Search of human proteins with 23308505

Search of human proteins with 23308505

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23308505 hypothetical protein LOC127428 [Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23308505 hypothetical protein LOC127428 [Homo sapiens]             409   e-115
gi|239749424 PREDICTED: hypothetical protein XP_002347041 [Homo ...    46   3e-05
gi|5803191 transcription elongation factor A 1 isoform 1 [Homo s...    46   3e-05
gi|208022641 elongin A [Homo sapiens]                                  44   7e-05
gi|4507385 transcription elongation factor A protein 2 isoform a...    44   1e-04
gi|41350335 transcription elongation factor A (SII), 3 [Homo sap...    41   6e-04
gi|38505156 transcription elongation factor A protein 2 isoform ...    41   6e-04
gi|45439355 transcription elongation factor A 1 isoform 2 [Homo ...    38   0.007
gi|154354990 ankyrin repeat domain 26 [Homo sapiens]                   35   0.035
gi|28558977 mediator complex subunit 26 [Homo sapiens]                 34   0.077
gi|71834863 Rho GTPase activating protein 5 isoform a [Homo sapi...    34   0.10 
gi|71834861 Rho GTPase activating protein 5 isoform b [Homo sapi...    34   0.10 
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo...    33   0.13 
gi|13376880 THUMP domain containing 2 [Homo sapiens]                   33   0.13 
gi|166295204 hypothetical protein LOC80127 [Homo sapiens]              33   0.13 
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo...    33   0.13 
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]     31   0.65 
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    31   0.65 
gi|88501740 TRIO and F-actin binding protein isoform 1 [Homo sap...    31   0.65 
gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens]     31   0.65 
gi|58530840 desmoplakin isoform I [Homo sapiens]                       31   0.85 
gi|42740907 clusterin isoform 2 [Homo sapiens]                         31   0.85 
gi|42716297 clusterin isoform 1 [Homo sapiens]                         31   0.85 
gi|6912464 latrophilin 2 precursor [Homo sapiens]                      31   0.85 
gi|133778961 testis expressed 15 [Homo sapiens]                        30   1.1  
gi|21687119 spermatogenesis associated 18 homolog [Homo sapiens]       30   1.5  
gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]      30   1.5  
gi|58761537 hypothetical protein LOC84437 [Homo sapiens]               30   1.5  
gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens]             30   1.9  
gi|4758010 clock [Homo sapiens]                                        30   1.9  

>gi|23308505 hypothetical protein LOC127428 [Homo sapiens]
          Length = 208

 Score =  409 bits (1051), Expect = e-115
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MDKFVIRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPDQTKENLV 60
           MDKFVIRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPDQTKENLV
Sbjct: 1   MDKFVIRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPDQTKENLV 60

Query: 61  EALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSI 120
           EALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSI
Sbjct: 61  EALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSI 120

Query: 121 EVRSDPKTESLRKNAQKLLSEALELKMDHLLVENIERETFHLCSRLINGPYRRTVRALVF 180
           EVRSDPKTESLRKNAQKLLSEALELKMDHLLVENIERETFHLCSRLINGPYRRTVRALVF
Sbjct: 121 EVRSDPKTESLRKNAQKLLSEALELKMDHLLVENIERETFHLCSRLINGPYRRTVRALVF 180

Query: 181 TLKHRAEIRAQVKSGSLPVGTFVQTHKK 208
           TLKHRAEIRAQVKSGSLPVGTFVQTHKK
Sbjct: 181 TLKHRAEIRAQVKSGSLPVGTFVQTHKK 208


>gi|239749424 PREDICTED: hypothetical protein XP_002347041 [Homo
           sapiens]
          Length = 287

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 56  KENLVEALQELK--KKIP-SREVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTFT 111
           K+N   AL  LK  K IP + E+L+STRIG +VN +RK S D EV SLA+ +   WK   
Sbjct: 4   KKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 63

Query: 112 EKHSNRPSI-EVRSDPKTES 130
           +  S    + E + +P   S
Sbjct: 64  DGPSTEKDLDEKKKEPAITS 83


>gi|5803191 transcription elongation factor A 1 isoform 1 [Homo
           sapiens]
          Length = 301

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 56  KENLVEALQELK--KKIP-SREVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTFT 111
           K+N   AL  LK  K IP + E+L+STRIG +VN +RK S D EV SLA+ +   WK   
Sbjct: 18  KKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77

