Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239741134
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo
sapiens]
(144 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo ... 298 1e-81
gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo ... 298 1e-81
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 55 2e-08
gi|18079216 CASK interacting protein 1 [Homo sapiens] 53 1e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 51 4e-07
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 48 2e-06
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 48 2e-06
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-06
gi|110815800 WD repeat domain 32 [Homo sapiens] 47 4e-06
gi|18959210 WIRE protein [Homo sapiens] 47 6e-06
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 46 9e-06
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 46 9e-06
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 46 9e-06
gi|39812378 RAN binding protein 9 [Homo sapiens] 46 1e-05
gi|11386183 WAS protein family, member 2 [Homo sapiens] 45 2e-05
gi|160707881 formin 2 [Homo sapiens] 45 3e-05
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 45 3e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 44 4e-05
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 44 4e-05
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 44 5e-05
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 44 5e-05
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 44 6e-05
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 44 6e-05
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 43 8e-05
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 43 8e-05
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 43 8e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens] 43 8e-05
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 42 1e-04
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 42 2e-04
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 42 2e-04
>gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo
sapiens]
Length = 144
Score = 298 bits (762), Expect = 1e-81
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP 60
MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP
Sbjct: 1 MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP 60
Query: 61 GSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGAT 120
GSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGAT
Sbjct: 61 GSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGAT 120
Query: 121 CALLSRHGPGAGLAGEGSPRKCLY 144
CALLSRHGPGAGLAGEGSPRKCLY
Sbjct: 121 CALLSRHGPGAGLAGEGSPRKCLY 144
>gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo
sapiens]
Length = 144
Score = 298 bits (762), Expect = 1e-81
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP 60
MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP
Sbjct: 1 MAVVASAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP 60
Query: 61 GSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGAT 120
GSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGAT
Sbjct: 61 GSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGAT 120
Query: 121 CALLSRHGPGAGLAGEGSPRKCLY 144
CALLSRHGPGAGLAGEGSPRKCLY
Sbjct: 121 CALLSRHGPGAGLAGEGSPRKCLY 144
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 55.1 bits (131), Expect = 2e-08
Identities = 44/112 (39%), Positives = 49/112 (43%), Gaps = 14/112 (12%)
Query: 19 RPSGPASGATRP-PRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPA 77
R P GAT P P R RG+P AA A+ P P PAPPP +AP R P A
Sbjct: 98 RVQPPRRGATPPAPPRAPRGAP-AAAAAAAPPPT----PAPPPPPAPVAAAAPARAPRAA 152
Query: 78 LAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLSRHGP 129
AA APP+P G A P P RA A P A A+ GP
Sbjct: 153 AAAATAPPSP--------GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGP 196
Score = 51.2 bits (121), Expect = 3e-07
Identities = 43/126 (34%), Positives = 49/126 (38%), Gaps = 19/126 (15%)
Query: 6 SAAGLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQ--------LLLPA 57
+AA A P P PA A P R R + A P PAQ L A
Sbjct: 120 AAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAA 179
Query: 58 PPPGSR----VSLGSAPGRPPPPALAARR-------APPAPPVLIQLRGGDAHPPPAFSR 106
PPP V+ + P R PPPA+AAR PPAPP Q PPP
Sbjct: 180 PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGA 239
Query: 107 ARSSGA 112
R+ GA
Sbjct: 240 VRAGGA 245
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 52.8 bits (125), Expect = 1e-07
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLP----APPPGSRVSLGSAPGR 72
P P P P + V G P +AG S PAP+ P A PPG+ SLG++P +
Sbjct: 1269 PVSPKPPPPPTAPKPVKAVAGLPSGSAGPS-PAPSPARQPPAALAKPPGTPPSLGASPAK 1327
Query: 73 PPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSG 111
PP P A P PP A PPA S G
Sbjct: 1328 PPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPG 1366
Score = 26.6 bits (57), Expect = 7.7
Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 22 GPASGATRPPRRRVRGSPWHAAG-ASFPA----PAQLLLPAP--------PPGSRVSLGS 68
GPA G PPR G H+ AS P P Q+L P P +R
Sbjct: 732 GPAPGT--PPREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQ 789
Query: 69 APGRPPPPALAARRAPPAPPVL 90
A G P PA A + P P +L
Sbjct: 790 ALGGPHGPAPATAKVKPTPQLL 811
Score = 26.6 bits (57), Expect = 7.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 11/34 (32%)
Query: 55 LPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPP 88
LP PPP P PPP LA PP PP
Sbjct: 1191 LPPPPP---------PAEPPPTDLA--HLPPLPP 1213
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 50.8 bits (120), Expect = 4e-07
Identities = 48/134 (35%), Positives = 56/134 (41%), Gaps = 17/134 (12%)
Query: 15 LGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQ---LLLPAPPPGSRVSL-GSAP 70
