVP----TSGVAPDGIPERPKEPSSLL 1006
+PL PP PA+ LQ PP D V T +AP P + PSS L
Sbjct: 529 ----APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 584
Query: 1007 GG 1008
G
Sbjct: 585 SG 586
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 64.7 bits (156), Expect = 4e-10
Identities = 163/668 (24%), Positives = 211/668 (31%), Gaps = 71/668 (10%)
Query: 123 GPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPW-PTRKEGPGALGGEPSPPTH 181
GP P AT + P DG GSP P P K PG G P
Sbjct: 1284 GPQGPPGSATAKGERGF---PGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGER 1340
Query: 182 SPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGT 241
P K G G G PG L G PGPR P P P GT
Sbjct: 1341 GPRGPKGEPGAP-GQVIGGEGPG---LPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGT 1396
Query: 242 S-RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSG-VGNRRLQE 299
+ + + D G PP + G+ L GL P P G VG +
Sbjct: 1397 AMKGDKGDRGERGPPGPGEGGIAPGEPGLPGL-----------PGSPGPQGPVGPPGKKG 1445
Query: 300 NPGAWKRGSGG-PGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
G + G+ G PG +P G G + K + + PGP + P
Sbjct: 1446 EKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGF----PGPLGEAGEKGERGPPG 1501
Query: 359 TGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDS 418
+RG+P + P A+ P KG P P+ + P + GD
Sbjct: 1502 PAGSRGLPGVAGRPGAKGPEGPPGPTGRQGE--KGEPGRPGDPAVVGPAVAGPKGEKGD- 1558
Query: 419 RSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDF 478
+ P + P GL GP RG P + + D
Sbjct: 1559 ------VGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRG-PIGLTGRAGPPGD--- 1608
Query: 479 GSPVGNQGQHPGKGSPPGSSPLQGLENCLKEI--PVPVLRPAWPCSSAADRGPRRAEPRN 536
P G +G PG+ PPG +G + + E P P P A +RG R A
Sbjct: 1609 SGPPGEKGD-PGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLP-GKAGERGLRGAPGVR 1666
Query: 537 WTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCV---PACHQRGFKDPGAT 593
++G + + E R G P P V P ++G +PG
Sbjct: 1667 GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKG--EPGDR 1724
Query: 594 RPGVWRWLPEGSAPKP-SPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSE 652
R P+G P +P RG P P V GP+ G
Sbjct: 1725 GQEGPRG-PKGDPGLPGAPGERGIEGFRG--PPGPQGDPGVRGPAGEKGDRGPPGLDGRS 1781
Query: 653 GEDPRP--------EPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRR 704
G D +P K RD LP + L P P G P G PGED +
Sbjct: 1782 GLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGL-PGPSGPPG--LPGKPGEDGK- 1837
Query: 705 TEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPE 764
GL + P K + + G E G P+ L PQGPP
Sbjct: 1838 ------PGLNGKNGEPGDPGEDGRKGEKGDSGASGRE-GRDGPKGERGAPGILGPQGPPG 1890
Query: 765 LPSESPPP 772
LP PP
Sbjct: 1891 LPGPVGPP 1898
Score = 55.5 bits (132), Expect = 3e-07
Identities = 265/1101 (24%), Positives = 346/1101 (31%), Gaps = 196/1101 (17%)
Query: 25 PSEPGRAVGG------GSHADEGQEPAGCGDPQG--GQPRHSLHLTALVQLVKEIPEFLF 76
P PG+ +GG G D G P+G P+G G P
Sbjct: 1349 PGAPGQVIGGEGPGLPGRKGDPG--PSGPPGPRGPLGDPGP------------------- 1387
Query: 77 GEVKGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTD 136
+G P + +G D P P L LP P Q P
Sbjct: 1388 ---RGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQG-----PVG 1439
Query: 137 SSCSSGPTGDGVQGSP-LPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERG 195
G GD G+P LP + + PGA+G + P +G ERG
Sbjct: 1440 PPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKG-ERG 1498
Query: 196 TSEAGISPGNSPLQGLINCLKEILVPGP--RHPETSPSFLP--PL---PSLGTSRLTRAD 248
S G + G PGP R E P P P++ + + D
Sbjct: 1499 PPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGD 1558
Query: 249 LGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGS 308
+GP P A V G+ GL+ P+ P G+ R
Sbjct: 1559 VGPAGPRGAT---GVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEK 1615
Query: 309 GGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDT--RGVP 366
G PG P P G G + K + + PPG P P G+ RG P
Sbjct: 1616 GDPGRPGPPGPVGPRGRDGEVGEKGD----EGPPG--------DPGLPGKAGERGLRGAP 1663
Query: 367 QPSWGPEAQAASA--------SSSPLEALEACLKGIPPNGSSPSQLPPTS--CSQNPQPG 416
GP + + SP + +G P P +L T + +PG
Sbjct: 1664 GVR-GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPG 1722
Query: 417 DSRSQKPELQPHRS---------HSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFS 467
D R Q+ P E R P P G VR GP+ RG P
Sbjct: 1723 D-RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQG-DPGVR-GPAGEKGDRGPP-GLD 1778
Query: 468 SSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADR 527
S D P G G GK PG L GL + +P P P P D
Sbjct: 1779 GRSGLDGKPGAAGPSGPNGA-AGKAGDPGRDGLPGLRG-EQGLPGPSGPPGLPGKPGEDG 1836
Query: 528 GP----RRAEPRNWTAD-KEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPAC 582
P + EP + D ++G + ++ S R G+ + + ++ PQ P
Sbjct: 1837 KPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPV- 1895
Query: 583 HQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSP 642
PG PGV P G+ PK +G+ R LR G P P+
Sbjct: 1896 -----GPPGQGFPGV----PGGTGPKGDRGETGSKGEQGLPGERGLR----GEPGSVPNV 1942
Query: 643 GSSSSFSGSEGEDPRPEPDLWK-------PLPQERDRLPSCK-----PPVPLSPC--PGG 688
+G + R + W P+P ER R P PP P PG
Sbjct: 1943 DRLLETAGIKASALREIVETWDESSGSFLPVP-ERRRGPKGDSGEQGPPGKEGPIGFPGE 2001
Query: 689 TPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPR-------------VSE 735
G PG P+ GL G P P S L P V E
Sbjct: 2002 RGLKGDRGDPG-------PQGPPGLALGERGPPGP-SGLAGEPGKPGIPGLPGRAGGVGE 2053
Query: 736 ASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPP-------------EAAPP 782
A R E G + R GPP LP PP P P E PP
Sbjct: 2054 AGRPGERGERGEKGERGEQGR---DGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPP 2110
Query: 783 VLPASSLQPPCH--CGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGR 840
L + +P + G + + + E R GL E R G
Sbjct: 2111 GLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGE----RGMAGPEG- 2165
Query: 841 RPQGPGPMGQASWMWTLPRGPRWAHG-PGHRHLPYWRQKGPTRPK-PKILRGQ-GESCRA 897
+P GP G P GP HG PG P GP P+ P L+G+ GE+
Sbjct: 2166 KPGLQGPRG--------PPGPVGGHGDPGPPGAP--GLAGPAGPQGPSGLKGEPGETGPP 2215
Query: 898 GDLQGLSRGTARRARPLPPD----APPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAH 953
G +GL+ T P PP P PGL + P A
Sbjct: 2216 G--RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGS 2273
Query: 954 TGGHQSP-LP-PLVPAALPLQGASP-------PAASADADVPTSGVAPDGIPERPKEPSS 1004
G SP LP P+ P P +P P A + P G+A D + E +
Sbjct: 2274 PGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAP-GGLAGDLVGEPGAKGDR 2332
Query: 1005 LLGGVQRALQEELWGGEHRDP 1025
L G + E GE DP
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDP 2353
Score = 43.1 bits (100), Expect = 0.001
Identities = 99/432 (22%), Positives = 134/432 (31%), Gaps = 109/432 (25%)
Query: 142 GPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGI 201
G G GV GSP P P P +G L G P P GQ E G
Sbjct: 2369 GDPGVGVPGSPGP------PGPPGVKGDLGLPGLPGAPGVV-----GFPGQTGPRGEMG- 2416
Query: 202 SPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTE 261
PG S +GL +PGP P P + P P + + D G G P
Sbjct: 2417 QPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGP-PGASGLKGDKGDPGVGLPG------ 2469
Query: 262 AVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRG-SGGPGYLLTPPPH 320
P + P G R QE P RG +G PG
Sbjct: 2470 ------------------PRGERGEPGIRGEDGRPGQEGP----RGLTGPPGSRGERGEK 2507
Query: 321 PDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGP-----EAQ 375
D+G+ GL K +++ + PPGP + P +G + P + +
Sbjct: 2508 GDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGE 2567
Query: 376 AASASSSPLEALEACL--------KGIPPNGSSPSQ---------------LPPT----- 407
S+ L L L GIP + SP + + P
Sbjct: 2568 PGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGE 2627
Query: 408 -----SCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGT 462
+C + + GD P +P + + EP +P + ++G P RG
Sbjct: 2628 RGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRG- 2686
Query: 463 PTSFSSSSSTDWDLDFGSPVGNQGQH-----PGKGSPPGSSPLQGLENCLKEIPVPVLRP 517
F P G+QG+ PG G PG S G P
Sbjct: 2687 ---FDGQP---------GPKGDQGEKGERGTPGIGGFPGPSGNDGSAG-----------P 2723
Query: 518 AWPCSSAADRGP 529
P S RGP
Sbjct: 2724 PGPPGSVGPRGP 2735
Score = 38.1 bits (87), Expect = 0.043
Identities = 109/446 (24%), Positives = 131/446 (29%), Gaps = 92/446 (20%)
Query: 80 KGAMDSP----ESESRGASLDGERASPEAAAAREPCPLRGLLSCLPD----GPTSQPHLA 131
K ++D P E L G + P + + P RG+ D GP Q
Sbjct: 2093 KVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNP 2152
Query: 132 TTPTDSSCSSGPTG----DGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRK 187
P + + GP G G +G P P+ P P PGA G PS K
Sbjct: 2153 GLPGERGMA-GPEGKPGLQGPRGPPGPVGGHGDPGP-----PGAPGLAGPAGPQGPSGLK 2206
Query: 188 SHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPE--TSPSFLPPLPSL------ 239
G+ P +GL + +PGP P P P LP
Sbjct: 2207 GEPGET-----------GPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGK 2255
Query: 240 ----GTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNR 295
G + D GSP V G L G P P P+G +
Sbjct: 2256 PGAPGRDGASGKDGDRGSP-------GVPGSPGLPG--------PVGPKGEPGPTGAPGQ 2300
Query: 296 RLQENPGAWKRGSGGPGYLL-----TPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPG 350
+ PGA K G PG L P D G G K E P P
Sbjct: 2301 AVVGLPGA-KGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQK 2359
Query: 351 RQPLSPSATGDTR-GVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC 409
P GD GVP S GP L L G P P Q P
Sbjct: 2360 GAPGPKGFKGDPGVGVPG-SPGPPGPPGVKGDLGLPGLP----GAPGVVGFPGQTGPRGE 2414
Query: 410 SQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSS 469
P P R P G R+G PL P G P S
Sbjct: 2415 MGQPGPSGERGLAG------------------PPG-----REGIPGPLGPPGPPGSVGPP 2451
Query: 470 SSTDWDLDFGSP-VGNQGQHPGKGSP 494
++ D G P VG G +G P
Sbjct: 2452 GASGLKGDKGDPGVGLPGPRGERGEP 2477
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 64.7 bits (156), Expect = 4e-10
Identities = 166/746 (22%), Positives = 236/746 (31%), Gaps = 143/746 (19%)
Query: 121 PDGPTSQPHLATTPTDSSCSSGPTGDGVQ--GSPLPIKTADKPWPTRKEGPGALGGEP-S 177
P+G P P GP D +Q G+P I ++ +P + + PG G+P
Sbjct: 203 PEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSI-SSQQPEKIKSQPPGT--GKPIQ 259
Query: 178 PPTHSPSRRKSHRGQERG-----TSEAGISPGNSPLQGLINCLK---------------- 216
PT +P + +R T +A I G S L + K
Sbjct: 260 GPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQP 319
Query: 217 --EILVPGPRHPETSPSFL------------PPLPSLGTSRLTRADLGPGSPPWAVKTEA 262
E PGP P PS L PP+ GT++ LGP PP
Sbjct: 320 GHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPP------- 372
Query: 263 VSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTP----- 317
+ PS G + L + PG K + PG P
Sbjct: 373 ----------------AQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 318 PPHPDLGAGGLLSVKMENSWVQSP---PGPASC---QPGRQPLSPSATGDTR---GVPQP 368
P P GL S ++P PGP Q G S TG T+ +P P
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Query: 369 SWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNP-QPGDSRSQKPELQP 427
+ P Q A P + A P + P P +P QPG ++ P QP
Sbjct: 477 AKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK--PPSQQP 534
Query: 428 HRSHSEEATREPVLPLGLQS---CVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGN 484
+ P P QS + G +PL P PT S+
Sbjct: 535 GSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQP---PTVSPSAK-------------- 577
Query: 485 QGQHPGKGSPPGSSPLQGLENCLKEIPVPV-LRPAWPCSSAA------DRGPRRAEPRNW 537
Q P +G P PL L +P C + + P E + W
Sbjct: 578 --QPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGFNPNPHLTEVKEW 635
Query: 538 TADKEGLRAEACESAR-LGQGRGEAPTR-SLHLVSPQVFTSSCV----PACHQRGFKDPG 591
C+ R LG P+ L + V T+S V P Q K
Sbjct: 636 LCLN-------CQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDA 688
Query: 592 ATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVR---PLRFACVGGPSPSPSPGSSSSF 648
A + L + PK P + L G + P + P+P P S
Sbjct: 689 APKQD----LSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQ 744
Query: 649 SGSEGEDPRP-EPDLWKPLPQ-ERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTE 706
+ D +P +P + KP + KP +P S S P +T+
Sbjct: 745 DKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS------KVQSQAEEKTTPPLKTD 798
Query: 707 PRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELP 766
S T + VS + + AS + H P +K +++ P E P
Sbjct: 799 SAKPSQSFPPTGE---KVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEP 855
Query: 767 SESPPPELPPPEAAPPVLPASSLQPP 792
++ P P+A P +P S PP
Sbjct: 856 KKAQTKMSPKPDAKP--MPKGSPTPP 879
Score = 53.9 bits (128), Expect = 8e-07
Identities = 185/790 (23%), Positives = 260/790 (32%), Gaps = 135/790 (17%)
Query: 91 RGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQG 150
RG S+ SP ++P P + P SQP A P S + P
Sbjct: 290 RGESVKPSLPSPSKPPIQQPTPGKPPAQ-QPGHEKSQPGPAKPPAQPSGLTKPLAQ---- 344
Query: 151 SPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPG--NSPL 208
P +K +P T K LG P + S + S ++ G PG +P
Sbjct: 345 QPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPS--SEQPGPKALAQPPGVGKTPA 402
Query: 209 QGLINCLKEILVPGPRHPETS-----------PSFLPPLPSLGTSRLTRADLGPGSPPWA 257
Q PGP P T P P + G ++ GPG P
Sbjct: 403 QQ----------PGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIP-- 450
Query: 258 VKTEAVSGDCPLQ--GLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLL 315
+A G Q G +LP P G Q+ PG+ K S PG
Sbjct: 451 -AQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQ-PGSAKPPSQQPGSTK 508
Query: 316 TPPPHPDLGAGGLLSVKMENSWVQSPPG--PASCQPGRQ---PLSPSATGDTRGVPQPSW 370
PP P G + PP P S +P Q P PSA T+ V Q
Sbjct: 509 PPPQQP-----GPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGS 563
Query: 371 GPEAQAASASSS--------------PLEALEACLKGIPP--NGSSPSQLPPTSCSQ--- 411
G Q + S S PL L +P N ++ ++ T CS
Sbjct: 564 GKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGF 623
Query: 412 NPQPGDSRSQK---PELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSS 468
NP P + ++ Q R+ + P P P AP T ++ S
Sbjct: 624 NPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQ---------PKLKTAPVTTTSAVSK 674
Query: 469 SSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAW---PCSSA- 524
SS Q P K + P + E K+ P V +P P + A
Sbjct: 675 SSPQP-----------QQTSPKKDAAPKQDLSKAPEP--KKPPPLVKQPTLHGSPSAKAK 721
Query: 525 ----ADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVP 580
AD + A P+ + E +A + + Q + PT L + S T +P
Sbjct: 722 QPPEADSLSKPAPPKEPSVPSEQDKAPVADD-KPKQPKMVKPTTDL-VSSSSATTKPDIP 779
Query: 581 ACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSP 640
+ + + T P L SA KPS +S V P + P+
Sbjct: 780 SSKVQSQAEEKTTPP-----LKTDSA-KPS-----QSFPPTGEKVSPFDSKAIPRPASDS 828
Query: 641 S----PGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGG--TPAGSS 694
PG SS G + DP + + K + P KP SP P G AG +
Sbjct: 829 KIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQT 888
Query: 695 GGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTH 754
+P + P+ E L G+ D P SQ E G G G + ++
Sbjct: 889 VPTPQQSPKPQEQSRRFSLNLGSITD-APKSQ---PTTPQETVTGKLFGFG-ASIFSQAS 943
Query: 755 ERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGK---------PLQQELHS 805
+ G P P P P +A P P +S PP G+ P+++E
Sbjct: 944 NLISTAGQPG-PHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETK- 1001
Query: 806 LGAALAEKLD 815
A AEKL+
Sbjct: 1002 --APAAEKLE 1009
Score = 50.1 bits (118), Expect = 1e-05
Identities = 89/383 (23%), Positives = 128/383 (33%), Gaps = 49/383 (12%)
Query: 654 EDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPG-------GTPAGSSGGSPGEDPRRTE 706
E +PE + PL Q+ + P+P PG GTP S P + +++
Sbjct: 199 EQGKPEGIIKPPLQQQPPK------PIPKQQGPGRDPLQQDGTPKSISSQQP--EKIKSQ 250
Query: 707 PRYCSGLGAGTAQDP------CPVSQLEKRPRVSEAS--RGLELGHGRPRVAAKTHERLL 758
P G Q P P+ + RP+ +A RG + P + ++
Sbjct: 251 PPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 759 PQGPP--------ELPSESPPPELP----------PPEAAPPVLPASSLQPPCHCGKPLQ 800
P PP P + PP P P PPV P + +PP P +
Sbjct: 311 PGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAK 370
Query: 801 QELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRG 860
G+ EK LAQ +T + G +G + P
Sbjct: 371 PPAQQTGS---EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL 427
Query: 861 PRWAHGPGHRHLPYWRQKGPTR-PKPKILRGQGESCRAGDLQGLSR--GTARRARPLP-P 916
A PG P +Q GP + P + G+ + + G + S+ G A+ P P
Sbjct: 428 QSPAKAPGPTKTPV-QQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGP 486
Query: 917 DAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASP 976
PP + PG SQQ S+ P PA P G + P A Q SP
Sbjct: 487 AKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSP 546
Query: 977 PAASADADVPTSGVAPDGIPERP 999
SA G P +P
Sbjct: 547 AKPSAQQSTKPVSQTGSGKPLQP 569
Score = 38.9 bits (89), Expect = 0.025
Identities = 61/231 (26%), Positives = 85/231 (36%), Gaps = 46/231 (19%)
Query: 760 QGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLAT 819
Q PP P PPP PPP PP+ P +S +P P ++ + A L T
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTI---LPKKKLTVASPVTTATPLFDAVT 2460
Query: 820 ALAGLAQEVATMRTQ---VNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWR 876
L + A +R+ V R+ P P +S +P G + H P
Sbjct: 2461 TL----ETTAVLRSNGLPVTRICTTAPPPVPPKPSS----IPSGLVFTHRPE-------P 2505
Query: 877 QKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLS 936
K P PKP I + L T + P D P +P GL +SS L
Sbjct: 2506 SKPPIAPKPVIPQ-------------LPTTTQK-----PTDIHP-KPTGLSLTSSMTLNL 2546
Query: 937 STPSCHAAP-PAHPLLAHTGG-----HQSPLPPLVPAALPLQGASPPAASA 981
T + + P P PL H+ +S V LP + +P +SA
Sbjct: 2547 VTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSA 2597
Score = 35.4 bits (80), Expect = 0.28
Identities = 70/305 (22%), Positives = 107/305 (35%), Gaps = 62/305 (20%)
Query: 733 VSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPA------ 786
+S++ E + +V K E+ P+G + P + PP+ P + P P
Sbjct: 179 ISDSEASQEETTKKQKVVQK--EQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTP 236
Query: 787 ---SSLQP------PCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNR 837
SS QP P GKP+Q G + D L A T + + R
Sbjct: 237 KSISSQQPEKIKSQPPGTGKPIQ------GPTQTPQTDHAKLPLQRDASRPQTKQADIVR 290
Query: 838 -LGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCR 896
+P P P T + P A PGH Q GP +P +
Sbjct: 291 GESVKPSLPSPSKPPIQQPTPGKPP--AQQPGHEK----SQPGPAKPPAQP--------- 335
Query: 897 AGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGG 956
GL++ A++ + P P +PPG ++ P PA P TG
Sbjct: 336 ----SGLTKPLAQQPGTVKP---PVQPPG----------TTKPPAQPLGPAKPPAQQTGS 378
Query: 957 HQSPLPPLVPAAL---PLQGASPPAASADADVPTSGV-APDGIPERP--KEPSSLLGGVQ 1010
+ P AL P G +P A PT V P + ++P + P+ G +
Sbjct: 379 EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Query: 1011 RALQE 1015
+Q+
Sbjct: 439 TPVQQ 443
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 64.7 bits (156), Expect = 4e-10
Identities = 166/746 (22%), Positives = 236/746 (31%), Gaps = 143/746 (19%)
Query: 121 PDGPTSQPHLATTPTDSSCSSGPTGDGVQ--GSPLPIKTADKPWPTRKEGPGALGGEP-S 177
P+G P P GP D +Q G+P I ++ +P + + PG G+P
Sbjct: 203 PEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSI-SSQQPEKIKSQPPGT--GKPIQ 259
Query: 178 PPTHSPSRRKSHRGQERG-----TSEAGISPGNSPLQGLINCLK---------------- 216
PT +P + +R T +A I G S L + K
Sbjct: 260 GPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQP 319
Query: 217 --EILVPGPRHPETSPSFL------------PPLPSLGTSRLTRADLGPGSPPWAVKTEA 262
E PGP P PS L PP+ GT++ LGP PP
Sbjct: 320 GHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPP------- 372
Query: 263 VSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTP----- 317
+ PS G + L + PG K + PG P
Sbjct: 373 ----------------AQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 318 PPHPDLGAGGLLSVKMENSWVQSP---PGPASC---QPGRQPLSPSATGDTR---GVPQP 368
P P GL S ++P PGP Q G S TG T+ +P P
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Query: 369 SWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNP-QPGDSRSQKPELQP 427
+ P Q A P + A P + P P +P QPG ++ P QP
Sbjct: 477 AKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK--PPSQQP 534
Query: 428 HRSHSEEATREPVLPLGLQS---CVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGN 484
+ P P QS + G +PL P PT S+
Sbjct: 535 GSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQP---PTVSPSAK-------------- 577
Query: 485 QGQHPGKGSPPGSSPLQGLENCLKEIPVPV-LRPAWPCSSAA------DRGPRRAEPRNW 537
Q P +G P PL L +P C + + P E + W
Sbjct: 578 --QPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGFNPNPHLTEVKEW 635
Query: 538 TADKEGLRAEACESAR-LGQGRGEAPTR-SLHLVSPQVFTSSCV----PACHQRGFKDPG 591
C+ R LG P+ L + V T+S V P Q K
Sbjct: 636 LCLN-------CQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDA 688
Query: 592 ATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVR---PLRFACVGGPSPSPSPGSSSSF 648
A + L + PK P + L G + P + P+P P S
Sbjct: 689 APKQD----LSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQ 744
Query: 649 SGSEGEDPRP-EPDLWKPLPQ-ERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTE 706
+ D +P +P + KP + KP +P S S P +T+
Sbjct: 745 DKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS------KVQSQAEEKTTPPLKTD 798
Query: 707 PRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELP 766
S T + VS + + AS + H P +K +++ P E P
Sbjct: 799 SAKPSQSFPPTGE---KVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEP 855
Query: 767 SESPPPELPPPEAAPPVLPASSLQPP 792
++ P P+A P +P S PP
Sbjct: 856 KKAQTKMSPKPDAKP--MPKGSPTPP 879
Score = 53.9 bits (128), Expect = 8e-07
Identities = 185/790 (23%), Positives = 260/790 (32%), Gaps = 135/790 (17%)
Query: 91 RGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQG 150
RG S+ SP ++P P + P SQP A P S + P
Sbjct: 290 RGESVKPSLPSPSKPPIQQPTPGKPPAQ-QPGHEKSQPGPAKPPAQPSGLTKPLAQ---- 344
Query: 151 SPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPG--NSPL 208
