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Name: ARAP1 Sequence: fasta or formatted (1205aa) NCBI GI: 206597513
Description:

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform a

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [1133aa] ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform d
alt prot [1450aa] ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         94           3
 C cysteine            2.1         25           2
 D aspartate           4.8         58           2
 E glutamate           9.2        111           3
 F phenylalanine       3.7         44           1
 G glycine             6.7         81           2
 H histidine           2.6         31           1
 I isoleucine          3.4         41           1
 K lysine              4.8         58           3
 L leucine            10.5        126           2
 M methionine          1.7         20           2
 N asparagine          2.5         30           2
 P proline             5.1         61           3
 Q glutamine           4.2         51           2
 R arginine            7.6         91           3
 S serine              7.1         85           3
 T threonine           4.8         58           3
 V valine              7.1         85           3
 W tryptophan          1.7         21           1
 Y tyrosine            2.8         34           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ArfGAP with RhoGAP domain, ankyrin repeat and PH do... 
ARAP1                 1.000   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARAP1                 0.641   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP2                 0.341   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARAP3                 0.289   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
AGAP2                 0.033   centaurin, gamma 1 isoform PIKE-S 
ACAP3                 0.032   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
AGAP2                 0.032   centaurin, gamma 1 isoform PIKE-L 
ARHGAP23              0.031   Rho GTPase activating protein 23 
GRLF1                 0.031   glucocorticoid receptor DNA binding factor 1 
MYO9B                 0.030   myosin IXB isoform 2 
MYO9B                 0.030   myosin IXB isoform 1 
MYO9A                 0.030   myosin IXA 
ARHGAP27              0.029   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.029   Rho GTPase activating protein 27 isoform a 
ASAP2                 0.029   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.029   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
ASAP1                 0.029   development and differentiation enhancing factor 1 [...
ACAP2                 0.029   centaurin, beta 2 
ARHGAP22              0.029   Rho GTPase activating protein 2 
AGAP3                 0.028   centaurin, gamma 3 isoform a 
ARHGAP21              0.028   Rho GTPase activating protein 21 
ARHGAP15              0.028   ARHGAP15 
HMHA1                 0.027   minor histocompatibility antigen HA-1 
ARHGAP5               0.027   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.027   Rho GTPase activating protein 5 isoform b 
ASAP3                 0.027   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.027   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
FAM13A                0.027   family with sequence similarity 13, member A1 isofor...
ARHGAP26              0.026   GTPase regulator associated with the focal adhesion...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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