Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ARFGAP2 Sequence: fasta or formatted (521aa) NCBI GI: 31543983
Description:

ADP-ribosylation factor GTPase activating protein 2

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         56           3
 C cysteine            1.2          6           1
 D aspartate           5.0         26           2
 E glutamate           7.3         38           2
 F phenylalanine       3.6         19           2
 G glycine             7.5         39           2
 H histidine           1.7          9           1
 I isoleucine          3.3         17           2
 K lysine              6.9         36           3
 L leucine             6.9         36           2
 M methionine          2.5         13           1
 N asparagine          3.6         19           1
 P proline             4.2         22           2
 Q glutamine           5.8         30           2
 R arginine            5.8         30           2
 S serine             12.1         63           3
 T threonine           4.2         22           1
 V valine              4.8         25           1
 W tryptophan          1.3          7           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor GTPase activating protein 2 ... 
ARFGAP3               0.498   ADP-ribosylation factor GTPase activating protein 3...
ARFGAP3               0.412   ADP-ribosylation factor GTPase activating protein 3...
ARFGAP1               0.082   ADP-ribosylation factor GTPase activating protein 1 ...
ARFGAP1               0.080   ADP-ribosylation factor GTPase activating protein 1 i...
SMAP1                 0.062   stromal membrane-associated GTPase-activating protei...
SMAP2                 0.060   small ArfGAP2 
SMAP1                 0.057   stromal membrane-associated GTPase-activating prote...
ACAP3                 0.053   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ACAP2                 0.053   centaurin, beta 2 
AGAP3                 0.050   centaurin, gamma 3 isoform a 
AGAP2                 0.048   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.048   centaurin, gamma 1 isoform PIKE-S 
AGAP1                 0.047   centaurin, gamma 2 isoform 2 
AGAP1                 0.047   centaurin, gamma 2 isoform 1 
ASAP1                 0.045   development and differentiation enhancing factor 1 [...
AGAP6                 0.045   centaurin, gamma-like family, member 3 
AGAP4                 0.044   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP11                0.044   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP7                 0.044   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ACAP1                 0.043   centaurin beta1 
AGAP9                 0.042   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.042   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP8                 0.042   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ADAP1                 0.042   centaurin, alpha 1 
AGAP5                 0.039   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ASAP3                 0.039   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.039   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
ASAP2                 0.038   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.038   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press