P +K +P T K LG P + S + S ++ G PG +P
Sbjct: 345 QPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPS--SEQPGPKALAQPPGVGKTPA 402
Query: 209 QGLINCLKEILVPGPRHPETS-----------PSFLPPLPSLGTSRLTRADLGPGSPPWA 257
Q PGP P T P P + G ++ GPG P
Sbjct: 403 QQ----------PGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIP-- 450
Query: 258 VKTEAVSGDCPLQ--GLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLL 315
+A G Q G +LP P G Q+ PG+ K S PG
Sbjct: 451 -AQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQ-PGSAKPPSQQPGSTK 508
Query: 316 TPPPHPDLGAGGLLSVKMENSWVQSPPG--PASCQPGRQ---PLSPSATGDTRGVPQPSW 370
PP P G + PP P S +P Q P PSA T+ V Q
Sbjct: 509 PPPQQP-----GPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGS 563
Query: 371 GPEAQAASASSS--------------PLEALEACLKGIPP--NGSSPSQLPPTSCSQ--- 411
G Q + S S PL L +P N ++ ++ T CS
Sbjct: 564 GKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGF 623
Query: 412 NPQPGDSRSQK---PELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSS 468
NP P + ++ Q R+ + P P P AP T ++ S
Sbjct: 624 NPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQ---------PKLKTAPVTTTSAVSK 674
Query: 469 SSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAW---PCSSA- 524
SS Q P K + P + E K+ P V +P P + A
Sbjct: 675 SSPQP-----------QQTSPKKDAAPKQDLSKAPEP--KKPPPLVKQPTLHGSPSAKAK 721
Query: 525 ----ADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVP 580
AD + A P+ + E +A + + Q + PT L + S T +P
Sbjct: 722 QPPEADSLSKPAPPKEPSVPSEQDKAPVADD-KPKQPKMVKPTTDL-VSSSSATTKPDIP 779
Query: 581 ACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSP 640
+ + + T P L SA KPS +S V P + P+
Sbjct: 780 SSKVQSQAEEKTTPP-----LKTDSA-KPS-----QSFPPTGEKVSPFDSKAIPRPASDS 828
Query: 641 S----PGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGG--TPAGSS 694
PG SS G + DP + + K + P KP SP P G AG +
Sbjct: 829 KIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQT 888
Query: 695 GGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTH 754
+P + P+ E L G+ D P SQ E G G G + ++
Sbjct: 889 VPTPQQSPKPQEQSRRFSLNLGSITD-APKSQ---PTTPQETVTGKLFGFG-ASIFSQAS 943
Query: 755 ERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGK---------PLQQELHS 805
+ G P P P P +A P P +S PP G+ P+++E
Sbjct: 944 NLISTAGQPG-PHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETK- 1001
Query: 806 LGAALAEKLD 815
A AEKL+
Sbjct: 1002 --APAAEKLE 1009
Score = 50.1 bits (118), Expect = 1e-05
Identities = 89/383 (23%), Positives = 128/383 (33%), Gaps = 49/383 (12%)
Query: 654 EDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPG-------GTPAGSSGGSPGEDPRRTE 706
E +PE + PL Q+ + P+P PG GTP S P + +++
Sbjct: 199 EQGKPEGIIKPPLQQQPPK------PIPKQQGPGRDPLQQDGTPKSISSQQP--EKIKSQ 250
Query: 707 PRYCSGLGAGTAQDP------CPVSQLEKRPRVSEAS--RGLELGHGRPRVAAKTHERLL 758
P G Q P P+ + RP+ +A RG + P + ++
Sbjct: 251 PPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 759 PQGPP--------ELPSESPPPELP----------PPEAAPPVLPASSLQPPCHCGKPLQ 800
P PP P + PP P P PPV P + +PP P +
Sbjct: 311 PGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAK 370
Query: 801 QELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRG 860
G+ EK LAQ +T + G +G + P
Sbjct: 371 PPAQQTGS---EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL 427
Query: 861 PRWAHGPGHRHLPYWRQKGPTR-PKPKILRGQGESCRAGDLQGLSR--GTARRARPLP-P 916
A PG P +Q GP + P + G+ + + G + S+ G A+ P P
Sbjct: 428 QSPAKAPGPTKTPV-QQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGP 486
Query: 917 DAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASP 976
PP + PG SQQ S+ P PA P G + P A Q SP
Sbjct: 487 AKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSP 546
Query: 977 PAASADADVPTSGVAPDGIPERP 999
SA G P +P
Sbjct: 547 AKPSAQQSTKPVSQTGSGKPLQP 569
Score = 38.9 bits (89), Expect = 0.025
Identities = 61/231 (26%), Positives = 85/231 (36%), Gaps = 46/231 (19%)
Query: 760 QGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLAT 819
Q PP P PPP PPP PP+ P +S +P P ++ + A L T
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTI---LPKKKLTVASPVTTATPLFDAVT 2460
Query: 820 ALAGLAQEVATMRTQ---VNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWR 876
L + A +R+ V R+ P P +S +P G + H P
Sbjct: 2461 TL----ETTAVLRSNGLPVTRICTTAPPPVPPKPSS----IPSGLVFTHRPE-------P 2505
Query: 877 QKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLS 936
K P PKP I + L T + P D P +P GL +SS L
Sbjct: 2506 SKPPIAPKPVIPQ-------------LPTTTQK-----PTDIHP-KPTGLSLTSSMTLNL 2546
Query: 937 STPSCHAAP-PAHPLLAHTGG-----HQSPLPPLVPAALPLQGASPPAASA 981
T + + P P PL H+ +S V LP + +P +SA
Sbjct: 2547 VTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSA 2597
Score = 35.4 bits (80), Expect = 0.28
Identities = 70/305 (22%), Positives = 107/305 (35%), Gaps = 62/305 (20%)
Query: 733 VSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPA------ 786
+S++ E + +V K E+ P+G + P + PP+ P + P P
Sbjct: 179 ISDSEASQEETTKKQKVVQK--EQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTP 236
Query: 787 ---SSLQP------PCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNR 837
SS QP P GKP+Q G + D L A T + + R
Sbjct: 237 KSISSQQPEKIKSQPPGTGKPIQ------GPTQTPQTDHAKLPLQRDASRPQTKQADIVR 290
Query: 838 -LGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCR 896
+P P P T + P A PGH Q GP +P +
Sbjct: 291 GESVKPSLPSPSKPPIQQPTPGKPP--AQQPGHEK----SQPGPAKPPAQP--------- 335
Query: 897 AGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGG 956
GL++ A++ + P P +PPG ++ P PA P TG
Sbjct: 336 ----SGLTKPLAQQPGTVKP---PVQPPG----------TTKPPAQPLGPAKPPAQQTGS 378
Query: 957 HQSPLPPLVPAAL---PLQGASPPAASADADVPTSGV-APDGIPERP--KEPSSLLGGVQ 1010
+ P AL P G +P A PT V P + ++P + P+ G +
Sbjct: 379 EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Query: 1011 RALQE 1015
+Q+
Sbjct: 439 TPVQQ 443
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 64.3 bits (155), Expect = 6e-10
Identities = 198/773 (25%), Positives = 259/773 (33%), Gaps = 196/773 (25%)
Query: 137 SSCSSGPTGDGVQGSPLPIKTADKPWPTRK-------EGPGALGGEPSPPTHSPSRRKSH 189
S SSG G G G P + + WP+ K E P L P PP+ S R
Sbjct: 1408 SGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLD- 1466
Query: 190 RGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADL 249
Q ++ AGI L L + + PG HP P L +A
Sbjct: 1467 --QVIHSNPAGIQQA---LAQLSSRQGSVTAPGG-HPRHKPG------------LPQAPQ 1508
Query: 250 GPGS-PPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQEN------PG 302
GP PP + + V+ L P ++ P GVG P
Sbjct: 1509 GPSPRPPTRYEPQRVNSG---------LSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPK 1559
Query: 303 AWKRGSGGPGYLLT---PPPHPDLGAGGLLSVKMENSWVQSPPG---------------- 343
+R P L PPPH + G L K E Q+
Sbjct: 1560 RRERPPRKPELLQEESLPPPH----SSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLH 1615
Query: 344 ---------PASCQPGRQPLSP-----------SATG-DTRGVPQPSWGPEAQAASASSS 382
P+S +P +PLSP S +G D G Q S GP S SS
Sbjct: 1616 TATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGP----CSQRSS 1671
Query: 383 PLEALEACLKGIP--PNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPV 440
P L+ +G P P GSSP P + P PG ++P PH +E RE
Sbjct: 1672 PDGGLKGAAEGPPKRPGGSSPLNAVPC---EGP-PGSEPPRRPPPAPHDGDRKELPREQP 1727
Query: 441 LPLGLQSCVRD---------GPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGK 491
LP G R GP RP G P F +S D D D VG+ +
Sbjct: 1728 LPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPVQFGTS---DKDSDLRLVVGDSLK---- 1780
Query: 492 GSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACES 551
+ + + + IPV P ++A+ AEP++ D E
Sbjct: 1781 ------AEKELTASVTEAIPVSRDWELLPSAAAS------AEPQSKNLDSGHCVPE---- 1824
Query: 552 ARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQ--------RGFKDPGATRPGV-----W 598
P+ S + P+VF S P+ Q + + G RPG +
Sbjct: 1825 ----------PSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPY 1874
Query: 599 RWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSS-----SSFSGSEG 653
R P P P+P L S L L + L F+ + P SF S
Sbjct: 1875 RSQPLYLPPGPAPPSALLSGL--ALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPA 1932
Query: 654 EDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGL 713
P P PD L Q R LPS P P P G SG P SG
Sbjct: 1933 FCPSPLPD--TSLLQVRQDLPS---PSDFYSTP-LQPGGQSGFLP------------SGA 1974
Query: 714 GAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPE 773
A P SQL P V+ S P ++ LLP GP PP
Sbjct: 1975 PAQQMLLPMVDSQL---PVVNFGSLPPAPPPAPPPLS------LLPVGP-----ALQPPS 2020
Query: 774 L---PPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAG 823
L PPP A VLP+ + P G+ ELH + + +L++ L G
Sbjct: 2021 LAVRPPPAPATRVLPSPARPFPASLGR---AELHPVELKPFQDYQKLSSNLGG 2070
Score = 55.1 bits (131), Expect = 3e-07
Identities = 105/426 (24%), Positives = 133/426 (31%), Gaps = 111/426 (26%)
Query: 650 GSEGEDPRPEPDLWKPLPQERDRLPSCKP----PVPLSPCPGGTPAGSSGGSPGEDPRRT 705
G +G P EP K E R P +P P P P P PAG + G PG+ P R
Sbjct: 375 GKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAG-NWGPPGDYPDR- 432
Query: 706 EPRYCSGLGAGTAQDPCPVSQLEK-RPRVSEASRGLELGHGRPRVAAKTHERLL------ 758
G + P P + E R R ++S + L R R + ER +
Sbjct: 433 --------GGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRA 484
Query: 759 -----------------------PQGPPELPSESPPP-----ELPPPEAAPPV-LPASSL 789
P PP PS PP ELP P A PP P
Sbjct: 485 ACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPET 544
Query: 790 QPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMG 849
+P P Q + G A A T ++G +T PQ P G
Sbjct: 545 EPEEPAQAPPAQSTPTPGVAAA------PTLVSGGGSTSSTSSGSFEASPVEPQLPSKEG 598
Query: 850 QASWMWTLPRGPRWAHGPGHRHLPYWRQK----GPTR---------PK------PKILRG 890
P P P +P K GPTR PK P+ R
Sbjct: 599 --------PEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQ 650
Query: 891 QGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPL 950
Q E Q + + PP P PP Q + APP P
Sbjct: 651 QQEQLLKQQQQ--HQWQQHQQGSAPPTPVPPSPP-------QPVTLGAVPAPQAPPPPPK 701
Query: 951 LAHTG--GHQSPLPP--------LVPAALP---LQGASPPAASADADVPTSGVAPDGIPE 997
+ G G P+PP ++P + LQG P D GV P G+
Sbjct: 702 ALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPP------LDFYPPGVHPSGLVP 755
Query: 998 RPKEPS 1003
R + S
Sbjct: 756 RERSDS 761
Score = 52.8 bits (125), Expect = 2e-06
Identities = 215/918 (23%), Positives = 280/918 (30%), Gaps = 188/918 (20%)
Query: 187 KSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTR 246
+S G+ER EA GNSP K R PET P PP P R
Sbjct: 362 QSASGEER-PPEADGKKGNSP-NSEPPTPKTAWAETSRPPETEPG--PPAPKPPLPPPHR 417
Query: 247 ADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQD------RHPSPSGVG------- 293
G PP GD P +G C PE +D R S S +
Sbjct: 418 GPAGNWGPP---------GDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERAR 468
Query: 294 ------NRRLQENPGA--------WKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQ 339
RR+QE A G P L P A
Sbjct: 469 RRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAA-------------P 515
Query: 340 SPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGS 399
S P P P P P+ + P+ AQA A S+P + A + GS
Sbjct: 516 STPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGS 575
Query: 400 SPS-------------QLPPTSCSQNPQ--PGDSRSQKPELQPHRSHSEEATREPVLPLG 444
+ S QLP + P+ P + P+++P + P LG
Sbjct: 576 TSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLG 635
Query: 445 LQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLE 504
+ P R + W QG P PP SP Q +
Sbjct: 636 YPKYQKSLPPR-FQRQQQEQLLKQQQQHQWQQH------QQGSAPPTPVPP--SPPQPV- 685
Query: 505 NCLKEIPVPVLRPAWPCS--SAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAP 562
L +P P P P + A P P N+ D + RL QGR
Sbjct: 686 -TLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNF--DPRWMMIPPYVDPRLLQGR---- 738
Query: 563 TRSLHLVSPQVFTSSCVPACHQRGFKDPGAT--------RPGVWR------------WLP 602
L P V S VP R D G + P + R W+
Sbjct: 739 -PPLDFYPPGVHPSGLVP----RERSDSGGSSSEPFDRHAPAMLRERGTPPVDPKLAWVG 793
Query: 603 EGSAPKPSPLHCLESALRGILPV--RPLRFACVGGPSPSPSPGSSSSF--SGSEG----- 653
+ P+ L S LR + +R P P P S F +G+ G
Sbjct: 794 DVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPISR 853
Query: 654 ---EDPRPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYC 710
E+P P P W P D + + P P P A +G G P R
Sbjct: 854 FPLEEPGPRPLPW---PPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPAR------ 904
Query: 711 SGLGAGTAQDPCP--VSQLEKR--PRVSEASRGL--ELGHGRPRVAA-------KTHERL 757
G+G+G P P S+ E R PR + RG+ E PR A T
Sbjct: 905 -GVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEE 963
Query: 758 LPQGPPELPSESPPPELPPP-EAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDR 816
LP P E E+P P P P + L PP P + E++
Sbjct: 964 LPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYS---YERVGP 1020
Query: 817 LATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPR--WAHGPGHRHLPY 874
+ G + A R G R +G S+ R GP H P
Sbjct: 1021 TSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPAPR 1080
Query: 875 WRQKGPTR---------PKPKILRGQ--GESCRAGDLQGLSR-------GTARRA--RPL 914
R TR PK + RG G DL + GT + P
Sbjct: 1081 GRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLAPP 1140
Query: 915 PPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGA 974
PP APP+ P + ++ + P P GG + P P + P G
Sbjct: 1141 PPGAPPSPAPARFTARGGRVFT--------PRGVPSRRGRGGGRPP-PQVCP------GW 1185
Query: 975 SPPAASADADVPTSGVAP 992
SPPA S P +G P
Sbjct: 1186 SPPAKSLAPKKPPTGPLP 1203
Score = 48.1 bits (113), Expect = 4e-05
Identities = 197/861 (22%), Positives = 283/861 (32%), Gaps = 162/861 (18%)
Query: 114 RGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPL---PIKTADK---PWPTRKE 167
+G+ S P P P+LA+ P G +G G P+ P++ PWP +
Sbjct: 819 KGMRSETPPVPPPPPYLASYP-------GFPENGAPGPPISRFPLEEPGPRPLPWPPGSD 871
Query: 168 GPGALGGEPSPPTHSPSRRKSHR--GQERGTSEA-GISPGNSPLQGLINCLKEILVPGPR 224
+ + PP P + ++ + G E G A G+ G QG P PR
Sbjct: 872 EVAKI--QTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGG---QG---------PPPPR 917
Query: 225 HPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELP---- 280
+ + P P G+SR PG+PP +G ++ELP
Sbjct: 918 RESRTETRWGPRP--GSSRRGIPPEEPGAPPRR------AGPIKKPPPPTKVEELPPKPL 969
Query: 281 EAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQS 340
E D P P P K G G PP+ +L + ++ +
Sbjct: 970 EQGDETPKPP---------KPDPLKITKGKLGGPKETPPNGNLSP----APRLRRDYSYE 1016
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACL-----KGIP 395
GP SC+ GR A G RG G A S G P
Sbjct: 1017 RVGPTSCR-GRGRGEYFARG--RGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGP 1073
Query: 396 -----PNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
P G + S+ P R + E S+ A + P + +
Sbjct: 1074 NHPPAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLT 1133
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHP-GKGSPPGSSPLQGLENCLKE 509
P P P G P S + + T +P G + G G PP
Sbjct: 1134 QVPLAP-PPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPP-------------- 1178
Query: 510 IPVPVLRPAW--PCSSAADRGPRRAE-PRNWTADKEGL---------RAEACESARLGQG 557
P + P W P S A + P P + KE L R + + +G
Sbjct: 1179 ---PQVCPGWSPPAKSLAPKKPPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGME 1235
Query: 558 RGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLES 617
GE P R H + Q P + + A R GS KPS L +
Sbjct: 1236 DGERPRRRRHGRAQQ---QDKPPRFRRLKQERENAAR---------GSEGKPSLT--LPA 1281
Query: 618 ALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQ------ERD 671
+ G P L V P+P + S S + E W+ + ER
Sbjct: 1282 SAPG--PEEALTTVTVA-PAPRRAAAKSPDLSNQNSDQANEE---WETASESSDFTSERR 1335
Query: 672 RLPSCKPPVPLSPCPGGTPAGSSGGS-PGEDP--RRTEPRYCSGLGAGTAQDPCPVSQLE 728
PPV L+P GTP G GG+ PG R + L + P + +
Sbjct: 1336 GDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGMERQ 1395
Query: 729 KR---PRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLP 785
R P S G G G +T P + SP PPE PP LP
Sbjct: 1396 NRRPGPGGKAGSSGSSSGGGGGGPGGRTG----PGRGDKRSWPSPKNRSRPPEERPPGLP 1451
Query: 786 ASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGP 845
P L Q +HS A + + L +L++ + R + L + PQGP
Sbjct: 1452 LPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPG-LPQAPQGP 1510
Query: 846 GPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSR 905
P + P+ + G P++ + GP ++RG G + R D G+S
Sbjct: 1511 SPRPPTRY------EPQRVNS-GLSSDPHFEEPGP------MVRGVGGTPR--DSAGVS- 1554
Query: 906 GTARRARPLPP---DAPPAEP 923
P PP + PP +P
Sbjct: 1555 -------PFPPKRRERPPRKP 1568
Score = 40.0 bits (92), Expect = 0.011
Identities = 114/488 (23%), Positives = 156/488 (31%), Gaps = 136/488 (27%)
Query: 52 GGQPRHSLHLTALVQLVKEIPEFLFGEVK---GAMDSPESESRGASLDGERASPEAAAAR 108
GG PRH L Q P + + G P E G + G +P +A
Sbjct: 1494 GGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGV 1553
Query: 109 EPCPLRGLLSCLPDGPTSQPHL----ATTPTDSS--CSSGPTGDGVQGSPLPIKTADKPW 162
P P + + P +P L + P SS S P G G Q
Sbjct: 1554 SPFPPKRR-----ERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAE----------- 1597
Query: 163 PTRKEGPGALGGEPSPPTHSPSRRKSHR------------------GQERGTSEAGIS-P 203
+R G AL H+ + RKS+R G E S++G+
Sbjct: 1598 -SRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLS 1656
Query: 204 GNSPLQGLINCLKEILVPGPRHPETSP-------SFLPPLPSLGTSRLTRADLG--PGS- 253
G+S + GP +SP + PP G+S L PGS
Sbjct: 1657 GDSQVSS-----------GPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEGPPGSE 1705
Query: 254 PPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGY 313
PP GD KELP Q P P +G R Q + G P +
Sbjct: 1706 PPRRPPPAPHDGD---------RKELPREQPLPPGP--IGTERSQRTDRGTEPGPIRPSH 1754
Query: 314 LLTPP---------------------PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQ 352
PP +L A ++ + W P AS +P +
Sbjct: 1755 RPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSK 1814
Query: 353 PLS-------PSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLP 405
L PS++G R P+ +G +A SSS + G+ SQL
Sbjct: 1815 NLDSGHCVPEPSSSGQ-RLYPEVFYG----SAGPSSSQISG-----------GAMDSQLH 1858
Query: 406 PTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTS 465
P S G R P L P+RS P P L S LA +G
Sbjct: 1859 PNS-------GGFRPGTPSLHPYRSQPLYLPPGPAPPSALLS--------GLALKGQFLD 1903
Query: 466 FSSSSSTD 473
FS+ +T+
Sbjct: 1904 FSTMQATE 1911
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 63.9 bits (154), Expect = 7e-10
Identities = 138/594 (23%), Positives = 184/594 (30%), Gaps = 103/594 (17%)
Query: 280 PEAQ-DRHPSPSGVG---------NRRLQENPGAW----KRGSGGPGYLLTPPPHPDLGA 325
PEA + HPS + G +R Q PGA + GG G +L+ PP G
Sbjct: 179 PEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGG 238
Query: 326 GGLLSVKMENSWVQSPP----------GPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQ 375
G SV N Q PP G + P + P +P G+ P P+ P
Sbjct: 239 GAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPH-- 296
Query: 376 AASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEA 435
+ + P AL P N +S S P P PG S Q
Sbjct: 297 -VTPNLPPPPALR------PLNNASAS---PPGLGAQPLPGHLPSPHAMGQGMGGLPPGP 346
Query: 436 TREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS-- 493
+ P L S S P P P S SSSSS S + P +
Sbjct: 347 EKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALP 406
Query: 494 --PPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACES 551
P P L + P +P+ P + +GP P
Sbjct: 407 SYPHSFPPPTSLS--VSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPP 464
Query: 552 ARLGQGRGEAPTRSLH----LVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAP 607
+ Q P + H Q Q+ + G PG + EG +
Sbjct: 465 STGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSS 524
Query: 608 KPSPLHCLESALRGILPVRP-----------LRFACVGGPSPSPSPGSSSSFSGSEG--- 653
+ + + +L + P P + ++ G P S S+SS S S+G
Sbjct: 525 HHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYP 584
Query: 654 -------EDPRPEPDLWKPLP---QERDRLPSCKPPVPLSPC-------PGGTPAGSSGG 696
+ P+ P + P+P L + V SP PG P G
Sbjct: 585 CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAP 644
Query: 697 SPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHER 756
SPG T P Y G P + P S G +P
Sbjct: 645 SPGAYKTATPPGYKPG--------SPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP 696
Query: 757 LLPQGPPELPSESPPPELP---PPEAA---------------PPVLPASSLQPP 792
L P GP LPS PPP P PP +A PV PA S PP
Sbjct: 697 LPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPP 750
Score = 55.1 bits (131), Expect = 3e-07
Identities = 165/657 (25%), Positives = 215/657 (32%), Gaps = 141/657 (21%)
Query: 405 PPTSCSQNPQPGDSRSQKPE--LQPHRSHSE---EATREPVLPLGLQSCVRDGPSRP-LA 458
PP +PQP DS ++PE +PH S + A EP Q+ P P L
Sbjct: 161 PPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLY 220
Query: 459 PRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPA 518
P GT S S VG G + GK PP ++P+ + P P P
Sbjct: 221 PGGTGGVLSGPPMGPKGGGAASSVG--GPNGGKQHPPPTTPISVSSSGASGAP-PTKPPT 277
Query: 519 WPCSSAADRGPRRAEPRNWTADKEGLRAEAC-----ESARLGQGRGEAPTRSLHLVSPQV 573
P P P N+ L ++ G G P HL SP
Sbjct: 278 TPVGGG--NLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPG-HLPSP-- 332
Query: 574 FTSSCVPACHQRGFKDPGATRPGVWRWLPE-GSAPKPSPLHCLESALRGILPVRPLRFAC 632
H G + G PG PE G PSP H L A P P+RF
Sbjct: 333 ---------HAMG-QGMGGLPPG-----PEKGPTLAPSP-HSLPPA-SSSAPAPPMRFP- 374
Query: 633 VGGPSPSPSPGSSSSFSGSEGEDPRPE----PDLWKPLPQERDRLPSCKPPV-------- 680
S S + SSSS S S P P P P S +PP
Sbjct: 375 YSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434
Query: 681 -------PLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVS-------- 725
P P P G +S PG P T GA + P PVS
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPST--------GAQSTAHP-PVSTHHHHHQQ 485
Query: 726 QLEKRPRVSEASRGLELGHG-----------RPRVAAKTHERLLPQGPPELPSESP---- 770
Q +++ + + + + HG P +H P L S P
Sbjct: 486 QQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPG 545
