Guide to the Human Genome
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Name: ARFGAP1 Sequence: fasta or formatted (414aa) NCBI GI: 28416436
Description:

ADP-ribosylation factor GTPase activating protein 1 isoform b

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [406aa] ADP-ribosylation factor GTPase activating protein 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         29           3
 C cysteine            1.4          6           1
 D aspartate           6.0         25           2
 E glutamate           7.0         29           1
 F phenylalanine       4.6         19           2
 G glycine             8.9         37           2
 H histidine           1.7          7           1
 I isoleucine          1.2          5           1
 K lysine              6.5         27           2
 L leucine             5.1         21           1
 M methionine          1.2          5           1
 N asparagine          5.1         21           2
 P proline             5.3         22           3
 Q glutamine           5.1         21           2
 R arginine            4.6         19           2
 S serine             12.8         53           2
 T threonine           5.1         21           2
 V valine              5.8         24           2
 W tryptophan          3.9         16           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor GTPase activating protein 1 ... 
ARFGAP1               0.954   ADP-ribosylation factor GTPase activating protein 1 i...
ARFGAP3               0.107   ADP-ribosylation factor GTPase activating protein 3...
ARFGAP2               0.097   ADP-ribosylation factor GTPase activating protein 2 ...
ARFGAP3               0.082   ADP-ribosylation factor GTPase activating protein 3...
ASAP2                 0.063   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.063   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
SMAP1                 0.062   stromal membrane-associated GTPase-activating protei...
ACAP3                 0.061   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
SMAP2                 0.061   small ArfGAP2 
ASAP1                 0.058   development and differentiation enhancing factor 1 [...
SMAP1                 0.058   stromal membrane-associated GTPase-activating prote...
ACAP2                 0.058   centaurin, beta 2 
ACAP1                 0.055   centaurin beta1 
AGAP3                 0.055   centaurin, gamma 3 isoform a 
AGAP2                 0.053   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.053   centaurin, gamma 1 isoform PIKE-S 
ASAP3                 0.053   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.053   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
ADAP1                 0.052   centaurin, alpha 1 
AGAP1                 0.050   centaurin, gamma 2 isoform 2 
AGAP1                 0.050   centaurin, gamma 2 isoform 1 
AGFG1                 0.048   HIV-1 Rev binding protein isoform 4 
AGAP6                 0.048   centaurin, gamma-like family, member 3 
AGAP11                0.046   ankyrin repeat and GTPase domain Arf GTPase activat...
AGFG1                 0.045   HIV-1 Rev binding protein isoform 3 
AGFG1                 0.045   HIV-1 Rev binding protein isoform 1 
AGFG1                 0.045   HIV-1 Rev binding protein isoform 2 
AGAP4                 0.045   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.045   ArfGAP with GTPase domain, ankyrin repeat and PH do...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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