C9orf11 16489

Name: C9orf11	Sequence: fasta or formatted (294aa)		NCBI GI: 239582757
Description: Acr formation associated factor isoform 1		Referenced in: Testes and Sperm
Other entries for this name: alt prot [265aa] Acr formation associated factor isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 15 1 C cysteine 0.7 2 1 D aspartate 5.4 16 2 E glutamate 8.2 24 3 F phenylalanine 4.4 13 1 G glycine 3.4 10 1 H histidine 2.0 6 1 I isoleucine 5.8 17 2 K lysine 6.5 19 1 L leucine 8.2 24 3 M methionine 3.1 9 1 N asparagine 7.5 22 1 P proline 5.1 15 1 Q glutamine 2.7 8 1 R arginine 2.4 7 2 S serine 10.9 32 2 T threonine 10.2 30 3 V valine 5.1 15 2 W tryptophan 0.3 1 1 Y tyrosine 3.1 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Acr formation associated factor isoform 1 C9orf11 0.866 Acr formation associated factor isoform 2 NUP153 0.011 nucleoporin 153kDa NEO1 0.011 neogenin homolog 1 CSRNP2 0.011 TGF-beta induced apoptosis protein 12 MUC17 0.011 mucin 17 SYCP1 0.009 synaptonemal complex protein 1 MUC15 0.009 mucin 15 isoform c DST 0.009 dystonin isoform 1eB precursor MAGEC1 0.007 melanoma antigen family C, 1 PNN 0.007 pinin, desmosome associated protein BAT2D1 0.007 HBxAg transactivated protein 2 EID3 0.007 EP300 interacting inhibitor of differentiation 3 [Ho... COL6A1 0.007 collagen, type VI, alpha 1 precursor WBP4 0.007 WW domain-containing binding protein 4 PKHD1L1 0.007 fibrocystin L MUC15 0.005 mucin 15 isoform a MUC15 0.005 mucin 15 isoform b IGSF10 0.005 immunoglobulin superfamily, member 10 PRG4 0.005 proteoglycan 4 isoform D PRG4 0.005 proteoglycan 4 isoform C PRG4 0.005 proteoglycan 4 isoform B PRG4 0.005 proteoglycan 4 isoform A LOC100131514 0.005 PREDICTED: similar to hCG1747327, partial LOC100131251 0.005 PREDICTED: hypothetical protein LOC100131251 0.005 PREDICTED: hypothetical protein CYLC1 0.005 cylicin, basic protein of sperm head cytoskeleton 1... ZCCHC10 0.005 zinc finger, CCHC domain containing 10 SIGLEC10 0.005 sialic acid binding Ig-like lectin 10 C14orf174 0.005 hypothetical protein LOC161394 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.