Guide to the Human Genome
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Name: C9orf11 Sequence: fasta or formatted (265aa) NCBI GI: 239582759
Description:

Acr formation associated factor isoform 2

Referenced in:

Testes and Sperm

Other entries for this name:
alt prot [294aa] Acr formation associated factor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         14           1
 C cysteine            0.8          2           1
 D aspartate           5.7         15           2
 E glutamate           7.2         19           2
 F phenylalanine       4.9         13           1
 G glycine             4.2         11           1
 H histidine           1.9          5           1
 I isoleucine          5.7         15           2
 K lysine              6.0         16           1
 L leucine             9.1         24           3
 M methionine          3.4          9           1
 N asparagine          7.5         20           1
 P proline             5.3         14           1
 Q glutamine           2.6          7           1
 R arginine            2.3          6           2
 S serine             10.9         29           2
 T threonine           8.7         23           2
 V valine              5.3         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            3.0          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Acr formation associated factor isoform 2 
C9orf11               0.964   Acr formation associated factor isoform 1 
CIAPIN1               0.014   cytokine induced apoptosis inhibitor 1 
NUP153                0.012   nucleoporin 153kDa 
CSRNP2                0.012   TGF-beta induced apoptosis protein 12 
MAGEC1                0.008   melanoma antigen family C, 1 
BAT2D1                0.008   HBxAg transactivated protein 2 
EID3                  0.008   EP300 interacting inhibitor of differentiation 3 [Ho...
WBP4                  0.008   WW domain-containing binding protein 4 
PKHD1L1               0.008   fibrocystin L 
ZCCHC10               0.006   zinc finger, CCHC domain containing 10 
SIGLEC10              0.006   sialic acid binding Ig-like lectin 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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