Guide to the Human Genome
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Name: ADAP1 Sequence: fasta or formatted (374aa) NCBI GI: 6806913
Description:

centaurin, alpha 1

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         33           2
 C cysteine            1.6          6           1
 D aspartate           5.3         20           2
 E glutamate           7.5         28           2
 F phenylalanine       6.4         24           1
 G glycine             6.1         23           1
 H histidine           3.5         13           2
 I isoleucine          3.5         13           1
 K lysine              7.0         26           1
 L leucine             6.7         25           2
 M methionine          1.9          7           1
 N asparagine          2.9         11           1
 P proline             6.1         23           2
 Q glutamine           4.3         16           1
 R arginine            8.3         31           3
 S serine              4.8         18           1
 T threonine           3.7         14           1
 V valine              5.1         19           1
 W tryptophan          2.1          8           1
 Y tyrosine            4.3         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centaurin, alpha 1 
ADAP2                 0.577   centaurin-alpha 2 protein 
AGAP3                 0.095   centaurin, gamma 3 isoform a 
ACAP1                 0.093   centaurin beta1 
SMAP1                 0.093   stromal membrane-associated GTPase-activating prote...
SMAP1                 0.093   stromal membrane-associated GTPase-activating protei...
ACAP3                 0.092   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
SMAP2                 0.092   small ArfGAP2 
AGAP2                 0.091   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.091   centaurin, gamma 1 isoform PIKE-S 
ACAP2                 0.088   centaurin, beta 2 
AGAP7                 0.084   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP4                 0.084   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP1                 0.084   centaurin, gamma 2 isoform 2 
AGAP1                 0.084   centaurin, gamma 2 isoform 1 
AGAP6                 0.081   centaurin, gamma-like family, member 3 
ARAP1                 0.081   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP1                 0.081   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
AGAP8                 0.081   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP11                0.080   ankyrin repeat and GTPase domain Arf GTPase activat...
ASAP1                 0.079   development and differentiation enhancing factor 1 [...
AGAP9                 0.078   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.078   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP5                 0.078   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ASAP3                 0.071   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.071   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
ASAP2                 0.059   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.059   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
ARFGAP1               0.058   ADP-ribosylation factor GTPase activating protein 1 ...
ARFGAP1               0.058   ADP-ribosylation factor GTPase activating protein 1 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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