L PR P A+ A V GSP AAGA APA+ P PPP R G P
Sbjct: 43 LAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGP 102
Query: 71 GRPPPPALAARRAP--PAPPVLIQLR------GGDAHPPPAFSRARS----SGALLEHPG 118
RP PP+ P PAPP +LR G P PA + + + A P
Sbjct: 103 QRPGPPSPRRPLVPAGPAPPA-AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPA 161
Query: 119 ATCALLSRHGPGAG 132
AL +R GPG G
Sbjct: 162 GPAALAARAGPGPG 175
Score = 43.9 bits (102), Expect = 5e-05
Identities = 38/126 (30%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 12 AEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLL---PAPPPGSRVSLGS 68
A +L +P+ P + PP P AA + APA P PPP + +L
Sbjct: 223 AALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLAR 282
Query: 69 APGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLSRHG 128
PG P P A AP PP GG A PA + A G + + G
Sbjct: 283 PPGHPAGPPTA---APAVPPPAAAQNGGSAGAAPAPAPA---------AGGPAGVSGQPG 330
Query: 129 PGAGLA 134
PGA A
Sbjct: 331 PGAAAA 336
Score = 40.0 bits (92), Expect = 7e-04
Identities = 39/130 (30%), Positives = 45/130 (34%), Gaps = 30/130 (23%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLL-------------PAPPPGSR 63
PRRP PA A PP ++R P +AG+ P PA + PA P
Sbjct: 110 PRRPLVPAGPA--PPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALA 167
Query: 64 VSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALL--EHPGATC 121
G PG P P PA P Q G S ALL H A
Sbjct: 168 ARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNG-------------SAALLNSHHAAAPA 214
Query: 122 ALLSRHGPGA 131
L +GP A
Sbjct: 215 VSLVNNGPAA 224
Score = 38.9 bits (89), Expect = 0.002
Identities = 57/194 (29%), Positives = 70/194 (36%), Gaps = 60/194 (30%)
Query: 2 AVVASAAGLGAEILGPRRPSGPASGATRP-------PRRRVRGSPWHAAG---------- 44
A A AAG GP +P+GPA+ A R P P AG
Sbjct: 142 AAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGS 201
Query: 45 --------ASFPA-------PAQLL-LPAP---------PPGSRVSLGSAPGRPPPPALA 79
A+ PA PA LL LP P PP + AP P PPA
Sbjct: 202 AALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP 261
Query: 80 ARRA--------PPAPPVLIQLRGGDAHPP------PAFSRARSSGALLEHPGATCALLS 125
A A PPAP L + G A PP P + A++ G+ GA A
Sbjct: 262 APAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGS----AGAAPAPAP 317
Query: 126 RHGPGAGLAGEGSP 139
G AG++G+ P
Sbjct: 318 AAGGPAGVSGQPGP 331
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 48.1 bits (113), Expect = 2e-06
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 9 GLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGS 68
G+ E+ G RR +RP R + G H A + P+PAQ A PPG +
Sbjct: 150 GVRLELAGARRRLSEGKLVSRP-RALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPA 208
Query: 69 APGRPPPPALAARRAP---PAPPVLIQLRGGDAHPPPA--------FSRARSSGALLE-- 115
AP PP P+ A P P V +++ PP + S ARS G LL
Sbjct: 209 APASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGPIIWVSSPARSLGPLLHAL 268
Query: 116 -HPGATCALL 124
HP TC+ L
Sbjct: 269 LHPPLTCSHL 278
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 48.1 bits (113), Expect = 2e-06
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 9 GLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGS 68
G+ E+ G RR +RP R + G H A + P+PAQ A PPG +
Sbjct: 150 GVRLELAGARRRLSEGKLVSRP-RALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPA 208
Query: 69 APGRPPPPALAARRAP---PAPPVLIQLRGGDAHPPPA--------FSRARSSGALLE-- 115
AP PP P+ A P P V +++ PP + S ARS G LL
Sbjct: 209 APASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGPIIWVSSPARSLGPLLHAL 268
Query: 116 -HPGATCALL 124
HP TC+ L
Sbjct: 269 LHPPLTCSHL 278
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 48.1 bits (113), Expect = 2e-06
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 9 GLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGS 68
G+ E+ G RR +RP R + G H A + P+PAQ A PPG +
Sbjct: 150 GVRLELAGARRRLSEGKLVSRP-RALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPA 208
Query: 69 APGRPPPPALAARRAP---PAPPVLIQLRGGDAHPPPA--------FSRARSSGALLE-- 115
AP PP P+ A P P V +++ PP + S ARS G LL
Sbjct: 209 APASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGPIIWVSSPARSLGPLLHAL 268
Query: 116 -HPGATCALL 124
HP TC+ L
Sbjct: 269 LHPPLTCSHL 278
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 47.4 bits (111), Expect = 4e-06
Identities = 44/133 (33%), Positives = 52/133 (39%), Gaps = 26/133 (19%)
Query: 16 GPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPP 75
GP P G S AGA P P + A P S + G+ PPP
Sbjct: 5 GPHSPGGDGSAG---------------AGAEEPTPHEGQAAATGPPSPLHPGADATHPPP 49
Query: 76 PALAARRAPPAPPVLIQLRGGDAHPP--PAFSRARSSG------ALLEHPGATCALLS-- 125
PA + RR P AP + R G+ P P S A + G PG C S
Sbjct: 50 PARSPRR-PGAPSLSPAPRSGELGLPGAPESSTASAPGEPSPPSPPCRRPGPDCRAKSRG 108
Query: 126 RHGPGAGLAGEGS 138
RHG GAGL G G+
Sbjct: 109 RHGLGAGLGGPGA 121
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 47.0 bits (110), Expect = 6e-06
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 18 RRPSGPASGATRPPRRRVRGSPW--HAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPP 75
R+P G +G + P P ++ P P + L P PP + SL S RPPP
Sbjct: 256 RQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLS--NRPPP 313
Query: 76 PAL---AARRAPPAPPVLIQLRGGDAHPPPAFSRARSS 110
PA + APP PP +I+ DA PPP R S
Sbjct: 314 PARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGS 351
Score = 40.8 bits (94), Expect = 4e-04
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 17 PRRPSGPAS----GATRPPRRRV---RGSPWHAAGASFPAPAQ----LLLPAPPPGSR-- 63
P P+GP+S A P+R R +P G + P P LL PPP +R
Sbjct: 259 PGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDP 318
Query: 64 VSLGSAPGRPPPPAL--AARRAPPAPPVLIQLRGGD----AHPPPAFSR 106
S G+AP PPPP + AR APP PP ++ G + PPP SR
Sbjct: 319 PSRGAAP-PPPPPVIRNGARDAPPPPPP-YRMHGSEPPSRGKPPPPPSR 365