Query: 771 PPELPPPEA----------APPVLPASSLQPPCHCGK-PLQQELHSLGAALA----EKLD 815
P LPPP + PPV +S+ G P S G A +
Sbjct: 546 PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVP 605
Query: 816 RLATALAGLAQEVATMRTQ-VNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPY 874
+ T+ A L+ +AT+ + P GP P G+ + P + A PG++
Sbjct: 606 TVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRA---PSPGAYKTATPPGYK---- 658
Query: 875 WRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPL--PPDAPPAEPPGLHCSSSQ 932
P P P G R G GT + P P PPA P G
Sbjct: 659 -----PGSP-PSFRTGTPPGYR-GTSPPAGPGTFKPGSPTVGPGPLPPAGPSG------- 704
Query: 933 QLLSSTPSCHAAPPAHPLLAHT-------GGHQSPLPPLVPAALPLQGASPPAASAD 982
L S P AAP + P L+ T +++P P+ PA P SPP D
Sbjct: 705 --LPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSP----SPPPKVVD 755
Score = 50.4 bits (119), Expect = 8e-06
Identities = 98/395 (24%), Positives = 119/395 (30%), Gaps = 104/395 (26%)
Query: 637 SPSPSPGSSSSFSGSEGEDPRP--EPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSS 694
SP S S SG RP P L+ P PQ D P +P P P TP G
Sbjct: 137 SPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR-QPEASFEPHPSVTPTGYH 195
Query: 695 G-----------GSPGEDPRRTE--PRYCSGLGAGTAQDPC----------PVSQLEKRP 731
PG P + P G+ +G P P + P
Sbjct: 196 APMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPP 255
Query: 732 RVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPP-------PELPPPEAAPPVL 784
+ S G P T P G LPS PP P LPPP A P+
Sbjct: 256 PTTPISVSSSGASGAPPTKPPT----TPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLN 311
Query: 785 PASSLQPPCHCGKPLQQEL---HSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRR 841
AS+ PP +PL L H++G +G
Sbjct: 312 NASA-SPPGLGAQPLPGHLPSPHAMGQG----------------------------MGGL 342
Query: 842 PQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQ 901
P GP +GP A P LP P P S A
Sbjct: 343 PPGP------------EKGPTLA--PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAA--S 386
Query: 902 GLSRGTARRARPLP-----PDAPPAEPPGLHCSSSQQ--------LLSSTPSCHAAPPAH 948
S ++ A P P P P + PP S S Q L S PP
Sbjct: 387 SSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPP 446
Query: 949 P---LLAHTGGHQSPLPPLVPAALPLQGASPPAAS 980
P LLA++ H P PP A A PP ++
Sbjct: 447 PYGRLLANSNAHPGPFPPSTGAQ---STAHPPVST 478
Score = 43.5 bits (101), Expect = 0.001
Identities = 103/474 (21%), Positives = 141/474 (29%), Gaps = 81/474 (17%)
Query: 86 PESESRGASLDGERASPEAAAAREPCP--LRGLLSCLPDGPTSQPHLATTPTDSSCSSGP 143
P + G + G PE P P L S P P P+ +++ + ++ SS
Sbjct: 330 PSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSS 389
Query: 144 TGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISP 203
+ SP P A +P P +L PP ++ S +G P
Sbjct: 390 SSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQG-------P 442
Query: 204 GNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAV 263
P G +L HP P PS G PP V T
Sbjct: 443 PPPPPYG------RLLANSNAHPGPFP------PSTGAQ-------STAHPP--VSTHHH 481
Query: 264 SGDCPLQGLLHCLKELPEAQDRH----PSPSGV------GNRRLQENPGAWKRGSGG--- 310
Q ++ + Q H P P G G +P A G
Sbjct: 482 HHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRP 541
Query: 311 --PGYLLTPPPHPDL-----GAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTR 363
PG PPPH + G G NS + G C PS + +
Sbjct: 542 YPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCS------HPSPSQGPQ 595
Query: 364 GVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQL-PPTSCSQNPQPGDSRSQK 422
G P P P + SS+ L + A + P + S PP + P PG ++
Sbjct: 596 GAPYPF--PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTAT 653
Query: 423 PELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSST--DWDLDFGS 480
P +P P ++ G R +P P +F S T L
Sbjct: 654 P-----------PGYKPGSPPSFRTGTPPG-YRGTSPPAGPGTFKPGSPTVGPGPLPPAG 701
Query: 481 PVGNQGQHPGKGSPPGSSPLQGL--------ENCLKEIPVPVLRPAWPCSSAAD 526
P G P +P PL E E PVP R P D
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVD 755
Score = 39.7 bits (91), Expect = 0.015
Identities = 168/750 (22%), Positives = 229/750 (30%), Gaps = 157/750 (20%)
Query: 127 QPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRR 186
+PH + TPT P + +P P P + PG GG S P P
Sbjct: 184 EPHPSVTPTGYHAPMEPPTSRMFQAP-----PGAPPPHPQLYPGGTGGVLSGPPMGP--- 235
Query: 187 KSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTR 246
+ G + + + N G +HP PP + S
Sbjct: 236 ------KGGGAASSVGGPNG---------------GKQHP-------PPTTPISVS---- 263
Query: 247 ADLGPGSPPWAVKTEAVSGDC-----PLQGLLHCLKELPEAQDRHP------SPSGVGNR 295
+ G+PP T V G P H LP P SP G+G +
Sbjct: 264 SSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
Query: 296 RLQ---ENPGAWKRGSGG------PGYLLTPPPH---PDLGAGGLLSVKMENSWVQSPPG 343
L +P A +G GG G L P PH P + ++ S S
Sbjct: 324 PLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSA 383
Query: 344 PASCQPGRQPLSPSATGDTRGVPQ-PSWGPEAQAASASSSPLEALEACL-------KGIP 395
AS S S ++ +P P P + S S+ P + + L +G P
Sbjct: 384 AASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPP 443
Query: 396 PNGSSPSQLPPTSCSQNPQPGDSRSQK---PELQPHRSHSEEATREPVLPLGLQSCVRD- 451
P L ++ P P + +Q P + H H ++ ++ Q +
Sbjct: 444 PPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQH 503
Query: 452 -GPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS----PPGSSPLQGLENC 506
G S P P P SS P GS PPG + L
Sbjct: 504 HGNSGPPPPGAFPHPLEGGSSHH--------AHPYAMSPSLGSLRPYPPGPAHL------ 549
Query: 507 LKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAP---- 562
P P + ++ S A GP + N ++ + C QG AP
Sbjct: 550 ----PPPHSQVSY--SQAGPNGPPVSSSSN-SSSSTSQGSYPCSHPSPSQGPQGAPYPFP 602
Query: 563 -----TRSLHLVSPQVFTSSCVPACHQRGFKDPG-------ATRPGVWRWL-PEGSAP-- 607
T S +S + T + PA ++ PG A PG ++ P G P
Sbjct: 603 PVPTVTTSSATLSTVIATVASSPAGYKTA-SPPGPPPYGKRAPSPGAYKTATPPGYKPGS 661
Query: 608 KPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPE-PDLWKPL 666
PS RG P G P+ P P + SG P P P PL
Sbjct: 662 PPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPL 721
Query: 667 --------PQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTA 718
P E P + PVP + P P S R G +
Sbjct: 722 SATQIKQEPAEEYETP--ESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCAR 779
Query: 719 QD----PCPVSQL--------EKRPRVSEASRGLELGHGRPRVAAKTHER---------- 756
D P S+L EK R +E E R R K ER
Sbjct: 780 SDLYFVPLEGSKLAKKRADLVEKVRREAEQRAREEKEREREREREKEREREKERELERSV 839
Query: 757 -LLPQG--PPELPSESPPPELPPPEAAPPV 783
L +G P E PS P P PP E V
Sbjct: 840 KLAQEGRAPVECPSLGPVPHRPPFEPGSAV 869
Score = 32.3 bits (72), Expect = 2.4
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 902 GLSRGTARRARP--------LPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAP---PAHPL 950
GLS+G AR P PPD+ P +P +S + S TP+ + AP P +
Sbjct: 150 GLSQGPARPYHPPPLFPPSPQPPDSTPRQPE----ASFEPHPSVTPTGYHAPMEPPTSRM 205
Query: 951 LAHTGGHQSPLPPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERP 999
G P P L P + PP +S P+G + P
Sbjct: 206 FQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
Score = 31.2 bits (69), Expect = 5.3
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 915 PPDAPPAEPPGLHCSSSQQLLSSTP-SCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQG 973
PP APP P L+ + +LS P A + GG Q P PP P ++ G
Sbjct: 209 PPGAPPPHPQ-LYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP-PPTTPISVSSSG 266
Query: 974 AS--PPAASADADVPTSGVAPDGIPERP 999
AS PP PT+ V +P P
Sbjct: 267 ASGAPPTKP-----PTTPVGGGNLPSAP 289
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 63.9 bits (154), Expect = 7e-10
Identities = 138/594 (23%), Positives = 184/594 (30%), Gaps = 103/594 (17%)
Query: 280 PEAQ-DRHPSPSGVG---------NRRLQENPGAW----KRGSGGPGYLLTPPPHPDLGA 325
PEA + HPS + G +R Q PGA + GG G +L+ PP G
Sbjct: 179 PEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGG 238
Query: 326 GGLLSVKMENSWVQSPP----------GPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQ 375
G SV N Q PP G + P + P +P G+ P P+ P
Sbjct: 239 GAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPH-- 296
Query: 376 AASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEA 435
+ + P AL P N +S S P P PG S Q
Sbjct: 297 -VTPNLPPPPALR------PLNNASAS---PPGLGAQPLPGHLPSPHAMGQGMGGLPPGP 346
Query: 436 TREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS-- 493
+ P L S S P P P S SSSSS S + P +
Sbjct: 347 EKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALP 406
Query: 494 --PPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACES 551
P P L + P +P+ P + +GP P
Sbjct: 407 SYPHSFPPPTSLS--VSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPP 464
Query: 552 ARLGQGRGEAPTRSLH----LVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAP 607
+ Q P + H Q Q+ + G PG + EG +
Sbjct: 465 STGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSS 524
Query: 608 KPSPLHCLESALRGILPVRP-----------LRFACVGGPSPSPSPGSSSSFSGSEG--- 653
+ + + +L + P P + ++ G P S S+SS S S+G
Sbjct: 525 HHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYP 584
Query: 654 -------EDPRPEPDLWKPLP---QERDRLPSCKPPVPLSPC-------PGGTPAGSSGG 696
+ P+ P + P+P L + V SP PG P G
Sbjct: 585 CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAP 644
Query: 697 SPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHER 756
SPG T P Y G P + P S G +P
Sbjct: 645 SPGAYKTATPPGYKPG--------SPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP 696
Query: 757 LLPQGPPELPSESPPPELP---PPEAA---------------PPVLPASSLQPP 792
L P GP LPS PPP P PP +A PV PA S PP
Sbjct: 697 LPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPP 750
Score = 55.1 bits (131), Expect = 3e-07
Identities = 165/657 (25%), Positives = 215/657 (32%), Gaps = 141/657 (21%)
Query: 405 PPTSCSQNPQPGDSRSQKPE--LQPHRSHSE---EATREPVLPLGLQSCVRDGPSRP-LA 458
PP +PQP DS ++PE +PH S + A EP Q+ P P L
Sbjct: 161 PPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLY 220
Query: 459 PRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPA 518
P GT S S VG G + GK PP ++P+ + P P P
Sbjct: 221 PGGTGGVLSGPPMGPKGGGAASSVG--GPNGGKQHPPPTTPISVSSSGASGAP-PTKPPT 277
Query: 519 WPCSSAADRGPRRAEPRNWTADKEGLRAEAC-----ESARLGQGRGEAPTRSLHLVSPQV 573
P P P N+ L ++ G G P HL SP
Sbjct: 278 TPVGGG--NLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPG-HLPSP-- 332
Query: 574 FTSSCVPACHQRGFKDPGATRPGVWRWLPE-GSAPKPSPLHCLESALRGILPVRPLRFAC 632
H G + G PG PE G PSP H L A P P+RF
Sbjct: 333 ---------HAMG-QGMGGLPPG-----PEKGPTLAPSP-HSLPPA-SSSAPAPPMRFP- 374
Query: 633 VGGPSPSPSPGSSSSFSGSEGEDPRPE----PDLWKPLPQERDRLPSCKPPV-------- 680
S S + SSSS S S P P P P S +PP
Sbjct: 375 YSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434
Query: 681 -------PLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVS-------- 725
P P P G +S PG P T GA + P PVS
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPST--------GAQSTAHP-PVSTHHHHHQQ 485
Query: 726 QLEKRPRVSEASRGLELGHG-----------RPRVAAKTHERLLPQGPPELPSESP---- 770
Q +++ + + + + HG P +H P L S P
Sbjct: 486 QQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPG 545
Query: 771 PPELPPPEA----------APPVLPASSLQPPCHCGK-PLQQELHSLGAALA----EKLD 815
P LPPP + PPV +S+ G P S G A +
Sbjct: 546 PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVP 605
Query: 816 RLATALAGLAQEVATMRTQ-VNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPY 874
+ T+ A L+ +AT+ + P GP P G+ + P + A PG++
Sbjct: 606 TVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRA---PSPGAYKTATPPGYK---- 658
Query: 875 WRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPL--PPDAPPAEPPGLHCSSSQ 932
P P P G R G GT + P P PPA P G
Sbjct: 659 -----PGSP-PSFRTGTPPGYR-GTSPPAGPGTFKPGSPTVGPGPLPPAGPSG------- 704
Query: 933 QLLSSTPSCHAAPPAHPLLAHT-------GGHQSPLPPLVPAALPLQGASPPAASAD 982
L S P AAP + P L+ T +++P P+ PA P SPP D
Sbjct: 705 --LPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSP----SPPPKVVD 755
Score = 50.4 bits (119), Expect = 8e-06
Identities = 98/395 (24%), Positives = 119/395 (30%), Gaps = 104/395 (26%)
Query: 637 SPSPSPGSSSSFSGSEGEDPRP--EPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSS 694
SP S S SG RP P L+ P PQ D P +P P P TP G
Sbjct: 137 SPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR-QPEASFEPHPSVTPTGYH 195
Query: 695 G-----------GSPGEDPRRTE--PRYCSGLGAGTAQDPC----------PVSQLEKRP 731
PG P + P G+ +G P P + P
Sbjct: 196 APMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPP 255
Query: 732 RVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPP-------PELPPPEAAPPVL 784
+ S G P T P G LPS PP P LPPP A P+
Sbjct: 256 PTTPISVSSSGASGAPPTKPPT----TPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLN 311
Query: 785 PASSLQPPCHCGKPLQQEL---HSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRR 841
AS+ PP +PL L H++G +G
Sbjct: 312 NASA-SPPGLGAQPLPGHLPSPHAMGQG----------------------------MGGL 342
Query: 842 PQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQ 901
P GP +GP A P LP P P S A
Sbjct: 343 PPGP------------EKGPTLA--PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAA--S 386
Query: 902 GLSRGTARRARPLP-----PDAPPAEPPGLHCSSSQQ--------LLSSTPSCHAAPPAH 948
S ++ A P P P P + PP S S Q L S PP
Sbjct: 387 SSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPP 446
Query: 949 P---LLAHTGGHQSPLPPLVPAALPLQGASPPAAS 980
P LLA++ H P PP A A PP ++
Sbjct: 447 PYGRLLANSNAHPGPFPPSTGAQ---STAHPPVST 478
Score = 43.5 bits (101), Expect = 0.001
Identities = 103/474 (21%), Positives = 141/474 (29%), Gaps = 81/474 (17%)
Query: 86 PESESRGASLDGERASPEAAAAREPCP--LRGLLSCLPDGPTSQPHLATTPTDSSCSSGP 143
P + G + G PE P P L S P P P+ +++ + ++ SS
Sbjct: 330 PSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSS 389
Query: 144 TGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISP 203
+ SP P A +P P +L PP ++ S +G P
Sbjct: 390 SSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQG-------P 442
Query: 204 GNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAV 263
P G +L HP P PS G PP V T
Sbjct: 443 PPPPPYG------RLLANSNAHPGPFP------PSTGAQ-------STAHPP--VSTHHH 481
Query: 264 SGDCPLQGLLHCLKELPEAQDRH----PSPSGV------GNRRLQENPGAWKRGSGG--- 310
Q ++ + Q H P P G G +P A G
Sbjct: 482 HHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRP 541
Query: 311 --PGYLLTPPPHPDL-----GAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTR 363
PG PPPH + G G NS + G C PS + +
Sbjct: 542 YPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCS------HPSPSQGPQ 595
Query: 364 GVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQL-PPTSCSQNPQPGDSRSQK 422
G P P P + SS+ L + A + P + S PP + P PG ++
Sbjct: 596 GAPYPF--PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTAT 653
Query: 423 PELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSST--DWDLDFGS 480
P +P P ++ G R +P P +F S T L
Sbjct: 654 P-----------PGYKPGSPPSFRTGTPPG-YRGTSPPAGPGTFKPGSPTVGPGPLPPAG 701
Query: 481 PVGNQGQHPGKGSPPGSSPLQGL--------ENCLKEIPVPVLRPAWPCSSAAD 526
P G P +P PL E E PVP R P D
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVD 755
Score = 39.7 bits (91), Expect = 0.015
Identities = 168/750 (22%), Positives = 229/750 (30%), Gaps = 157/750 (20%)
Query: 127 QPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRR 186
+PH + TPT P + +P P P + PG GG S P P
Sbjct: 184 EPHPSVTPTGYHAPMEPPTSRMFQAP-----PGAPPPHPQLYPGGTGGVLSGPPMGP--- 235
Query: 187 KSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTR 246
+ G + + + N G +HP PP + S
Sbjct: 236 ------KGGGAASSVGGPNG---------------GKQHP-------PPTTPISVS---- 263
Query: 247 ADLGPGSPPWAVKTEAVSGDC-----PLQGLLHCLKELPEAQDRHP------SPSGVGNR 295
+ G+PP T V G P H LP P SP G+G +
Sbjct: 264 SSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
Query: 296 RLQ---ENPGAWKRGSGG------PGYLLTPPPH---PDLGAGGLLSVKMENSWVQSPPG 343
L +P A +G GG G L P PH P + ++ S S
Sbjct: 324 PLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSA 383
Query: 344 PASCQPGRQPLSPSATGDTRGVPQ-PSWGPEAQAASASSSPLEALEACL-------KGIP 395
AS S S ++ +P P P + S S+ P + + L +G P
Sbjct: 384 AASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPP 443
Query: 396 PNGSSPSQLPPTSCSQNPQPGDSRSQK---PELQPHRSHSEEATREPVLPLGLQSCVRD- 451
P L ++ P P + +Q P + H H ++ ++ Q +
Sbjct: 444 PPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQH 503
Query: 452 -GPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS----PPGSSPLQGLENC 506
G S P P P SS P GS PPG + L
Sbjct: 504 HGNSGPPPPGAFPHPLEGGSSHH--------AHPYAMSPSLGSLRPYPPGPAHL------ 549
Query: 507 LKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAP---- 562
P P + ++ S A GP + N ++ + C QG AP
Sbjct: 550 ----PPPHSQVSY--SQAGPNGPPVSSSSN-SSSSTSQGSYPCSHPSPSQGPQGAPYPFP 602
Query: 563 -----TRSLHLVSPQVFTSSCVPACHQRGFKDPG-------ATRPGVWRWL-PEGSAP-- 607
T S +S + T + PA ++ PG A PG ++ P G P
Sbjct: 603 PVPTVTTSSATLSTVIATVASSPAGYKTA-SPPGPPPYGKRAPSPGAYKTATPPGYKPGS 661
Query: 608 KPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPE-PDLWKPL 666
PS RG P G P+ P P + SG P P P PL
Sbjct: 662 PPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPL 721
Query: 667 --------PQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTA 718
P E P + PVP + P P S R G +
Sbjct: 722 SATQIKQEPAEEYETP--ESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCAR 779
Query: 719 QD----PCPVSQL--------EKRPRVSEASRGLELGHGRPRVAAKTHER---------- 756
D P S+L EK R +E E R R K ER
Sbjct: 780 SDLYFVPLEGSKLAKKRADLVEKVRREAEQRAREEKEREREREREKEREREKERELERSV 839
Query: 757 -LLPQG--PPELPSESPPPELPPPEAAPPV 783
L +G P E PS P P PP E V
Sbjct: 840 KLAQEGRAPVECPSLGPVPHRPPFEPGSAV 869
Score = 32.3 bits (72), Expect = 2.4
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 902 GLSRGTARRARP--------LPPDAPPAEPPGLHCSSSQQLLSSTPSCHAAP---PAHPL 950
GLS+G AR P PPD+ P +P +S + S TP+ + AP P +
Sbjct: 150 GLSQGPARPYHPPPLFPPSPQPPDSTPRQPE----ASFEPHPSVTPTGYHAPMEPPTSRM 205
Query: 951 LAHTGGHQSPLPPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERP 999
G P P L P + PP +S P+G + P
Sbjct: 206 FQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
Score = 31.2 bits (69), Expect = 5.3
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 915 PPDAPPAEPPGLHCSSSQQLLSSTP-SCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQG 973
PP APP P L+ + +LS P A + GG Q P PP P ++ G
Sbjct: 209 PPGAPPPHPQ-LYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP-PPTTPISVSSSG 266
Query: 974 AS--PPAASADADVPTSGVAPDGIPERP 999
AS PP PT+ V +P P
Sbjct: 267 ASGAPPTKP-----PTTPVGGGNLPSAP 289
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 62.8 bits (151), Expect = 2e-09
Identities = 192/809 (23%), Positives = 243/809 (30%), Gaps = 167/809 (20%)
Query: 145 GDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPG 204
G G G P P P + GP + G+P P +S + ERG
Sbjct: 899 GRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGP-------- 950
Query: 205 NSPLQGLINCLKEILVPGPRHPETSPSF--LPPLPSLGTSRLTRADLGPGSPPWAVKTEA 262
N P QG PGP+ P P LP P + GP PP V +
Sbjct: 951 NGP-QGPTG------FPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQG 1003
Query: 263 VSGDC-PLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHP 321
+G+ P+ H P + P +G + P G PG P
Sbjct: 1004 PTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRG 1063
Query: 322 DLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASS 381
G G L +K N PPGPA R P + G P P GP A +
Sbjct: 1064 LPGPVGALGLK-GNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQ-GPPGPAGEKGA 1121
Query: 382 SPLEALEACLKGIPPNGSSPSQLP---PTSCSQNPQPGDSRSQKPELQPHRSHSEEATRE 438
+ + P G Q P P PG+ + +P + S+ E
Sbjct: 1122 PGEKGPQG------PAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGE 1175
Query: 439 PVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS----- 493
P GP+ P P G P S D + P G QG KG
Sbjct: 1176 QGPP---------GPTGPQGPIGQP----GPSGADGE---PGPRGQQGLFGQKGDEGPRG 1219
Query: 494 ---PPGSSPLQGLENCLKEI-------------PVPVLRPAWPCSSAADRGPRRAEPRNW 537
PPG LQGL E P P+ + +GP
Sbjct: 1220 FPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPG 1279
Query: 538 TADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDP-GATRPG 596
++G EA E G+G P ++G P GA P
Sbjct: 1280 AVGEKGEPGEAGEPGLPGEGGPPGPKGERG----------------EKGESGPSGAAGPP 1323
Query: 597 VWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDP 656
+ P PK SP P+ F GP P P G +G+D
Sbjct: 1324 GPKGPPGDDGPKGSP--------------GPVGFPGDPGPPGEPGPAGQDGPPGDKGDDG 1369
Query: 657 RPEPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSG--GSPGEDPRRTEPRYCSGLG 714
P P P PS P P P G P G G G+ GE P +G
Sbjct: 1370 EP-GQTGSPGPTGEPG-PSGPPGKRGPPGPAG-PEGRQGEKGAKGEAGLEGPPGKTGPIG 1426
Query: 715 AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPEL 774
P+ + G + G P P G LP SP P+
Sbjct: 1427 ----------------PQGAPGKPGPDGLRGIPG----------PVGEQGLPG-SPGPDG 1459
Query: 775 PPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQ 834
PP PP LP L K ++ L GL +
Sbjct: 1460 PPGPMGPPGLP-------------------GLKGDSGPKGEKGHPGLIGLIGPPGEQGEK 1500
Query: 835 VNRLGRRPQG-PGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGE 893
+R PQG GP G+ T P GP PG LP GP PK +G
Sbjct: 1501 GDRGLPGPQGSSGPKGEQG--ITGPSGP--IGPPGPPGLP-----GPPGPK----GAKGS 1547
Query: 894 SCRAGDLQGLSRGTARRARPLPPDAPPAE 922
S G +G A P P PP E
Sbjct: 1548 SGPTG-----PKGEAGHPGPPGPPGPPGE 1571
Score = 47.0 bits (110), Expect = 9e-05
Identities = 66/275 (24%), Positives = 87/275 (31%), Gaps = 61/275 (22%)
Query: 122 DGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPP-- 179
DGP P P D P G G P +P T GP G PP
Sbjct: 1332 DGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGK 1391
Query: 180 --THSPSRRKSHRGQERGTSEAGI-----------------SPGNSPLQGLINCLKEILV 220
P+ + +G++ EAG+ PG L+G+ + E +
Sbjct: 1392 RGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGL 1451
Query: 221 PGPRHPETSPSFL--PPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKE 278
