Guide to the Human Genome
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Name: ACAP1 Sequence: fasta or formatted (740aa) NCBI GI: 7661880
Description:

centaurin beta1

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         74           2
 C cysteine            2.2         16           2
 D aspartate           4.7         35           2
 E glutamate           8.0         59           2
 F phenylalanine       3.0         22           1
 G glycine             8.0         59           2
 H histidine           3.1         23           2
 I isoleucine          3.1         23           2
 K lysine              4.6         34           2
 L leucine            12.0         89           2
 M methionine          1.8         13           2
 N asparagine          2.4         18           1
 P proline             5.1         38           2
 Q glutamine           4.9         36           3
 R arginine            8.2         61           3
 S serine              7.0         52           2
 T threonine           3.9         29           1
 V valine              5.7         42           3
 W tryptophan          1.1          8           1
 Y tyrosine            1.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centaurin beta1 
ACAP2                 0.489   centaurin, beta 2 
ACAP3                 0.399   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ASAP2                 0.105   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.105   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
ASAP3                 0.102   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
ASAP3                 0.100   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP1                 0.096   development and differentiation enhancing factor 1 [...
AGAP3                 0.085   centaurin, gamma 3 isoform a 
AGAP4                 0.073   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP11                0.072   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP6                 0.072   centaurin, gamma-like family, member 3 
AGAP1                 0.072   centaurin, gamma 2 isoform 2 
AGAP1                 0.072   centaurin, gamma 2 isoform 1 
AGAP7                 0.072   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.069   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.069   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP8                 0.069   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP5                 0.069   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP2                 0.063   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.063   centaurin, gamma 1 isoform PIKE-S 
SMAP2                 0.052   small ArfGAP2 
ADAP1                 0.049   centaurin, alpha 1 
ARHGAP26              0.047   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.047   GTPase regulator associated with the focal adhesion k...
SMAP1                 0.047   stromal membrane-associated GTPase-activating protei...
ARAP2                 0.045   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
SMAP1                 0.045   stromal membrane-associated GTPase-activating prote...
GIT2                  0.043   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.043   G protein-coupled receptor kinase interacting ArfGAP...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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