Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ARHGAP5 Sequence: fasta or formatted (1502aa) NCBI GI: 71834863
Description:

Rho GTPase activating protein 5 isoform a

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [1501aa] Rho GTPase activating protein 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         73           3
 C cysteine            1.7         26           1
 D aspartate           6.8        102           3
 E glutamate           7.6        114           2
 F phenylalanine       4.5         68           3
 G glycine             3.7         55           2
 H histidine           3.0         45           1
 I isoleucine          5.9         89           2
 K lysine              8.3        125           3
 L leucine             9.1        137           3
 M methionine          1.7         26           2
 N asparagine          5.1         76           2
 P proline             5.9         89           4
 Q glutamine           5.0         75           2
 R arginine            4.7         71           3
 S serine              6.6         99           2
 T threonine           5.7         86           2
 V valine              5.8         87           2
 W tryptophan          0.6          9           1
 Y tyrosine            3.3         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.998   Rho GTPase activating protein 5 isoform b 
GRLF1                 0.477   glucocorticoid receptor DNA binding factor 1 
CHN1                  0.034   chimerin (chimaerin) 1 isoform a 
CHN1                  0.034   chimerin (chimaerin) 1 isoform b 
ARHGAP27              0.032   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.032   Rho GTPase activating protein 27 isoform a 
CHN2                  0.032   beta chimerin isoform 2 
CHN2                  0.032   beta chimerin isoform 1 
ARHGAP15              0.030   ARHGAP15 
ARHGAP12              0.029   Rho GTPase activating protein 12 
ABR                   0.026   active breakpoint cluster region-related  protein i...
ABR                   0.026   active breakpoint cluster region-related  protein is...
ABR                   0.026   active breakpoint cluster region-related  protein is...
RALBP1                0.026   ralA binding protein 1 
BCR                   0.025   breakpoint cluster region isoform 2 
BCR                   0.025   breakpoint cluster region isoform 1 
ARHGAP23              0.025   Rho GTPase activating protein 23 
ARHGAP24              0.025   Rho GTPase activating protein 24 isoform 1 
ARHGAP17              0.025   nadrin isoform 1 
ARHGAP17              0.025   nadrin isoform 2 
ARHGAP24              0.025   Rho GTPase activating protein 24 isoform 2 
ARHGAP4               0.025   Rho GTPase activating protein 4 
ARHGAP10              0.025   Rho GTPase activating protein 10 
ARHGAP24              0.025   Rho GTPase activating protein 24 isoform 3 
ARHGAP21              0.025   Rho GTPase activating protein 21 
SRGAP3                0.024   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP3                0.024   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
RICH2                 0.024   Rho GTPase-activating protein RICH2 
MYO9A                 0.024   myosin IXA 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press