PG P+ P + P LP L + D GP + G L GL+ E
Sbjct: 1452 PGSPGPDGPPGPMGPPGLPGL------KGDSGP---------KGEKGHPGLIGLIGPPGE 1496
Query: 279 LPEAQDRH-PSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSW 337
E DR P P G + ++G GP + PP P L
Sbjct: 1497 QGEKGDRGLPGPQGSSGPK-------GEQGITGPSGPIGPPGPPGL-------------- 1535
Query: 338 VQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGP 372
PPGP + P P G P P P
Sbjct: 1536 -PGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 1569
Score = 44.3 bits (103), Expect = 6e-04
Identities = 97/417 (23%), Positives = 132/417 (31%), Gaps = 68/417 (16%)
Query: 142 GPTGD----GVQGSPLPIKTADKPWPTRKEGPGALGGEPSPP-THSPSRRKSHRGQERGT 196
GP G G G+ PI +P P GP G P P+ R +G
Sbjct: 1084 GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLP 1143
Query: 197 SEAGI--SPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPG-- 252
AG PG +G I + G + + P P +G + AD PG
Sbjct: 1144 GPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPR 1203
Query: 253 ------------------SPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGN 294
PP V + + G +G + ++ P P G
Sbjct: 1204 GQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQM--GPPGPPGPRGPSG 1261
Query: 295 RRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPL 354
+ P G G PG + + G GL PPGP + +
Sbjct: 1262 APGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGL-------PGEGGPPGPKGERGEKGES 1314
Query: 355 SPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQ 414
PS G P P P S P+ G P + P + P Q+
Sbjct: 1315 GPSGAA---GPPGPKGPPGDDGPKGSPGPV--------GFPGDPGPPGE--PGPAGQDGP 1361
Query: 415 PGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDW 474
PGD + + +P ++ S T EP P G + GP P P G +
Sbjct: 1362 PGD---KGDDGEPGQTGSPGPTGEPG-PSGPPG--KRGPPGPAGPEGRQGEKGAKGEAGL 1415
Query: 475 DLDFG--SPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGP 529
+ G P+G QG PGK P G L+ IP PV P S D P
Sbjct: 1416 EGPPGKTGPIGPQGA-PGKPGPDG----------LRGIPGPVGEQGLPGSPGPDGPP 1461
Score = 41.2 bits (95), Expect = 0.005
Identities = 99/406 (24%), Positives = 128/406 (31%), Gaps = 77/406 (18%)
Query: 97 GERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIK 156
GE+ A EP G+L P GP L P + GPTG G P
Sbjct: 450 GEKGQKGEPAIIEP----GMLIEGPPGPEGPAGLPGPPG----TMGPTGQ--VGDP---- 495
Query: 157 TADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLK 216
++ P R PGA G P T + G + G+ +S S Q ++ +
Sbjct: 496 -GERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQAR 554
Query: 217 EILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCL 276
+ + GP P L P GP PP + + GD QG
Sbjct: 555 -LALRGP----AGPMGLTGRP------------GPVGPPGSGGLKGEPGDVGPQG----- 592
Query: 277 KELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENS 336
P P P+G RR + + G G P D G GL + E
Sbjct: 593 ---PRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTG------PKGDRGFDGLAGLPGEKG 643
Query: 337 WVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPP 396
+ PGP+ P P GD V GP L + P
Sbjct: 644 H-RGDPGPSG--PPGPPGDDGERGDDGEV-----GPRGLPGEPGPRGL---------LGP 686
Query: 397 NGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRP 456
G PP + QPG + P+ +P + LP G Q + GP
Sbjct: 687 KGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLP-GPQGAI--GPPGE 743
Query: 457 LAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQG 502
P G P D P G HPGK PPG QG
Sbjct: 744 KGPLGKP-GLPGMPGAD------GPPG----HPGKEGPPGEKGGQG 778
Score = 31.6 bits (70), Expect = 4.0
Identities = 49/184 (26%), Positives = 55/184 (29%), Gaps = 55/184 (29%)
Query: 842 PQGP----GPMGQASWMWTLPRGPRWAHG-PGHR----HLPYWRQKGPTRPKPKILRGQG 892
PQGP GP G P GP G PGH + + GP P P ++ QG
Sbjct: 953 PQGPTGFPGPKG--------PPGPPGKDGLPGHPGQRGETGFQGKTGPPGP-PGVVGPQG 1003
Query: 893 ESCRAGDLQGLSRGTARRARPLPPDAPPAE-----------------PPGLHCSSSQQLL 935
+ G + R P PP PP E P GL L
Sbjct: 1004 PTGETGPM-------GERGHPGPP-GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGL 1055
Query: 936 SSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADADVPTSGVAPDGI 995
P P L G P PP PA S P P GI
Sbjct: 1056 RGFPGDRGLPGPVGALGLKGNEGPPGPP------------GPAGSPGERGPAGAAGPIGI 1103
Query: 996 PERP 999
P RP
Sbjct: 1104 PGRP 1107
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 61.6 bits (148), Expect = 4e-09
Identities = 176/758 (23%), Positives = 234/758 (30%), Gaps = 155/758 (20%)
Query: 122 DGPTSQPHLATTPTDSSCSSGPTGD----GVQGSP-LPIKTADK--------PWPTRKEG 168
DGP P PT SG G+ GV G P P + K P ++G
Sbjct: 822 DGPEG-PKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKG 880
Query: 169 PGALGGEPSPP-THSPSRRKSHRGQE--------RGTSEAGISPGNSPLQGLINCLKEIL 219
+ G+P P P+ + RG +GTS PG +G +
Sbjct: 881 ARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVG 940
Query: 220 VPGPRHPETSPSF--LPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLK 277
PGP+ P P LP P + GP P V + +G+
Sbjct: 941 FPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--------- 991
Query: 278 ELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSW 337
P + HP P G Q PGA +G G P P G G ++
Sbjct: 992 --PIGERGHPGPPGPPGE--QGLPGA----AGKEGAKGDPGPQGISGKDGPAGLR----- 1038
Query: 338 VQSPPGPASCQPGRQPLSPSATGD-TRGVPQPSWGPEAQAASASSSPLEALEACLKGIPP 396
PG PG Q G+ +G P P P + ++ ++ P+ G+P
Sbjct: 1039 --GFPGERGL-PGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPI--------GLP- 1086
Query: 397 NGSSPSQLPPTSCSQNPQPGDSRSQKPELQ--------------PHRSHSEEATREPVLP 442
G Q PP + PG+ Q P + P S E+ + +
Sbjct: 1087 -GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1145
Query: 443 LGLQSCVRD-GPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS-------- 493
G + D G + P P G + D + G P G QG KG
Sbjct: 1146 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPG-PRGQQGMFGQKGDEGARGFPG 1204
Query: 494 PPGSSPLQGLENCLKEI----PVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEAC 549
PPG LQGL E V + P P +GP A+ G
Sbjct: 1205 PPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1264
Query: 550 ESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKD----PGATRPGVWRWLPEGS 605
E G+ P + P+ +RG K PGA P + P
Sbjct: 1265 EKGEPGEAGNPGPPGEAGVGGPK----------GERGEKGEAGPPGAAGPPGAKGPPGDD 1314
Query: 606 APKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGED--------PR 657
PK +P P+ F GP P P G +GED P
Sbjct: 1315 GPKGNP--------------GPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPG 1360
Query: 658 PEPDLWKPLP------------QERDRLPSCKPPVPLSPCPGGT-PAGSSG--GSPGEDP 702
P + P P + R K PG T P G G G PG +
Sbjct: 1361 PSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEG 1420
Query: 703 RRTEPRYC--SGLGAGTAQD--PCPVSQLEKRPRVSEASRGLELGH-------GRPRVAA 751
R P GL QD P P+ + E GH G P
Sbjct: 1421 LRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1480
Query: 752 KTHERLLP--QGPPELPSES--PPPELPPPEAAPPVLP 785
+ +R LP QG P + P P P PP LP
Sbjct: 1481 EKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLP 1518
Score = 47.0 bits (110), Expect = 9e-05
Identities = 173/708 (24%), Positives = 213/708 (30%), Gaps = 146/708 (20%)
Query: 28 PGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLHLTALVQLVKEIPEFLFGEVKGAMDSPE 87
PG G GS +G+ GDP PR V+ P G P
Sbjct: 552 PGPVGGPGSSGAKGES----GDPGPQGPRG----------VQGPP--------GPTGKPG 589
Query: 88 SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGD- 146
R + DG R P A+ GL P P + H GP GD
Sbjct: 590 KRGRPGA-DGGRGMPGEPGAKGDRGFDGL----PGLPGDKGHRGERGPQGP--PGPPGDD 642
Query: 147 ---GVQGSPLPIKTADKPWPTRKEGPGALGGEPSPP----THSPSRRKSHRGQERGTSEA 199
G G P + P GP G P P P K + G +
Sbjct: 643 GMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPP 702
Query: 200 GISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVK 259
G GN QGL PGP+ P P P G + L AD PG P
Sbjct: 703 G-QQGNPGPQGL---------PGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHP----G 748
Query: 260 TEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGV----GNRRLQENPGAWKRGSGGPGYLL 315
E SG+ G P+ +P P GV G R L+ + G K G PG+
Sbjct: 749 KEGQSGEKGALG-----PPGPQGPIGYPGPRGVKGADGVRGLKGSKGE-KGEDGFPGFKG 802
Query: 316 TPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQ 375
D G G + + E+ + P G A P + GVP P Q
Sbjct: 803 DMGLKGDRGEVGQIGPRGEDG-PEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQ 861
Query: 376 AASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEA 435
S+ G P + + + P P R Q+ P S
Sbjct: 862 GPKGST-----------GFPGFPGANGEKGARGVAGKPGP---RGQRGPTGPRGSRGARG 907
Query: 436 TREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPP 495
P G DGP P RG + F P G G PGK P
Sbjct: 908 PTGKPGPKGTSG--GDGPPGPPGERG-------PQGPQGPVGFPGPKGPPGP-PGKDGLP 957
Query: 496 GSSPLQGLENCLKEIPVP----VLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACES 551
G +G + P V+ P P G R ++GL A +
Sbjct: 958 GHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE 1017
Query: 552 ARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKD----PGAT-RPGVWRWLPEGSA 606
G PQ + PA RGF PGA PG L G
Sbjct: 1018 GAKGD------------PGPQGISGKDGPA-GLRGFPGERGLPGAQGAPG----LKGGEG 1060
Query: 607 PKPSPLHCLESALRGI--------LPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRP 658
P+ P RG LP RP GP P P G +G
Sbjct: 1061 PQGPPGPVGSPGERGSAGTAGPIGLPGRP-------GPQGPPGPAGEKGAPGEKG----- 1108
Query: 659 EPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTE 706
PQ + PV L PG PAG + GSPGED + E
Sbjct: 1109 --------PQGPAGRDGVQGPVGL---PG--PAGPA-GSPGEDGDKGE 1142
Score = 34.7 bits (78), Expect = 0.48
Identities = 69/284 (24%), Positives = 95/284 (33%), Gaps = 93/284 (32%)
Query: 140 SSGPTGD-GVQGSPLPIKTADKPWPTRKEGPGALG------------GEPSPPTHS---- 182
+ GP GD G +G+P P+ P P + GP G+P PP S
Sbjct: 1307 AKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1366
Query: 183 ----PSRR--------KSHRGQERGTSEAGI-----------------SPGNSPLQGLIN 213
P +R + +G++ EAG PG L+G+
Sbjct: 1367 PPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPG 1426
Query: 214 CLKEILVPGPRHPETSPSFL--PPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQG 271
+ E +PG + P + P LP L + D PGS + G L G
Sbjct: 1427 PVGEQGLPGAAGQDGPPGPMGPPGLPGL------KGD--PGS-------KGEKGHPGLIG 1471
Query: 272 LLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSG---GPGYLLTPPPHPDLGAGGL 328
L+ E E DR G Q +PGA +G G GP L PP P L
Sbjct: 1472 LIGPPGEQGEKGDR-------GLPGTQGSPGA--KGDGGIPGPAGPLGPPGPPGL----- 1517
Query: 329 LSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGP 372
PGP + + P+ G+P P P
Sbjct: 1518 -------------PGPQGPKGNKGSTGPAGQKGDSGLPGPPGSP 1548
Score = 32.3 bits (72), Expect = 2.4
Identities = 60/239 (25%), Positives = 73/239 (30%), Gaps = 43/239 (17%)
Query: 122 DGPTSQPHLATTPTDSSCSS--GPTG-DGVQGS------------PLPIKTADKPWPTRK 166
DGP P P D GP G DGV G P P A P P K
Sbjct: 1314 DGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1373
Query: 167 EGP-GALGGEPSPPTHSPSRRKSHRGQERGTSEAGIS-----PGNSPLQGLINCLKEILV 220
GP GA G E G T G PG L+G+ + E +
Sbjct: 1374 RGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGL 1433
Query: 221 PGPRHPETSPSFLPP--LPSLGTSRLTRADLG----------PGSP--------PWAVKT 260
PG + P + P LP L ++ + G PG P +
Sbjct: 1434 PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGS 1493
Query: 261 EAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPP 319
GD + G L P P P G + P K SG PG +P P
Sbjct: 1494 PGAKGDGGIPGPAGPLG--PPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1550
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 61.6 bits (148), Expect = 4e-09
Identities = 176/758 (23%), Positives = 234/758 (30%), Gaps = 155/758 (20%)
Query: 122 DGPTSQPHLATTPTDSSCSSGPTGD----GVQGSP-LPIKTADK--------PWPTRKEG 168
DGP P PT SG G+ GV G P P + K P ++G
Sbjct: 771 DGPEG-PKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKG 829
Query: 169 PGALGGEPSPP-THSPSRRKSHRGQE--------RGTSEAGISPGNSPLQGLINCLKEIL 219
+ G+P P P+ + RG +GTS PG +G +
Sbjct: 830 ARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVG 889
Query: 220 VPGPRHPETSPSF--LPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLK 277
PGP+ P P LP P + GP P V + +G+
Sbjct: 890 FPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--------- 940
Query: 278 ELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSW 337
P + HP P G Q PGA +G G P P G G ++
Sbjct: 941 --PIGERGHPGPPGPPGE--QGLPGA----AGKEGAKGDPGPQGISGKDGPAGLR----- 987
Query: 338 VQSPPGPASCQPGRQPLSPSATGD-TRGVPQPSWGPEAQAASASSSPLEALEACLKGIPP 396
PG PG Q G+ +G P P P + ++ ++ P+ G+P
Sbjct: 988 --GFPGERGL-PGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPI--------GLP- 1035
Query: 397 NGSSPSQLPPTSCSQNPQPGDSRSQKPELQ--------------PHRSHSEEATREPVLP 442
G Q PP + PG+ Q P + P S E+ + +
Sbjct: 1036 -GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1094
Query: 443 LGLQSCVRD-GPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS-------- 493
G + D G + P P G + D + G P G QG KG
Sbjct: 1095 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPG-PRGQQGMFGQKGDEGARGFPG 1153
Query: 494 PPGSSPLQGLENCLKEI----PVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEAC 549
PPG LQGL E V + P P +GP A+ G
Sbjct: 1154 PPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1213
Query: 550 ESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKD----PGATRPGVWRWLPEGS 605
E G+ P + P+ +RG K PGA P + P
Sbjct: 1214 EKGEPGEAGNPGPPGEAGVGGPK----------GERGEKGEAGPPGAAGPPGAKGPPGDD 1263
Query: 606 APKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGED--------PR 657
PK +P P+ F GP P P G +GED P
Sbjct: 1264 GPKGNP--------------GPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPG 1309
Query: 658 PEPDLWKPLP------------QERDRLPSCKPPVPLSPCPGGT-PAGSSG--GSPGEDP 702
P + P P + R K PG T P G G G PG +
Sbjct: 1310 PSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEG 1369
Query: 703 RRTEPRYC--SGLGAGTAQD--PCPVSQLEKRPRVSEASRGLELGH-------GRPRVAA 751
R P GL QD P P+ + E GH G P
Sbjct: 1370 LRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1429
Query: 752 KTHERLLP--QGPPELPSES--PPPELPPPEAAPPVLP 785
+ +R LP QG P + P P P PP LP
Sbjct: 1430 EKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLP 1467
Score = 47.0 bits (110), Expect = 9e-05
Identities = 173/708 (24%), Positives = 213/708 (30%), Gaps = 146/708 (20%)
Query: 28 PGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLHLTALVQLVKEIPEFLFGEVKGAMDSPE 87
PG G GS +G+ GDP PR V+ P G P
Sbjct: 501 PGPVGGPGSSGAKGES----GDPGPQGPRG----------VQGPP--------GPTGKPG 538
Query: 88 SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGD- 146
R + DG R P A+ GL P P + H GP GD
Sbjct: 539 KRGRPGA-DGGRGMPGEPGAKGDRGFDGL----PGLPGDKGHRGERGPQGP--PGPPGDD 591
Query: 147 ---GVQGSPLPIKTADKPWPTRKEGPGALGGEPSPP----THSPSRRKSHRGQERGTSEA 199
G G P + P GP G P P P K + G +
Sbjct: 592 GMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPP 651
Query: 200 GISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVK 259
G GN QGL PGP+ P P P G + L AD PG P
Sbjct: 652 G-QQGNPGPQGL---------PGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHP----G 697
Query: 260 TEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGV----GNRRLQENPGAWKRGSGGPGYLL 315
E SG+ G P+ +P P GV G R L+ + G K G PG+
Sbjct: 698 KEGQSGEKGALG-----PPGPQGPIGYPGPRGVKGADGVRGLKGSKGE-KGEDGFPGFKG 751
Query: 316 TPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQ 375
D G G + + E+ + P G A P + GVP P Q
Sbjct: 752 DMGLKGDRGEVGQIGPRGEDG-PEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQ 810
Query: 376 AASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEA 435
S+ G P + + + P P R Q+ P S
Sbjct: 811 GPKGST-----------GFPGFPGANGEKGARGVAGKPGP---RGQRGPTGPRGSRGARG 856
Query: 436 TREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPP 495
P G DGP P RG + F P G G PGK P
Sbjct: 857 PTGKPGPKGTSG--GDGPPGPPGERG-------PQGPQGPVGFPGPKGPPGP-PGKDGLP 906
Query: 496 GSSPLQGLENCLKEIPVP----VLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACES 551
G +G + P V+ P P G R ++GL A +
Sbjct: 907 GHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE 966
Query: 552 ARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKD----PGAT-RPGVWRWLPEGSA 606
G PQ + PA RGF PGA PG L G
Sbjct: 967 GAKGD------------PGPQGISGKDGPA-GLRGFPGERGLPGAQGAPG----LKGGEG 1009
Query: 607 PKPSPLHCLESALRGI--------LPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRP 658
P+ P RG LP RP GP P P G +G
Sbjct: 1010 PQGPPGPVGSPGERGSAGTAGPIGLPGRP-------GPQGPPGPAGEKGAPGEKG----- 1057
Query: 659 EPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTE 706
PQ + PV L PG PAG + GSPGED + E
Sbjct: 1058 --------PQGPAGRDGVQGPVGL---PG--PAGPA-GSPGEDGDKGE 1091
Score = 34.7 bits (78), Expect = 0.48
Identities = 69/284 (24%), Positives = 95/284 (33%), Gaps = 93/284 (32%)
Query: 140 SSGPTGD-GVQGSPLPIKTADKPWPTRKEGPGALG------------GEPSPPTHS---- 182
+ GP GD G +G+P P+ P P + GP G+P PP S
Sbjct: 1256 AKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1315
Query: 183 ----PSRR--------KSHRGQERGTSEAGI-----------------SPGNSPLQGLIN 213
P +R + +G++ EAG PG L+G+
Sbjct: 1316 PPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPG 1375
Query: 214 CLKEILVPGPRHPETSPSFL--PPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQG 271
+ E +PG + P + P LP L + D PGS + G L G
Sbjct: 1376 PVGEQGLPGAAGQDGPPGPMGPPGLPGL------KGD--PGS-------KGEKGHPGLIG 1420
Query: 272 LLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSG---GPGYLLTPPPHPDLGAGGL 328
L+ E E DR G Q +PGA +G G GP L PP P L
Sbjct: 1421 LIGPPGEQGEKGDR-------GLPGTQGSPGA--KGDGGIPGPAGPLGPPGPPGL----- 1466
Query: 329 LSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGP 372
PGP + + P+ G+P P P
Sbjct: 1467 -------------PGPQGPKGNKGSTGPAGQKGDSGLPGPPGSP 1497
Score = 32.3 bits (72), Expect = 2.4
Identities = 60/239 (25%), Positives = 73/239 (30%), Gaps = 43/239 (17%)
Query: 122 DGPTSQPHLATTPTDSSCSS--GPTG-DGVQGS------------PLPIKTADKPWPTRK 166
DGP P P D GP G DGV G P P A P P K
Sbjct: 1263 DGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1322
Query: 167 EGP-GALGGEPSPPTHSPSRRKSHRGQERGTSEAGIS-----PGNSPLQGLINCLKEILV 220
GP GA G E G T G PG L+G+ + E +
Sbjct: 1323 RGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGL 1382
Query: 221 PGPRHPETSPSFLPP--LPSLGTSRLTRADLG----------PGSP--------PWAVKT 260
PG + P + P LP L ++ + G PG P +
Sbjct: 1383 PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGS 1442
Query: 261 EAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPP 319
GD + G L P P P G + P K SG PG +P P
Sbjct: 1443 PGAKGDGGIPGPAGPLG--PPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1499
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 61.6 bits (148), Expect = 4e-09
Identities = 176/758 (23%), Positives = 234/758 (30%), Gaps = 155/758 (20%)
Query: 122 DGPTSQPHLATTPTDSSCSSGPTGD----GVQGSP-LPIKTADK--------PWPTRKEG 168
DGP P PT SG G+ GV G P P + K P ++G
Sbjct: 810 DGPEG-PKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKG 868
Query: 169 PGALGGEPSPP-THSPSRRKSHRGQE--------RGTSEAGISPGNSPLQGLINCLKEIL 219
+ G+P P P+ + RG +GTS PG +G +
Sbjct: 869 ARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVG 928
Query: 220 VPGPRHPETSPSF--LPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLK 277
PGP+ P P LP P + GP P V + +G+
Sbjct: 929 FPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--------- 979
Query: 278 ELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSW 337
P + HP P G Q PGA +G G P P G G ++
Sbjct: 980 --PIGERGHPGPPGPPGE--QGLPGA----AGKEGAKGDPGPQGISGKDGPAGLR----- 1026
Query: 338 VQSPPGPASCQPGRQPLSPSATGD-TRGVPQPSWGPEAQAASASSSPLEALEACLKGIPP 396
PG PG Q G+ +G P P P + ++ ++ P+ G+P
Sbjct: 1027 --GFPGERGL-PGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPI--------GLP- 1074
Query: 397 NGSSPSQLPPTSCSQNPQPGDSRSQKPELQ--------------PHRSHSEEATREPVLP 442
G Q PP + PG+ Q P + P S E+ + +
Sbjct: 1075 -GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1133
Query: 443 LGLQSCVRD-GPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS-------- 493
G + D G + P P G + D + G P G QG KG
Sbjct: 1134 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPG-PRGQQGMFGQKGDEGARGFPG 1192
Query: 494 PPGSSPLQGLENCLKEI----PVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEAC 549
PPG LQGL E V + P P +GP A+ G
Sbjct: 1193 PPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1252
Query: 550 ESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKD----PGATRPGVWRWLPEGS 605
E G+ P + P+ +RG K PGA P + P
Sbjct: 1253 EKGEPGEAGNPGPPGEAGVGGPK----------GERGEKGEAGPPGAAGPPGAKGPPGDD 1302
Query: 606 APKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGED--------PR 657
PK +P P+ F GP P P G +GED P
Sbjct: 1303 GPKGNP--------------GPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPG 1348
Query: 658 PEPDLWKPLP------------QERDRLPSCKPPVPLSPCPGGT-PAGSSG--GSPGEDP 702
P + P P + R K PG T P G G G PG +
Sbjct: 1349 PSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEG 1408
Query: 703 RRTEPRYC--SGLGAGTAQD--PCPVSQLEKRPRVSEASRGLELGH-------GRPRVAA 751
R P GL QD P P+ + E GH G P
Sbjct: 1409 LRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1468
Query: 752 KTHERLLP--QGPPELPSES--PPPELPPPEAAPPVLP 785
+ +R LP QG P + P P P PP LP
Sbjct: 1469 EKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLP 1506
Score = 47.0 bits (110), Expect = 9e-05
Identities = 173/708 (24%), Positives = 213/708 (30%), Gaps = 146/708 (20%)
Query: 28 PGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLHLTALVQLVKEIPEFLFGEVKGAMDSPE 87
PG G GS +G+ GDP PR V+ P G P
Sbjct: 540 PGPVGGPGSSGAKGES----GDPGPQGPRG----------VQGPP--------GPTGKPG 577
Query: 88 SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGD- 146
R + DG R P A+ GL P P + H GP GD
Sbjct: 578 KRGRPGA-DGGRGMPGEPGAKGDRGFDGL----PGLPGDKGHRGERGPQGP--PGPPGDD 630
