CAPRIN1 28081

Name: CAPRIN1	Sequence: fasta or formatted (694aa)		NCBI GI: 42734503
Description: membrane component chromosome 11 surface marker 1 isoform 2		Referenced in: Complement
Other entries for this name: alt prot [709aa] membrane component chromosome 11 surface marker 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 49 3 C cysteine 0.4 3 1 D aspartate 4.2 29 2 E glutamate 8.2 57 4 F phenylalanine 2.6 18 1 G glycine 6.6 46 2 H histidine 2.0 14 1 I isoleucine 2.0 14 1 K lysine 4.0 28 3 L leucine 6.8 47 2 M methionine 2.3 16 1 N asparagine 5.0 35 2 P proline 7.9 55 4 Q glutamine 11.1 77 3 R arginine 4.5 31 2 S serine 9.4 65 3 T threonine 5.6 39 2 V valine 6.2 43 2 W tryptophan 0.6 4 2 Y tyrosine 3.5 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 membrane component chromosome 11 surface marker 1 is... CAPRIN1 0.990 membrane component chromosome 11 surface marker 1 is... CAPRIN2 0.144 C1q domain containing 1 isoform 1 CAPRIN2 0.144 C1q domain containing 1 isoform 2 CAPRIN2 0.112 C1q domain containing 1 isoform 3 WNK1 0.017 WNK lysine deficient protein kinase 1 MLL3 0.017 myeloid/lymphoid or mixed-lineage leukemia 3 BRD4 0.016 bromodomain-containing protein 4 isoform long MYH9 0.016 myosin, heavy polypeptide 9, non-muscle PCLO 0.015 piccolo isoform 2 PCLO 0.015 piccolo isoform 1 RERE 0.015 atrophin-1 like protein isoform b RERE 0.015 atrophin-1 like protein isoform a RERE 0.015 atrophin-1 like protein isoform a ILF3 0.014 interleukin enhancer binding factor 3 isoform d [Ho... ILF3 0.014 interleukin enhancer binding factor 3 isoform a [Hom... YLPM1 0.014 YLP motif containing 1 SS18 0.013 synovial sarcoma translocation, chromosome 18 isofor... RP1L1 0.013 retinitis pigmentosa 1-like 1 KTN1 0.013 kinectin 1 isoform a KTN1 0.013 kinectin 1 isoform a RABGAP1 0.013 RAB GTPase activating protein 1 ATXN2L 0.013 ataxin 2 related protein isoform A SS18 0.012 synovial sarcoma translocation, chromosome 18 isofor... RTN4 0.012 reticulon 4 isoform A CREBBP 0.012 CREB binding protein isoform b CREBBP 0.012 CREB binding protein isoform a HNRNPU 0.012 heterogeneous nuclear ribonucleoprotein U isoform b ... HNRNPU 0.012 heterogeneous nuclear ribonucleoprotein U isoform a ... AAK1 0.012 AP2 associated kinase 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.