Guide to the Human Genome
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Name: ARFGAP3 Sequence: fasta or formatted (472aa) NCBI GI: 214829714
Description:

ADP-ribosylation factor GTPase activating protein 3 isoform 2

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [516aa] ADP-ribosylation factor GTPase activating protein 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         32           2
 C cysteine            1.7          8           1
 D aspartate           6.8         32           2
 E glutamate           6.8         32           2
 F phenylalanine       3.6         17           2
 G glycine             5.7         27           2
 H histidine           0.8          4           1
 I isoleucine          3.8         18           2
 K lysine              8.3         39           3
 L leucine             6.4         30           1
 M methionine          2.1         10           1
 N asparagine          4.0         19           2
 P proline             5.1         24           3
 Q glutamine           4.2         20           1
 R arginine            4.4         21           2
 S serine             14.4         68           4
 T threonine           4.9         23           2
 V valine              6.1         29           2
 W tryptophan          1.5          7           1
 Y tyrosine            2.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor GTPase activating protein 3... 
ARFGAP3               0.977   ADP-ribosylation factor GTPase activating protein 3...
ARFGAP2               0.451   ADP-ribosylation factor GTPase activating protein 2 ...
ARFGAP1               0.075   ADP-ribosylation factor GTPase activating protein 1 i...
ARFGAP1               0.075   ADP-ribosylation factor GTPase activating protein 1 ...
SMAP1                 0.061   stromal membrane-associated GTPase-activating prote...
SMAP1                 0.061   stromal membrane-associated GTPase-activating protei...
SMAP2                 0.059   small ArfGAP2 
ACAP3                 0.057   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ACAP2                 0.057   centaurin, beta 2 
AGAP3                 0.053   centaurin, gamma 3 isoform a 
AGAP2                 0.053   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.053   centaurin, gamma 1 isoform PIKE-S 
ASAP1                 0.053   development and differentiation enhancing factor 1 [...
AGAP1                 0.052   centaurin, gamma 2 isoform 2 
AGAP1                 0.052   centaurin, gamma 2 isoform 1 
AGAP11                0.048   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP4                 0.048   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP6                 0.048   centaurin, gamma-like family, member 3 
AGAP7                 0.048   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.046   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.046   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
ACAP1                 0.046   centaurin beta1 
AGAP8                 0.046   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP5                 0.044   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ASAP2                 0.043   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.043   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
ADAP1                 0.043   centaurin, alpha 1 
ASAP3                 0.040   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.040   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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