Guide to the Human Genome
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Name: SMAP2 Sequence: fasta or formatted (429aa) NCBI GI: 23943872
Description:

small ArfGAP2

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         36           2
 C cysteine            1.4          6           1
 D aspartate           4.0         17           2
 E glutamate           4.4         19           2
 F phenylalanine       2.3         10           1
 G glycine             8.6         37           2
 H histidine           0.5          2           1
 I isoleucine          3.0         13           1
 K lysine              7.0         30           3
 L leucine             6.1         26           3
 M methionine          7.9         34           2
 N asparagine          4.7         20           1
 P proline             8.6         37           3
 Q glutamine           7.2         31           2
 R arginine            3.3         14           2
 S serine              8.4         36           3
 T threonine           4.0         17           2
 V valine              5.8         25           2
 W tryptophan          1.4          6           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   small ArfGAP2 
SMAP1                 0.404   stromal membrane-associated GTPase-activating protei...
SMAP1                 0.397   stromal membrane-associated GTPase-activating prote...
ACAP3                 0.088   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ACAP1                 0.088   centaurin beta1 
ACAP2                 0.088   centaurin, beta 2 
AGAP1                 0.085   centaurin, gamma 2 isoform 2 
AGAP1                 0.085   centaurin, gamma 2 isoform 1 
AGAP3                 0.082   centaurin, gamma 3 isoform a 
ADAP1                 0.082   centaurin, alpha 1 
ADAP2                 0.081   centaurin-alpha 2 protein 
AGAP11                0.078   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP2                 0.077   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.077   centaurin, gamma 1 isoform PIKE-S 
ASAP1                 0.075   development and differentiation enhancing factor 1 [...
AGAP9                 0.074   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.074   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP4                 0.074   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.074   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP6                 0.073   centaurin, gamma-like family, member 3 
AGAP5                 0.072   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP8                 0.072   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ARFGAP2               0.071   ADP-ribosylation factor GTPase activating protein 2 ...
ARAP1                 0.067   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP1                 0.067   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARFGAP3               0.066   ADP-ribosylation factor GTPase activating protein 3...
ARFGAP3               0.064   ADP-ribosylation factor GTPase activating protein 3...
ARAP3                 0.061   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARFGAP1               0.060   ADP-ribosylation factor GTPase activating protein 1 ...
ARFGAP1               0.060   ADP-ribosylation factor GTPase activating protein 1 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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