Query: 112 EKHSNRPSI-EVRSDPKTES 130
           +  S    + E + +P   S
Sbjct: 78  DGPSTEKDLDEKKKEPAITS 97


>gi|208022641 elongin A [Homo sapiens]
          Length = 798

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 9   PRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPDQTKENLVEALQELKK 68
           PR +  P   +    V   A   +L+   VVE ++    +   PD  K  L++ L++L  
Sbjct: 9   PRTRREPSSGEEAAPVTAMAAESALQ---VVEKLQA--RLAANPDPKK--LLKYLKKLST 61

Query: 69  KIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKT 128
              + ++L  T +G TVN +RKH    V S AR++  +WK       N    E   D + 
Sbjct: 62  LPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNAEPDE--QDFEK 117

Query: 129 ESLRKNAQKLLSEALELKMDH 149
            + RK  +  L +  E++ D+
Sbjct: 118 SNSRKRPRDALQKEEEMEGDY 138


>gi|4507385 transcription elongation factor A protein 2 isoform a
           [Homo sapiens]
          Length = 299

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 40  EDIKRWKTMLE--LPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKH-SDSEV 96
           E+I R    L+  +  ++ E  ++ L+ELK    +  +L+STR+G +VN +RK  SD EV
Sbjct: 6   EEIARIARRLDKMVTKKSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEV 65

Query: 97  ASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLR 132
            +LA+ +   WK   +    +     R  P   S R
Sbjct: 66  IALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSR 101


>gi|41350335 transcription elongation factor A (SII), 3 [Homo
           sapiens]
          Length = 348

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 57  ENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKH-SDSEVASLAREVYTEWK 108
           E  ++ L++L     S ++L++TRIG  VN +RKH SD EV SLA+ +   WK
Sbjct: 24  EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWK 76


>gi|38505156 transcription elongation factor A protein 2 isoform b
           [Homo sapiens]
          Length = 272

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 60  VEALQELKKKIPSREVLKSTRIGHTVNKMRKH-SDSEVASLAREVYTEWKTFTEKHSNRP 118
           ++ L+ELK    +  +L+STR+G +VN +RK  SD EV +LA+ +   WK   +    + 
Sbjct: 1   MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 60

Query: 119 SIEVRSDPKTESLR 132
               R  P   S R
Sbjct: 61  RERGRGMPLPTSSR 74


>gi|45439355 transcription elongation factor A 1 isoform 2 [Homo
           sapiens]
          Length = 280

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 56  KENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTFTEKH 114
           ++ +V   +++ K +  +    STRIG +VN +RK S D EV SLA+ +   WK   +  
Sbjct: 2   EDEVVRFAKKMDKMVQKKNA--STRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGP 59

Query: 115 SNRPSI-EVRSDPKTES 130
           S    + E + +P   S
Sbjct: 60  STEKDLDEKKKEPAITS 76


>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
          Length = 1710

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 7    RTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPDQTKENLVEALQEL 66
            R  + +N   +++   +  +Q   ++LK+  + E        LE+  + + NL +  Q+L
Sbjct: 1206 RQYQYENEKAEREVVVRQLQQELADTLKKQSMSE------ASLEVTSRYRINLEDETQDL 1259

Query: 67   KKKIPS-REVLKSTRIGHT-----VNKMRKHS---DSEVASLAREVYTEWKTFTEKHSNR 117
            KKK+   R  L+  +  HT       KM+ H    + + A L   V  +     E   N 
Sbjct: 1260 KKKLGQIRNQLQEAQDRHTEAVRCAEKMQDHKQKLEKDNAKLKVTVKKQMDKIEELQKNL 1319

Query: 118  PSIEVRSDPKTESLRKNAQKLLSEALELKMDHLLVENIERE 158
             +  +  D K E L+K  +  L ++LE  +D  + +N+E E
Sbjct: 1320 LNANLSEDEK-EQLKKLME--LKQSLECNLDQEMKKNVELE 1357


>gi|28558977 mediator complex subunit 26 [Homo sapiens]
          Length = 600

 Score = 34.3 bits (77), Expect = 0.077
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 59  LVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTFTE 112
           ++E +  L+K   ++E L+ TR+G  +N +RK + + E+A  A+++   W+   E
Sbjct: 31  VLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85


>gi|71834863 Rho GTPase activating protein 5 isoform a [Homo
           sapiens]
          Length = 1502

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 9/126 (7%)

Query: 27  QATIESLKRVVVVEDIKRWKTMLELPDQTKENLVEALQELKKKIPSREVLKSTR--IGHT 84
           QA   + K ++VVE   R+   +E        +++  +   K IP  +  K+ R  +   
Sbjct: 213 QAFASNKKNLLVVETSARFNVNIETCFTALVQMLDKTRSKPKIIPYLDAYKTQRQLVVTA 272