Score = 37.4 bits (85), Expect = 0.004
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 24/103 (23%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLL------LPAPPPGSRVSLGSAP 70
P + P+ + RPP R P + GA+ P P ++ P PPP R+ GS P
Sbjct: 298 PPTSASPSLLSNRPPPP-ARDPP--SRGAAPPPPPPVIRNGARDAPPPPPPYRMH-GSEP 353
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSS 110
G+PPPP PP PP PPP + R S
Sbjct: 354 PSRGKPPPPPSRTPAGPPPPP-----------PPPLRNGHRDS 385
Score = 35.8 bits (81), Expect = 0.013
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 30 PPRRRVRGSPWHAAGASFPAPA-QLLLPAPP-PGSRVSLGSAPGRPPPPALAARRAPPAP 87
PP RR P S APA P PP PG R+ PGR PPA + PP+P
Sbjct: 181 PPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLH----PGREGPPAPPPVKPPPSP 236
Query: 88 PVLIQLRGGD-----AHPPPAF 104
+ +R G A PPP +
Sbjct: 237 ---VNIRTGPSGQSLAPPPPPY 255
Score = 31.2 bits (69), Expect = 0.31
Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 31/127 (24%)
Query: 20 PSGPASGATRPPRRRVRGSPWH---AAGASFPAPAQLLLPAPPPGSRVSLGSAPGR---- 72
PS A+ A RPP G P ++ AS P ++ P+ P SR + S+ G
Sbjct: 116 PSSRAA-APRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSS 174
Query: 73 ----PPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRAR----SSGALLEHPGATCALL 124
PPPP R APP + + A PA++R + + G L HPG
Sbjct: 175 SAPPPPPPG----RRANAPPTPLPMHSSKA---PAYNREKPLPPTPGQRL-HPG------ 220
Query: 125 SRHGPGA 131
R GP A
Sbjct: 221 -REGPPA 226
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 9e-06
Identities = 39/127 (30%), Positives = 49/127 (38%), Gaps = 26/127 (20%)
Query: 11 GAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRV------ 64
G ++L P P GPA G + GSP + ++ P P LLL PPP S
Sbjct: 134 GQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPV 193
Query: 65 -------------SLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSG 111
S+ + P PP A APP PPV A PPA + + G
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPV-------PAPAPPAPASPHTVG 246
Query: 112 ALLEHPG 118
L PG
Sbjct: 247 TRLFPPG 253
Score = 32.0 bits (71), Expect = 0.18
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 29/95 (30%)
Query: 20 PSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALA 79
P+ P G ++ G+P PAP P PPP AP PPP
Sbjct: 371 PASPRLGQSQSQADERAGTP-------PPAP-----PLPPP--------APPLPPP---- 406
Query: 80 ARRAPPAPPVLIQLRGGD--AHPPPAFSRARSSGA 112
APP PP L AHPP F++ S +
Sbjct: 407 ---APPLPPAAPPLPCAQKAAHPPAGFTKTPKSSS 438
Score = 28.5 bits (62), Expect = 2.0
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 73 PPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEH-----PGATCAL-LSR 126
PPPP + PPAP +Q G + PP R++ + L PGA AL SR
Sbjct: 987 PPPPEFSNDPEPPAP--ALQYLGRQSSPP------RNNYSDLRQLPNAGPGAPPALGFSR 1038
Query: 127 HGPGAGLAGEG 137
GA AG G
Sbjct: 1039 FPAGARYAGAG 1049
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 9e-06
Identities = 39/127 (30%), Positives = 49/127 (38%), Gaps = 26/127 (20%)
Query: 11 GAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRV------ 64
G ++L P P GPA G + GSP + ++ P P LLL PPP S
Sbjct: 134 GQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPV 193
Query: 65 -------------SLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSG 111
S+ + P PP A APP PPV A PPA + + G
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPV-------PAPAPPAPASPHTVG 246
Query: 112 ALLEHPG 118
L PG
Sbjct: 247 TRLFPPG 253
Score = 32.0 bits (71), Expect = 0.18
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 29/95 (30%)
Query: 20 PSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALA 79
P+ P G ++ G+P PAP P PPP AP PPP
Sbjct: 371 PASPRLGQSQSQADERAGTP-------PPAP-----PLPPP--------APPLPPP---- 406
Query: 80 ARRAPPAPPVLIQLRGGD--AHPPPAFSRARSSGA 112
APP PP L AHPP F++ S +
Sbjct: 407 ---APPLPPAAPPLPCAQKAAHPPAGFTKTPKSSS 438
Score = 28.5 bits (62), Expect = 2.0
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 73 PPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEH-----PGATCAL-LSR 126
PPPP + PPAP +Q G + PP R++ + L PGA AL SR
Sbjct: 987 PPPPEFSNDPEPPAP--ALQYLGRQSSPP------RNNYSDLRQLPNAGPGAPPALGFSR 1038
Query: 127 HGPGAGLAGEG 137
GA AG G
Sbjct: 1039 FPAGARYAGAG 1049
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 9e-06
Identities = 39/127 (30%), Positives = 49/127 (38%), Gaps = 26/127 (20%)
Query: 11 GAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRV------ 64
G ++L P P GPA G + GSP + ++ P P LLL PPP S
Sbjct: 134 GQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPV 193
Query: 65 -------------SLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSG 111
S+ + P PP A APP PPV A PPA + + G
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPV-------PAPAPPAPASPHTVG 246
Query: 112 ALLEHPG 118
L PG
Sbjct: 247 TRLFPPG 253
Score = 32.0 bits (71), Expect = 0.18
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 29/95 (30%)
Query: 20 PSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALA 79
P+ P G ++ G+P PAP P PPP AP PPP
Sbjct: 371 PASPRLGQSQSQADERAGTP-------PPAP-----PLPPP--------APPLPPP---- 406
Query: 80 ARRAPPAPPVLIQLRGGD--AHPPPAFSRARSSGA 112
APP PP L AHPP F++ S +
Sbjct: 407 ---APPLPPAAPPLPCAQKAAHPPAGFTKTPKSSS 438
Score = 28.5 bits (62), Expect = 2.0
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 73 PPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEH-----PGATCAL-LSR 126
PPPP + PPAP +Q G + PP R++ + L PGA AL SR
Sbjct: 987 PPPPEFSNDPEPPAP--ALQYLGRQSSPP------RNNYSDLRQLPNAGPGAPPALGFSR 1038
Query: 127 HGPGAGLAGEG 137
GA AG G
Sbjct: 1039 FPAGARYAGAG 1049
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 45.8 bits (107), Expect = 1e-05
Identities = 40/112 (35%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 12 AEILGPRRPSGPASGATRPPRRRVRGSPWHAAGAS---FPAPAQLLLPAPPPGSRVSLGS 68