Query: 147 ---GVQGSPLPIKTADKPWPTRKEGPGALGGEPSPP----THSPSRRKSHRGQERGTSEA 199
G G P + P GP G P P P K + G +
Sbjct: 631 GMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPP 690
Query: 200 GISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVK 259
G GN QGL PGP+ P P P G + L AD PG P
Sbjct: 691 G-QQGNPGPQGL---------PGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHP----G 736
Query: 260 TEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGV----GNRRLQENPGAWKRGSGGPGYLL 315
E SG+ G P+ +P P GV G R L+ + G K G PG+
Sbjct: 737 KEGQSGEKGALG-----PPGPQGPIGYPGPRGVKGADGVRGLKGSKGE-KGEDGFPGFKG 790
Query: 316 TPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQ 375
D G G + + E+ + P G A P + GVP P Q
Sbjct: 791 DMGLKGDRGEVGQIGPRGEDG-PEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQ 849
Query: 376 AASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEA 435
S+ G P + + + P P R Q+ P S
Sbjct: 850 GPKGST-----------GFPGFPGANGEKGARGVAGKPGP---RGQRGPTGPRGSRGARG 895
Query: 436 TREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPP 495
P G DGP P RG + F P G G PGK P
Sbjct: 896 PTGKPGPKGTSG--GDGPPGPPGERG-------PQGPQGPVGFPGPKGPPGP-PGKDGLP 945
Query: 496 GSSPLQGLENCLKEIPVP----VLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACES 551
G +G + P V+ P P G R ++GL A +
Sbjct: 946 GHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE 1005
Query: 552 ARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKD----PGAT-RPGVWRWLPEGSA 606
G PQ + PA RGF PGA PG L G
Sbjct: 1006 GAKGD------------PGPQGISGKDGPA-GLRGFPGERGLPGAQGAPG----LKGGEG 1048
Query: 607 PKPSPLHCLESALRGI--------LPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRP 658
P+ P RG LP RP GP P P G +G
Sbjct: 1049 PQGPPGPVGSPGERGSAGTAGPIGLPGRP-------GPQGPPGPAGEKGAPGEKG----- 1096
Query: 659 EPDLWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTE 706
PQ + PV L PG PAG + GSPGED + E
Sbjct: 1097 --------PQGPAGRDGVQGPVGL---PG--PAGPA-GSPGEDGDKGE 1130
Score = 34.7 bits (78), Expect = 0.48
Identities = 69/284 (24%), Positives = 95/284 (33%), Gaps = 93/284 (32%)
Query: 140 SSGPTGD-GVQGSPLPIKTADKPWPTRKEGPGALG------------GEPSPPTHS---- 182
+ GP GD G +G+P P+ P P + GP G+P PP S
Sbjct: 1295 AKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1354
Query: 183 ----PSRR--------KSHRGQERGTSEAGI-----------------SPGNSPLQGLIN 213
P +R + +G++ EAG PG L+G+
Sbjct: 1355 PPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPG 1414
Query: 214 CLKEILVPGPRHPETSPSFL--PPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQG 271
+ E +PG + P + P LP L + D PGS + G L G
Sbjct: 1415 PVGEQGLPGAAGQDGPPGPMGPPGLPGL------KGD--PGS-------KGEKGHPGLIG 1459
Query: 272 LLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSG---GPGYLLTPPPHPDLGAGGL 328
L+ E E DR G Q +PGA +G G GP L PP P L
Sbjct: 1460 LIGPPGEQGEKGDR-------GLPGTQGSPGA--KGDGGIPGPAGPLGPPGPPGL----- 1505
Query: 329 LSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGP 372
PGP + + P+ G+P P P
Sbjct: 1506 -------------PGPQGPKGNKGSTGPAGQKGDSGLPGPPGSP 1536
Score = 32.3 bits (72), Expect = 2.4
Identities = 60/239 (25%), Positives = 73/239 (30%), Gaps = 43/239 (17%)
Query: 122 DGPTSQPHLATTPTDSSCSS--GPTG-DGVQGS------------PLPIKTADKPWPTRK 166
DGP P P D GP G DGV G P P A P P K
Sbjct: 1302 DGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1361
Query: 167 EGP-GALGGEPSPPTHSPSRRKSHRGQERGTSEAGIS-----PGNSPLQGLINCLKEILV 220
GP GA G E G T G PG L+G+ + E +
Sbjct: 1362 RGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGL 1421
Query: 221 PGPRHPETSPSFLPP--LPSLGTSRLTRADLG----------PGSP--------PWAVKT 260
PG + P + P LP L ++ + G PG P +
Sbjct: 1422 PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGS 1481
Query: 261 EAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPP 319
GD + G L P P P G + P K SG PG +P P
Sbjct: 1482 PGAKGDGGIPGPAGPLG--PPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1538
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 61.6 bits (148), Expect = 4e-09
Identities = 247/1111 (22%), Positives = 350/1111 (31%), Gaps = 202/1111 (18%)
Query: 28 PGRAVGGGSHADEGQEPAGCGDPQGGQPRHSLHLTALVQLVKEI-PEFLFG-EVKGAMDS 85
P R++ G+ A EG C D P+ L + + +E P F E K +
Sbjct: 1146 PSRSLETGAAAREGGPK--CADRPSVAPKDPLQVPTNTETSEETRPSLDFPQEAKEPETA 1203
Query: 86 PESESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSS--CSSGP 143
ES SP AA A E GLL +P+ P H TP S ++ P
Sbjct: 1204 EESAPDSTEFTEALRSPPAACAGEMGASPGLL--IPEQPPPSRHDTGTPKPSGSLANTAP 1261
Query: 144 TGD-----------GVQGSPLPIKTADKPWPTRKEGP----------------------- 169
G G G+ P+ K P R+ G
Sbjct: 1262 HGSSPTPGVGSLLGGPGGTQAPVSHNSKDPPARQPGEFLAPVANPSSTACPKPSVLSSKI 1321
Query: 170 GALGGEPS----PPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRH 225
+ G +P+ P P +K + SE + P + L C E L P P
Sbjct: 1322 SSFGCDPAGFNRDPLGVPVAKKGPQPYSSPHSELFLGP-----KDLAGCFLEELHPKPSA 1376
Query: 226 PETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTE-AVSGDCPLQGLLHCLKELPEAQD 284
+ P+ L G + P SPP +TE + P +LP +
Sbjct: 1377 RDAPPASSSCLCQDGEDAGSLEPQLPRSPPGTAETEPGRAASPPTLESSSLFPDLPVDRF 1436
Query: 285 RHPSPSGVGNRRLQENPGAW-----KRGSGGPGYL----------LTPPPHPDLGAGGLL 329
P + R P A K P Y + P PDL G +L
Sbjct: 1437 DPPLYGSLSANRDSGLPFACADPPQKTVPSDPPYPSFLLLEEVSPMLPSHFPDLSGGKVL 1496
Query: 330 SVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEA 389
S ++ P + PG +PS G G ++ + LE+
Sbjct: 1497 S--------KTCPPERTVVPGA---APSLPGKGSGCSVALMSHLSEDELEIQKLVTELES 1545
Query: 390 CLKGIPPNGSSPSQLPPTSCSQNPQPG---DSRSQKPELQPHRSHSEEATREPVLPLGLQ 446
L+ +P +L + G + SQ+ Q H + + + +G
Sbjct: 1546 QLQRSKDTRGAPRELAEAESVGRVELGTGTEPPSQRRTCQATVPHEDTFSAADLTRVGES 1605
Query: 447 SCVRDGPSRPLA--------PRGT---PTSFSSSSST-----DWDLDFGSPVGNQGQH-- 488
+ R+G +A P GT P SF + DL G+P +G +
Sbjct: 1606 TAHREGAESAVATVEAVQGRPGGTWPCPASFHPGHAALLPCAQEDLVSGAPFSPRGANFH 1665
Query: 489 -----PGKGSPPGSSPLQG-----LENCLKEI---PVPVLRPAWPCSSAADRG---PRRA 532
S G +G + CL E P P L + D+ P+
Sbjct: 1666 FQPVQKAGASKTGLCQAEGDSRPPQDVCLPEPSKQPGPQLDAGSLAKCSPDQELSFPKNK 1725
Query: 533 EPRNWTADKEGLRAEACESARLG----QGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFK 588
E + ++ LR CE R G G + P R +P+ F S V F+
Sbjct: 1726 EAASSQESEDSLRLLPCEQ-RGGFLPEPGTADQPHRGAP--APEAFGSPAVHLAPDLAFQ 1782
Query: 589 DPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSF 648
GA P + P G++P + G L R G +P +SS
Sbjct: 1783 GDGA--PPLDATWPFGASPSHAAQGHSAGRAGGHLHPTAGRPGFEGNEF---APAGASSL 1837
Query: 649 SGSEGED----PRPEPD-LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGGSPG---- 699
+ G + P P P + P R + P+ PP+ PG A S G G
Sbjct: 1838 TAPRGREAWLVPVPSPACVSNTHPSRRSQDPALSPPIRQLQLPGPGVAKSKDGILGLQEL 1897
Query: 700 ----EDPRRTEPRYCSG-------LGAGTAQDPCPVSQLEKRPRVSEASRGLEL-GH-GR 746
+ P R P G + G AQ Q+ P V+ GLE GH G
Sbjct: 1898 TPAAQSPPRVNPSGLEGGTVEGGKVACGPAQGSPGGVQVTTLPAVAGHQLGLEADGHWGL 1957
Query: 747 PRVAAKTHERLLPQGPPEL--PSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELH 804
A KT QG P P A+ P ++L P
Sbjct: 1958 LGQAEKTQG----QGTANQLQPENGVSPGGTDNHASVNASPKTALTGPTE---------- 2003
Query: 805 SLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWA 864
GA L EK A++ + T P P P ++ L A
Sbjct: 2004 --GAVLLEKCKGSRAAMSLQEEAEPT-----------PSPPSPNRES-----LALALTAA 2045
Query: 865 HG-PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR------PLPPD 917
H G R P KP + G + GDL + A PLP +
Sbjct: 2046 HSRSGSEGRTPERASSPGLNKPLLATGDSPAPSVGDLAACAPSPTSAAHMPCSLGPLPRE 2105
Query: 918 APPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPP 977
P P QL +S PSC P LLA + PA PL+ A
Sbjct: 2106 DPLTSPSRAQGGLGGQLPAS-PSCRDPPGPQQLLACS-----------PAWAPLEEADGV 2153
Query: 978 AASADADVPTSGVAPDGIPERPKEPSSLLGG 1008
A+ D S VAP + P +P L G
Sbjct: 2154 QATTDTGAEDSPVAPPSLTTSPCDPKEALAG 2184
Score = 58.5 bits (140), Expect = 3e-08
Identities = 175/745 (23%), Positives = 234/745 (31%), Gaps = 175/745 (23%)
Query: 338 VQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASA-SSSPLEALEACLKGIPP 396
V S PG S QP + +P AT T+G + G +AQA + P +A + LK
Sbjct: 23 VASSPGHPS-QPPLEDNTP-ATRTTKGAREA--GGQAQAMELPEAQPRQARDGELKPPSL 78
Query: 397 NGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRP 456
G +PS P S PG S Q P R+ R LG+ S R P+
Sbjct: 79 RGQAPSSTPGKRGSPQTPPGRSPLQAPSRLAGRAEGSPPQR---YILGIASS-RTKPTLD 134
Query: 457 LAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLR 516
P + D G+ + P + P + L G C +E P
Sbjct: 135 ETPENPQLEAAQLPEVDTPQGPGTGAPLRPGLPRTEAQPAAEEL-GFHRCFQEPPSSFTS 193
Query: 517 PAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTS 576
+ SA R P P Q RG +P + Q +
Sbjct: 194 TNYTSPSATPRPPAPGPP---------------------QSRGTSPLQPGSYPEYQASGA 232
Query: 577 SCVPACHQRGFKDPGA---TRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACV 633
P + F PGA P +P+GS P SP RG+ P F +
Sbjct: 233 DSWPPAAENSF--PGANFGVPPAEPEPIPKGSRPGGSP--------RGVSFQFP--FPAL 280
Query: 634 GGPSPSPSPGSSS-----------SFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPL 682
G S P P + +F +G P P LP+ P PL
Sbjct: 281 HGASTKPFPADVAGHAFTNGPLVFAFHQPQGAWPEEAVGTGPAYP-----LPTQPAPSPL 335
Query: 683 SPCPGGTPAG-----------SSGGSPGEDPR---------------RTEPRYCSGLGAG 716
PC G P G SS G+ PR P GLG+
Sbjct: 336 -PCYQGQPGGLNRHSDLSGALSSPGAAHSAPRPFSDSLHKSLTKILPERPPSAQDGLGST 394
Query: 717 TAQDPCPVSQLEKRPRVSEASR--GLELGHGRPRVAAKTHERLLPQGPP--ELPSESPPP 772
P S L +R +A R G++ G P L GPP LP P
Sbjct: 395 RG----PPSSLPQRHFPGQAYRASGVDTSPGPP------DTELAAPGPPPARLPQLWDPT 444
Query: 773 ELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVATMR 832
P P PP P ++ + G+P + ++L +A Q + T R
Sbjct: 445 AAPYP--TPPGGPLAATRSMFFNGQP----------SPGQRLCLPQSAPLPWPQVLPTAR 492
Query: 833 TQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQG 892
+ + + P P G GP W G + GP P + QG
Sbjct: 493 PSPHGMEMLSRLPFPAG----------GPEWQGGSQGALGTAGKTPGPREKLPAVRSSQG 542
Query: 893 ESCRAGDLQGLS------------------RGTARRARPLPPDAPPAEPP---------G 925
S G++ GT P A P+E P G
Sbjct: 543 GSPALFTYNGMTDPGAQPLFFGVAQPQVSPHGTPSLPPPRVVGASPSESPLPSPATNTAG 602
Query: 926 LHCSSSQQLLSST---------------PSCHAAPPAHPLLAHTGGHQSPLP-PLVPAAL 969
CSS + SS PS PP HP TG SP P P P +L
Sbjct: 603 STCSSLSPMSSSPANPSSEESQLPGPLGPSAFFHPPTHP--QETG---SPFPSPEPPHSL 657
Query: 970 PLQGASPPAASADADVPTSGVAPDG 994
P PA + P G+ +G
Sbjct: 658 PTHYQPEPAKA--FPFPADGLGAEG 680
Score = 56.2 bits (134), Expect = 2e-07
Identities = 226/959 (23%), Positives = 311/959 (32%), Gaps = 207/959 (21%)
Query: 82 AMDSPESESRGASLDGERAS------PEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPT 135
A+ + S S ERAS P A P P G L+ PTS H+
Sbjct: 2041 ALTAAHSRSGSEGRTPERASSPGLNKPLLATGDSPAPSVGDLAACAPSPTSAAHMP---- 2096
Query: 136 DSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGE--PSPPTHSPSRRKSHRGQE 193
CS GP LP + P + G LGG+ SP P
Sbjct: 2097 ---CSLGP---------LP---REDPLTSPSRAQGGLGGQLPASPSCRDP---------- 2131
Query: 194 RGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGS 253
PG Q L+ C SP++ P + G T D G
Sbjct: 2132 ---------PGP---QQLLAC--------------SPAWAPLEEADGVQATT--DTGAED 2163
Query: 254 PPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGY 313
P A + S P + L CL + G E+P +W GS
Sbjct: 2164 SPVAPPSLTTSPCDPKEALAGCLLQ--------------GEGSPLEDPSSWPPGSVSA-- 2207
Query: 314 LLTPPPHPDLGAGGLLSV----KMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPS 369
+T D L + + E W PG A+ P +SPS G+
Sbjct: 2208 -VTCTHSGDTPKDSTLRIPEDSRKEKLW--ESPGRATSPPLAGAVSPSVAVRATGLSSTP 2264
Query: 370 WGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHR 429
G EAQA P + +G PP+ ++P ++P S +P S L HR
Sbjct: 2265 TGDEAQAGRGLPGP----DPQSRGAPPH-TNPDRMPRGHSSYSP------SNTARL-GHR 2312
Query: 430 SHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHP 489
+ T P P LQ GP P G +S+ D G+P G+
Sbjct: 2313 -EGQAVTAVPTEPPTLQGA---GPDSPACLEG-----EMGTSSKEPEDPGTP--ETGRSG 2361
Query: 490 GKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEA- 548
P + P GL P S + R P+ + L+ +
Sbjct: 2362 ATKMPRVTCPSTGLGLGRTTAPSSTASDFQSDSPQSHRNASHQTPQGDPLGPQDLKQRSR 2421
Query: 549 -----CESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPE 603
S GQ +G+AP + T A + G PG +R + P
Sbjct: 2422 GYKKKPASTENGQWKGQAPHGPV--------TCEVCAASFRSG---PGLSRHKARKHRPH 2470
Query: 604 GSAP-KPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGED-PRPEPD 661
AP +PSP +AL P+ PL C P S SG E + R +P
Sbjct: 2471 PGAPAEPSP-----AALPAQQPLEPLAQKC------QPPRKKSHRVSGKERPNHSRGDPS 2519
Query: 662 -LWKPLP----QERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAG 716
+ +P P +E R P L P P T +P PR + R
Sbjct: 2520 HVTQPPPAQGSKEVLRAPGSPHSQQLHP-PSPTEHEVDVKTPASKPRPDQAR-------- 2570
Query: 717 TAQDPCPVSQLEKR--------PRVSEASRG---LELGHGRPRVAAKTHERLLPQGPPEL 765
+D Q EKR P V S G+ R E +LP +
Sbjct: 2571 --EDELHPKQAEKREGRRWRREPTVDSPSHSEGKSNKKRGKLRGRRLREESILPVSADVI 2628
Query: 766 PSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLA 825
+ P AS P HC + A E+ RLAT G+
Sbjct: 2629 SDGR--------GSRPSPAMASYAASPSHC-----LSVEGGPEADGEQPPRLATLGPGVM 2675
Query: 826 QEVATMRTQVNRLG----RRPQG-----PGPMGQASWMWTLPRGPRWAHGPGHRHLPYWR 876
+ A + G ++P G PG M A+ + P G + A G +W
Sbjct: 2676 EGAAETDQEALCAGETGAQKPPGDRMLCPGRMDGAA-LGEQPTGQKGASARG-----FW- 2728
Query: 877 QKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPL-PPDAPPAEPPGLHCSSSQQLL 935
GP K + + S A D SR +R + + PP P G +SS
Sbjct: 2729 --GPRETKALGVCKESGSEPAED---SSRAHSRSEEGVWEENTPPLGPLGFPETSSSPAD 2783
Query: 936 SSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADADVPTSGVAPDG 994
S+T SC P +P GG Q P P A+ A P + D +V S + P G
Sbjct: 2784 STTSSCLQGLPDNP--DTQGGVQGPEGPTPDAS--GSSAKDPPSLFDDEVSFSQLFPPG 2838
Score = 48.9 bits (115), Expect = 2e-05
Identities = 223/1003 (22%), Positives = 308/1003 (30%), Gaps = 218/1003 (21%)
Query: 123 GPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTAD---------KPWPTRKEGPGALG 173
G SQP L + + G G Q + + A KP R + P +
Sbjct: 28 GHPSQPPLEDNTPATRTTKGAREAGGQAQAMELPEAQPRQARDGELKPPSLRGQAPSSTP 87
Query: 174 GEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINC-LKEILVPGPRHPETSPSF 232
G+ P +P R + R A SP + G+ + K L P +P+ +
Sbjct: 88 GKRGSP-QTPPGRSPLQAPSRLAGRAEGSPPQRYILGIASSRTKPTLDETPENPQLEAAQ 146
Query: 233 LPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEA--QDRHPSPS 290
LP + + T A L PG P +TEA L G C +E P + + SPS
Sbjct: 147 LPEVDT-PQGPGTGAPLRPGLP----RTEAQPAAEEL-GFHRCFQEPPSSFTSTNYTSPS 200
Query: 291 GVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGPASCQPG 350
TP P PGP + G
Sbjct: 201 A------------------------TPRP--------------------PAPGPPQSR-G 215
Query: 351 RQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPP-------NGSSPSQ 403
PL P + + + SW P A+ + ++ G+PP GS P
Sbjct: 216 TSPLQPGSYPEYQASGADSWPPAAENSFPGAN---------FGVPPAEPEPIPKGSRPGG 266
Query: 404 LPPTSCSQNPQPG-DSRSQKPELQPHRSHSEEATREPVL-----PLGL--QSCVRDGPSR 455
P Q P P S KP H+ T P++ P G + V GP+
Sbjct: 267 SPRGVSFQFPFPALHGASTKPFPADVAGHA--FTNGPLVFAFHQPQGAWPEEAVGTGPAY 324
Query: 456 PLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
PL + P+ L+ S + PG L L +I +P
Sbjct: 325 PLPTQPAPSPLPCYQGQPGGLNRHSDLSGALSSPGAAHSAPRPFSDSLHKSLTKI-LPER 383
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----GEAPTRSLHLVS 570
P+ + RGP + P+ + RA +++ G P R L
Sbjct: 384 PPSAQDGLGSTRGPPSSLPQRHFPG-QAYRASGVDTSPGPPDTELAAPGPPPARLPQLWD 442
Query: 571 PQVF---TSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSP--LHCLESALRGILPV 625
P T P R G PG LP+ SAP P P L + G+ +
Sbjct: 443 PTAAPYPTPPGGPLAATRSMFFNGQPSPGQRLCLPQ-SAPLPWPQVLPTARPSPHGMEML 501
Query: 626 RPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPC 685
L F GGP G S G+ G+ P P R++LP+ + SP
Sbjct: 502 SRLPFPA-GGPEWQ---GGSQGALGTAGKTPGP-----------REKLPAVRSSQGGSPA 546
Query: 686 -------------------------PGGTPAGSS----GGSPGEDPRRTEPRYCSGLGAG 716
P GTP+ G SP E P P +
Sbjct: 547 LFTYNGMTDPGAQPLFFGVAQPQVSPHGTPSLPPPRVVGASPSESPL---PSPATNTAGS 603
Query: 717 TAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQ--GPPELPSESPPPEL 774
T P+S P E+ LG +A H PQ G P PS PP L
Sbjct: 604 TCSSLSPMSSSPANPSSEESQLPGPLGP-----SAFFHPPTHPQETGSP-FPSPEPPHSL 657
Query: 775 P------PPEAAP------------------------PVLPASSLQPPCHCGKPLQQELH 804
P P +A P P + LQ P
Sbjct: 658 PTHYQPEPAKAFPFPADGLGAEGAFQCLEETPFPHEGPEVGRGGLQGFPRAPPPYPTHHF 717
Query: 805 SLGAALAEKLDRLATA------LAGLAQEVATMRTQVNRLGRRPQG----PGPMGQASWM 854
SL +A ++LD L T + LA +A + L R G PGP G S
Sbjct: 718 SLSSASLDQLDVLLTCRQCDRNYSSLAAFLAHRQFCGLLLARAKDGHQRSPGPPGLPSPP 777
Query: 855 WTLPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPL 914
PR P AH H + G + + G+ + R G L L A PL
Sbjct: 778 -AAPRVPADAHAGLLSHAKTFLLAGDAQAE-----GKDDPLRTGFLPSL----AATPFPL 827
Query: 915 PPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAA------ 968
P E S + L+ P + P P P++
Sbjct: 828 PASDLDMEDDAKLDSLITEALNGMEYQSDNPEIDSSFIDVFADEEPSGPRGPSSGHPLKS 887
Query: 969 ----LPLQGASPPAASADADVPTSGVAPDGIPERPKEPSSLLG 1007
P A PP +A D T G P R + + LG
Sbjct: 888 KAGVTPESKAPPPLPAATPDPQTPRPGDRGCPARGRPKTRSLG 930
Score = 40.8 bits (94), Expect = 0.007
Identities = 177/799 (22%), Positives = 239/799 (29%), Gaps = 177/799 (22%)
Query: 82 AMDSPESESRGA----------------SLDGERASPEAAAAREPCPLRGLLSCLPDGPT 125
AM+ PE++ R A S G+R SP+ R P L+ +G
Sbjct: 57 AMELPEAQPRQARDGELKPPSLRGQAPSSTPGKRGSPQTPPGRSPLQAPSRLAGRAEGSP 116
Query: 126 SQPHL---ATTPTDSSCSSGPTGDGVQGSPLP-IKTADKPWPTRKEGPGALGGEPSPPTH 181
Q ++ A++ T + P ++ + LP + T P PG E P
Sbjct: 117 PQRYILGIASSRTKPTLDETPENPQLEAAQLPEVDTPQGPGTGAPLRPGLPRTEAQPAAE 176
Query: 182 S----------PSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPS 231
PS S + +PG +G L PG +PE S
Sbjct: 177 ELGFHRCFQEPPSSFTSTNYTSPSATPRPPAPGPPQSRGT-----SPLQPGS-YPEYQAS 230
Query: 232 FLPPLPSLGTSRLTRADLG-PGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPS 290
P + A+ G P + P + + G P P P+
Sbjct: 231 GADSWPPAAENSFPGANFGVPPAEPEPIPKGSRPGGSPRGVSFQFPFPALHGASTKPFPA 290
Query: 291 GVGNRRLQENP---------GAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSP 341
V P GAW + G G P P
Sbjct: 291 DVAGHAFTNGPLVFAFHQPQGAWPEEAVGTGPAYPLPTQP-------------------A 331
Query: 342 PGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPN---G 398
P P C G QP + D G + S S ++L L PP+ G
Sbjct: 332 PSPLPCYQG-QPGGLNRHSDLSGALSSPGAAHSAPRPFSDSLHKSLTKILPERPPSAQDG 390
Query: 399 SSPSQLPPTSCSQNPQPGDS-RSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPL 457
++ PP+S Q PG + R+ + P +E A P P + D + P
Sbjct: 391 LGSTRGPPSSLPQRHFPGQAYRASGVDTSPGPPDTELAAPGP--PPARLPQLWDPTAAPY 448
Query: 458 -APRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSP-------PGSSPLQGLENCLKE 509
P G P + + S + G P Q + +P P + P L
Sbjct: 449 PTPPGGPLAATRSMFFN-----GQPSPGQRLCLPQSAPLPWPQVLPTARPSPHGMEMLSR 503
Query: 510 IPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLV 569
+P P P W S G TA K E + R QG
Sbjct: 504 LPFPAGGPEWQGGSQGALG---------TAGKTPGPREKLPAVRSSQGG----------- 543
Query: 570 SPQVFTSSCVPACHQRGFKDPGA-------TRPGVWRWLPEGSAPKPSPLHCLESALRGI 622
SP +FT + G DPGA +P V P G+ P P S
Sbjct: 544 SPALFTYN--------GMTDPGAQPLFFGVAQPQV---SPHGTPSLPPPRVVGASPSESP 592
Query: 623 LPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPL 682
LP A G S SP SSS + S E P P L P P
Sbjct: 593 LPSPATNTA--GSTCSSLSPMSSSPANPSSEESQLPGP-----LGPSAFFHPPTHPQETG 645
Query: 683 SPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTA-----QDPCPVSQ-------LEKR 730
SP P P S +P + P GLGA A + P P L+
Sbjct: 646 SPFPSPEPPHSLPTHYQPEPAKAFPFPADGLGAEGAFQCLEETPFPHEGPEVGRGGLQGF 705
Query: 731 PRV---------SEASRGLE---------------------LGH----GRPRVAAKTHER 756
PR S +S L+ L H G AK +
Sbjct: 706 PRAPPPYPTHHFSLSSASLDQLDVLLTCRQCDRNYSSLAAFLAHRQFCGLLLARAKDGHQ 765
Query: 757 LLPQGPPELPSESPPPELP 775
P GPP LPS P +P
Sbjct: 766 RSP-GPPGLPSPPAAPRVP 783
Score = 40.8 bits (94), Expect = 0.007
Identities = 160/696 (22%), Positives = 222/696 (31%), Gaps = 134/696 (19%)
Query: 84 DSPESESRGASL--DGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSS 141
D+PE +S + D E + P ++ P L+ P+ P A TP +
Sbjct: 856 DNPEIDSSFIDVFADEEPSGPRGPSSGHP--LKSKAGVTPESKAPPPLPAATPDPQTPRP 913
Query: 142 GPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQE-------- 193
G G +G P KT +LG P+ R+ RG++
Sbjct: 914 GDRGCPARGRP---KTR------------SLGLAPTEADAPSQGRQQRRGKQLKLFRKDL 958
Query: 194 --RGTSEAGISPGNSPLQGL----INCLKEILVPGPRHPETSP--SFLPPLPSL------ 239
G +E S G GL + L E P PR P T S P P +
Sbjct: 959 DSGGAAEGSGSGGGGRASGLRPRRNDGLGERPPPRPRRPRTQAPGSRADPAPRVPRAAAL 1018
Query: 240 --GTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKE----------LPEAQDRHP 287
T R L P P K +A G + +L +++ +D P
Sbjct: 1019 PEETRSSRRRRLPPRKDP--RKRKARGGAWGKELILKIVQQKNRLREYDFASESEEDEQP 1076
Query: 288 SPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSP-----P 342
P G G R G RG LT P D + + E +P P
Sbjct: 1077 PPRGPGFR------GRRGRGEKRKEVELTQGPREDEPQKPRKAARQEAGGDGAPANPEEP 1130
Query: 343 GPASCQPGRQPLSPSATGDTR----GVPQPSWGPEAQAASASSSPLEALEACLKGIPPNG 398
G + PGR SP A G +R G GP+ A S +P + L+ +P N
Sbjct: 1131 GGSRPGPGR---SPQARGPSRSLETGAAAREGGPKC-ADRPSVAPKDPLQ-----VPTNT 1181
Query: 399 SSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDG---PSR 455
+ + P+ PQ E P + EA R P + G P +
Sbjct: 1182 ETSEETRPS--LDFPQEAKEPETAEESAPDSTEFTEALRSPPAACAGEMGASPGLLIPEQ 1239
Query: 456 PLAPR---GTP---------TSFSSSSSTDWDLDFGSPVGNQG--QHPGKGSP---PGSS 498
P R GTP SS + G P G Q H K P PG
Sbjct: 1240 PPPSRHDTGTPKPSGSLANTAPHGSSPTPGVGSLLGGPGGTQAPVSHNSKDPPARQPGEF 1299
Query: 499 PLQGLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR 558
P P + + S D +P K+G + + + L G
Sbjct: 1300 LAPVANPSSTACPKPSVLSSKISSFGCDPAGFNRDPLGVPVAKKGPQPYSSPHSELFLGP 1359
Query: 559 GEAPTRSLHLVSPQVFTSSCVPA---CHQRGFKDPGATRPGVWRWLPEGSAPKP----SP 611
+ L + P+ PA C + +D G+ P + R P + +P SP