Query: 85  VNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLRKNAQKLLSEALE 144
            +K  K     +    R+ +  WKT + K  N P  E   +   E  RK          +
Sbjct: 273 TDKFEK-----LVQTVRDYHATWKTVSNKLKNHPDYEEYIN--LEGTRKARNTFSKHIEQ 325

Query: 145 LKMDHL 150
           LK +H+
Sbjct: 326 LKQEHI 331


>gi|71834861 Rho GTPase activating protein 5 isoform b [Homo
           sapiens]
          Length = 1501

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 9/126 (7%)

Query: 27  QATIESLKRVVVVEDIKRWKTMLELPDQTKENLVEALQELKKKIPSREVLKSTR--IGHT 84
           QA   + K ++VVE   R+   +E        +++  +   K IP  +  K+ R  +   
Sbjct: 213 QAFASNKKNLLVVETSARFNVNIETCFTALVQMLDKTRSKPKIIPYLDAYKTQRQLVVTA 272

Query: 85  VNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLRKNAQKLLSEALE 144
            +K  K     +    R+ +  WKT + K  N P  E   +   E  RK          +
Sbjct: 273 TDKFEK-----LVQTVRDYHATWKTVSNKLKNHPDYEEYIN--LEGTRKARNTFSKHIEQ 325

Query: 145 LKMDHL 150
           LK +H+
Sbjct: 326 LKQEHI 331


>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
           sapiens]
          Length = 1483

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 34  KRVVVVEDIKRWKTMLELPDQTKENLVEALQELKKKIPSR-EVLKSTRIGHTVNKMRKHS 92
           KR  ++E  KRW +M E  +Q KE L +  +ELKKK+  + +  +   +   + K +++ 
Sbjct: 524 KRYELLEHKKRWASMSE--EQRKEYLKKKREELKKKLKEKAKERREKEMLERLEKQKRYE 581

Query: 93  DSEV 96
           D E+
Sbjct: 582 DQEL 585


>gi|13376880 THUMP domain containing 2 [Homo sapiens]
          Length = 473

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 42  IKRWKTMLELPDQTKENLVEA-LQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLA 100
           I  WK +LEL D  KE L +    +LK+K+   E++        + K+ ++ D ++    
Sbjct: 79  ISIWKNLLEL-DAKKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQI 137

Query: 101 REVYTEWKTFTEKHSNRPSIEVRSD 125
           +E   E + FT K       E ++D
Sbjct: 138 KEETLEQRDFTTKSEKFQEEEFQND 162


>gi|166295204 hypothetical protein LOC80127 [Homo sapiens]
          Length = 529

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 28/141 (19%), Positives = 60/141 (42%), Gaps = 10/141 (7%)

Query: 34  KRVVVVEDIKRWKTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSD 93
           K+  + +DI    + L+  DQ K+N++E L++   +   +   +  ++     +     +
Sbjct: 70  KQCKMEKDIMSVLSYLKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELE 129

Query: 94  SEVASLARE---VYTEWKTFTEKHSNRPSIEVRSDPKTESLRKNAQKLLSEALE------ 144
            +    A+E   ++TE K   +    +  +E   D   E+LR N +++  E L       
Sbjct: 130 GQFHQKAKEIGMIHTELKAVRQFQKRKIQVERELDDLKENLR-NTERIHQETLRRLESRF 188

Query: 145 LKMDHLLVENIERETFHLCSR 165
            +  H L +  E++   L  R
Sbjct: 189 FEEKHRLEQEAEKKIIMLAER 209


>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
           sapiens]
          Length = 805

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 25/138 (18%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 17  KKDSGGKVYKQATIESLKRVVV----VEDIKRWKTMLELPDQTKENLVEALQELKKKIPS 72
           +K+S     KQ  IE+L++ +     ++D++     L++ ++  +NL EAL + +KK+  
Sbjct: 495 QKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILEEKNKNLQEALIDTEKKL-- 552

Query: 73  REVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLR 132
            E+ K  +   T    +K  + E+ +  + +  + +   E     P ++ +         
Sbjct: 553 EEIKKQCQDKETQLICQKKKEKELVTTVQSLQQKVERCLEDGIRLPMLDAKQLQNENDNL 612

Query: 133 KNAQKLLSEALELKMDHL 150
           +   +  S+ ++ + D +
Sbjct: 613 RQQNETASKIIDSQQDEI 630


>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
          Length = 1979

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 40  EDIKRWKTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASL 99
           E+IK  + ++E  +Q+K  L+++LQE KK++      +  ++  T  ++    D E+ SL
Sbjct: 910 EEIKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFR-YQHEQMNATHTQLFLEKDEEIKSL 968

