Guide to the Human Genome
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Name: AGAP2 Sequence: fasta or formatted (836aa) NCBI GI: 7661962
Description:

centaurin, gamma 1 isoform PIKE-S

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [1192aa] centaurin, gamma 1 isoform PIKE-L
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         92           3
 C cysteine            1.6         13           2
 D aspartate           4.7         39           2
 E glutamate           6.0         50           3
 F phenylalanine       2.0         17           1
 G glycine             6.5         54           2
 H histidine           2.5         21           1
 I isoleucine          3.3         28           1
 K lysine              4.2         35           3
 L leucine            10.6         89           4
 M methionine          1.0          8           1
 N asparagine          2.5         21           1
 P proline             5.6         47           3
 Q glutamine           4.8         40           3
 R arginine            7.9         66           3
 S serine             11.6         97           3
 T threonine           5.6         47           2
 V valine              5.9         49           2
 W tryptophan          1.3         11           1
 Y tyrosine            1.4         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centaurin, gamma 1 isoform PIKE-S 
AGAP2                 0.932   centaurin, gamma 1 isoform PIKE-L 
AGAP1                 0.513   centaurin, gamma 2 isoform 1 
AGAP1                 0.512   centaurin, gamma 2 isoform 2 
AGAP3                 0.499   centaurin, gamma 3 isoform a 
AGAP11                0.280   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP8                 0.274   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP6                 0.274   centaurin, gamma-like family, member 3 
AGAP4                 0.274   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.273   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP5                 0.272   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.262   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.262   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP3                 0.182   centaurin, gamma 3 isoform b 
LOC100294038          0.101   PREDICTED: similar to centaurin, gamma-like family,...
ACAP3                 0.071   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ASAP3                 0.064   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.064   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
ACAP2                 0.064   centaurin, beta 2 
GIT2                  0.064   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.064   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.064   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.064   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.064   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.064   G protein-coupled receptor kinase interacting ArfGA...
GIT1                  0.061   G protein-coupled receptor kinase interactor 1 isof...
GIT1                  0.061   G protein-coupled receptor kinase interactor 1 isofo...
ASAP1                 0.057   development and differentiation enhancing factor 1 [...
ACAP1                 0.056   centaurin beta1 
ASAP2                 0.053   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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