Guide to the Human Genome
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Name: AGAP11 Sequence: fasta or formatted (550aa) NCBI GI: 148806877
Description:

ankyrin repeat and GTPase domain Arf GTPase activating protein 11

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         34           1
 C cysteine            3.1         17           1
 D aspartate           4.5         25           2
 E glutamate           6.4         35           5
 F phenylalanine       1.5          8           1
 G glycine             6.2         34           3
 H histidine           3.1         17           3
 I isoleucine          5.6         31           2
 K lysine              7.1         39           3
 L leucine            10.4         57           3
 M methionine          2.2         12           1
 N asparagine          4.2         23           2
 P proline             4.0         22           2
 Q glutamine           3.8         21           1
 R arginine            4.2         23           1
 S serine             12.7         70           3
 T threonine           7.1         39           2
 V valine              3.8         21           2
 W tryptophan          1.8         10           1
 Y tyrosine            2.2         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and GTPase domain Arf GTPase activat... 
AGAP5                 0.883   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP4                 0.878   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP8                 0.877   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.870   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP6                 0.869   centaurin, gamma-like family, member 3 
AGAP9                 0.862   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.860   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP1                 0.762   centaurin, gamma 2 isoform 2 
AGAP1                 0.739   centaurin, gamma 2 isoform 1 
AGAP3                 0.522   centaurin, gamma 3 isoform a 
AGAP2                 0.417   centaurin, gamma 1 isoform PIKE-S 
AGAP2                 0.406   centaurin, gamma 1 isoform PIKE-L 
LOC100294038          0.292   PREDICTED: similar to centaurin, gamma-like family,...
ACAP3                 0.113   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ACAP2                 0.099   centaurin, beta 2 
ACAP1                 0.097   centaurin beta1 
ASAP1                 0.094   development and differentiation enhancing factor 1 [...
GIT2                  0.087   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.087   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.087   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.087   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.087   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.087   G protein-coupled receptor kinase interacting ArfGA...
ASAP3                 0.087   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.087   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
GIT1                  0.086   G protein-coupled receptor kinase interactor 1 isof...
GIT1                  0.086   G protein-coupled receptor kinase interactor 1 isofo...
ASAP2                 0.080   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.080   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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