A + G P+ PA A P GSP AG A A LL P PPP +
Sbjct: 28 APVSGVVLPAPPAVSAGSSPA----GSPGGGAGGEGLGAAAAALLLHPPPPPPPATAAPP 83
Query: 69 APGRPPPP---ALAARRAPPAPPVLIQLRG-GDAHPPPAFSRARSSGALLEH 116
P PPPP A A PPAPP L G P PA S+ A H
Sbjct: 84 PPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPALVAGSSAAAPFPH 135
Score = 36.2 bits (82), Expect = 0.010
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 84 PPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLSRHG-PGAGLAGEG 137
PP PP Q + PPP + A SG +L P A A S G PG G GEG
Sbjct: 5 PPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEG 59
Score = 34.7 bits (78), Expect = 0.028
Identities = 33/87 (37%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 5 ASAAGLGAE----ILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPP 60
A GLGA +L P P PA+ A PP P AS APA P PP
Sbjct: 55 AGGEGLGAAAAALLLHPPPPPPPATAAPPPP------PPPPPPPASAAAPAS--GPPAPP 106
Query: 61 GSRVSLGSAPGRPPPPALAARRAPPAP 87
G G A G P PAL A + AP
Sbjct: 107 GLAAGPGPA-GGAPTPALVAGSSAAAP 132
Score = 28.9 bits (63), Expect = 1.6
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 56 PAPPPGSRVSLGSAPGRPPPPALA--ARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGAL 113
P PPP + PPP ALA + PAPP + A PA S +G
Sbjct: 5 PPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAV------SAGSSPAGSPGGGAGG- 57
Query: 114 LEHPGATCALLSRHGP 129
E GA A L H P
Sbjct: 58 -EGLGAAAAALLLHPP 72
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 45.4 bits (106), Expect = 2e-05
Identities = 38/114 (33%), Positives = 46/114 (40%), Gaps = 23/114 (20%)
Query: 11 GAEILGPRRPS--GPASGATRPPRRRVRG-SPWHAAGASFPAPAQLLLPAPPPGSRVSLG 67
G+ + GP+R S P+ PP G P A + P P ++ PPP V G
Sbjct: 283 GSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFG 342
Query: 68 SAPGRPPPPA---------LAARRAPPAPPV----------LIQLRGGDAHPPP 102
S PG PPPP+ AA PP PP L Q GG PPP
Sbjct: 343 S-PGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPP 395
Score = 37.4 bits (85), Expect = 0.004
Identities = 35/112 (31%), Positives = 38/112 (33%), Gaps = 7/112 (6%)
Query: 17 PRRPSGPASGATRPPRRRVRGSP---WHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRP 73
P P G S T PP P + A P PA PPP G AP P
Sbjct: 335 PPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPP 394
Query: 74 PPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLS 125
PPP P PP G A PPP + +L A LLS
Sbjct: 395 PPPPPPG----PPPPPFTGADGQPAIPPPLSDTTKPKSSLPAVSDARSDLLS 442
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 44.7 bits (104), Expect = 3e-05
Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 11 GAEILGPRRPSGPASGATRPPRRRVRG----SPWHAAGASFPAP---AQLLLPAPPPGSR 63
G E+L P P P +G PP G P AG P P A + P P PG+
Sbjct: 904 GTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAG 963
Query: 64 VSLGS---APGRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
+ L G PPPP L PP PP L G PPP
Sbjct: 964 IPLPPPLPGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1001
Score = 44.7 bits (104), Expect = 3e-05
Identities = 35/99 (35%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP V + P
Sbjct: 1054 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPL 1113
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSR 106
G PPPP L PP PP L G PPP R
Sbjct: 1114 PGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPPPLPR 1148
Score = 42.7 bits (99), Expect = 1e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP + P
Sbjct: 944 PPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1003
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1004 PGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1034
Score = 42.7 bits (99), Expect = 1e-04
Identities = 33/86 (38%), Positives = 34/86 (39%), Gaps = 20/86 (23%)
Query: 20 PSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAPGRPPPP 76
P P GA PP P GA P P L +P PPP RV G PPPP
Sbjct: 1109 PPPPLPGAGIPP-------PPPLPGAGIPPPPPLPGAGIPPPPPLPRV------GIPPPP 1155
Query: 77 ALAARRAPPAPPVLIQLRGGDAHPPP 102
L PP PP L G PPP
Sbjct: 1156 PLPGAGIPPPPP----LPGAGIPPPP 1177
Score = 42.0 bits (97), Expect = 2e-04
Identities = 37/104 (35%), Positives = 41/104 (39%), Gaps = 20/104 (19%)
Query: 11 GAEILGPRRPSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSR 63
GA IL P P GA PP + G+ P GA P P L +P PPP
Sbjct: 928 GAGIL----PLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPG 983
Query: 64 VSLGSAP-----GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
+ P G PPPP L PP PP L G PPP
Sbjct: 984 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1023
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP + P
Sbjct: 977 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1036
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1037 PGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1067
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP + P
Sbjct: 988 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1047
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1048 PGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1078
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP + P
Sbjct: 999 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1058
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1059 PGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1089
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP + P
Sbjct: 1010 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1069
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1070 PGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1100
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP + P
Sbjct: 1043 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1102
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1103 PGVGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1133
