Guide to the Human Genome
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Name: KIAA1826 Sequence: fasta or formatted (345aa) NCBI GI: 58761537
Description:

hypothetical protein LOC84437

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9         10           1
 C cysteine            0.3          1           1
 D aspartate           5.5         19           2
 E glutamate          16.5         57           5
 F phenylalanine       3.5         12           2
 G glycine             3.2         11           2
 H histidine           1.4          5           1
 I isoleucine          5.2         18           1
 K lysine              9.6         33           1
 L leucine            11.9         41           2
 M methionine          2.3          8           1
 N asparagine          3.8         13           1
 P proline             3.2         11           1
 Q glutamine           6.7         23           1
 R arginine            9.3         32           2
 S serine              5.5         19           2
 T threonine           3.5         12           2
 V valine              4.3         15           1
 W tryptophan          0.9          3           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84437 
LOC100289979          0.069   PREDICTED: hypothetical protein XP_002346878 
LOC100289273          0.069   PREDICTED: hypothetical protein XP_002342720 
CCDC88A               0.063   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.063   coiled-coil domain containing 88A isoform 1 
SLTM                  0.060   modulator of estrogen induced transcription isoform ...
SLTM                  0.060   modulator of estrogen induced transcription isoform ...
LOC440243             0.057   PREDICTED: Putative golgin subfamily A member 6-lik...
ENAH                  0.057   enabled homolog isoform a 
ENAH                  0.057   enabled homolog isoform b 
LOC283767             0.055   golgi autoantigen, golgin subfamily a-like 
CCDC88C               0.055   DVL-binding protein DAPLE 
LOC100133220          0.054   PREDICTED: hypothetical protein 
LOC647042             0.054   PREDICTED: hypothetical protein isoform 1 
LOC727832             0.052   golgi autoantigen, golgin subfamily a-like 
TCHH                  0.052   trichohyalin 
LOC283685             0.051   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC100132816          0.049   PREDICTED: similar to Putative golgin subfamily A m...
INCENP                0.049   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.049   inner centromere protein antigens 135/155kDa isofor...
SAFB2                 0.048   scaffold attachment factor B2 
LOC400352             0.046   PREDICTED: similar to Putative golgin subfamily A m...
CALD1                 0.046   caldesmon 1 isoform 1 
RAD50                 0.045   RAD50 homolog isoform 2 
RAD50                 0.045   RAD50 homolog isoform 1 
LOC283685             0.045   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC728636             0.045   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC645202             0.045   PREDICTED: hypothetical protein LOC645202 
LOC440295             0.045   hypothetical protein LOC440295 
LOC647042             0.045   PREDICTED: hypothetical protein isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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