Query: 100 AREVYTEWKTFTEKHSNRPSIE 121
            + +    +  T+ H  R  I+
Sbjct: 969 QKTIE---QIKTQLHEERQDIQ 987


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
          Length = 2365

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 14/132 (10%)

Query: 28   ATIESLKRVVVVEDIKRWKTMLELPDQTKENL-----------VEALQELKKKIPSREVL 76
            A +ES  + V+ E  +  +  L+   Q KE L           +EA+++  ++  SRE+ 
Sbjct: 2116 AEMESSHQQVMEELQRHHERELQRLQQEKEWLLAEETAATASAIEAMKKAYQEELSRELS 2175

Query: 77   KSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLRK--- 133
            K+  +    + +RK   S+V +L RE+    + +++K     ++  +++ +  +LR+   
Sbjct: 2176 KTRSLQQGPDGLRKQHQSDVEALKRELQVLSEQYSQKCLEIGALMRQAEEREHTLRRCQQ 2235

Query: 134  NAQKLLSEALEL 145
              Q+LL    EL
Sbjct: 2236 EGQELLRHNQEL 2247


>gi|88501740 TRIO and F-actin binding protein isoform 1 [Homo
           sapiens]
          Length = 652

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 14/132 (10%)

Query: 28  ATIESLKRVVVVEDIKRWKTMLELPDQTKENL-----------VEALQELKKKIPSREVL 76
           A +ES  + V+ E  +  +  L+   Q KE L           +EA+++  ++  SRE+ 
Sbjct: 403 AEMESSHQQVMEELQRHHERELQRLQQEKEWLLAEETAATASAIEAMKKAYQEELSRELS 462

Query: 77  KSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLRK--- 133
           K+  +    + +RK   S+V +L RE+    + +++K     ++  +++ +  +LR+   
Sbjct: 463 KTRSLQQGPDGLRKQHQSDVEALKRELQVLSEQYSQKCLEIGALMRQAEEREHTLRRCQQ 522

Query: 134 NAQKLLSEALEL 145
             Q+LL    EL
Sbjct: 523 EGQELLRHNQEL 534


>gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens]
          Length = 745

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 12/69 (17%)

Query: 20  SGGKVYKQATIE-SLKRVVVVE-DIKRWKTM----------LELPDQTKENLVEALQELK 67
           S GK YK+  +E   KR V+ E +I  WK++          LEL  +    L E L  ++
Sbjct: 474 SKGKTYKRPPMELKTKRKVIKEMNISFWKSIEKEEEEKKAQLELSSKINNTLTECLNLIE 533

Query: 68  KKIPSREVL 76
             +PS E+L
Sbjct: 534 GGVPSNEIL 542


>gi|58530840 desmoplakin isoform I [Homo sapiens]
          Length = 2871

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 12   QNSPQKKDSGGKVY--KQATIESLKRVVVV--EDIKRWKTMLELPDQTKENLVEALQELK 67
            +N+ Q+K  G ++   KQ     LK+V+    ED  R K  LE   +T ++  + ++ LK
Sbjct: 1272 ENALQQKACGSEIMQKKQHLEIELKQVMQQRSEDNARHKQSLEEAAKTIQDKNKEIERLK 1331

Query: 68   KKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWK-TFTEKHSNRPSIEVRSDP 126
             +    E  +     + ++K+R + D E+ SL  +  TE   T T  H     + ++ + 
Sbjct: 1332 AEF-QEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEINITKTTIH----QLTMQKEE 1386

Query: 127  KTESLRKNAQKLLSEALELKMDHLLVENIERET 159
             T   R     L  E   L  +   ++N   +T
Sbjct: 1387 DTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQT 1419


>gi|42740907 clusterin isoform 2 [Homo sapiens]
          Length = 449

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 13 NSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPDQTKENLVEALQELKKKIPS 72
          N  Q+  + G  Y    I++      V  +K+ KT++E  ++ ++ L+  L+E KKK   
Sbjct: 29 NELQEMSNQGSKYVNKEIQN-----AVNGVKQIKTLIEKTNEERKTLLSNLEEAKKK--K 81

Query: 73 REVLKSTRIGHT 84
           + L  TR   T
Sbjct: 82 EDALNETRESET 93


>gi|42716297 clusterin isoform 1 [Homo sapiens]
          Length = 501

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 13  NSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPDQTKENLVEALQELKKKIPS 72
           N  Q+  + G  Y    I++      V  +K+ KT++E  ++ ++ L+  L+E KKK   
Sbjct: 81  NELQEMSNQGSKYVNKEIQN-----AVNGVKQIKTLIEKTNEERKTLLSNLEEAKKK--K 133