Score = 42.0 bits (97), Expect = 2e-04
Identities = 32/91 (35%), Positives = 35/91 (38%), Gaps = 15/91 (16%)
Query: 20 PSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-----G 71
P P GA PP P GA P P L +P PPP V + P G
Sbjct: 1153 PPPPLPGAGIPP-------PPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAG 1205
Query: 72 RPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
PPPP L PPAP + G PPP
Sbjct: 1206 IPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1236
Score = 41.2 bits (95), Expect = 3e-04
Identities = 33/96 (34%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 17 PRRPSGPASGATRPPRRRVRG--SPWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP- 70
P P P +G PP G P GA P P L +P PPP + P
Sbjct: 954 PPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1013
Query: 71 ----GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1014 LPGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1045
Score = 41.2 bits (95), Expect = 3e-04
Identities = 33/96 (34%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 17 PRRPSGPASGATRPPRRRVRG--SPWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP- 70
P P P +G PP G P GA P P L +P PPP + P
Sbjct: 965 PLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1024
Query: 71 ----GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1025 LPGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPP 1056
Score = 40.8 bits (94), Expect = 4e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAP-- 70
P P GA PP + G+ P GA P P L +P PPP + P
Sbjct: 1021 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1080
Query: 71 ---GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G PPPP L PP PP L G PPP
Sbjct: 1081 PGAGIPPPPPLPGAGIPPPPP----LPGVGIPPPP 1111
Score = 35.0 bits (79), Expect = 0.022
Identities = 28/89 (31%), Positives = 32/89 (35%), Gaps = 18/89 (20%)
Query: 21 SGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAA 80
S P G PP P G + P +P PPP G+ PPPP L
Sbjct: 869 SMPGLGMVPPP-------PPPLPGMTVPTLPSTAIPQPPP----LQGTEMLPPPPPPLPG 917
Query: 81 RRAPPAPPV-------LIQLRGGDAHPPP 102
PP PP+ L L G PPP
Sbjct: 918 AGIPPPPPLPGAGILPLPPLPGAGIPPPP 946
Score = 33.9 bits (76), Expect = 0.048
Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Query: 20 PSGPASGATRPPRRRVRG----SPWHAAGASFPAPAQLL---LPAPPPGSRVSLGSAPGR 72
P P GA PP + G P G P P L +P PPP + + AP
Sbjct: 1164 PPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAP 1223
Query: 73 PPPPALAARRAPP-----APPVLIQLRGGDAHPPP 102
P PP PP PP+L Q+ G P P
Sbjct: 1224 PLPPPGTGIPPPPLLPVSGPPLLPQV-GSSTLPTP 1257
Score = 32.0 bits (71), Expect = 0.18
Identities = 28/91 (30%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 20 PSGPASGATRPPRRRVRGS----PWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPP 75
P P GA PP + G+ P G P P L PP + P PP
Sbjct: 1076 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1135
Query: 76 PALAARRAPPAPPVLI----QLRGGDAHPPP 102
P PP P V I L G PPP
Sbjct: 1136 PGAGIPPPPPLPRVGIPPPPPLPGAGIPPPP 1166
Score = 31.6 bits (70), Expect = 0.24
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 39 PWHAAGASFPAPAQLLLPAPP-PGSRV-SLGSAPGRPPPPALAARRAPPAPPVLIQLRGG 96
P + +S P + P PP PG V +L S PPP PP PP L G
Sbjct: 862 PCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPP---PLPGA 918
Query: 97 DAHPPP 102
PPP
Sbjct: 919 GIPPPP 924
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 44.7 bits (104), Expect = 3e-05
Identities = 39/117 (33%), Positives = 43/117 (36%), Gaps = 15/117 (12%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPP 76
P P+GP G RPP + G P P P L P PPP G P P PP
Sbjct: 221 PSLPAGPP-GVKRPPPPLMNGLPPRP-----PLPESL--PPPPP------GGLPLPPMPP 266
Query: 77 ALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLSRHGPGAGL 133
A PP PP L G HPP +SG PG H P G+
Sbjct: 267 TGPAPSGPPGPPQLPPPAPG-VHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGV 322
Score = 30.4 bits (67), Expect = 0.54
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 16/53 (30%)
Query: 50 PAQLLLPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
PA LPA PPG + RPPPP + PP PP+ ++ PPP
Sbjct: 218 PAPPSLPAGPPGVK--------RPPPPLMNG--LPPRPPL------PESLPPP 254
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 44.3 bits (103), Expect = 4e-05
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLL--PAPPPGSRVSLGSAPG--- 71
P P P + PP R RG+P P P++ P PPP SR S+ P
Sbjct: 288 PPPPPPPHNSGPPPPPARGRGAPP-------PPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 72 ---RPPPPAL--AARRAPPAPPVLIQLRGGDAHPPP 102
PPPPAL +A PP PP + G A PPP
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPP 376
Score = 41.2 bits (95), Expect = 3e-04
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 20 PSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALA 79
P P+ G PP P H +G P PA+ PPP SR + P PPPP+
Sbjct: 279 PPPPSRGGPPPPP-----PPPHNSGPP-PPPARGRGAPPPPPSRAPTAAPP--PPPPSRP 330
Query: 80 ARRAPPAPPVLIQLRGGDAHPPPAFSRARSSG 111
+ PP PP + PPPA + SG
Sbjct: 331 SVAVPPPPPNRMY-----PPPPPALPSSAPSG 357
Score = 40.8 bits (94), Expect = 4e-04
Identities = 39/125 (31%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 16 GPRRPSGPASGATRPPRRRVRGS------PWHAAGASFPAPAQLLLPAPPPGSRVSLGSA 69
GP P GA PP R + P + A P P + P PPP S S
Sbjct: 298 GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSG 357
Query: 70 PGRPPPPALAARR-APPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLSRHG 128
P PPP L APP PP G PPP + + G ALL +
Sbjct: 358 PPPPPPSVLGVGPVAPPPPPPPPPPPG---PPPPPGLPSDGDHQVPTTAGNKAALLDQIR 414
Query: 129 PGAGL 133
GA L
Sbjct: 415 EGAQL 419
Score = 36.2 bits (82), Expect = 0.010
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 10/47 (21%)
Query: 56 PAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
