Guide to the Human Genome
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Name: ARFGAP3 Sequence: fasta or formatted (516aa) NCBI GI: 214829673
Description:

ADP-ribosylation factor GTPase activating protein 3 isoform 1

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [472aa] ADP-ribosylation factor GTPase activating protein 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         37           2
 C cysteine            1.7          9           1
 D aspartate           6.6         34           2
 E glutamate           6.4         33           2
 F phenylalanine       3.7         19           2
 G glycine             5.6         29           2
 H histidine           1.4          7           1
 I isoleucine          3.7         19           2
 K lysine              8.3         43           3
 L leucine             6.2         32           1
 M methionine          1.9         10           1
 N asparagine          4.3         22           2
 P proline             4.7         24           3
 Q glutamine           4.5         23           1
 R arginine            4.7         24           2
 S serine             14.3         74           4
 T threonine           5.2         27           2
 V valine              5.6         29           2
 W tryptophan          1.4          7           1
 Y tyrosine            2.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor GTPase activating protein 3... 
ARFGAP3               0.890   ADP-ribosylation factor GTPase activating protein 3...
ARFGAP2               0.497   ADP-ribosylation factor GTPase activating protein 2 ...
ARFGAP1               0.094   ADP-ribosylation factor GTPase activating protein 1 i...
ARFGAP1               0.089   ADP-ribosylation factor GTPase activating protein 1 ...
SMAP2                 0.056   small ArfGAP2 
SMAP1                 0.055   stromal membrane-associated GTPase-activating prote...
SMAP1                 0.055   stromal membrane-associated GTPase-activating protei...
ACAP3                 0.054   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ACAP2                 0.053   centaurin, beta 2 
AGAP3                 0.051   centaurin, gamma 3 isoform a 
AGAP2                 0.049   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.049   centaurin, gamma 1 isoform PIKE-S 
ASAP1                 0.048   development and differentiation enhancing factor 1 [...
AGAP1                 0.048   centaurin, gamma 2 isoform 2 
AGAP1                 0.048   centaurin, gamma 2 isoform 1 
AGAP11                0.045   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP4                 0.044   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.044   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.044   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.044   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP6                 0.044   centaurin, gamma-like family, member 3 
ACAP1                 0.043   centaurin beta1 
AGAP8                 0.042   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP5                 0.040   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ADAP1                 0.040   centaurin, alpha 1 
ASAP2                 0.039   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.039   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
ARAP3                 0.037   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ASAP3                 0.036   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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