Guide to the Human Genome
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Name: FAM26D Sequence: fasta or formatted (128aa) NCBI GI: 23308563
Description:

hypothetical protein LOC221301

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          6           2
 C cysteine            5.5          7           2
 D aspartate           6.2          8           2
 E glutamate           7.0          9           2
 F phenylalanine       3.1          4           1
 G glycine             5.5          7           1
 H histidine           4.7          6           1
 I isoleucine          7.0          9           1
 K lysine              4.7          6           2
 L leucine            12.5         16           2
 M methionine          3.1          4           2
 N asparagine          2.3          3           1
 P proline             3.9          5           1
 Q glutamine           4.7          6           1
 R arginine            5.5          7           1
 S serine              7.8         10           1
 T threonine           3.9          5           1
 V valine              3.9          5           1
 W tryptophan          2.3          3           1
 Y tyrosine            1.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC221301 
CALHM2                0.171   calcium homeostasis modulator 2 
FAM26F                0.134   hypothetical protein LOC441168 
FAM26E                0.085   hypothetical protein LOC254228 
CALHM1                0.073   calcium homeostasis modulator 1 
CALHM3                0.073   calcium homeostasis modulator 3 
KRTAP10-12            0.012   keratin associated protein 10-12 
HEATR5B               0.008   HEAT repeat containing 5B 
ANKRD50               0.008   ankyrin repeat domain 50 
CCDC12                0.008   coiled-coil domain containing 12 
DLGAP5                0.008   discs large homolog 7 isoform b 
DLGAP5                0.008   discs large homolog 7 isoform a 
KRTAP4-2              0.004   keratin associated protein 4-2 
KRTAP5-3              0.004   keratin associated protein 5-3 
KRTAP4-3              0.004   keratin associated protein 4-3 
DISC1                 0.004   disrupted in schizophrenia 1 isoform L 
KRTAP4-8              0.004   PREDICTED: keratin associated protein 4-8 isoform 3...
KRTAP4-8              0.004   PREDICTED: keratin associated protein 4-8 isoform 2...
KRTAP4-8              0.004   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.004   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.004   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.004   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.004   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.004   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.004   keratin associated protein 4.8 
PRKX                  0.004   protein kinase, X-linked 
KRTAP5-7              0.004   keratin associated protein 5-7 
KRTAP5-9              0.004   keratin associated protein 5-9 
KRTAP5-4              0.004   keratin associated protein 5-4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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