P PPP SR G P PPPP PP PP RG A PPP
Sbjct: 277 PPPPPPSR---GGPPPPPPPP---HNSGPPPPPA----RGRGAPPPP 313
Score = 34.7 bits (78), Expect = 0.028
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 32 RRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLI 91
RR+ P + G P P PPP G+ PPPP+ A APP PP
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAP---PPPPSRAPTAAPPPPP--- 326
Query: 92 QLRGGDAHPPPAFSR 106
R A PPP +R
Sbjct: 327 PSRPSVAVPPPPPNR 341
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 44.3 bits (103), Expect = 4e-05
Identities = 34/87 (39%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 5 ASAAGLGAEILGPRRPSGPASGATRPPRR---RVRGSPWHAAGASFPAPAQLLLPAPPPG 61
ASAAG GA + RP G + +T PPR R G P A P P PAPPP
Sbjct: 85 ASAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPGGP-----ALRPTPRPCAGPAPPPA 139
Query: 62 SRVSLGSAPGRPPPPALAARRAPPAPP 88
SR P R P RRA P
Sbjct: 140 SRDCRCRRPRRWPRAGRRGRRAGACKP 166
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 43.9 bits (102), Expect = 5e-05
Identities = 40/114 (35%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Query: 21 SGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAA 80
SGP S PP+R + A+ SFPAP LP P R+ A RP PP
Sbjct: 740 SGP-SERPGPPQRALLARGTKASALSFPAPPSRPLPPDPVSKRLQAELA-DRPNPPT--- 794
Query: 81 RRAPPAPPVLIQLRG-GDAHPPPAFSRARSSGALLEHPGATCALLSRHGPGAGL 133
R PA PV+ + G A PPP L P C GPGAG+
Sbjct: 795 -RPLPADPVVRSPKSQGPAKPPP------PRKPLPADPQGRCPSGDLPGPGAGI 841
Score = 32.0 bits (71), Expect = 0.18
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 19 RPSGPASGATRP-PRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPP--P 75
RP+ P TRP P V SP + G + P P + LPA P G R G PG P
Sbjct: 789 RPNPP----TRPLPADPVVRSP-KSQGPAKPPPPRKPLPADPQG-RCPSGDLPGPGAGIP 842
Query: 76 PALAARRAPPAPPVLIQL 93
P + R P PP + L
Sbjct: 843 PLVVPSRPAPPPPTVSSL 860
Score = 26.9 bits (58), Expect = 5.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Query: 16 GPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSL 66
GP +P P P+ R GA P PAPPP + SL
Sbjct: 810 GPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPPPTVSSL 860
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 43.9 bits (102), Expect = 5e-05
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 16/82 (19%)
Query: 9 GLGAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGS 68
G G+ PR P+ SG PP G+ A GA+ AP + +PAPPP
Sbjct: 125 GPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPP-------- 176
Query: 69 APGRPPPPALAARRAPPAPPVL 90
P PPPP PP PP L
Sbjct: 177 -PTPPPPP-------PPLPPPL 190
Score = 35.8 bits (81), Expect = 0.013
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 16/100 (16%)
Query: 20 PSGPASGATRPPRRRVRGSPWHAAG--ASFPAP------AQLLLPAPPPGSRVSLGSAPG 71
P+ PA A PP P+ + AS PAP + P P P S + P
Sbjct: 279 PASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQ 338
Query: 72 RPPPPALAARRAPPAPPVLIQLR--------GGDAHPPPA 103
+ AL A APP +Q + GG +PPPA
Sbjct: 339 KAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPPPA 378
Score = 29.6 bits (65), Expect = 0.91
Identities = 28/85 (32%), Positives = 30/85 (35%), Gaps = 11/85 (12%)
Query: 15 LGPRRPSGPASGATRPPRRRVRGS-----PWHAAGASFPAPAQLL----LPAP--PPGSR 63
L P P + PP V S P SF AP Q LPAP PPGS+
Sbjct: 296 LPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQ 355
Query: 64 VSLGSAPGRPPPPALAARRAPPAPP 88
L P PPAPP
Sbjct: 356 PFLQKKRHGRPGAGGGKLNPPPAPP 380
Score = 28.9 bits (63), Expect = 1.6
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 8/37 (21%)
Query: 55 LPAPPPGSRVSLGSAPGRPPPPALAARRAPP--APPV 89
+P PPP P PPPP L A PP APPV
Sbjct: 1 MPVPPPPP------PPLPPPPPPLGAPPPPPPSAPPV 31
Score = 28.9 bits (63), Expect = 1.6
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 48 PAPAQLLLPAPPPGSRVSLGSA------PGRPPPP----ALAARRAP-PAPPVLIQLRGG 96
P P LL P PG + S P PPPP A + RA PAPP L +
Sbjct: 261 PPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPP-LPGVNSS 319
Query: 97 DAHPPPAFSRARSSGALLEHPGATCALLSRHGPGA 131
PPP ++ S A + GA PG+
Sbjct: 320 SETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGS 354
Score = 27.7 bits (60), Expect = 3.5
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 11/50 (22%)
Query: 48 PAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGD 97
P P LP PPP LG+ P PPPP+ APP LR D
Sbjct: 4 PPPPPPPLPPPPP----PLGAPP--PPPPS-----APPVSTDTSSLRRAD 42
Score = 26.6 bits (57), Expect = 7.7
Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 9/83 (10%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPP-- 74
P P P ++ P + + P + P A + APPP + P PP
Sbjct: 182 PPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPAS 241
Query: 75 -------PPALAARRAPPAPPVL 90
P LA PP PP L
Sbjct: 242 VLSDKAVKPQLAPLHLPPIPPPL 264
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 43.5 bits (101), Expect = 6e-05
Identities = 32/76 (42%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 16 GPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRP-- 73
GP+ G + PP + RG+P A S P P +PPP R SL S P RP
Sbjct: 83 GPQGGGGGDIASPLPPALQPRGAPAVPAAPS-PGPLPARPSSPPP--RPSLPSGPHRPVL 139
Query: 74 PPPALAARRAPPAPPV 89
PP ALAA R P A P+
Sbjct: 140 PPSALAAPRPPLARPL 155
Score = 32.3 bits (72), Expect = 0.14
Identities = 32/88 (36%), Positives = 35/88 (39%), Gaps = 19/88 (21%)
Query: 23 PASGATRPPRRRVRGSPWHAAGASFPAPAQL--LLPAPP----PGSRVSLGSAPGRPPPP 76
PA A PP R R PA A+L L A P PG + G P PP
Sbjct: 50 PAPAAAHPPAPRER-----------PAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPP 98
Query: 77 ALAARRAP--PAPPVLIQLRGGDAHPPP 102
AL R AP PA P L + PPP
Sbjct: 99 ALQPRGAPAVPAAPSPGPLPARPSSPPP 126
Score = 28.1 bits (61), Expect = 2.7
Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 10/80 (12%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPP 76
