Guide to the Human Genome
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Name: FAM26F Sequence: fasta or formatted (315aa) NCBI GI: 62988336
Description:

hypothetical protein LOC441168

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         35           4
 C cysteine            3.8         12           2
 D aspartate           1.9          6           1
 E glutamate           4.8         15           1
 F phenylalanine       4.4         14           2
 G glycine             6.0         19           2
 H histidine           2.2          7           2
 I isoleucine          4.8         15           3
 K lysine              5.4         17           1
 L leucine            14.0         44           2
 M methionine          1.0          3           1
 N asparagine          2.5          8           1
 P proline             3.8         12           1
 Q glutamine           4.4         14           2
 R arginine            3.8         12           1
 S serine              8.9         28           2
 T threonine           5.4         17           1
 V valine              6.7         21           2
 W tryptophan          1.9          6           1
 Y tyrosine            3.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC441168 
FAM26E                0.340   hypothetical protein LOC254228 
CALHM2                0.188   calcium homeostasis modulator 2 
CALHM1                0.142   calcium homeostasis modulator 1 
CALHM3                0.127   calcium homeostasis modulator 3 
FAM26D                0.054   hypothetical protein LOC221301 
TMEM198               0.018   transmembrane protein 198 
FLJ37512              0.010   PREDICTED: novel protein similar to contactin assoc...
CNTNAP3               0.008   cell recognition molecule CASPR3 
CLTA                  0.008   clathrin, light polypeptide A isoform a 
SLC35E4               0.008   solute carrier family 35, member E4 
C20orf123             0.008   PREDICTED: chromosome 20 open reading frame 123 [Ho...
C20orf123             0.008   PREDICTED: hypothetical protein LOC128506 
C20orf123             0.008   PREDICTED: hypothetical protein LOC128506 
C20orf123             0.008   hypothetical protein LOC128506 
CEACAM19              0.008   carcinoembryonic antigen-related cell adhesion mole...
CEACAM19              0.008   carcinoembryonic antigen-related cell adhesion molec...
SLCO4A1               0.007   solute carrier organic anion transporter family memb...
LOC389722             0.007   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.007   PREDICTED: hypothetical protein LOC389722 isoform 1...
ABCC5                 0.007   ATP-binding cassette, sub-family C, member 5 isoform...
QPRT                  0.005   quinolinate phosphoribosyltransferase 
ITGA9                 0.005   integrin, alpha 9 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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