Sbjct: 1360 KDLAGCFLEELHPKPSARDAPPASSSCLCQDGEDAGSLEPQLPRSPPGTAETEPGRAASP 1419
Query: 612 LHCLESALRGILPV----------------RPLRFACVGGPSPS-PSPGSSSSFSGSEGE 654
S+L LPV L FAC P + PS SF E
Sbjct: 1420 PTLESSSLFPDLPVDRFDPPLYGSLSANRDSGLPFACADPPQKTVPSDPPYPSFLLLEEV 1479
Query: 655 DPRPE---PD------LWKPLPQERDRLPSCKPPVP 681
P PD L K P ER +P P +P
Sbjct: 1480 SPMLPSHFPDLSGGKVLSKTCPPERTVVPGAAPSLP 1515
Score = 39.7 bits (91), Expect = 0.015
Identities = 104/412 (25%), Positives = 143/412 (34%), Gaps = 94/412 (22%)
Query: 109 EPCPLRGLLSCL--PDGPTSQPHLATTPTDSSC-----SSGPTGDGVQGSPLPIKTADKP 161
+P P +G L P P SQ +PT+ +S P D + L K A+K
Sbjct: 2523 QPPPAQGSKEVLRAPGSPHSQQLHPPSPTEHEVDVKTPASKPRPDQAREDELHPKQAEK- 2581
Query: 162 WPTRKEGPGALGGEPS--PPTHSPSRRKSHRGQERGTS--EAGISPGNSPL--QGLINCL 215
+EG EP+ P+HS + RG+ RG E I P ++ + G +
Sbjct: 2582 ----REGR-RWRREPTVDSPSHSEGKSNKKRGKLRGRRLREESILPVSADVISDGRGSRP 2636
Query: 216 KEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEA---VSGDCPLQGL 272
+ P S + G A LGPG A +T+ +G+ Q
Sbjct: 2637 SPAMASYAASPSHCLSVEGGPEADGEQPPRLATLGPGVMEGAAETDQEALCAGETGAQ-- 2694
Query: 273 LHCLKELPEAQDRHPSPSGVGNRRLQENP----GAWKRGSGGP------GYLLTPPPHPD 322
DR P + L E P GA RG GP G P
Sbjct: 2695 -------KPPGDRMLCPGRMDGAALGEQPTGQKGASARGFWGPRETKALGVCKESGSEPA 2747
Query: 323 LGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSS 382
+ S E W ++ P PL P G P+ S P A S +SS
Sbjct: 2748 EDSSRAHSRSEEGVWEENTP----------PLGPL------GFPETSSSP---ADSTTSS 2788
Query: 383 PLEALEACLKGIP-----------PNGSSP------SQLPPT------SCSQNPQPGDSR 419
CL+G+P P G +P ++ PP+ S SQ PG
Sbjct: 2789 -------CLQGLPDNPDTQGGVQGPEGPTPDASGSSAKDPPSLFDDEVSFSQLFPPGGRL 2841
Query: 420 SQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSS 471
++K + E+ PVLPL Q +G L P PT S SSS
Sbjct: 2842 TRKRNPHVYGKRCEK----PVLPLPTQPSFEEGGDPTLGPARLPTDLSDSSS 2889
Score = 36.2 bits (82), Expect = 0.16
Identities = 142/633 (22%), Positives = 197/633 (31%), Gaps = 182/633 (28%)
Query: 411 QNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSS 470
+ P P R ++P Q S ++ A R P L R R L PR P +
Sbjct: 988 ERPPP---RPRRPRTQAPGSRADPAPRVP-RAAALPEETRSSRRRRLPPRKDPRKRKARG 1043
Query: 471 STDW----------------DLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPV 514
W + DF S Q P +G PG +G KE+ +
Sbjct: 1044 GA-WGKELILKIVQQKNRLREYDFASESEEDEQPPPRG--PGFRGRRGRGEKRKEVELT- 1099
Query: 515 LRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVF 574
+GPR EP+ ++ R EA G AP
Sbjct: 1100 ------------QGPREDEPQK---PRKAARQEA--------GGDGAPANP--------- 1127
Query: 575 TSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVG 634
++PG +RPG P S P LE+ R C
Sbjct: 1128 -------------EEPGGSRPG-----PGRSPQARGPSRSLETGAAA----REGGPKCAD 1165
Query: 635 GPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP-------CPG 687
PS +P + E+ RP D PQE + + P S P
Sbjct: 1166 RPSVAPKDPLQVPTNTETSEETRPSLDF----PQEAKEPETAEESAPDSTEFTEALRSPP 1221
Query: 688 GTPAGSSGGSPGE-DPRRTEPRYCSGLGAGTAQDPCPVSQLEKR-PRVSEASRGLELGHG 745
AG G SPG P + P S GT P P L P S + G+ G
Sbjct: 1222 AACAGEMGASPGLLIPEQPPP---SRHDTGT---PKPSGSLANTAPHGSSPTPGVGSLLG 1275
Query: 746 RPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHS 805
P Q P S+ PP P AP P+S+ C KP
Sbjct: 1276 GPGGT---------QAPVSHNSKDPPARQPGEFLAPVANPSSTA-----CPKP------- 1314
Query: 806 LGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAH 865
+ L+ K+ AG ++ P+G + +GP+
Sbjct: 1315 --SVLSSKISSFGCDPAGFNRD-------------------PLG----VPVAKKGPQ--- 1346
Query: 866 GPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPG 925
PY PK L G C +L +P DAPPA
Sbjct: 1347 -------PYSSPHSELFLGPKDLAG----CFLEEL---------HPKPSARDAPPASSSC 1386
Query: 926 LHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAA-----LPLQGASPP--- 977
L C + S P +PP A T ++ PP + ++ LP+ PP
Sbjct: 1387 L-CQDGEDAGSLEPQLPRSPPG---TAETEPGRAASPPTLESSSLFPDLPVDRFDPPLYG 1442
Query: 978 --AASADADVPTSGVAP--DGIPERPKEPSSLL 1006
+A+ D+ +P + P +P P PS LL
Sbjct: 1443 SLSANRDSGLPFACADPPQKTVPSDPPYPSFLL 1475
Score = 35.8 bits (81), Expect = 0.21
Identities = 201/859 (23%), Positives = 270/859 (31%), Gaps = 174/859 (20%)
Query: 140 SSGPTGDGVQGSPLP---IKTADKPWPTRKEGPGALG---GEPSPPTHSPSRRKSHRGQE 193
S G G++GS + + +P P G + G G P P K E
Sbjct: 3182 SLGDLPGGLEGSSAVAHLLNSITEPAPKHHRGKRSAGKAAGSPGDPWGQEGEAKKDSPGE 3241
Query: 194 RGTSEAGISPGN-----SPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRAD 248
R A +P N +P L + PGP SPS P P G L +A
Sbjct: 3242 RAKPRARSTPSNPDGAATPDSASATALADAGSPGPPRTTPSPS---PDPWAGGEPLLQAT 3298
Query: 249 LGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEA--QDRH---PSPSGV----GNRRLQE 299
P + S DC HC K P+ RH SP V R+
Sbjct: 3299 ------PVHEACKDPSRDCH-----HCGKRFPKPFKLQRHLAVHSPQRVYLCPRCPRVYP 3347
Query: 300 NPGAWKRGSGGPGYLLTPPP--HPDLGAGGLLSVKMENSWVQSPPGPASCQ---PGRQPL 354
G GG LL P H L A L + M ++ +SC ++
Sbjct: 3348 EHGELLAHLGGAHGLLERPELQHTPLYACELCATVMRI--IKKSFACSSCNYTFAKKEQF 3405
Query: 355 SPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQ 414
RG QP + A ALE L P+ +P ++ P
Sbjct: 3406 DRHMNKHLRGGRQPFAFRGVRRPGAPGQKARALEGTL----PSKRRRVAMPGSA----PG 3457
Query: 415 PGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDW 474
PG+ R P S E LP L C PS ++ W
Sbjct: 3458 PGEDR-------PPPRGSSPILSEGSLPALLHLCSEVAPS---------------TTKGW 3495
Query: 475 DLDFGSPVGNQGQHPGKGSPPGSSPLQGLE--NCLKEIPVPVLRPAWPCSSAADRGPRRA 532
PV P + P++G E + +E P P L P +P + A RG
Sbjct: 3496 PETLERPVD-----------PVTHPIRGCELPSNHQECPPPSLSP-FPAALADGRG---- 3539
Query: 533 EPRNWTADKEGLRAEACESARLGQGRGEA-PTRSLHLVSPQVFTSSCVPACHQRGFKDPG 591
+ L + EA P L+ + + +P RG G
Sbjct: 3540 --------------DCALDGALERPENEASPGSPGPLLQQALPLGASLPRPGARGQDAEG 3585
Query: 592 ATRPGVW---RWLPEGSAPKPSPLHCLES-ALRGILPVRPLRFACVGGPSPSPSPGSSSS 647
P V+ R P G+ + +P H E L+ V GGP + GS++
Sbjct: 3586 KRAPLVFSGKRRAP-GARGRCAPDHFQEDHLLQKEKEVSSSHMVSEGGPRGTFHKGSATK 3644
Query: 648 FSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLS-PCPGGTPAGSSGGSPGEDPRRTE 706
+G + +DR + P L P GS +PGE R TE
Sbjct: 3645 PAGCQSSS--------------KDRSAASTPSKALKFPVHPRKAVGSL--APGELARGTE 3688
Query: 707 PRYCSGLGAGTAQ-DPCPVSQLEKRPRVSEASRGLELGHG---RPRVAAKTHERLLPQGP 762
+G+ T + P P SQ PR G + G G +P E
Sbjct: 3689 ----NGMKPATPKAKPGPSSQGSGSPRP-----GTKTGGGSQPQPASGQLQSETATTPAK 3739
Query: 763 PELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALA 822
P PS SP PE P A S + P G+ Q SLG EK +
Sbjct: 3740 PSFPSRSPAPERLPARAQ----AKSCTKGPREAGE--QGPHGSLGP--KEKGESSTKRKK 3791
Query: 823 GLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTR 882
G A + V GR P P PR PR P R LP + K ++
Sbjct: 3792 GQVPGPARSES-VGSFGRAPSAPDKP---------PRTPRKQATPS-RVLP-TKPKPNSQ 3839
Query: 883 PKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSSTPSCH 942
KP+ + G Q R + P P PP + H
Sbjct: 3840 NKPRPPPSEQRKAEPGHTQRKD----RLGKAFPQGRPLLRPP-----------KRGTAVH 3884
Query: 943 AAPPAHPLLAHTGGHQSPL 961
A PA P T QS L
Sbjct: 3885 GAEPAEPHTHRTAEAQSDL 3903
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 57.8 bits (138), Expect = 5e-08
Identities = 184/756 (24%), Positives = 251/756 (33%), Gaps = 143/756 (18%)
Query: 97 GERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLAT----TPTDSSCSSGPTGDGVQGSP 152
G+R P A P P L+ + + PT+ LA P D P G P
Sbjct: 1807 GQRV-PSAPGQESPIPDPKLMPHMKNEPTTPSWLADIPPWVPKDRPLPPAPLSPA-PGPP 1864
Query: 153 LPIKTADKP----WPTRK---------EGPGALGGEPSPPTHSPSRRKSHRGQERGTSEA 199
P + P W T + EG L G P P R+ +E G +EA
Sbjct: 1865 TPAPESHTPAPFSWGTAEYDSVVAAVQEGAAELEGGPYSPLGKDYRKAEGEREEEGRAEA 1924
Query: 200 GISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRAD---------LG 250
+S + K P +T P P P AD LG
Sbjct: 1925 PDKSSHS--SKVPEASKSHATTEPE--QTEPEQREPTPYPDERSFQYADIYEQMMLTGLG 1980
Query: 251 PGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSP-----SGVGNRRLQENPGAWK 305
P P A +GD P CL A R+ S S + + LQ + +
Sbjct: 1981 PACPTREPPLGA-AGDWP-----PCLSTKEAAAGRNTSAEKELSSPISPKSLQSDTPTFS 2034
Query: 306 RGS-GGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSP-----PGPA------SCQPGRQP 353
+ GP T PP P+ G S+ ++P P P SC P R+
Sbjct: 2035 YAALAGP----TVPPRPEPGPSMEPSLTPPAVPPRAPILSKGPSPPLNGNILSCSPDRRS 2090
Query: 354 LSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGI--PPNGSSPSQLPPTSCSQ 411
SP +G + W S S S LE KG P + S PP
Sbjct: 2091 PSPKESGRSH------WDD-----STSDSELE------KGAREQPEKEAQSPSPP----- 2128
Query: 412 NPQPGDSRSQKPELQPHRSHSEEATREPVLP-LGLQSCVRDGPSRPLAPRGTPTSFSSSS 470
+P P S + PE + H S ++ P P L + S AP P+ S
Sbjct: 2129 HPIPMGSPTLWPETEAHVSPPLDSHLGPARPSLDFPASAFGFSSLQPAPPQLPSPAEPRS 2188
Query: 471 STDWDLDFGSPVGNQGQHPGKGSPPGS--------SPLQGLENCLKEIPVP--------- 513
+ L F G++ G P + + L++ L ++P P
Sbjct: 2189 APCGSLAFS---GDRALALAPGPPTRTRHDEYLEVTKAPSLDSSLPQLPSPSSPGAPLLS 2245
Query: 514 -VLRPAWPCSSAADRGPRRAEPRNWTADK--EGLRAEACESARLGQGRGEAPTRSLHLVS 570
+ RPA P S + A++ L A ES L G E SL ++
Sbjct: 2246 NLPRPASPALSEGSSSEATTPVISSVAERFSPSLEAAEQESGELDPGM-EPAAHSLWDLT 2304
Query: 571 PQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVR-PLR 629
P S PA P + PG G P L C E+A P + P
Sbjct: 2305 P---LSPAPPASLDLALA-PAPSLPG-----DMGDGILPCHLECSEAATEKPSPFQVPSE 2355
Query: 630 FACVGGPSPS----PSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSPC 685
GP+ + P P + + + P E W P+ +R S +P LSP
Sbjct: 2356 DCAANGPTETSPNPPGPAPAKAENEEAAACPAWERGAW---PEGAER--SSRPDTLLSPE 2410
Query: 686 PGGTPAGSSGGSP---------GEDPRRTEPRYCSG-LGAGTAQDPCPVSQLEKRPRVSE 735
PAG SGG P G TEPR G L P P S ++ R +E
Sbjct: 2411 QPVCPAGGSGGPPSSASPEVEAGPQGCATEPRPHRGELSPSFLNPPLPPS-IDDRDLSTE 2469
Query: 736 ASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPP 771
R + G GR RV GP + E+PP
Sbjct: 2470 EVRLVGRG-GRRRVGGPG----TTGGPCPVTDETPP 2500
Score = 38.1 bits (87), Expect = 0.043
Identities = 110/469 (23%), Positives = 155/469 (33%), Gaps = 90/469 (19%)
Query: 550 ESARLGQGRGEAPTRSLHLVSPQVFTSSCVP-ACHQRGFKDPGATRPGVWRWLPEGSAPK 608
E R +GR EAP +S H SS VP A +P T P E P
Sbjct: 1913 EGEREEEGRAEAPDKSSH--------SSKVPEASKSHATTEPEQTEP-------EQREPT 1957
Query: 609 PSPLHCL--------ESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEP 660
P P + L G+ P P R +G P S+ + G + E
Sbjct: 1958 PYPDERSFQYADIYEQMMLTGLGPACPTREPPLGAAGDWPP--CLSTKEAAAGRNTSAEK 2015
Query: 661 DLWKPLPQE--RDRLPSCK------PPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSG 712
+L P+ + + P+ P VP P PG P+ +P P R P G
Sbjct: 2016 ELSSPISPKSLQSDTPTFSYAALAGPTVPPRPEPG--PSMEPSLTPPAVPPRA-PILSKG 2072
Query: 713 LGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGP---PELPSES 769
+ S + P E+ GR T + L +G PE ++S
Sbjct: 2073 PSPPLNGNILSCSPDRRSPSPKES--------GRSHWDDSTSDSELEKGAREQPEKEAQS 2124
Query: 770 PPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVA 829
P P P P +P + P + H PL L LD A+A + + A
Sbjct: 2125 PSPPHPIPMGSPTLWP----ETEAHVSPPLDSHL----GPARPSLDFPASAFGFSSLQPA 2176
Query: 830 TMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGHRHLPYWRQKGPTRPKP---- 885
+ P P S ++ R A GP PTR +
Sbjct: 2177 PPQLP------SPAEPRSAPCGSLAFSGDRALALAPGP------------PTRTRHDEYL 2218
Query: 886 KILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLHCSSSQQLLSS-----TPS 940
++ + L S A LP A PA G ++ ++SS +PS
Sbjct: 2219 EVTKAPSLDSSLPQLPSPSSPGAPLLSNLPRPASPALSEGSSSEATTPVISSVAERFSPS 2278
Query: 941 CHAA-------PPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASAD 982
AA P AH+ +PL P PA+L L A P+ D
Sbjct: 2279 LEAAEQESGELDPGMEPAAHSLWDLTPLSPAPPASLDLALAPAPSLPGD 2327
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 57.4 bits (137), Expect = 7e-08
Identities = 98/380 (25%), Positives = 126/380 (33%), Gaps = 74/380 (19%)
Query: 77 GEVKGAMDSPE-SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDG-PTSQPHLATTP 134
G GAM P S G++ SP +A P P +G P G P H P
Sbjct: 21 GPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-----PGGYPQDNMHQMHKP 75
Query: 135 TDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSP-PTHSPSRRKSHRGQE 193
+S G + D P K R G +G PSP HS G E
Sbjct: 76 MESMHEKGMSDD-------PRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSE 128
Query: 194 RGTSEAGIS-----------PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS 242
+S S PG +PL G + G ++ +P L L
Sbjct: 129 HASSPVPASGPSSGPQMSSGPGGAPLDGA-----DPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 243 RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPG 302
+ L G P AV G P+ G+ + LP PS S G PG
Sbjct: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPP-----PSVSATG-------PG 231
Query: 303 AWKRGSGGPGYLLTPP----PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
GPG PP PH G GG PPGP+ PG
Sbjct: 232 PGPGPGPGPGPGPAPPNYSRPH---GMGGPN---------MPPPGPSGVPPGMP------ 273
Query: 359 TGDTRGVPQPSW--GPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC----SQN 412
G G P W GP A AA+ +S+P + + G P +P +PP + Q
Sbjct: 274 -GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRP--SPAPPAVPPAASPVMPPQT 330
Query: 413 PQPGDSRSQKPELQPHRSHS 432
PG P + H+ S
Sbjct: 331 QSPGQPAQPAPMVPLHQKQS 350
Score = 54.7 bits (130), Expect = 4e-07
Identities = 109/489 (22%), Positives = 154/489 (31%), Gaps = 128/489 (26%)
Query: 391 LKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
L G P G SP P P PG S + S + P+ G +
Sbjct: 8 LGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMM-GPSPGPPSAGHPIPTQGPGGYPQ 66
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPG---------SSPLQ 501
D + P + S ++ G + G H G G PP SPL
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGM-RSGGHAGMGPPPSPMDQHSQGYPSPLG 125
Query: 502 GLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLG-QGRGE 560
G E+ +P +S GP+ ++ G + + LG Q RG
Sbjct: 126 GSEHASSPVP----------ASGPSSGPQ------MSSGPGGAPLDGADPQALGQQNRGP 169
Query: 561 AP--TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESA 618
P LH + Q+ + G P + +G P P
Sbjct: 170 TPFNQNQLHQLRAQIMAYKMLAR---------GQPLPDHLQMAVQGKRPMP--------G 212
Query: 619 LRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKP 678
++ +P P GP P P PG P P P P P R
Sbjct: 213 MQQQMPTLPPPSVSATGPGPGPGPG------------PGPGPG---PAPPNYSRPHGMGG 257
Query: 679 PVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASR 738
P P P G P G G PG P+ P P + P + A+
Sbjct: 258 PNMPPPGPSGVPPGMPGQPPGGPPK-----------------PWP-----EGPMANAAA- 294
Query: 739 GLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP------- 791
T ++L+P P PS +PP P AA PV+P + P
Sbjct: 295 -----------PTSTPQKLIPPQPTGRPSPAPP---AVPPAASPVMPPQTQSPGQPAQPA 340
Query: 792 ---PCH--------CGKP--------LQQELHSLGAALA---EKLDRLATALAGLAQEVA 829
P H KP LQ+ + L A +A ++L+ L +LAG + A
Sbjct: 341 PMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKA 400
Query: 830 TMRTQVNRL 838
T+ + RL
Sbjct: 401 TIELKALRL 409
Score = 47.8 bits (112), Expect = 5e-05
Identities = 95/420 (22%), Positives = 138/420 (32%), Gaps = 82/420 (19%)
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
PP + +PG P + G G PS GP +A + P + IP G
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLG---PSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-- 60
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP- 459
P P + Q +P +S +K S++ + +G++S G P +P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEK-------GMSDDPRYNQMKGMGMRSGGHAGMGPPPSPM 113
Query: 460 ----RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
+G P+ S + P P S PG +PL G +
Sbjct: 114 DQHSQGYPSPLGGSEHASSPV----PASGPSSGPQMSSGPGGAPLDGADP---------- 159
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----------GEAPTR 564
+RGP P N + LRA+ L +G+ G+ P
Sbjct: 160 ----QALGQQNRGPT---PFNQNQLHQ-LRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP 211
Query: 565 SLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP 624
+ P + S AT PG G P P P G P
Sbjct: 212 GMQQQMPTLPPPSV------------SATGPGPG----PGPGPGPGP---------GPAP 246
Query: 625 VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP 684
R +GGP+ P PG S G G+ P P W P P+ P + P
Sbjct: 247 PNYSRPHGMGGPN-MPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
Query: 685 CPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL-EKRPRVS--EASRGLE 741
P G P S P P + G P P+ L +K+ R++ + RGL+
Sbjct: 306 QPTGRP---SPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD 362
Score = 47.0 bits (110), Expect = 9e-05
Identities = 96/368 (26%), Positives = 128/368 (34%), Gaps = 95/368 (25%)
Query: 602 PEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPD 661
P G P+P P S G P L GPSP PSPGS+ S G P P P
Sbjct: 7 PLGGTPRPGP-----SPGPGPSPGAML------GPSPGPSPGSAHSMMG-----PSPGP- 49
Query: 662 LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGG------SPGEDPRRTEPRY--CSGL 713
PS P+P PGG P + S E +PRY G+
Sbjct: 50 ------------PSAGHPIPTQG-PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGM 96
Query: 714 G------AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-QGPPELP 766
G AG P P+ Q + G+ P ++ +P GP P
Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQ-------------GYPSPLGGSEHASSPVPASGPSSGP 143
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAAL-AEKL--------DRL 817
S P P + A P + P Q +LH L A + A K+ D L
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFN---QNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 818 ATA------LAGLAQEVATMRT-QVNRLGRRP-----QGPGPMGQASWMWTLPRG----- 860
A + G+ Q++ T+ V+ G P GPGP G A ++ P G
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGPN 259
Query: 861 --PRWAHG--PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
P G PG +P GP +P P+ + + + + R P PP
Sbjct: 260 MPPPGPSGVPPG---MPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPP 316
Query: 917 DAPPAEPP 924
PPA P
Sbjct: 317 AVPPAASP 324
Score = 32.0 bits (71), Expect = 3.1
Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 40/163 (24%)
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR---PLPPDA----PPAEPPGLHCSSS 931
G RP P G G G S G+A P PP A P P G +
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNM 69
Query: 932 QQLLSSTPSCHA-------------------------APPAHPLLAHTGGHQSPL----- 961
Q+ S H PP P+ H+ G+ SPL
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEH 129
Query: 962 -PPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
VPA+ P G P +S P G P + ++ + P+
Sbjct: 130 ASSPVPASGPSSG--PQMSSGPGGAPLDGADPQALGQQNRGPT 170
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 57.4 bits (137), Expect = 7e-08
Identities = 98/380 (25%), Positives = 126/380 (33%), Gaps = 74/380 (19%)
Query: 77 GEVKGAMDSPE-SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDG-PTSQPHLATTP 134
G GAM P S G++ SP +A P P +G P G P H P
Sbjct: 21 GPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-----PGGYPQDNMHQMHKP 75
Query: 135 TDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSP-PTHSPSRRKSHRGQE 193
+S G + D P K R G +G PSP HS G E
Sbjct: 76 MESMHEKGMSDD-------PRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSE 128
Query: 194 RGTSEAGIS-----------PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS 242
+S S PG +PL G + G ++ +P L L
Sbjct: 129 HASSPVPASGPSSGPQMSSGPGGAPLDGA-----DPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 243 RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPG 302
+ L G P AV G P+ G+ + LP PS S G PG
Sbjct: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPP-----PSVSATG-------PG 231
Query: 303 AWKRGSGGPGYLLTPP----PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
GPG PP PH G GG PPGP+ PG
Sbjct: 232 PGPGPGPGPGPGPAPPNYSRPH---GMGGPN---------MPPPGPSGVPPGMP------ 273
Query: 359 TGDTRGVPQPSW--GPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC----SQN 412
G G P W GP A AA+ +S+P + + G P +P +PP + Q
Sbjct: 274 -GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRP--SPAPPAVPPAASPVMPPQT 330
Query: 413 PQPGDSRSQKPELQPHRSHS 432
PG P + H+ S
Sbjct: 331 QSPGQPAQPAPMVPLHQKQS 350
Score = 54.7 bits (130), Expect = 4e-07
Identities = 109/489 (22%), Positives = 154/489 (31%), Gaps = 128/489 (26%)
Query: 391 LKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
L G P G SP P P PG S + S + P+ G +
Sbjct: 8 LGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMM-GPSPGPPSAGHPIPTQGPGGYPQ 66
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPG---------SSPLQ 501
D + P + S ++ G + G H G G PP SPL
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGM-RSGGHAGMGPPPSPMDQHSQGYPSPLG 125
Query: 502 GLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLG-QGRGE 560
G E+ +P +S GP+ ++ G + + LG Q RG
Sbjct: 126 GSEHASSPVP----------ASGPSSGPQ------MSSGPGGAPLDGADPQALGQQNRGP 169
Query: 561 AP--TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESA 618
P LH + Q+ + G P + +G P P
Sbjct: 170 TPFNQNQLHQLRAQIMAYKMLAR---------GQPLPDHLQMAVQGKRPMP--------G 212
Query: 619 LRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKP 678
++ +P P GP P P PG P P P P P R
Sbjct: 213 MQQQMPTLPPPSVSATGPGPGPGPG------------PGPGPG---PAPPNYSRPHGMGG 257
Query: 679 PVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASR 738
P P P G P G G PG P+ P P + P + A+
Sbjct: 258 PNMPPPGPSGVPPGMPGQPPGGPPK-----------------PWP-----EGPMANAAA- 294
Query: 739 GLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP------- 791
T ++L+P P PS +PP P AA PV+P + P
Sbjct: 295 -----------PTSTPQKLIPPQPTGRPSPAPP---AVPPAASPVMPPQTQSPGQPAQPA 340
Query: 792 ---PCH--------CGKP--------LQQELHSLGAALA---EKLDRLATALAGLAQEVA 829
P H KP LQ+ + L A +A ++L+ L +LAG + A
Sbjct: 341 PMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKA 400
Query: 830 TMRTQVNRL 838
T+ + RL
Sbjct: 401 TIELKALRL 409
Score = 47.8 bits (112), Expect = 5e-05
Identities = 95/420 (22%), Positives = 138/420 (32%), Gaps = 82/420 (19%)
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
PP + +PG P + G G PS GP +A + P + IP G
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLG---PSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-- 60
