Guide to the Human Genome
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Name: FIG4 Sequence: fasta or formatted (907aa) NCBI GI: 7662034
Description:

Sac domain-containing inositol phosphatase 3

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         44           3
 C cysteine            1.5         14           1
 D aspartate           6.2         56           2
 E glutamate           6.3         57           3
 F phenylalanine       4.4         40           2
 G glycine             5.5         50           2
 H histidine           2.4         22           2
 I isoleucine          5.8         53           3
 K lysine              5.6         51           2
 L leucine             8.8         80           2
 M methionine          2.4         22           2
 N asparagine          3.6         33           2
 P proline             5.0         45           4
 Q glutamine           4.5         41           2
 R arginine            6.2         56           2
 S serine              8.4         76           4
 T threonine           5.6         51           1
 V valine              6.9         63           2
 W tryptophan          1.0          9           2
 Y tyrosine            4.9         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Sac domain-containing inositol phosphatase 3 
SACM1L                0.083   suppressor of actin 1 
SYNJ1                 0.059   synaptojanin 1 isoform d 
SYNJ1                 0.058   synaptojanin 1 isoform c 
SYNJ1                 0.058   synaptojanin 1 isoform a 
SYNJ1                 0.058   synaptojanin 1 isoform b 
INPP5F                0.057   inositol polyphosphate-5-phosphatase F 
SYNJ2                 0.044   synaptojanin 2 
MINK1                 0.009   misshapen/NIK-related kinase isoform 4 
MINK1                 0.009   misshapen/NIK-related kinase isoform 2 
MINK1                 0.009   misshapen/NIK-related kinase isoform 3 
MINK1                 0.009   misshapen/NIK-related kinase isoform 1 
C5orf42               0.007   hypothetical protein LOC65250 
FBRSL1                0.006   fibrosin-like 1 
PRRG3                 0.006   proline rich Gla (G-carboxyglutamic acid) 3 (transme...
TPR                   0.005   nuclear pore complex-associated protein TPR 
SNAI2                 0.004   snail 2 
ABCF1                 0.004   ATP-binding cassette, sub-family F, member 1 isoform...
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform a 
LOC100288573          0.004   PREDICTED: hypothetical protein XP_002343799 
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.004   GRB10 interacting GYF protein 2 isoform b 
LPIN2                 0.004   lipin 2 
ZBTB4                 0.004   zinc finger and BTB domain containing 4 
ZBTB4                 0.004   zinc finger and BTB domain containing 4 
CBX6                  0.004   chromobox homolog 6 
ANK3                  0.004   ankyrin 3 isoform 2 
ANK3                  0.004   ankyrin 3 isoform 1 
DVL1                  0.004   dishevelled 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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