P RPS P PPR + P P+ L P PP + GS R
Sbjct: 118 PARPSSP------PPRPSLPSGPHRPV----LPPSALAAPRPPLARPLPQGSVTAREQEQ 167
Query: 77 ALAARRAPPAPPVLIQLRGG 96
+RR AP L + G
Sbjct: 168 RPRSRRRAGAPEALGPVHAG 187
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 43.5 bits (101), Expect = 6e-05
Identities = 32/76 (42%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 16 GPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRP-- 73
GP+ G + PP + RG+P A S P P +PPP R SL S P RP
Sbjct: 83 GPQGGGGGDIASPLPPALQPRGAPAVPAAPS-PGPLPARPSSPPP--RPSLPSGPHRPVL 139
Query: 74 PPPALAARRAPPAPPV 89
PP ALAA R P A P+
Sbjct: 140 PPSALAAPRPPLARPL 155
Score = 32.3 bits (72), Expect = 0.14
Identities = 32/88 (36%), Positives = 35/88 (39%), Gaps = 19/88 (21%)
Query: 23 PASGATRPPRRRVRGSPWHAAGASFPAPAQL--LLPAPP----PGSRVSLGSAPGRPPPP 76
PA A PP R R PA A+L L A P PG + G P PP
Sbjct: 50 PAPAAAHPPAPRER-----------PAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPP 98
Query: 77 ALAARRAP--PAPPVLIQLRGGDAHPPP 102
AL R AP PA P L + PPP
Sbjct: 99 ALQPRGAPAVPAAPSPGPLPARPSSPPP 126
Score = 27.3 bits (59), Expect = 4.5
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPP 76
P RPS P PPR + P P+ L P PP + GS R
Sbjct: 118 PARPSSP------PPRPSLPSGPHRPV----LPPSALAAPRPPLARPLPQGSVTAREQEQ 167
Query: 77 ALAARRAPPAPPVL 90
+RR AP L
Sbjct: 168 RPRSRRRAGAPEAL 181
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 43.1 bits (100), Expect = 8e-05
Identities = 38/114 (33%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPP 76
P RP G G RR + G+P PA LL P PP G G PG PP P
Sbjct: 10 PARP-GTTGGGGGGGRRGLGGAPRQRV------PALLLPPGPPVG-----GGGPGAPPSP 57
Query: 77 ALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLSRHGPG 130
A A A + GG A A S + SS + ++ L R GPG
Sbjct: 58 PAVAAAAAAAGSSGAGVPGGAAAASAASSSSASSSSSSSSSASSGPALLRVGPG 111
Score = 27.7 bits (60), Expect = 3.5
Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 18/104 (17%)
Query: 21 SGPASGATRPPRRRVRGSPWHA----AGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPP 76
SG A PP + W + P + ++PAP P PG P P
Sbjct: 1786 SGMLPNAVLPPSLDHNYAQWQEREENSHTEQPPLMKKIIPAPKP-------KGPGEPDSP 1838
Query: 77 ALAARRAPPAPPVLIQLR----GGDAHPPPAFSRARSSGALLEH 116
PP PP+L R + +PPP R L +
Sbjct: 1839 TPLH---PPTPPILSTDRSREDSPELNPPPGIEDNRQCALCLTY 1879
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 43.1 bits (100), Expect = 8e-05
Identities = 38/114 (33%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 21 SGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAA 80
SGP+ P R + A+ SFPAP LP P R+ A RP PP
Sbjct: 740 SGPSERPGPPQRALLARGTKQASALSFPAPPSRPLPPDPVSKRLQAELA-DRPNPPT--- 795
Query: 81 RRAPPAPPVLIQLRG-GDAHPPPAFSRARSSGALLEHPGATCALLSRHGPGAGL 133
R PA PV+ + G A PPP L P C GPGAG+
Sbjct: 796 -RPLPADPVVRSPKSQGPAKPPP------PRKPLPADPQGRCPSGDLPGPGAGI 842
Score = 32.0 bits (71), Expect = 0.18
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 19 RPSGPASGATRP-PRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPP--P 75
RP+ P TRP P V SP + G + P P + LPA P G R G PG P
Sbjct: 790 RPNPP----TRPLPADPVVRSP-KSQGPAKPPPPRKPLPADPQG-RCPSGDLPGPGAGIP 843
Query: 76 PALAARRAPPAPPVLIQL 93
P + R P PP + L
Sbjct: 844 PLVVPSRPAPPPPTVSSL 861
Score = 26.9 bits (58), Expect = 5.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Query: 16 GPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSL 66
GP +P P P+ R GA P PAPPP + SL
Sbjct: 811 GPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPPPTVSSL 861
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 43.1 bits (100), Expect = 8e-05
Identities = 43/139 (30%), Positives = 52/139 (37%), Gaps = 32/139 (23%)
Query: 16 GPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPP 75
GP R GP+ R +P + AGA P P PP S+ +P PPP
Sbjct: 266 GPPRTGGPSPAGPAAARLAEDPAPHYPAGAPAPGPHPAAGEVPPGPGGPSVIHSPPPPPP 325
Query: 76 PALAAR--------------------------RAPPAP-PVLIQLRGGD-AHPPPAFSRA 107
PA+ A+ PP P P+ Q GG A P PA S
Sbjct: 326 PAVLAKPKLWSLAEIATSSDKVKDGGGGNEGSPCPPCPGPIAGQALGGSRASPAPAPS-- 383
Query: 108 RSSGALLEHPGATCALLSR 126
RS A PG T +LSR
Sbjct: 384 RSPSAQCPFPGGT--VLSR 400
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 43.1 bits (100), Expect = 8e-05
Identities = 40/107 (37%), Positives = 43/107 (40%), Gaps = 24/107 (22%)
Query: 10 LGAEILGPRRPSGPASGAT------RPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSR 63
LG P RP GP +G PP R G P G P P +LL P PPPG
Sbjct: 413 LGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMP----GLRGPLP-RLLPPGPPPGRP 467
Query: 64 VSLGSAPGRPPPPAL---------AARRAPPAPPVLIQLRGGDAHPP 101
G PG PPP L R PPAPP + R G PP
Sbjct: 468 P--GPPPG--PPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPP 510
Score = 28.5 bits (62), Expect = 2.0
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 41 HAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPV 89
H+ G S + Q P P S++ AP P PP L PPAPP+
Sbjct: 379 HSDGTSTASSQQQAPPQSVPPSQIQ---APPMPGPPPLG---PPPAPPL 421
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 42.4 bits (98), Expect = 1e-04
Identities = 48/155 (30%), Positives = 56/155 (36%), Gaps = 30/155 (19%)
Query: 5 ASAAGLGAEILGPRRPSGPAS-GATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGS- 62
AS + +I GPR GP + G P RR G PAP LPA PPG+
Sbjct: 19 ASTTWVPCQICGPRERHGPRTPGGQLPGARR-------GPGPRRPAP----LPARPPGAL 67
Query: 63 -------RVSLGSAPGRPPPPALAARRAPPAP------PVLIQLRGGDAHPPPAFSRARS 109
R G P RP P A P P P L G P P + RS
Sbjct: 68 GSVLRPLRARPGCRPRRPHPAARCLPLRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRS 127
Query: 110 SGALLEHPGATCALLSRHGPGAG----LAGEGSPR 140
S L A ++ G+G G GSPR
Sbjct: 128 SALALAGGAAPGVARAQRPGGSGGRSHPGGPGSPR 162
Score = 27.3 bits (59), Expect = 4.5
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 11 GAEILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAP 70