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP- 459
P P + Q +P +S +K S++ + +G++S G P +P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEK-------GMSDDPRYNQMKGMGMRSGGHAGMGPPPSPM 113
Query: 460 ----RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
+G P+ S + P P S PG +PL G +
Sbjct: 114 DQHSQGYPSPLGGSEHASSPV----PASGPSSGPQMSSGPGGAPLDGADP---------- 159
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----------GEAPTR 564
+RGP P N + LRA+ L +G+ G+ P
Sbjct: 160 ----QALGQQNRGPT---PFNQNQLHQ-LRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP 211
Query: 565 SLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP 624
+ P + S AT PG G P P P G P
Sbjct: 212 GMQQQMPTLPPPSV------------SATGPGPG----PGPGPGPGP---------GPAP 246
Query: 625 VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP 684
R +GGP+ P PG S G G+ P P W P P+ P + P
Sbjct: 247 PNYSRPHGMGGPN-MPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
Query: 685 CPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL-EKRPRVS--EASRGLE 741
P G P S P P + G P P+ L +K+ R++ + RGL+
Sbjct: 306 QPTGRP---SPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD 362
Score = 47.0 bits (110), Expect = 9e-05
Identities = 96/368 (26%), Positives = 128/368 (34%), Gaps = 95/368 (25%)
Query: 602 PEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPD 661
P G P+P P S G P L GPSP PSPGS+ S G P P P
Sbjct: 7 PLGGTPRPGP-----SPGPGPSPGAML------GPSPGPSPGSAHSMMG-----PSPGP- 49
Query: 662 LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGG------SPGEDPRRTEPRY--CSGL 713
PS P+P PGG P + S E +PRY G+
Sbjct: 50 ------------PSAGHPIPTQG-PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGM 96
Query: 714 G------AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-QGPPELP 766
G AG P P+ Q + G+ P ++ +P GP P
Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQ-------------GYPSPLGGSEHASSPVPASGPSSGP 143
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAAL-AEKL--------DRL 817
S P P + A P + P Q +LH L A + A K+ D L
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFN---QNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 818 ATA------LAGLAQEVATMRT-QVNRLGRRP-----QGPGPMGQASWMWTLPRG----- 860
A + G+ Q++ T+ V+ G P GPGP G A ++ P G
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGPN 259
Query: 861 --PRWAHG--PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
P G PG +P GP +P P+ + + + + R P PP
Sbjct: 260 MPPPGPSGVPPG---MPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPP 316
Query: 917 DAPPAEPP 924
PPA P
Sbjct: 317 AVPPAASP 324
Score = 32.0 bits (71), Expect = 3.1
Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 40/163 (24%)
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR---PLPPDA----PPAEPPGLHCSSS 931
G RP P G G G S G+A P PP A P P G +
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNM 69
Query: 932 QQLLSSTPSCHA-------------------------APPAHPLLAHTGGHQSPL----- 961
Q+ S H PP P+ H+ G+ SPL
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEH 129
Query: 962 -PPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
VPA+ P G P +S P G P + ++ + P+
Sbjct: 130 ASSPVPASGPSSG--PQMSSGPGGAPLDGADPQALGQQNRGPT 170
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 57.4 bits (137), Expect = 7e-08
Identities = 98/380 (25%), Positives = 126/380 (33%), Gaps = 74/380 (19%)
Query: 77 GEVKGAMDSPE-SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDG-PTSQPHLATTP 134
G GAM P S G++ SP +A P P +G P G P H P
Sbjct: 21 GPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-----PGGYPQDNMHQMHKP 75
Query: 135 TDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSP-PTHSPSRRKSHRGQE 193
+S G + D P K R G +G PSP HS G E
Sbjct: 76 MESMHEKGMSDD-------PRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSE 128
Query: 194 RGTSEAGIS-----------PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS 242
+S S PG +PL G + G ++ +P L L
Sbjct: 129 HASSPVPASGPSSGPQMSSGPGGAPLDGA-----DPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 243 RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPG 302
+ L G P AV G P+ G+ + LP PS S G PG
Sbjct: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPP-----PSVSATG-------PG 231
Query: 303 AWKRGSGGPGYLLTPP----PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
GPG PP PH G GG PPGP+ PG
Sbjct: 232 PGPGPGPGPGPGPAPPNYSRPH---GMGGPN---------MPPPGPSGVPPGMP------ 273
Query: 359 TGDTRGVPQPSW--GPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC----SQN 412
G G P W GP A AA+ +S+P + + G P +P +PP + Q
Sbjct: 274 -GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRP--SPAPPAVPPAASPVMPPQT 330
Query: 413 PQPGDSRSQKPELQPHRSHS 432
PG P + H+ S
Sbjct: 331 QSPGQPAQPAPMVPLHQKQS 350
Score = 54.7 bits (130), Expect = 4e-07
Identities = 109/489 (22%), Positives = 154/489 (31%), Gaps = 128/489 (26%)
Query: 391 LKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
L G P G SP P P PG S + S + P+ G +
Sbjct: 8 LGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMM-GPSPGPPSAGHPIPTQGPGGYPQ 66
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPG---------SSPLQ 501
D + P + S ++ G + G H G G PP SPL
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGM-RSGGHAGMGPPPSPMDQHSQGYPSPLG 125
Query: 502 GLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLG-QGRGE 560
G E+ +P +S GP+ ++ G + + LG Q RG
Sbjct: 126 GSEHASSPVP----------ASGPSSGPQ------MSSGPGGAPLDGADPQALGQQNRGP 169
Query: 561 AP--TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESA 618
P LH + Q+ + G P + +G P P
Sbjct: 170 TPFNQNQLHQLRAQIMAYKMLAR---------GQPLPDHLQMAVQGKRPMP--------G 212
Query: 619 LRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKP 678
++ +P P GP P P PG P P P P P R
Sbjct: 213 MQQQMPTLPPPSVSATGPGPGPGPG------------PGPGPG---PAPPNYSRPHGMGG 257
Query: 679 PVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASR 738
P P P G P G G PG P+ P P + P + A+
Sbjct: 258 PNMPPPGPSGVPPGMPGQPPGGPPK-----------------PWP-----EGPMANAAA- 294
Query: 739 GLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP------- 791
T ++L+P P PS +PP P AA PV+P + P
Sbjct: 295 -----------PTSTPQKLIPPQPTGRPSPAPP---AVPPAASPVMPPQTQSPGQPAQPA 340
Query: 792 ---PCH--------CGKP--------LQQELHSLGAALA---EKLDRLATALAGLAQEVA 829
P H KP LQ+ + L A +A ++L+ L +LAG + A
Sbjct: 341 PMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKA 400
Query: 830 TMRTQVNRL 838
T+ + RL
Sbjct: 401 TIELKALRL 409
Score = 47.8 bits (112), Expect = 5e-05
Identities = 95/420 (22%), Positives = 138/420 (32%), Gaps = 82/420 (19%)
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
PP + +PG P + G G PS GP +A + P + IP G
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLG---PSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-- 60
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP- 459
P P + Q +P +S +K S++ + +G++S G P +P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEK-------GMSDDPRYNQMKGMGMRSGGHAGMGPPPSPM 113
Query: 460 ----RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
+G P+ S + P P S PG +PL G +
Sbjct: 114 DQHSQGYPSPLGGSEHASSPV----PASGPSSGPQMSSGPGGAPLDGADP---------- 159
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----------GEAPTR 564
+RGP P N + LRA+ L +G+ G+ P
Sbjct: 160 ----QALGQQNRGPT---PFNQNQLHQ-LRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP 211
Query: 565 SLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP 624
+ P + S AT PG G P P P G P
Sbjct: 212 GMQQQMPTLPPPSV------------SATGPGPG----PGPGPGPGP---------GPAP 246
Query: 625 VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP 684
R +GGP+ P PG S G G+ P P W P P+ P + P
Sbjct: 247 PNYSRPHGMGGPN-MPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
Query: 685 CPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL-EKRPRVS--EASRGLE 741
P G P S P P + G P P+ L +K+ R++ + RGL+
Sbjct: 306 QPTGRP---SPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD 362
Score = 47.0 bits (110), Expect = 9e-05
Identities = 96/368 (26%), Positives = 128/368 (34%), Gaps = 95/368 (25%)
Query: 602 PEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPD 661
P G P+P P S G P L GPSP PSPGS+ S G P P P
Sbjct: 7 PLGGTPRPGP-----SPGPGPSPGAML------GPSPGPSPGSAHSMMG-----PSPGP- 49
Query: 662 LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGG------SPGEDPRRTEPRY--CSGL 713
PS P+P PGG P + S E +PRY G+
Sbjct: 50 ------------PSAGHPIPTQG-PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGM 96
Query: 714 G------AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-QGPPELP 766
G AG P P+ Q + G+ P ++ +P GP P
Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQ-------------GYPSPLGGSEHASSPVPASGPSSGP 143
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAAL-AEKL--------DRL 817
S P P + A P + P Q +LH L A + A K+ D L
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFN---QNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 818 ATA------LAGLAQEVATMRT-QVNRLGRRP-----QGPGPMGQASWMWTLPRG----- 860
A + G+ Q++ T+ V+ G P GPGP G A ++ P G
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGPN 259
Query: 861 --PRWAHG--PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
P G PG +P GP +P P+ + + + + R P PP
Sbjct: 260 MPPPGPSGVPPG---MPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPP 316
Query: 917 DAPPAEPP 924
PPA P
Sbjct: 317 AVPPAASP 324
Score = 32.0 bits (71), Expect = 3.1
Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 40/163 (24%)
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR---PLPPDA----PPAEPPGLHCSSS 931
G RP P G G G S G+A P PP A P P G +
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNM 69
Query: 932 QQLLSSTPSCHA-------------------------APPAHPLLAHTGGHQSPL----- 961
Q+ S H PP P+ H+ G+ SPL
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEH 129
Query: 962 -PPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
VPA+ P G P +S P G P + ++ + P+
Sbjct: 130 ASSPVPASGPSSG--PQMSSGPGGAPLDGADPQALGQQNRGPT 170
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 57.4 bits (137), Expect = 7e-08
Identities = 98/380 (25%), Positives = 126/380 (33%), Gaps = 74/380 (19%)
Query: 77 GEVKGAMDSPE-SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDG-PTSQPHLATTP 134
G GAM P S G++ SP +A P P +G P G P H P
Sbjct: 21 GPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-----PGGYPQDNMHQMHKP 75
Query: 135 TDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSP-PTHSPSRRKSHRGQE 193
+S G + D P K R G +G PSP HS G E
Sbjct: 76 MESMHEKGMSDD-------PRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSE 128
Query: 194 RGTSEAGIS-----------PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS 242
+S S PG +PL G + G ++ +P L L
Sbjct: 129 HASSPVPASGPSSGPQMSSGPGGAPLDGA-----DPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 243 RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPG 302
+ L G P AV G P+ G+ + LP PS S G PG
Sbjct: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPP-----PSVSATG-------PG 231
Query: 303 AWKRGSGGPGYLLTPP----PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
GPG PP PH G GG PPGP+ PG
Sbjct: 232 PGPGPGPGPGPGPAPPNYSRPH---GMGGPN---------MPPPGPSGVPPGMP------ 273
Query: 359 TGDTRGVPQPSW--GPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC----SQN 412
G G P W GP A AA+ +S+P + + G P +P +PP + Q
Sbjct: 274 -GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRP--SPAPPAVPPAASPVMPPQT 330
Query: 413 PQPGDSRSQKPELQPHRSHS 432
PG P + H+ S
Sbjct: 331 QSPGQPAQPAPMVPLHQKQS 350
Score = 54.7 bits (130), Expect = 4e-07
Identities = 109/489 (22%), Positives = 154/489 (31%), Gaps = 128/489 (26%)
Query: 391 LKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
L G P G SP P P PG S + S + P+ G +
Sbjct: 8 LGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMM-GPSPGPPSAGHPIPTQGPGGYPQ 66
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPG---------SSPLQ 501
D + P + S ++ G + G H G G PP SPL
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGM-RSGGHAGMGPPPSPMDQHSQGYPSPLG 125
Query: 502 GLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLG-QGRGE 560
G E+ +P +S GP+ ++ G + + LG Q RG
Sbjct: 126 GSEHASSPVP----------ASGPSSGPQ------MSSGPGGAPLDGADPQALGQQNRGP 169
Query: 561 AP--TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESA 618
P LH + Q+ + G P + +G P P
Sbjct: 170 TPFNQNQLHQLRAQIMAYKMLAR---------GQPLPDHLQMAVQGKRPMP--------G 212
Query: 619 LRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKP 678
++ +P P GP P P PG P P P P P R
Sbjct: 213 MQQQMPTLPPPSVSATGPGPGPGPG------------PGPGPG---PAPPNYSRPHGMGG 257
Query: 679 PVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASR 738
P P P G P G G PG P+ P P + P + A+
Sbjct: 258 PNMPPPGPSGVPPGMPGQPPGGPPK-----------------PWP-----EGPMANAAA- 294
Query: 739 GLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP------- 791
T ++L+P P PS +PP P AA PV+P + P
Sbjct: 295 -----------PTSTPQKLIPPQPTGRPSPAPP---AVPPAASPVMPPQTQSPGQPAQPA 340
Query: 792 ---PCH--------CGKP--------LQQELHSLGAALA---EKLDRLATALAGLAQEVA 829
P H KP LQ+ + L A +A ++L+ L +LAG + A
Sbjct: 341 PMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKA 400
Query: 830 TMRTQVNRL 838
T+ + RL
Sbjct: 401 TIELKALRL 409
Score = 47.8 bits (112), Expect = 5e-05
Identities = 95/420 (22%), Positives = 138/420 (32%), Gaps = 82/420 (19%)
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
PP + +PG P + G G PS GP +A + P + IP G
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLG---PSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-- 60
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP- 459
P P + Q +P +S +K S++ + +G++S G P +P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEK-------GMSDDPRYNQMKGMGMRSGGHAGMGPPPSPM 113
Query: 460 ----RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
+G P+ S + P P S PG +PL G +
Sbjct: 114 DQHSQGYPSPLGGSEHASSPV----PASGPSSGPQMSSGPGGAPLDGADP---------- 159
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----------GEAPTR 564
+RGP P N + LRA+ L +G+ G+ P
Sbjct: 160 ----QALGQQNRGPT---PFNQNQLHQ-LRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP 211
Query: 565 SLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP 624
+ P + S AT PG G P P P G P
Sbjct: 212 GMQQQMPTLPPPSV------------SATGPGPG----PGPGPGPGP---------GPAP 246
Query: 625 VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP 684
R +GGP+ P PG S G G+ P P W P P+ P + P
Sbjct: 247 PNYSRPHGMGGPN-MPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
Query: 685 CPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL-EKRPRVS--EASRGLE 741
P G P S P P + G P P+ L +K+ R++ + RGL+
Sbjct: 306 QPTGRP---SPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD 362
Score = 47.0 bits (110), Expect = 9e-05
Identities = 96/368 (26%), Positives = 128/368 (34%), Gaps = 95/368 (25%)
Query: 602 PEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPD 661
P G P+P P S G P L GPSP PSPGS+ S G P P P
Sbjct: 7 PLGGTPRPGP-----SPGPGPSPGAML------GPSPGPSPGSAHSMMG-----PSPGP- 49
Query: 662 LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGG------SPGEDPRRTEPRY--CSGL 713
PS P+P PGG P + S E +PRY G+
Sbjct: 50 ------------PSAGHPIPTQG-PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGM 96
Query: 714 G------AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-QGPPELP 766
G AG P P+ Q + G+ P ++ +P GP P
Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQ-------------GYPSPLGGSEHASSPVPASGPSSGP 143
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAAL-AEKL--------DRL 817
S P P + A P + P Q +LH L A + A K+ D L
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFN---QNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 818 ATA------LAGLAQEVATMRT-QVNRLGRRP-----QGPGPMGQASWMWTLPRG----- 860
A + G+ Q++ T+ V+ G P GPGP G A ++ P G
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGPN 259
Query: 861 --PRWAHG--PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
P G PG +P GP +P P+ + + + + R P PP
Sbjct: 260 MPPPGPSGVPPG---MPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPP 316
Query: 917 DAPPAEPP 924
PPA P
Sbjct: 317 AVPPAASP 324
Score = 32.0 bits (71), Expect = 3.1
Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 40/163 (24%)
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR---PLPPDA----PPAEPPGLHCSSS 931
G RP P G G G S G+A P PP A P P G +
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNM 69
Query: 932 QQLLSSTPSCHA-------------------------APPAHPLLAHTGGHQSPL----- 961
Q+ S H PP P+ H+ G+ SPL
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEH 129
Query: 962 -PPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
VPA+ P G P +S P G P + ++ + P+
Sbjct: 130 ASSPVPASGPSSG--PQMSSGPGGAPLDGADPQALGQQNRGPT 170
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 57.4 bits (137), Expect = 7e-08
Identities = 98/380 (25%), Positives = 126/380 (33%), Gaps = 74/380 (19%)
Query: 77 GEVKGAMDSPE-SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDG-PTSQPHLATTP 134
G GAM P S G++ SP +A P P +G P G P H P
Sbjct: 21 GPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-----PGGYPQDNMHQMHKP 75
Query: 135 TDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSP-PTHSPSRRKSHRGQE 193
+S G + D P K R G +G PSP HS G E
Sbjct: 76 MESMHEKGMSDD-------PRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSE 128
Query: 194 RGTSEAGIS-----------PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS 242
+S S PG +PL G + G ++ +P L L
Sbjct: 129 HASSPVPASGPSSGPQMSSGPGGAPLDGA-----DPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 243 RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPG 302
+ L G P AV G P+ G+ + LP PS S G PG
Sbjct: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPP-----PSVSATG-------PG 231
Query: 303 AWKRGSGGPGYLLTPP----PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
GPG PP PH G GG PPGP+ PG
Sbjct: 232 PGPGPGPGPGPGPAPPNYSRPH---GMGGPN---------MPPPGPSGVPPGMP------ 273
Query: 359 TGDTRGVPQPSW--GPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC----SQN 412
G G P W GP A AA+ +S+P + + G P +P +PP + Q
Sbjct: 274 -GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRP--SPAPPAVPPAASPVMPPQT 330
Query: 413 PQPGDSRSQKPELQPHRSHS 432
PG P + H+ S
Sbjct: 331 QSPGQPAQPAPMVPLHQKQS 350
Score = 54.7 bits (130), Expect = 4e-07
Identities = 109/489 (22%), Positives = 154/489 (31%), Gaps = 128/489 (26%)
Query: 391 LKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
L G P G SP P P PG S + S + P+ G +
Sbjct: 8 LGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMM-GPSPGPPSAGHPIPTQGPGGYPQ 66
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPG---------SSPLQ 501
D + P + S ++ G + G H G G PP SPL
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGM-RSGGHAGMGPPPSPMDQHSQGYPSPLG 125
Query: 502 GLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLG-QGRGE 560
G E+ +P +S GP+ ++ G + + LG Q RG
Sbjct: 126 GSEHASSPVP----------ASGPSSGPQ------MSSGPGGAPLDGADPQALGQQNRGP 169
Query: 561 AP--TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESA 618
P LH + Q+ + G P + +G P P
Sbjct: 170 TPFNQNQLHQLRAQIMAYKMLAR---------GQPLPDHLQMAVQGKRPMP--------G 212
Query: 619 LRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKP 678
++ +P P GP P P PG P P P P P R
Sbjct: 213 MQQQMPTLPPPSVSATGPGPGPGPG------------PGPGPG---PAPPNYSRPHGMGG 257
Query: 679 PVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASR 738
P P P G P G G PG P+ P P + P + A+
Sbjct: 258 PNMPPPGPSGVPPGMPGQPPGGPPK-----------------PWP-----EGPMANAAA- 294
Query: 739 GLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP------- 791
T ++L+P P PS +PP P AA PV+P + P
Sbjct: 295 -----------PTSTPQKLIPPQPTGRPSPAPP---AVPPAASPVMPPQTQSPGQPAQPA 340
Query: 792 ---PCH--------CGKP--------LQQELHSLGAALA---EKLDRLATALAGLAQEVA 829
P H KP LQ+ + L A +A ++L+ L +LAG + A
Sbjct: 341 PMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKA 400
Query: 830 TMRTQVNRL 838
T+ + RL
Sbjct: 401 TIELKALRL 409
Score = 47.8 bits (112), Expect = 5e-05
Identities = 95/420 (22%), Positives = 138/420 (32%), Gaps = 82/420 (19%)
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
PP + +PG P + G G PS GP +A + P + IP G
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLG---PSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-- 60
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP- 459
P P + Q +P +S +K S++ + +G++S G P +P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEK-------GMSDDPRYNQMKGMGMRSGGHAGMGPPPSPM 113
Query: 460 ----RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
+G P+ S + P P S PG +PL G +
Sbjct: 114 DQHSQGYPSPLGGSEHASSPV----PASGPSSGPQMSSGPGGAPLDGADP---------- 159
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----------GEAPTR 564
+RGP P N + LRA+ L +G+ G+ P
Sbjct: 160 ----QALGQQNRGPT---PFNQNQLHQ-LRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP 211
Query: 565 SLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP 624
+ P + S AT PG G P P P G P
Sbjct: 212 GMQQQMPTLPPPSV------------SATGPGPG----PGPGPGPGP---------GPAP 246
Query: 625 VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP 684
R +GGP+ P PG S G G+ P P W P P+ P + P
Sbjct: 247 PNYSRPHGMGGPN-MPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
Query: 685 CPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL-EKRPRVS--EASRGLE 741
P G P S P P + G P P+ L +K+ R++ + RGL+
Sbjct: 306 QPTGRP---SPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD 362
Score = 47.0 bits (110), Expect = 9e-05
Identities = 96/368 (26%), Positives = 128/368 (34%), Gaps = 95/368 (25%)