Query: 73  REVLKSTRIGHT 84
            + L  TR   T
Sbjct: 134 EDALNETRESET 145


>gi|6912464 latrophilin 2 precursor [Homo sapiens]
          Length = 1403

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 15  PQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELPD-QTKENLVEALQE 65
           P +KDS G+ Y +A ++++  ++  E ++ WK M       T   L++ L+E
Sbjct: 582 PSEKDSAGRSYNKAIVDTVDNLLRPEALESWKHMNSSEQAHTATMLLDTLEE 633


>gi|133778961 testis expressed 15 [Homo sapiens]
          Length = 2789

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 30/112 (26%)

Query: 66  LKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSI----- 120
           LKKK+   E L++T       KM+  +D E +S   E  T WK      +N   I     
Sbjct: 222 LKKKVSIDEYLQNT------GKMKNFADLEDSSKHEEKQTSWKEIDNDFTNETKISPIDN 275

Query: 121 ------EVRSDPKTESLRKNAQK-LLSEALEL------------KMDHLLVE 153
                 E +      S  K+  K L+++ LE+            ++DHL +E
Sbjct: 276 YIVLHQEYKESESHNSFGKSCDKILITQELEITKSSTSTIKDKDELDHLALE 327


>gi|21687119 spermatogenesis associated 18 homolog [Homo sapiens]
          Length = 538

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 53  DQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDS-EVASLAREVYTEWKTFT 111
           +Q +++LVE  + L++   +R  +        +N+++K   S +    AR   T+ ++  
Sbjct: 136 NQVQDDLVETEKNLEES-KNRSAISLLAAEEEINQLKKQLKSLQAQEDARHRNTDQRSSE 194

Query: 112 EKHSNRPSIEVRSDPKTESLRKNAQKLLSEAL 143
            + S   S+E R   +  SL++NA +  +EA+
Sbjct: 195 NRRSEPWSLEERKREQWNSLKQNADQQDTEAM 226


>gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]
          Length = 1164

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 94  SEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLRKNAQKLLSEALELKMDHLL 151
           SE+ +L R    +++  TE   N   +E RS    ESLR  A+  L+ AL  ++ H L
Sbjct: 879 SEIPALTRCAKVDFEQLTE---NLGQLERRSRAAEESLRSLAKHELAPALRARLTHFL 933


>gi|58761537 hypothetical protein LOC84437 [Homo sapiens]
          Length = 345

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 48  MLELPDQTKENL-VEALQELKKKIPSR-EVLKSTRIGHTVNKMRKHSDSEVASLAREVYT 105
           M +L  + K N  V+  Q L K+I  R EV+ S ++  T+N M++ +  E+A     V  
Sbjct: 1   MKQLKRKRKSNFSVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAV-G 59

Query: 106 EWKTFTEKHSNRPSIEVRSDPKTESLRKNAQKLLSEALEL---KMDHLLVENIERE 158
           E +  T     R  ++ R+  K + ++ N  KL+     L    +D  L E I+ +
Sbjct: 60  EGEQRTGTEVKRRYLDWRALMKRKRMKANI-KLVGSGFPLPSSDLDDSLTEEIDEK 114


>gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens]
          Length = 839

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 17/164 (10%)

Query: 18  KDSGGKVYKQ-ATIESLKRV-VVVEDIKRWKTMLELPDQTKENLVEALQELKKKIPSREV 75
           +D  G VY++  T E L ++  V+ED + W    +  DQ K+  V+ LQELKK     + 
Sbjct: 632 RDRLGTVYEKFITPEDLSKLSAVLEDTENW-LYEDGEDQPKQVYVDKLQELKK---YGQP 687

Query: 76  LKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTES----- 130
           ++   + H       +   +   L  +V   ++   E++ +    E+    K  S     
Sbjct: 688 IQMKYMEHEERPKALNDLGKKIQLVMKVIEAYRNKDERYDHLDPTEMEKVEKCISDAMSW 747

Query: 131 --LRKNAQKLLSEALE--LKMDHLLVENIERETFHLCSRLINGP 170
              + NAQ  LS   +  +K+  ++ ++ E + F  C+ +I  P
Sbjct: 748 LNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNF--CNPIIYKP 789


>gi|4758010 clock [Homo sapiens]
          Length = 846

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 63  LQELKKKIP--SREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWK 108
           ++EL   +P  +R++ KST +  +++ +RKH +    S A E+  +WK
Sbjct: 54  IKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWK 101


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,129,567
Number of Sequences: 37866
Number of extensions: 264050
Number of successful extensions: 1214
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1178
Number of HSP's gapped (non-prelim): 109
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.