G +GP GPA+ P+R VR + A A+ P L L P +
Sbjct: 163 GGGTVGPG-DRGPAAADGGRPQRTVRAAETRGAAAAPP----LTLEGPVQSHHGTPALTQ 217
Query: 71 GRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
G P P A+ PV ++ GG PPP
Sbjct: 218 G-PQSPRDGAQLGACTRPVDVRDSGGRPLPPP 248
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 42.0 bits (97), Expect = 2e-04
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 58 PPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHP 117
PPP + + + P RPPPP PP Q+ G HPPPA + G P
Sbjct: 1334 PPPPATLKVAEPPPRPPPP----------PPPTGQMNGTVDHPPPAAPERKPLGTAPHCP 1383
Query: 118 GATCALLSRHGPGAGLAGEGSP 139
R G A EG+P
Sbjct: 1384 RLPLRKTYRENVGGPGAPEGTP 1405
Score = 38.9 bits (89), Expect = 0.002
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 21/119 (17%)
Query: 4 VASAAGLGAEI---------------LGPRRPSGPASGATRPPRRRVRGSPWHAAGASFP 48
VA AGLG + P + GP+S + P + + SP P
Sbjct: 739 VAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSP------HLP 792
Query: 49 APAQLLLPAPPPGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPPAFSRA 107
+P P+ PP S+ P PP +APP P + ++ PPPA + A
Sbjct: 793 SPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPA 851
Score = 30.0 bits (66), Expect = 0.70
Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 15/98 (15%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSA-----PG 71
P S PA A PP+ +R G PAP LP S V+ S P
Sbjct: 844 PPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPH---LPPSSTSSAVASSSETSSRLPA 900
Query: 72 RPP-------PPALAARRAPPAPPVLIQLRGGDAHPPP 102
P PP+ ++P PP L + A PPP
Sbjct: 901 PTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPP 938
Score = 29.6 bits (65), Expect = 0.91
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 39 PWHAAGASFPAPAQLLLPAPP------PGSRVSLGSAPGRPPPPALAARRAPPAPPVLIQ 92
P A G PA +++ APP P + V+ G+ G P + A+ P P
Sbjct: 708 PLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAP 767
Query: 93 LRGGDAHPPPA 103
L+G P+
Sbjct: 768 LKGPGPSSSPS 778
Score = 27.3 bits (59), Expect = 4.5
Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 19/120 (15%)
Query: 22 GPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAP--GRPPPPALA 79
GP T PP + P PA P PPP + + P P P AL
Sbjct: 915 GPHKSPTPPPTLHL-----------VPEPAA---PPPPPPRTFQMVTTPFPALPQPKALL 960
Query: 80 ARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGALLEHPGATCALLSRHGPGAGLAGEGSP 139
R +++Q + G A PA + +S L P A+ + + G A +P
Sbjct: 961 ERFHQVPSGIILQNKAGGA---PAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAP 1017
Score = 26.6 bits (57), Expect = 7.7
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 28/93 (30%)
Query: 20 PSGPAS-----GATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPP 74
P+GPA+ G T PP +A A P L+ PA P + G A
Sbjct: 574 PAGPAATTVLQGVTLPP----------SAVAMLNTPDGLVQPATPAAAT---GEAA---- 616
Query: 75 PPALAARRAPPAPPVL-----IQLRGGDAHPPP 102
P L + AP APP + + L+ A PP
Sbjct: 617 -PVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPP 648
Score = 26.6 bits (57), Expect = 7.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 62 SRVSLGSAPGRPPPPA---LAARRAPPAPPVLIQLRGGDAHPPPAFSRARSSGAL 113
S ++L APGR P P+ A+ P +PP L H P A+ + +G L
Sbjct: 1507 SILNLQQAPGRTPAPSYPHAASAGTPASPPPL--------HRPEAYPPSSHNGGL 1553
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 41.6 bits (96), Expect = 2e-04
Identities = 35/99 (35%), Positives = 40/99 (40%), Gaps = 12/99 (12%)
Query: 11 GAEILGPRRPSGPASGATRPPRRRVRGSPWHAA---GASFPAPAQL----LLPAPPPGSR 63
G I P SG A+ PP G P ++ G + P P L +P PPP
Sbjct: 627 GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLP 686
Query: 64 VSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
S G P PPPP PP PP L GG PPP
Sbjct: 687 GSAGIPP--PPPPLPGEAGMPPPPP---PLPGGPGIPPP 720
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 13 EILGPRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGR 72
E +G PS G PP + GS P P +P PPP G P
Sbjct: 650 EGVGIPSPSSLPGGTAIPPPPPLPGSA-RIPPPPPPLPGSAGIPPPPPPLPGEAGMPP-- 706
Query: 73 PPPPALAARRAPPAPPVLIQLRGGDAHPPP 102
PPPP PP PP GG PPP
Sbjct: 707 PPPPLPGGPGIPPPPP----FPGGPGIPPP 732
Score = 37.7 bits (86), Expect = 0.003
Identities = 29/88 (32%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 17 PRRPSGPASGATRPPRRRVRGSPWHAAGASFPAPAQLLLPAPPPGSRVSLGSAPGRPPPP 76
P P P S PP + GS P P + +P PPP L PG PPPP
Sbjct: 667 PPPPPLPGSARIPPPPPPLPGSAGIPPPPP-PLPGEAGMPPPPP----PLPGGPGIPPPP 721
Query: 77 ALAARRAPPAPPVLIQLRGGDAHPPPAF 104
P PP G PPP F
Sbjct: 722 PFPGGPGIPPPP-----PGMGMPPPPPF 744
Score = 34.3 bits (77), Expect = 0.037
Identities = 38/124 (30%), Positives = 47/124 (37%), Gaps = 29/124 (23%)
Query: 1 MAVVASAAGLGAEILGPRRPSGPA------SGATRPPRRRVRGSPWHAAGASFPAPAQLL 54
MA +++AA + R P PA SG PP P ++ P P
Sbjct: 553 MASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPP-------PPAPGDSTTPPPPPPP 605
Query: 55 LPAPPP-GSRVSLGSAPGRP------PPPALAARRAPPAPPVLIQ---------LRGGDA 98
P PPP V + S P P PPP L+ P PP L + L GG A
Sbjct: 606 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTA 665
Query: 99 HPPP 102
PPP
Sbjct: 666 IPPP 669
Score = 28.5 bits (62), Expect = 2.0
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 53 LLLPAPPPG-SRVSLGSAPGRPPPPALAARRAPPAPPVLIQLRGGDA-HPPPAFS 105
++ P P PG S P PPPP L +PP L GG A PPP S
Sbjct: 586 IIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPP---SLPGGTAISPPPPLS 637
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,609,711
Number of Sequences: 37866
Number of extensions: 733507
Number of successful extensions: 12699
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 1422
Number of HSP's that attempted gapping in prelim test: 6012
Number of HSP's gapped (non-prelim): 5475
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.