Query: 602 PEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPD 661
P G P+P P S G P L GPSP PSPGS+ S G P P P
Sbjct: 7 PLGGTPRPGP-----SPGPGPSPGAML------GPSPGPSPGSAHSMMG-----PSPGP- 49
Query: 662 LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGG------SPGEDPRRTEPRY--CSGL 713
PS P+P PGG P + S E +PRY G+
Sbjct: 50 ------------PSAGHPIPTQG-PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGM 96
Query: 714 G------AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-QGPPELP 766
G AG P P+ Q + G+ P ++ +P GP P
Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQ-------------GYPSPLGGSEHASSPVPASGPSSGP 143
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAAL-AEKL--------DRL 817
S P P + A P + P Q +LH L A + A K+ D L
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFN---QNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 818 ATA------LAGLAQEVATMRT-QVNRLGRRP-----QGPGPMGQASWMWTLPRG----- 860
A + G+ Q++ T+ V+ G P GPGP G A ++ P G
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGPN 259
Query: 861 --PRWAHG--PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
P G PG +P GP +P P+ + + + + R P PP
Sbjct: 260 MPPPGPSGVPPG---MPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPP 316
Query: 917 DAPPAEPP 924
PPA P
Sbjct: 317 AVPPAASP 324
Score = 32.0 bits (71), Expect = 3.1
Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 40/163 (24%)
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR---PLPPDA----PPAEPPGLHCSSS 931
G RP P G G G S G+A P PP A P P G +
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNM 69
Query: 932 QQLLSSTPSCHA-------------------------APPAHPLLAHTGGHQSPL----- 961
Q+ S H PP P+ H+ G+ SPL
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEH 129
Query: 962 -PPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
VPA+ P G P +S P G P + ++ + P+
Sbjct: 130 ASSPVPASGPSSG--PQMSSGPGGAPLDGADPQALGQQNRGPT 170
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 57.4 bits (137), Expect = 7e-08
Identities = 98/380 (25%), Positives = 126/380 (33%), Gaps = 74/380 (19%)
Query: 77 GEVKGAMDSPE-SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDG-PTSQPHLATTP 134
G GAM P S G++ SP +A P P +G P G P H P
Sbjct: 21 GPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-----PGGYPQDNMHQMHKP 75
Query: 135 TDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSP-PTHSPSRRKSHRGQE 193
+S G + D P K R G +G PSP HS G E
Sbjct: 76 MESMHEKGMSDD-------PRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSE 128
Query: 194 RGTSEAGIS-----------PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS 242
+S S PG +PL G + G ++ +P L L
Sbjct: 129 HASSPVPASGPSSGPQMSSGPGGAPLDGA-----DPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 243 RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPG 302
+ L G P AV G P+ G+ + LP PS S G PG
Sbjct: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPP-----PSVSATG-------PG 231
Query: 303 AWKRGSGGPGYLLTPP----PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
GPG PP PH G GG PPGP+ PG
Sbjct: 232 PGPGPGPGPGPGPAPPNYSRPH---GMGGPN---------MPPPGPSGVPPGMP------ 273
Query: 359 TGDTRGVPQPSW--GPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC----SQN 412
G G P W GP A AA+ +S+P + + G P +P +PP + Q
Sbjct: 274 -GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRP--SPAPPAVPPAASPVMPPQT 330
Query: 413 PQPGDSRSQKPELQPHRSHS 432
PG P + H+ S
Sbjct: 331 QSPGQPAQPAPMVPLHQKQS 350
Score = 54.7 bits (130), Expect = 4e-07
Identities = 109/489 (22%), Positives = 154/489 (31%), Gaps = 128/489 (26%)
Query: 391 LKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
L G P G SP P P PG S + S + P+ G +
Sbjct: 8 LGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMM-GPSPGPPSAGHPIPTQGPGGYPQ 66
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPG---------SSPLQ 501
D + P + S ++ G + G H G G PP SPL
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGM-RSGGHAGMGPPPSPMDQHSQGYPSPLG 125
Query: 502 GLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLG-QGRGE 560
G E+ +P +S GP+ ++ G + + LG Q RG
Sbjct: 126 GSEHASSPVP----------ASGPSSGPQ------MSSGPGGAPLDGADPQALGQQNRGP 169
Query: 561 AP--TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESA 618
P LH + Q+ + G P + +G P P
Sbjct: 170 TPFNQNQLHQLRAQIMAYKMLAR---------GQPLPDHLQMAVQGKRPMP--------G 212
Query: 619 LRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKP 678
++ +P P GP P P PG P P P P P R
Sbjct: 213 MQQQMPTLPPPSVSATGPGPGPGPG------------PGPGPG---PAPPNYSRPHGMGG 257
Query: 679 PVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASR 738
P P P G P G G PG P+ P P + P + A+
Sbjct: 258 PNMPPPGPSGVPPGMPGQPPGGPPK-----------------PWP-----EGPMANAAA- 294
Query: 739 GLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP------- 791
T ++L+P P PS +PP P AA PV+P + P
Sbjct: 295 -----------PTSTPQKLIPPQPTGRPSPAPP---AVPPAASPVMPPQTQSPGQPAQPA 340
Query: 792 ---PCH--------CGKP--------LQQELHSLGAALA---EKLDRLATALAGLAQEVA 829
P H KP LQ+ + L A +A ++L+ L +LAG + A
Sbjct: 341 PMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKA 400
Query: 830 TMRTQVNRL 838
T+ + RL
Sbjct: 401 TIELKALRL 409
Score = 47.8 bits (112), Expect = 5e-05
Identities = 95/420 (22%), Positives = 138/420 (32%), Gaps = 82/420 (19%)
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
PP + +PG P + G G PS GP +A + P + IP G
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLG---PSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-- 60
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP- 459
P P + Q +P +S +K S++ + +G++S G P +P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEK-------GMSDDPRYNQMKGMGMRSGGHAGMGPPPSPM 113
Query: 460 ----RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
+G P+ S + P P S PG +PL G +
Sbjct: 114 DQHSQGYPSPLGGSEHASSPV----PASGPSSGPQMSSGPGGAPLDGADP---------- 159
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----------GEAPTR 564
+RGP P N + LRA+ L +G+ G+ P
Sbjct: 160 ----QALGQQNRGPT---PFNQNQLHQ-LRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP 211
Query: 565 SLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP 624
+ P + S AT PG G P P P G P
Sbjct: 212 GMQQQMPTLPPPSV------------SATGPGPG----PGPGPGPGP---------GPAP 246
Query: 625 VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP 684
R +GGP+ P PG S G G+ P P W P P+ P + P
Sbjct: 247 PNYSRPHGMGGPN-MPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
Query: 685 CPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL-EKRPRVS--EASRGLE 741
P G P S P P + G P P+ L +K+ R++ + RGL+
Sbjct: 306 QPTGRP---SPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD 362
Score = 47.0 bits (110), Expect = 9e-05
Identities = 96/368 (26%), Positives = 128/368 (34%), Gaps = 95/368 (25%)
Query: 602 PEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPD 661
P G P+P P S G P L GPSP PSPGS+ S G P P P
Sbjct: 7 PLGGTPRPGP-----SPGPGPSPGAML------GPSPGPSPGSAHSMMG-----PSPGP- 49
Query: 662 LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGG------SPGEDPRRTEPRY--CSGL 713
PS P+P PGG P + S E +PRY G+
Sbjct: 50 ------------PSAGHPIPTQG-PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGM 96
Query: 714 G------AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-QGPPELP 766
G AG P P+ Q + G+ P ++ +P GP P
Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQ-------------GYPSPLGGSEHASSPVPASGPSSGP 143
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAAL-AEKL--------DRL 817
S P P + A P + P Q +LH L A + A K+ D L
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFN---QNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 818 ATA------LAGLAQEVATMRT-QVNRLGRRP-----QGPGPMGQASWMWTLPRG----- 860
A + G+ Q++ T+ V+ G P GPGP G A ++ P G
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGPN 259
Query: 861 --PRWAHG--PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
P G PG +P GP +P P+ + + + + R P PP
Sbjct: 260 MPPPGPSGVPPG---MPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPP 316
Query: 917 DAPPAEPP 924
PPA P
Sbjct: 317 AVPPAASP 324
Score = 32.0 bits (71), Expect = 3.1
Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 40/163 (24%)
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR---PLPPDA----PPAEPPGLHCSSS 931
G RP P G G G S G+A P PP A P P G +
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNM 69
Query: 932 QQLLSSTPSCHA-------------------------APPAHPLLAHTGGHQSPL----- 961
Q+ S H PP P+ H+ G+ SPL
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEH 129
Query: 962 -PPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
VPA+ P G P +S P G P + ++ + P+
Sbjct: 130 ASSPVPASGPSSG--PQMSSGPGGAPLDGADPQALGQQNRGPT 170
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 57.4 bits (137), Expect = 7e-08
Identities = 98/380 (25%), Positives = 126/380 (33%), Gaps = 74/380 (19%)
Query: 77 GEVKGAMDSPE-SESRGASLDGERASPEAAAAREPCPLRGLLSCLPDG-PTSQPHLATTP 134
G GAM P S G++ SP +A P P +G P G P H P
Sbjct: 21 GPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-----PGGYPQDNMHQMHKP 75
Query: 135 TDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSP-PTHSPSRRKSHRGQE 193
+S G + D P K R G +G PSP HS G E
Sbjct: 76 MESMHEKGMSDD-------PRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSE 128
Query: 194 RGTSEAGIS-----------PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTS 242
+S S PG +PL G + G ++ +P L L
Sbjct: 129 HASSPVPASGPSSGPQMSSGPGGAPLDGA-----DPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 243 RLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPG 302
+ L G P AV G P+ G+ + LP PS S G PG
Sbjct: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPP-----PSVSATG-------PG 231
Query: 303 AWKRGSGGPGYLLTPP----PHPDLGAGGLLSVKMENSWVQSPPGPASCQPGRQPLSPSA 358
GPG PP PH G GG PPGP+ PG
Sbjct: 232 PGPGPGPGPGPGPAPPNYSRPH---GMGGPN---------MPPPGPSGVPPGMP------ 273
Query: 359 TGDTRGVPQPSW--GPEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSC----SQN 412
G G P W GP A AA+ +S+P + + G P +P +PP + Q
Sbjct: 274 -GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRP--SPAPPAVPPAASPVMPPQT 330
Query: 413 PQPGDSRSQKPELQPHRSHS 432
PG P + H+ S
Sbjct: 331 QSPGQPAQPAPMVPLHQKQS 350
Score = 54.7 bits (130), Expect = 4e-07
Identities = 109/489 (22%), Positives = 154/489 (31%), Gaps = 128/489 (26%)
Query: 391 LKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR 450
L G P G SP P P PG S + S + P+ G +
Sbjct: 8 LGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMM-GPSPGPPSAGHPIPTQGPGGYPQ 66
Query: 451 DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPG---------SSPLQ 501
D + P + S ++ G + G H G G PP SPL
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGM-RSGGHAGMGPPPSPMDQHSQGYPSPLG 125
Query: 502 GLENCLKEIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLG-QGRGE 560
G E+ +P +S GP+ ++ G + + LG Q RG
Sbjct: 126 GSEHASSPVP----------ASGPSSGPQ------MSSGPGGAPLDGADPQALGQQNRGP 169
Query: 561 AP--TRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESA 618
P LH + Q+ + G P + +G P P
Sbjct: 170 TPFNQNQLHQLRAQIMAYKMLAR---------GQPLPDHLQMAVQGKRPMP--------G 212
Query: 619 LRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKP 678
++ +P P GP P P PG P P P P P R
Sbjct: 213 MQQQMPTLPPPSVSATGPGPGPGPG------------PGPGPG---PAPPNYSRPHGMGG 257
Query: 679 PVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASR 738
P P P G P G G PG P+ P P + P + A+
Sbjct: 258 PNMPPPGPSGVPPGMPGQPPGGPPK-----------------PWP-----EGPMANAAA- 294
Query: 739 GLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQP------- 791
T ++L+P P PS +PP P AA PV+P + P
Sbjct: 295 -----------PTSTPQKLIPPQPTGRPSPAPP---AVPPAASPVMPPQTQSPGQPAQPA 340
Query: 792 ---PCH--------CGKP--------LQQELHSLGAALA---EKLDRLATALAGLAQEVA 829
P H KP LQ+ + L A +A ++L+ L +LAG + A
Sbjct: 341 PMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKA 400
Query: 830 TMRTQVNRL 838
T+ + RL
Sbjct: 401 TIELKALRL 409
Score = 47.8 bits (112), Expect = 5e-05
Identities = 95/420 (22%), Positives = 138/420 (32%), Gaps = 82/420 (19%)
Query: 341 PPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSS 400
PP + +PG P + G G PS GP +A + P + IP G
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLG---PSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG-- 60
Query: 401 PSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAP- 459
P P + Q +P +S +K S++ + +G++S G P +P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEK-------GMSDDPRYNQMKGMGMRSGGHAGMGPPPSPM 113
Query: 460 ----RGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVL 515
+G P+ S + P P S PG +PL G +
Sbjct: 114 DQHSQGYPSPLGGSEHASSPV----PASGPSSGPQMSSGPGGAPLDGADP---------- 159
Query: 516 RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR-----------GEAPTR 564
+RGP P N + LRA+ L +G+ G+ P
Sbjct: 160 ----QALGQQNRGPT---PFNQNQLHQ-LRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP 211
Query: 565 SLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP 624
+ P + S AT PG G P P P G P
Sbjct: 212 GMQQQMPTLPPPSV------------SATGPGPG----PGPGPGPGP---------GPAP 246
Query: 625 VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDLWKPLPQERDRLPSCKPPVPLSP 684
R +GGP+ P PG S G G+ P P W P P+ P + P
Sbjct: 247 PNYSRPHGMGGPN-MPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
Query: 685 CPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL-EKRPRVS--EASRGLE 741
P G P S P P + G P P+ L +K+ R++ + RGL+
Sbjct: 306 QPTGRP---SPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD 362
Score = 47.0 bits (110), Expect = 9e-05
Identities = 96/368 (26%), Positives = 128/368 (34%), Gaps = 95/368 (25%)
Query: 602 PEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPD 661
P G P+P P S G P L GPSP PSPGS+ S G P P P
Sbjct: 7 PLGGTPRPGP-----SPGPGPSPGAML------GPSPGPSPGSAHSMMG-----PSPGP- 49
Query: 662 LWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSGG------SPGEDPRRTEPRY--CSGL 713
PS P+P PGG P + S E +PRY G+
Sbjct: 50 ------------PSAGHPIPTQG-PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGM 96
Query: 714 G------AGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-QGPPELP 766
G AG P P+ Q + G+ P ++ +P GP P
Sbjct: 97 GMRSGGHAGMGPPPSPMDQHSQ-------------GYPSPLGGSEHASSPVPASGPSSGP 143
Query: 767 SESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAAL-AEKL--------DRL 817
S P P + A P + P Q +LH L A + A K+ D L
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFN---QNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 818 ATA------LAGLAQEVATMRT-QVNRLGRRP-----QGPGPMGQASWMWTLPRG----- 860
A + G+ Q++ T+ V+ G P GPGP G A ++ P G
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGPN 259
Query: 861 --PRWAHG--PGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPP 916
P G PG +P GP +P P+ + + + + R P PP
Sbjct: 260 MPPPGPSGVPPG---MPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPP 316
Query: 917 DAPPAEPP 924
PPA P
Sbjct: 317 AVPPAASP 324
Score = 32.0 bits (71), Expect = 3.1
Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 40/163 (24%)
Query: 879 GPTRPKPKILRGQGESCRAGDLQGLSRGTARRAR---PLPPDA----PPAEPPGLHCSSS 931
G RP P G G G S G+A P PP A P P G +
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNM 69
Query: 932 QQLLSSTPSCHA-------------------------APPAHPLLAHTGGHQSPL----- 961
Q+ S H PP P+ H+ G+ SPL
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEH 129
Query: 962 -PPLVPAALPLQGASPPAASADADVPTSGVAPDGIPERPKEPS 1003
VPA+ P G P +S P G P + ++ + P+
Sbjct: 130 ASSPVPASGPSSG--PQMSSGPGGAPLDGADPQALGQQNRGPT 170
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 56.2 bits (134), Expect = 2e-07
Identities = 195/784 (24%), Positives = 250/784 (31%), Gaps = 136/784 (17%)
Query: 80 KGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSC 139
KGA P + L G R P A RGL+ +P A + +S
Sbjct: 309 KGAAGLP-GVAGAPGLPGPRGIPGPVGAAGATGARGLVG--------EPGPAGSKGESGN 359
Query: 140 SSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEA 199
P G QG P P K P + G G P PP S RG A
Sbjct: 360 KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSA---GPPGPPGLRGS--PGSRGLPGADGRA 414
Query: 200 GIS--PGNSPLQGLINCLKEILVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWA 257
G+ PG+ G V GP P P L +G L PGSP
Sbjct: 415 GVMGPPGSRGASGPAG------VRGPNGDAGRPGE-PGL--MGPRGL------PGSPG-N 458
Query: 258 VKTEAVSGDCPLQGLLHCLKELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGP-GYLLT 316
+ G L G+ D P P G R + PG G GP G
Sbjct: 459 IGPAGKEGPVGLPGI-----------DGRPGPIGPAGARGE--PG--NIGFPGPKGPTGD 503
Query: 317 PPPHPDLGAGGLLSVKME-----NSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWG 371
P + D G GL + N+ Q PPGP Q G+ P +G+P PS G
Sbjct: 504 PGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPS-G 562
Query: 372 PEAQAASASSSPLEALEACLKGIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSH 431
P + L E L G P G + PP G S+ P P
Sbjct: 563 PAGEVGKPGERGLHG-EFGLPG--PAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDG 619
Query: 432 SEEATREPVLPLGLQSCVRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSP-----VGNQG 486
++ EP G+ V G + P P G P ++ + G P +GN G
Sbjct: 620 NK---GEP----GVVGAV--GTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPG 670
Query: 487 QHPGKGSP-----PGSSPLQGLENCLKEIPVPVLRPAWPCSSAADR------GPRRAEPR 535
+ +G+P PG + G + PA P S +R GP
Sbjct: 671 RDGARGAPGAVGAPGPAGATGDRG--EAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP 728
Query: 536 NWTADKEGLRAEACESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATR- 594
A + G + E G+ PT + P PA + PG T
Sbjct: 729 AGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGF 788
Query: 595 PG-VWRWLPEG----SAPKPSPLHCLESALRG-------------ILPVRPLRFACVGGP 636
PG R P G S P P + LRG + V P FA GP
Sbjct: 789 PGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGP 848
Query: 637 S-------PSPSPGSSS--------SFSGSEGED--PRPEPDLWKPLPQERDRLPSCKPP 679
S P +PG GS GE P + +P P P + P
Sbjct: 849 SGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGP 908
Query: 680 VPLSPCPG--GTP--AGSSG-----GSPGEDPR---RTEPRYCSGLG-AGTAQDPCPVSQ 726
PG G P AG G G PG D + + E Y +G G A P P
Sbjct: 909 PGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAPGPHGP 968
Query: 727 LEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPA 786
+ P +RG E G P A P GP + + P P P +
Sbjct: 969 V--GPAGKHGNRG-ETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGH 1025
Query: 787 SSLQ 790
+ LQ
Sbjct: 1026 NGLQ 1029
Score = 43.9 bits (102), Expect = 8e-04
Identities = 174/715 (24%), Positives = 227/715 (31%), Gaps = 129/715 (18%)
Query: 121 PDGPTSQPHL----ATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEP 176
P GP P L A GP G+ G P A P P +GP GEP
Sbjct: 64 PPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEP 123
Query: 177 SPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPGPRHPETSPSFLPPL 236
+ +R + + G PG +G++ GP+ P P L
Sbjct: 124 GQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVV---------GPQGARGFPG-TPGL 173
Query: 237 PSL----GTSRLTRADLGPGSP-----PWAVKTEAVSGDCPLQGLLHCLKELPEAQDRHP 287
P G + L PG+P P A G +G LP + R
Sbjct: 174 PGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARG-------LPGERGRVG 226
Query: 288 SPSGVGNRRLQENPG----AWKRGSGG-PGYLLTPPPHPDLGAGGLLSVKMENSWVQSPP 342
+P G R + G A GS G PG+ P P ++GA G N+ P
Sbjct: 227 APGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVG-------NAGPAGPA 279
Query: 343 GPAS-------CQPGRQPLSPSATGDT-----RGVPQPSWGPEAQAASASSSPLEALEAC 390
GP P P +P A G T G+P + P P+ A A
Sbjct: 280 GPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGAT 339
Query: 391 ----LKGIP----PNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLP 442
L G P G S ++ P S PG S E + E + P P
Sbjct: 340 GARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPS----GEEGKRGPNGEAGSAGPPGP 395
Query: 443 LGLQSCV-------RDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSP- 494
GL+ DG + + P G+ + + + D G P G G +G P
Sbjct: 396 PGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRP-GEPGLMGPRGLPG 454
Query: 495 -PGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGPRR----AEPRNWTADKEGLRAEAC 549
PG+ G E + +P RP P A RG P+ T D G +
Sbjct: 455 SPGNIGPAGKEGPV-GLPGIDGRPG-PIGPAGARGEPGNIGFPGPKGPTGD-PGKNGDKG 511
Query: 550 ESARLGQGRGEAPTRSLHLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAP-- 607
+ G P + P P Q G + G P ++ LP S P
Sbjct: 512 HAGLAGARGAPGPDGNNGAQGPP------GPQGVQGGKGEQGPPGPPGFQGLPGPSGPAG 565
Query: 608 ---KPSP--LHCLESALRGILPVRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPDL 662
KP LH E L G R R G P S + G + GS G P PD
Sbjct: 566 EVGKPGERGLHG-EFGLPGPAGPRGER----GPPGESGAAGPTGPI-GSRGPSGPPGPDG 619
Query: 663 WKPLPQERDRLPSCKPPVPLSPCPG-----GTPAGSSG----------GSPGEDPRRTEP 707
K P + + P P S PG G P G G+PG D R P
Sbjct: 620 NKGEPGVVGAVGTAGPSGP-SGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAP 678
Query: 708 RYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGP 762
G P P R EA G PR + + P GP
Sbjct: 679 --------GAVGAPGPAGATGDR---GEAGAAGPAGPAGPRGSPGERGEVGPAGP 722
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.133 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,139,325
Number of Sequences: 37866
Number of extensions: 4712538
Number of successful extensions: 37440
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 1681
Number of HSP's that attempted gapping in prelim test: 22035
Number of HSP's gapped (non-prelim): 12785
length of query: 1030
length of database: 18,247,518
effective HSP length: 112
effective length of query: 918
effective length of database: 14,006,526
effective search space: 12857990868
effective search space used: 12857990868
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.